Phosphatidylethanolamine Binding Protein

磷脂酰乙醇胺结合蛋白
  • 文章类型: Journal Article
    砷(As)是一种剧毒金属,是通过氧化应激和产生活性氧在癌症发展中的主要因素之一。先前的研究已经证明了褪黑激素作为自由基清除剂的潜力。Raf激酶抑制蛋白(RKIP)是细胞内信号传导途径的重要调节剂,已与各种类型的癌症有关。本研究的目的是探讨褪黑素抗氧化特性对砷暴露大鼠肝脏组织RKIP蛋白表达和抗氧化状态的影响。32只雄性Wistar大鼠分为四组,每组8只,包括控制,褪黑激素治疗(20毫克/公斤褪黑激素),亚砷酸钠处理(5.5mg/Kg亚砷酸钠),和褪黑激素+亚砷酸钠治疗组(组合)4周。Westernblot检测RKIP蛋白的表达水平,测定肝脏丙二醛(MDA)含量和抗氧化酶活性。使用单向ANOVA(P<0.05的显著性水平)和GraphPadPrism(9)软件分析数据。亚砷酸钠处理导致RKIP蛋白表达和抗氧化酶活性显著下降,和肝脏MDA水平增加(p<0.001)。相反,联合组褪黑素治疗导致RKIP蛋白表达和抗氧化酶活性显著增加,肝脏MDA水平降低(p<0.05)。提示褪黑素可以通过增强RKIP蛋白表达和抗氧化酶活性来减轻砷对肝细胞的氧化损伤。
    Arsenic (As) is a highly toxic metal and one of the main factors in cancer development through oxidative stress and production of reactive oxygen species. Prior research has demonstrated melatonin\'s potential as a free radical scavenger. Raf kinase inhibitory protein (RKIP) is an important regulator of intracellular signaling pathways that has been linked to various types of cancer. The aim of this research was to explore the influence of melatonin\'s antioxidant properties on the expression of the protein RKIP and the antioxidant status of liver tissue in rats that were exposed to arsenic. Thirty two male Wistar rats were divided into four groups of eight, including control, melatonin-treated (20 mg/Kg of melatonin), sodium arsenite-treated (5.5 mg/Kg of sodium arsenite), and melatonin + sodium arsenite-treated groups (combination) for 4 weeks. The expression level of protein RKIP was measured by Western blot, and malondialdehyde (MDA) content of the liver as well as the activities of antioxidant enzymes were measured. The data analyzed using one-way ANOVA (significance level of p < 0.05) and GraphPad Prism (9) software. Sodium arsenite treatment led to a significant decrease in RKIP protein expression and antioxidant enzyme activity, and an increase in liver MDA levels (p < 0.001). Conversely, melatonin treatment in the combination group resulted in a significant increase in RKIP protein expression and antioxidant enzyme activity and a decrease in liver MDA levels (p < 0.05). These findings suggest that melatonin can attenuate oxidative damage caused by arsenic in liver cells by enhancing RKIP protein expression and antioxidant enzyme activity.
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  • 文章类型: Journal Article
    种子休眠对于最佳的植物生命周期时间至关重要。然而,驯化在很大程度上减少了现代谷物品种的种子休眠,导致诸如收获前发芽(PHS)以及随后的产量和质量下降等挑战。因此,为了开发抗PHS品种,必须阐明控制种子休眠的分子机制。在这项研究中,我们筛选了一个降低种子休眠的BASICHELIX-LOOP-HELIX转录因子4(OsbHLH004)突变体,并揭示了OsbHLH004直接调节9-顺式-环氧碳素类二氧嘧啶3(OsNCED3)和GIBBERELLIN2-OXIDASE6(Os2oxza)水稻此外,我们确定了两种磷脂酰乙醇胺结合蛋白,FT和TFL1和2的母亲(OsMFT1和OsMFT2;以下简称OsMFT1/2)与OsbHLH004和理想植物结构1(IPA1)相互作用,以调节它们对OsNCED3和OsGA2ox6的结合能力,从而促进种子休眠。有趣的是,FT-相互作用蛋白1(OsFTIP1)与OsMFT1/2相互作用并影响它们的核质易位进入细胞核,其中OsMFT1/2-OsbHLH004和OsMFT1/2-IPA1拮抗调节OsNCED3和OsGA2ox6的表达。我们的发现揭示了OsFTIP1介导的OsMFT1/2-OsbHLH004和OsMFT1/2-IPA1复合物对OsNCED3和OsGA2ox6的动态转录调控在水稻种子休眠中的作用。
    Seed dormancy is crucial for optimal plant life-cycle timing. However, domestication has largely diminished seed dormancy in modern cereal cultivars, leading to challenges such as preharvest sprouting (PHS) and subsequent declines in yield and quality. Therefore, it is imperative to unravel the molecular mechanisms governing seed dormancy for the development of PHS-resistant varieties. In this study, we screened a mutant of BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR4 (OsbHLH004) with decreased seed dormancy and revealed that OsbHLH004 directly regulates the expression of 9-CIS-EPOXYCAROTENOID DIOXYGENASE3 (OsNCED3) and GIBBERELLIN 2-OXIDASE6 (OsGA2ox6) in rice (Oryza sativa). Additionally, we determined that two phosphatidylethanolamine-binding proteins, MOTHER OF FT AND TFL1 and 2 (OsMFT1 and OsMFT2; hereafter OsMFT1/2) interact with OsbHLH004 and Ideal Plant Architecture 1 (IPA1) to regulate their binding capacities on OsNCED3 and OsGA2ox6, thereby promoting seed dormancy. Intriguingly, FT-INTERACTING PROTEIN1 (OsFTIP1) interacts with OsMFT1/2 and affects their nucleocytoplasmic translocation into the nucleus, where OsMFT1/2-OsbHLH004 and OsMFT1/2-IPA1 antagonistically modulate the expression of OsNCED3 and OsGA2ox6. Our findings reveal that OsFTIP1-mediated inhibition of nuclear translocation of OsMFT1/2 and the dynamic transcriptional modulation of OsNCED3 and OsGA2ox6 by OsMFT1/2-OsbHLH004 and OsMFT1/2-IPA1 complexes in seed dormancy in rice.
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  • 文章类型: Journal Article
    视网膜母细胞瘤是儿童最常见的眼部恶性肿瘤之一。Bmi-1,转录抑制因子的Polycomb组家族的成员,在多种肿瘤中表达。我们的研究目的是探讨Bmi-1在视网膜母细胞瘤中的作用。RT-qPCR和蛋白质印迹用于计算Bmi-1和RKIP的mRNA和蛋白质水平。MTT,进行伤口愈合和Transwell测定以测量增殖,视网膜母细胞瘤细胞的迁移和侵袭。流式细胞术检测细胞凋亡。在裸鼠中检测移植肿瘤的体积和质量。Bmi-1过度表达,RKIP在视网膜母细胞瘤细胞中低表达。Bmi-1促进细胞增殖,Y79和SO-RB50细胞的迁移和侵袭以及抑制细胞凋亡。Bmi-1的下调和RKIP的过表达抑制细胞增殖,移民和入侵,细胞凋亡增加。视网膜母细胞瘤细胞Bmi-1敲低的功能被RKIP敲低阻断,但由RKIP推广。下调的Bmi-1抑制异种移植肿瘤生长,RKIP加剧了这种抑制作用。Bmi-1是提高视网膜母细胞瘤临床治疗效果的潜在治疗靶点。所有发现都揭示了Bmi-1/RKIP轴在视网膜母细胞瘤肿瘤发生中的作用。
    Retinoblastoma is one of the most common ocular malignancies in children. Bmi-1, a member of the Polycomb group family of transcriptional repressors, is expressed in a variety of tumors. The purpose of our study was to explore the role of Bmi-1 in retinoblastoma. RT-qPCR and western blot were used for calculating the mRNA and protein levels of Bmi-1 and RKIP. MTT, Wound healing and Transwell assays were performed to measure the proliferation, migration and invasion in retinoblastoma cells. Cell apoptosis was detected by flow cytometry. The volume and mass of transplanted tumors were detected in nude mice. Bmi-1 was over expressed, and RKIP was low expressed in retinoblastoma cells. Bmi-1 promoted cell proliferation, migration and invasion and suppressed cell apoptosis of Y79 and SO-RB50 cells. Downregulation of Bmi-1 and overexpression of RKIP inhibited cell proliferation, migration and invasion, and increased cell apoptosis. The functions of Bmi-1 knockdown on retinoblastoma cells were blocked by RKIP knockdown, but promoted by RKIP. Down-regulated Bmi-1 inhibited xenograft tumor growth, and RKIP exacerbated this inhibitory effect. Bmi-1 served as a potential therapeutic target for improving the efficacy of clinical treatment in retinoblastoma. All the findings revealed the functions of Bmi-1/RKIP axis in retinoblastoma tumorigenesis.
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  • 文章类型: Journal Article
    癌症免疫疗法的创新导致了几种可以破坏免疫抑制的新型免疫治疗策略的发展。一个关键的进步在于免疫检查点抑制剂(ICIs)。在患有各种治疗抗性癌症的患者中显示出显著的临床疗效和提高的生存率。这种免疫干预由针对抑制性受体的单克隆抗体组成(例如,PD-1)对细胞毒性CD8T细胞或针对相应的配体(例如,PD-L1/PD-L2)在肿瘤微环境(TME)中的癌细胞和其他细胞上过表达。然而,不是所有的癌细胞都有反应-临床反应仍然很差,免疫相关的不良反应,自适应阻力,以及一部分癌症患者对ICI的脆弱性。这一挑战展示了癌症的异质性,强调许多患者存在额外的免疫调节机制。因此,研究PD-L1与其他致癌基因和通路的相互作用对于进一步推进靶向治疗和解决耐药机制至关重要。因此,我们的目的是研究肿瘤细胞中PD-L1表达的机制,鉴于其与免疫逃避的相关性,揭示减少PD-L1表达和恢复抗肿瘤免疫反应的新机制。许多研究表明,许多癌症中Raf激酶抑制蛋白(RKIP)的上调有助于抑制恶性细胞中观察到的关键过度活跃途径。除了其在免疫应答和TME调节中的广泛参与。我们,因此,假设PD-L1在癌症免疫监视中的作用可能与肿瘤抑制因子Raf激酶抑制蛋白(RKIP)在癌细胞中的低表达水平成反比。研究了这一假设,我们发现了RKIP和PD-L1表达调控之间的几种信号串扰途径。这些途径和调节因子包括MAPK和JAK/STAT途径,GSK3β,细胞因子IFN-γ和IL-1β,Sox2和转录因子YY1和NFκB。上调PD-L1的途径抑制RKIP表达,反之亦然。在各种人类癌症中的生物信息学分析证明了PD-L1和RKIP表达之间的负相关关系及其预后作用。因此,我们怀疑RKIP的直接上调和/或靶向RKIP诱导剂与ICIs的联合使用可能导致更有针对性的抗肿瘤免疫反应-解决与PD-1/PD-L1单药治疗相关的治疗挑战.
    Innovations in cancer immunotherapy have resulted in the development of several novel immunotherapeutic strategies that can disrupt immunosuppression. One key advancement lies in immune checkpoint inhibitors (ICIs), which have shown significant clinical efficacy and increased survival rates in patients with various therapy-resistant cancers. This immune intervention consists of monoclonal antibodies directed against inhibitory receptors (e.g., PD-1) on cytotoxic CD8 T cells or against corresponding ligands (e.g., PD-L1/PD-L2) overexpressed on cancer cells and other cells in the tumor microenvironment (TME). However, not all cancer cells respond-there are still poor clinical responses, immune-related adverse effects, adaptive resistance, and vulnerability to ICIs in a subset of patients with cancer. This challenge showcases the heterogeneity of cancer, emphasizing the existence of additional immunoregulatory mechanisms in many patients. Therefore, it is essential to investigate PD-L1\'s interaction with other oncogenic genes and pathways to further advance targeted therapies and address resistance mechanisms. Accordingly, our aim was to investigate the mechanisms governing PD-L1 expression in tumor cells, given its correlation with immune evasion, to uncover novel mechanisms for decreasing PD-L1 expression and restoring anti-tumor immune responses. Numerous studies have demonstrated that the upregulation of Raf Kinase Inhibitor Protein (RKIP) in many cancers contributes to the suppression of key hyperactive pathways observed in malignant cells, alongside its broadening involvement in immune responses and the modulation of the TME. We, therefore, hypothesized that the role of PD-L1 in cancer immune surveillance may be inversely correlated with the low expression level of the tumor suppressor Raf Kinase Inhibitor Protein (RKIP) expression in cancer cells. This hypothesis was investigated and we found several signaling cross-talk pathways between the regulations of both RKIP and PD-L1 expressions. These pathways and regulatory factors include the MAPK and JAK/STAT pathways, GSK3β, cytokines IFN-γ and IL-1β, Sox2, and transcription factors YY1 and NFκB. The pathways that upregulated PD-L1 were inhibitory for RKIP expression and vice versa. Bioinformatic analyses in various human cancers demonstrated the inverse relationship between PD-L1 and RKIP expressions and their prognostic roles. Therefore, we suspect that the direct upregulation of RKIP and/or the use of targeted RKIP inducers in combination with ICIs could result in a more targeted anti-tumor immune response-addressing the therapeutic challenges related to PD-1/PD-L1 monotherapy alone.
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  • 文章类型: Journal Article
    背景:脓毒症相关性脑病(SAE)是指由脓毒症介导的非中枢神经系统感染引起的广泛的脑功能损害。脂质过氧化诱导的铁死亡有助于SAE的发生和过程。本研究旨在探讨SAE中脂质过氧化诱导的铁凋亡与神经元损伤的关系。
    方法:收集儿科患者入院时的基线数据,监测SAE患者和SAE模型小鼠的血清和外周血单个核细胞(PBMC)中与脂质过氧化和铁凋亡相关的各种标志物的表达水平。评估了海马磷脂酰乙醇胺结合蛋白(PEBP)-1/15-赖氨酸氧化酶(LOX)/谷胱甘肽过氧化物酶4(GPX4)途径对SAE治疗中铁凋亡抑制作用的作用。
    结果:结果显示S100钙结合蛋白β(S-100β)水平升高,胶质纤维酸性蛋白,SAE患者血清中的丙二醛,而超氧化物歧化酶水平降低。此外,PBMC分析显示PEBP1、LOX、和SAE患者的长链脂酰辅酶A合成酶家族成员4(ACSL4),而GPX4和胱氨酸/谷氨酸转运体xCT(SLC7A11)的转录水平降低。与对照组相比,SAE小鼠海马中S-100β和神经元特异性烯醇化酶(NSE)的表达增加,而去铁胺(DFO)小鼠中S-100β和NSE的表达降低。此外,在SAE小鼠的海马中观察到铁积累,而DFO小鼠的铁离子水平降低。铁凋亡的抑制减轻了线粒体损伤(通过透射电子显微镜评估,海马线粒体ATP检测,和海马中JC-1聚合物与单体的比例)和SAE诱导的氧化应激反应以及减弱的神经炎性反应。进一步的研究表明,SAE治疗中铁死亡抑制作用的潜在机制与海马PEBP-1/15-LOX/GPX4途径有关。
    结论:这些结果为SAE中神经元损伤的管理提供了潜在的治疗靶点,并对神经系统疾病中铁死亡的潜在机制提供了有价值的见解。
    BACKGROUND: Sepsis-associated encephalopathy (SAE) refers to the widespread impairment of brain function caused by noncentral nervous system infection mediated by sepsis. Lipid peroxidation-induced ferroptosis contributes to the occurrence and course of SAE. This study aimed to investigate the relationship between neuronal injury and lipid peroxidation-induced ferroptosis in SAE.
    METHODS: Baseline data were collected from pediatric patients upon admission, and the expression levels of various markers related to lipid peroxidation and ferroptosis were monitored in the serum and peripheral blood mononuclear cells (PBMCs) of patients with SAE as well as SAE model mice. The hippocampal phosphatidylethanolamine-binding protein (PEBP)-1/15-lysine oxidase (LOX)/ glutathione peroxidase 4 (GPX4) pathway was assessed for its role on the inhibitory effect of ferroptosis in SAE treatment.
    RESULTS: The results showed elevated levels of S100 calcium-binding protein beta (S-100β), glial fibrillary acidic protein, and malondialdehyde in the serum of SAE patients, while superoxide dismutase levels were reduced. Furthermore, analysis of PBMCs revealed increased transcription levels of PEBP1, LOX, and long-chain fatty acyl-CoA synthetase family member 4 (ACSL4) in SAE patients, while the transcription levels of GPX4 and cystine/glutamate transporter xCT (SLC7A11) were decreased. In comparison to the control group, the SAE mice exhibited increased expression of S-100β and neuron-specific enolase (NSE) in the hippocampus, whereas the expression of S-100β and NSE were reduced in deferoxamine (DFO) mice. Additionally, iron accumulation was observed in the hippocampus of SAE mice, while the iron ion levels were reduced in the DFO mice. Inhibition of ferroptosis alleviated the mitochondrial damage (as assessed by transmission electron microscopy, hippocampal mitochondrial ATP detection, and the JC-1 polymer-to-monomer ratio in the hippocampus) and the oxidative stress response induced by SAE as well as attenuated neuroinflammatory reactions. Further investigations revealed that the mechanism underlying the inhibitory effect of ferroptosis in SAE treatment is associated with the hippocampal PEBP-1/15-LOX/GPX4 pathway.
    CONCLUSIONS: These results offer potential therapeutic targets for the management of neuronal injury in SAE and valuable insights into the potential mechanisms of ferroptosis in neurological disorders.
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  • 文章类型: Journal Article
    植物生活史由两个转变决定,发芽和开花时间,其中磷脂酰乙醇胺结合蛋白(PEBP)花斑T(FT)和末端花1(TFL1)起着关键的调节作用。与高度保守的TFL1类相比,FT样基因在裸子植物和被子植物的单子叶植物中的拷贝数显着变化,而在eudicots中可以观察到零星的重复。这里,通过对被子植物中PEBP的系统分析,特别关注十二种具有Lamiales顺序中高质量基因组的代表性物种,我们在核心Lamiales家族中发现了FT样基因的连续谱系特异性但系统的扩增。第一个扩增事件主要通过核心-Lamiales特异性全基因组复制(cL-WGD)产生FT1样,而另一方面,可能的随机重复在包含玄参科和其余核心拉米的谱系中产生了FT2样。FT1-和FT2-样基因在一些家族中进一步串联扩增。这些扩展的FT-like具有高度不同的表达模式和结构变化,表明功能多样化。有趣的是,一些核心Lamiales包含FT和TFL1样2(MFT2)的残存母亲,可能在被子植物的共同祖先中扩展。我们的数据展示了FT样基因的高度动态谱系特异性扩增,因此,提供了重要的和新的进化见解,以支持拉米耶斯开花时间多样性的基因调控网络,更普遍的是,被子植物。
    Plant life history is determined by two transitions, germination and flowering time, in which the phosphatidylethanolamine-binding proteins (PEBPs) FLOWERING LOCUS T (FT) and TERMINAL FLOWER1 (TFL1) play key regulatory roles. Compared with the highly conserved TFL1-like genes, FT-like genes vary significantly in copy numbers in gymnosperms, and monocots within the angiosperms, while sporadic duplications can be observed in eudicots. Here, via a systematic analysis of the PEBPs in angiosperms with a special focus on 12 representative species featuring high-quality genomes in the order Lamiales, we identified a successive lineage-specific but systematic expansion of FT-like genes in the families of core Lamiales. The first expansion event generated FT1-like genes mainly via a core Lamiales-specific whole-genome duplication (cL-WGD), while a likely random duplication produced the FT2-like genes in the lineages containing Scrophulariaceae and the rest of the core Lamiales. Both FT1- and FT2-like genes were further amplified tandemly in some families. These expanded FT-like genes featured highly diverged expression patterns and structural variation, indicating functional diversification. Intriguingly, some core Lamiales contained the relict MOTHER OF FT AND TFL1 like 2 (MFT2) that probably expanded in the common ancestor of angiosperms. Our data showcase the highly dynamic lineage-specific expansion of the FT-like genes, and thus provide important and fresh evolutionary insights into the gene regulatory network underpinning flowering time diversity in Lamiales and, more generally, in angiosperms.
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  • 文章类型: Journal Article
    目的:Raf激酶抑制蛋白(RKIP)在平滑肌瘤不同亚型中的表达模式如何(普通型,细胞,中风或出血性平滑肌瘤,具有奇异核的平滑肌瘤和脂肪平滑肌瘤)和平滑肌肉瘤标本,
    方法:对平滑肌瘤和平滑肌肉瘤标本进行免疫组化染色。平滑肌肉瘤SK-LMS-1细胞系被RKIP敲除,RKIP过表达,和细胞活力,进行了伤口愈合迁移和克隆形成试验。
    结果:在奇异平滑肌瘤中观察到较高的RKIP免疫组织化学表达,比普通型平滑肌瘤。在细胞平滑肌瘤中也发现表达降低,在平滑肌肉瘤中通常没有染色。在SK-LMS-1细胞系中进行RKIP表达操作后,随着时间的推移,细胞活力和迁移能力没有观察到重大差异。RKIP淘汰赛,然而,导致细胞形成集落的能力显着增加(P=0.011)。
    结论:RKIP在平滑肌瘤组织型和平滑肌肉瘤中不同的表达模式,以及它对平滑肌肉瘤细胞集落形成的影响,鼓励RKIP在子宫平滑肌疾病中的进一步研究。
    OBJECTIVE: What is the expression pattern of Raf kinase inhibitory protein (RKIP) in different subtypes of leiomyoma (usual type, cellular, apoplectic or haemorrhagic leiomyoma, leiomyoma with bizarre nuclei and lipoleiomyoma) and leiomyosarcoma specimens, and what is its biological role in leiomyosarcoma cells?
    METHODS: Leiomyoma and leiomyosarcoma specimens underwent immunohistochemistry staining. Leiomyosarcoma SK-LMS-1 cell line was RKIP knocked down and RKIP overexpressed, and cell viability, wound healing migration and clonogenicity assays were carried out.
    RESULTS: A higher immunohistochemical expression of RKIP was observed in bizarre leiomyomas, than in usual-type leiomyomas. Decreased expression was also found in cellular leiomyoma, with generally absent staining in leiomyosarcomas. Upon RKIP expression manipulation in SK-LMS-1 cell line, no major differences were observed in cell viability and migration capacity over time. RKIP knockout, however, resulted in a significant increase in the cell\'s ability to form colonies (P = 0.011).
    CONCLUSIONS: RKIP distinct expression pattern among leiomyoma histotype and leiomyosarcoma, and its effect on leiomyosarcoma cells on colony formation, encourages further studies of RKIP in uterine smooth muscle disorders.
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  • 文章类型: Journal Article
    植物本质上是无柄的,因此,它们已经进化到感知季节性和周围环境的变化,适应这些变化。一个典型的例子是调节被子植物的开花时间,这是由两种蛋白质的协调作用精确定时的:花斑T(FT),和终端花1(TFL1)。两种调节子都是磷脂二乙醇胺结合蛋白(PEBP)蛋白家族成员。这些调节蛋白不与DNA本身相互作用,而是与转录调节因子相互作用,如花斑D(FD)。FT和TFL1最初被确定为通过与FD结合起作用的开花时间的关键调节剂,然而PEBP家族成员也参与塑造植物结构和发育。接下来,PEBP可以与TCP转录调节因子相互作用,例如叶黄素分枝1(TB1),在许多作物中,植物结构和关键驯化相关基因的众所周知的调节剂。这里,我们回顾了PEBP蛋白在开花时间中的作用,植物建筑和发展。由于这些也是关键的产量相关性状,我们将突出迷人的例子,从模式植物拟南芥以及重要的食品和饲料作物,如,大米,大麦,小麦,番茄,还有土豆.
    Plants are sessile by nature, and as such they have evolved to sense changes in seasonality and their surrounding environment, and adapt to these changes. One prime example of this is the regulation of flowering time in angiosperms, which is precisely timed by the coordinated action of two proteins: FLOWERING LOCUS T (FT) and TERMINAL FLOWER 1 (TFL1). Both of these regulators are members of the PHOSPHATIDYLETHANOLAMINE BINDING PROTEIN (PEBP) family of proteins. These regulatory proteins do not interact with DNA themselves, but instead interact with transcriptional regulators, such as FLOWERING LOCUS D (FD). FT and TFL1 were initially identified as key regulators of flowering time, acting through binding with FD; however, PEBP family members are also involved in shaping plant architecture and development. In addition, PEBPs can interact with TCP transcriptional regulators, such as TEOSINTE BRANCHED 1 (TB1), a well-known regulator of plant architecture, and key domestication-related genes in many crops. Here, we review the role of PEBPs in flowering time, plant architecture, and development. As these are also key yield-related traits, we highlight examples from the model plant Arabidopsis as well as important food and feed crops such as, rice, barley, wheat, tomato, and potato.
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  • 文章类型: Journal Article
    背景:肿瘤抑制基因的启动子甲基化已被证明是其表观遗传调控的主要机制之一。我们研究了PEBP1的启动子甲基化状态,并评估了其与胆囊癌变的相关性。
    目的:PEBP1,Raf/MEK/ERK信号通路的内源性抑制剂,是一种肿瘤抑制基因.我们旨在研究PEBP1的表达谱,了解其在胆囊癌中的失调机制和意义。
    方法:用RT-PCR和MS-PCR方法检测了77例胆囊癌(GBC)和28例胆结石患者的组织活检组织中PEBP1的表达分析及其启动子甲基化状态。分别。
    结果:我们的mRNA表达谱结果表明,PEBP1在62.3%(48/77)中下调,与胆结石疾病的组织样本相比,31.2%(24/77)的胆囊癌活检没有显着变化,而6.5%(5/77)的表达上调。在GBC,与仅在3个(10.7%)样品中显示启动子超甲基化的来自胆结石疾病的组织样品相比,48.1%(N=37)的GBC活检样品显示显著杂合启动子超甲基化。在胆囊癌中,PEBP1甲基化与淋巴结转移和较短的生存期显著相关。
    结论:PEBP1在胆囊癌中经常下调和高甲基化,其启动子高甲基化是GBC中常见的早期失活机制。
    BACKGROUND: Promoter hypermethylation of tumor suppressor genes has been demonstrated to be one of the major mechanisms of their epigenetic regulation in various reports. We have studied the promoter methylation status of PEBP1 and evaluated its correlation with gallbladder carcinogenesis.
    OBJECTIVE: PEBP1, an endogenous inhibitor of Raf/MEK/ERK signaling pathway, is a tumor suppressor gene. We aimed to study the expression profile of PEBP1 and understand the mechanism and significance of its deregulation in gallbladder cancer.
    METHODS: PEBP1 expression analysis and its promoter methylation status were investigated in 77 gallbladder carcinoma (GBC) and tissue biopsies from 28 patients of gallstone disease by RT-PCR and MS-PCR, respectively.
    RESULTS: Our results of the mRNA expression profiling demonstrate that PEBP1 is down-regulated in 62.3% (48/77), while 31.2% (24/77) of the gallbladder cancer biopsies show no significant change and 6.5% (5/77) show up-regulated expression compared to tissue samples of gallstone diseases. In GBC, 48.1% (N = 37) GBC biopsy samples exhibited significantly heterozygous promoter hypermethylation compared to tissue samples from gallstone diseases which show promoter hypermethylation in 3 (10.7%) samples only. In gallbladder cancer, the PEBP1 methylation is significantly associated with lymph node metastasis and shorter period of survival.
    CONCLUSIONS: PEBP1 is frequently down-regulated and hypermethylated in gallbladder cancer and its promoter hypermethylation is a frequent and early inactivating mechanism in GBC.
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  • 文章类型: Journal Article
    Cw豆(Vignaunguiculata(L.)Walp)是世界上干旱和半干旱地区广泛种植的主要豆类粮食作物之一。cw豆的确定习性比不确定的习性具有许多优势,并且非常适合现代农业系统。诱变育种是开发cw豆决定习性的活跃研究领域。本研究旨在在局部适应良好的遗传背景下开发新的具有末端开花(TFL)的决定性习性突变体。因此,用伽马射线剂量(200、250和,300Gy),M1种群增长。从M1后代产生M2群体,并将来自M2代(200Gy)的选择的确定突变体(TFLCM-1和TFLCM-2)转发至M5代以表征突变体,同时将它们与P152杂交以开发MutMap群体。在M5一代中,通过评估TFL生长习性来表征确定的突变体(80-81天),更长的花梗(30.75-31.45厘米),直立吊舱(160°-200°),每个集群的吊舱数量(4-5个),和早期成熟。Further,在确定的突变体和MutMap群体中的VuTFL1基因的测序分析揭示了在磷脂酰乙醇胺结合蛋白(PEBP)的第四外显子中的单核苷酸移位(在1196bp处的A-T)和在第143位置处的天冬酰胺(N)至酪氨酸(Y)氨基酸改变。值得注意的是,在突变品系中观察到PEPB的功能丧失以及反平行β折叠的更高置信水平修饰和蛋白质二级结构的不稳定。实时定量PCR(qRT-PCR)分析表明,在TFL突变体中,VuTFL1基因在开花期下调。总的来说,从这项研究中获得的见解肯定了诱导突变在改变植物的理想型中的有效性。在这项研究中开发的TFL突变体有可能成为未来cw豆育种计划中培育确定性状的宝贵资源,并为机械收获铺平道路。
    Cowpea (Vigna unguiculata (L.) Walp) is one of the major food legume crops grown extensively in arid and semi-arid regions of the world. The determinate habit of cowpea has many advantages over the indeterminate and is well adapted to modern farming systems. Mutation breeding is an active research area to develop the determinate habit of cowpea. The present study aimed to develop new determinate habit mutants with terminal flowering (TFL) in locally well-adapted genetic backgrounds. Consequently, the seeds of popular cowpea cv P152 were irradiated with doses of gamma rays (200, 250, and, 300 Gy), and the M1 populations were grown. The M2 populations were produced from the M1 progenies and selected determinate mutants (TFLCM-1 and TFLCM-2) from the M2 generation (200 Gy) were forwarded up to the M5 generation to characterize the mutants and simultaneously they were crossed with P152 to develop a MutMap population. In the M5 generation, determinate mutants (80-81 days) were characterized by evaluating the TFL growth habit, longer peduncles (30.75-31.45 cm), erect pods (160°- 200°), number of pods per cluster (4-5 nos.), and early maturity. Further, sequencing analysis of the VuTFL1 gene in the determinate mutants and MutMap population revealed a single nucleotide transversion (A-T at 1196 bp) in the fourth exon and asparagine (N) to tyrosine (Y) amino acid change at the 143rd position of phosphatidylethanolamine-binding protein (PEBP). Notably, the loss of function PEPB with a higher confidence level modification of anti-parallel beta-sheets and destabilization of the protein secondary structure was observed in the mutant lines. Quantitative real-time PCR (qRT-PCR) analysis showed that the VuTFL1 gene was downregulated at the flowering stage in TFL mutants. Collectively, the insights garnered from this study affirm the effectiveness of induced mutation in modifying the plant\'s ideotype. The TFL mutants developed during this investigation have the potential to serve as a valuable resource for fostering determinate traits in future cowpea breeding programs and pave the way for mechanical harvesting.
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