Patient-specific modeling

特定于患者的建模
  • 文章类型: Journal Article
    在过去的20年中,正颌手术取得了实质性进展,在3D技术的发展推动下。这些提高了可预测性和准确性,简化了手术计划.这种转型转变引入了患者特定的植入物(PSI)和切割导向器,作为传统技术的可行替代方案。提高外科手术的整体有效性。然而,这种硬件的采用与广泛的切口和方法的要求有关,尤其是上颌骨.解决这一限制,本论文介绍了一种创新的切割指南设计,该设计有助于LeFortI截骨术的微创方法。
    There has been substantial progress in orthognathic surgery over the last 20 years, propelled by developments in 3D technology. These have led to enhanced predictability and precision, and simplified surgical planning. This transformative shift has introduced patient-specific implants (PSI) and cutting guides as viable alternatives to conventional techniques, elevating the overall effectiveness of surgical procedures. Nevertheless, the adoption of such hardware has been linked to the requirement for extensive incisions and approaches, particularly in the maxilla. Addressing this limitation, the current paper introduces an innovative cutting guide design that facilitates a minimally invasive approach to Le Fort I osteotomy.
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  • 文章类型: Journal Article
    背景:个性化建模是改善腹主动脉瘤(AAA)破裂风险评估的有前途的工具。计算机断层扫描(CT)和定量流量(Q流)磁共振成像(MRI)被广泛认为是获取患者特定几何形状和速度曲线的金标准,分别。然而,它们的频繁使用受到各种缺点的阻碍。超声在当前的临床实践中被广泛使用,并提供了一种安全的,快速和成本有效的方法来获取患者特定的几何形状和速度曲线。本研究旨在从多普勒超声中提取和验证患者特定的速度曲线,并检查速度曲线对计算血液动力学的影响。
    方法:成功获得了6名志愿者和7名患者的脉冲波多普勒(PWD)和彩色多普勒(CD)数据,并用于提取横截面上的血流脉冲和速度曲线。分别。将美国流量脉冲和速度曲线以及通用的Womersley曲线与MRI速度和流量进行了比较。此外,进行CFD模拟以检查速度分布和流动脉冲的组合影响。
    结果:在横截面上,在US和MRI速度分布之间发现了很大的差异,美国的差异与Womersley配置文件的差异范围相同。流量脉冲的差异表明,US通常在最大流量方面表现最佳,正向流动和正向流动与反向流动之间的比率,而它往往高估了倒流。规定的速度边界条件对计算的血液动力学的空间模式和大小都有很大影响。与志愿者相比,在美国和普通CFD病例之间观察到更大的误差和更小的差异。
    结论:这些结果表明,从PWD数据获取患者特定流量脉冲是可行的,前提是PWD采集可以在动脉瘤区域附近进行,并导致三相流动模式。然而,使用CD数据获得横截面上的患者特定速度分布并不可靠。对于志愿者来说,利用美国流量剖面而不是通用流量剖面通常会提高性能,而超过一半的患者就是这种情况。
    BACKGROUND: Personalized modeling is a promising tool to improve abdominal aortic aneurysm (AAA) rupture risk assessment. Computed tomography (CT) and quantitative flow (Q-flow) magnetic resonance imaging (MRI) are widely regarded as the gold standard for acquiring patient-specific geometry and velocity profiles, respectively. However, their frequent utilization is hindered by various drawbacks. Ultrasound is used extensively in current clinical practice and offers a safe, rapid and cost-effective method to acquire patient-specific geometries and velocity profiles. This study aims to extract and validate patient-specific velocity profiles from Doppler ultrasound and to examine the impact of the velocity profiles on computed hemodynamics.
    METHODS: Pulsed-wave Doppler (PWD) and color Doppler (CD) data were successfully obtained for six volunteers and seven patients and employed to extract the flow pulse and velocity profile over the cross-section, respectively. The US flow pulses and velocity profiles as well as generic Womersley profiles were compared to the MRI velocities and flows. Additionally, CFD simulations were performed to examine the combined impact of the velocity profile and flow pulse.
    RESULTS: Large discrepancies were found between the US and MRI velocity profiles over the cross-sections, with differences for US in the same range as for the Womersley profile. Differences in flow pulses revealed that US generally performs best in terms of maximum flow, forward flow and ratios between forward and backward flow, whereas it often overestimates the backward flow. Both spatial patterns and magnitude of the computed hemodynamics were considerably affected by the prescribed velocity boundary conditions. Larger errors and smaller differences between the US and generic CFD cases were observed for patients compared to volunteers.
    CONCLUSIONS: These results show that it is feasible to acquire the patient-specific flow pulse from PWD data, provided that the PWD acquisition could be performed proximal to the aneurysm region, and resulted in a triphasic flow pattern. However, obtaining the patient-specific velocity profile over the cross-section using CD data is not reliable. For the volunteers, utilizing the US flow profile instead of the generic flow profile generally resulted in improved performance, whereas this was the case in more than half of the cases for the patients.
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  • 文章类型: Journal Article
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  • 文章类型: Journal Article
    背景:通过计算机断层扫描(CT)成像和3D打印技术对患者解剖结构进行计算机辅助建模和设计(CAM/CAD),可用于手术指导的患者特定解剖模型。这些模型与更好的患者预后相关;然而,缺乏CT成像指南的风险是捕获不适合患者特定建模的成像.本研究旨在探讨CT图像像素大小(X-Y)和切片厚度(Z)如何影响下颌模型的准确性。
    方法:以不同的切片厚度和像素大小对六个尸体头部进行CT扫描,每次扫描都将其转换为下颌骨的CAD模型。然后解剖尸体下颌骨并进行表面扫描,制作真实解剖的CAD模型,用作数字比较的黄金标准。这些比较的均方根(RMS)值,并使用偏离真实尸体解剖结构超过2.00mm的点的百分比来评估准确性。使用双向ANOVA和Tukey-Kramer事后检验来确定准确性的显着差异。
    结果:双向方差分析显示,切片厚度的RMS存在显着差异,而像素尺寸则没有差异,而事后测试显示,像素尺寸仅在0.32mm和1.32mm之间存在显着差异。对于切片厚度,事后测试显示,对于切片厚度为0.67mm的扫描,RMS值明显较小,1.25mm,与切片厚度为5.00毫米的那些相比,还有3.00毫米。在0.67mm之间没有发现显着差异,1.25mm,和3.00毫米的切片厚度。偏离尸体解剖结构大于2.00mm的点的百分比与RMS的结果一致,除了在事后测试中比较像素大小为0.75mm和0.818mm与1.32mm时,这也显示出显著的差异。
    结论:这项研究表明,与像素大小相比,切片厚度对3D模型精度的影响更大,为支持切片厚度严格标准的指南提供客观验证,同时推荐各向同性体素。此外,我们的结果表明,CT扫描层厚达3.00毫米可以为面部骨解剖提供足够的3D模型,比如下颌骨,取决于临床适应症。
    BACKGROUND: Computer-aided modeling and design (CAM/CAD) of patient anatomy from computed tomography (CT) imaging and 3D printing technology enable the creation of tangible, patient-specific anatomic models that can be used for surgical guidance. These models have been associated with better patient outcomes; however, a lack of CT imaging guidelines risks the capture of unsuitable imaging for patient-specific modeling. This study aims to investigate how CT image pixel size (X-Y) and slice thickness (Z) impact the accuracy of mandibular models.
    METHODS: Six cadaver heads were CT scanned at varying slice thicknesses and pixel sizes and turned into CAD models of the mandible for each scan. The cadaveric mandibles were then dissected and surface scanned, producing a CAD model of the true anatomy to be used as the gold standard for digital comparison. The root mean square (RMS) value of these comparisons, and the percentage of points that deviated from the true cadaveric anatomy by over 2.00 mm were used to evaluate accuracy. Two-way ANOVA and Tukey-Kramer post-hoc tests were used to determine significant differences in accuracy.
    RESULTS: Two-way ANOVA demonstrated significant difference in RMS for slice thickness but not pixel size while post-hoc testing showed a significant difference in pixel size only between pixels of 0.32 mm and 1.32 mm. For slice thickness, post-hoc testing revealed significantly smaller RMS values for scans with slice thicknesses of 0.67 mm, 1.25 mm, and 3.00 mm compared to those with a slice thickness of 5.00 mm. No significant differences were found between 0.67 mm, 1.25 mm, and 3.00 mm slice thicknesses. Results for the percentage of points deviating from cadaveric anatomy greater than 2.00 mm agreed with those for RMS except when comparing pixel sizes of 0.75 mm and 0.818 mm against 1.32 mm in post-hoc testing, which showed a significant difference as well.
    CONCLUSIONS: This study suggests that slice thickness has a more significant impact on 3D model accuracy than pixel size, providing objective validation for guidelines favoring rigorous standards for slice thickness while recommending isotropic voxels. Additionally, our results indicate that CT scans up to 3.00 mm in slice thickness may provide an adequate 3D model for facial bony anatomy, such as the mandible, depending on the clinical indication.
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  • 文章类型: Journal Article
    背景:为了支持护理时的临床决策,必须提供基于标准操作程序(SOP)的“最佳下一步”和实际准确的患者数据。要做到这一点,文本SOP必须转换成可操作的临床算法,并与正在治疗的患者的数据相关联。对于这种联系,我们需要确切地知道临床医生在某个决策点需要哪些数据,以及这些数据是否可用。这些数据可能与SOP中使用的数据相同,或者可能集成了更广阔的视野。为了解决这些问题,我们从医师的角度检查了SOP使用的数据是否也是完整的,以进行情境决策.方法:我们选择了67例III期黑色素瘤患者,他们接受了辅助治疗,主要有前哨活检指征。首先,我们按照我们的临床算法对患者治疗进行了一步一步的模拟,这是基于医院特定的标准操作程序,使用我们队列的基于快速医疗保健互操作性资源(FHIR)的数据验证算法。第二,我们在算法中向10位皮肤肿瘤学家提出了三种不同的决策情况,专注于这个决策点使用的具体患者数据。结果进行了,分析,并与纯算法模拟进行了比较。结果:使用来自患者电子健康记录的数据,可以按照临床算法对黑色素瘤患者的治疗路径进行回顾性模拟。皮肤科医师随后的评估表明,与SOP使用的数据相比,三个决策点使用的数据的完整性在84.6%至100.0%之间。在一个决策点,缺少"患者年龄(初诊时)"和"首次诊断日期"的数据.结论:我们的决策点所需的数据可在基于FHIR的数据集中获得。此外,与医生在临床实践中所需的数据相比,SOP在决策点使用的数据以及临床算法几乎是完整的.这是进一步研究的重要前提,重点是在与所需患者数据集成的治疗过程中提出决策点。
    Background: To support clinical decision-making at the point of care, the \"best next step\" based on Standard Operating Procedures (SOPs) and actual accurate patient data must be provided. To do this, textual SOPs have to be transformed into operable clinical algorithms and linked to the data of the patient being treated. For this linkage, we need to know exactly which data are needed by clinicians at a certain decision point and whether these data are available. These data might be identical to the data used within the SOP or might integrate a broader view. To address these concerns, we examined if the data used by the SOP is also complete from the point of view of physicians for contextual decision-making. Methods: We selected a cohort of 67 patients with stage III melanoma who had undergone adjuvant treatment and mainly had an indication for a sentinel biopsy. First, we performed a step-by-step simulation of the patient treatment along our clinical algorithm, which is based on a hospital-specific SOP, to validate the algorithm with the given Fast Healthcare Interoperability Resources (FHIR)-based data of our cohort. Second, we presented three different decision situations within our algorithm to 10 dermatooncologists, focusing on the concrete patient data used at this decision point. The results were conducted, analyzed, and compared with those of the pure algorithmic simulation. Results: The treatment paths of patients with melanoma could be retrospectively simulated along the clinical algorithm using data from the patients\' electronic health records. The subsequent evaluation by dermatooncologists showed that the data used at the three decision points had a completeness between 84.6% and 100.0% compared with the data used by the SOP. At one decision point, data on \"patient age (at primary diagnosis)\" and \"date of first diagnosis\" were missing. Conclusions: The data needed for our decision points are available in the FHIR-based dataset. Furthermore, the data used at decision points by the SOP and hence the clinical algorithm are nearly complete compared with the data required by physicians in clinical practice. This is an important precondition for further research focusing on presenting decision points within a treatment process integrated with the patient data needed.
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  • 文章类型: Journal Article
    背景:先前已使用针对患者的3D计算流体动力学(CFD)模拟来识别注入参数的影响(例如注入位置,速度,等。)关于经动脉注射放射性微球治疗肝细胞癌期间的颗粒分布和肿瘤剂量。然而,这些模拟的计算成本很高,因此,我们的目标是评估这些是否可以可靠地简化。
    方法:我们确定并应用了五种简化策略(即截断,稳流建模,中度和重度网格粗化,并减少心动周期的数量)到患者特定的CFD设置。随后,我们评估了这些策略是否可用于(1)准确预测CFD输出(即颗粒分布和肿瘤剂量)和(2)量化模型输出对特定注射参数(注射流速)的敏感性.
    结果:出于准确性和敏感性的目的,适度的网格粗化是最可靠的简化策略,允许预测肿瘤剂量,最大偏差仅为1.4%,和类似的灵敏度(偏差为0.7%)。稳健策略表现最差,肿瘤剂量的最大偏差为20%,灵敏度差异为10%。
    结论:通过粗化网格,可以可靠地简化本研究的患者特定3DCFD模拟,计算时间减少了大约45%,这对敏感性研究特别有效。
    BACKGROUND: Patient-specific 3D computational fluid dynamics (CFD) simulations have been used previously to identify the impact of injection parameters (e.g. injection location, velocity, etc.) on the particle distribution and the tumor dose during transarterial injection of radioactive microspheres for treatment of hepatocellular carcinoma. However, these simulations are computationally costly, so we aim to evaluate whether these can be reliably simplified.
    METHODS: We identified and applied five simplification strategies (i.e. truncation, steady flow modelling, moderate and severe grid coarsening, and reducing the number of cardiac cycles) to a patient-specific CFD setup. Subsequently, we evaluated whether these strategies can be used to (1) accurately predict the CFD output (i.e. particle distribution and tumor dose) and (2) quantify the sensitivity of the model output to a specific injection parameter (injection flow rate).
    RESULTS: For both accuracy and sensitivity purposes, moderate grid coarsening is the most reliable simplification strategy, allowing to predict the tumor dose with only a maximal deviation of 1.4 %, and a similar sensitivity (deviation of 0.7 %). The steady strategy performs the worst, with a maximal deviation in the tumor dose of 20 % and a difference in sensitivity of 10 %.
    CONCLUSIONS: The patient-specific 3D CFD simulations of this study can be reliably simplified by coarsening the grid, decreasing the computational time by roughly 45 %, which works especially well for sensitivity studies.
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  • 文章类型: Journal Article
    目的:尽管肺静脉隔离(PVI),但持续性房颤(AF)患者的复发率为50%,对于第二次治疗没有共识。我们i-STRATIFICATION研究的目的是为PVI后房颤复发患者的最佳药物和消融治疗分层提供证据。通过计算机内试验。
    方法:800名虚拟患者的队列,随着心房解剖结构的变化,电生理学,和组织结构(低电压区域,LVA),针对从离子电流到心电图的临床数据进行了开发和验证。PVI后出现AF的虚拟患者接受了12次二次治疗。
    结果:522名虚拟患者在PVI后出现持续房颤。仅包括左心房消融术的第二次消融术显示55%的疗效,仅在小右心房(<60mL)成功。当考虑额外的腔静脉-三尖瓣峡部消融时,Marshall-Plan对小左心房(<90mL)足够(66%疗效)。对于更大的左心房,需要更积极的消融方法,例如二尖瓣前线(75%的疗效)或后壁隔离加二尖瓣峡部消融(77%的疗效)。具有LVA的虚拟患者极大地受益于左心房和右心房的LVA消融(100%疗效)。相反,在没有LVA的情况下,协同消融和药物治疗可终止房颤。在没有消融的情况下,患者的离子电流底物调节了抗心律失常药物的反应,是对胺碘酮或vernakalant的最佳分层至关重要的内向流。
    结论:计算机模拟试验根据虚拟患者特征确定房颤治疗的最佳策略,证明人体建模和仿真作为临床辅助工具的力量。
    OBJECTIVE: Patients with persistent atrial fibrillation (AF) experience 50% recurrence despite pulmonary vein isolation (PVI), and no consensus is established for secondary treatments. The aim of our i-STRATIFICATION study is to provide evidence for stratifying patients with AF recurrence after PVI to optimal pharmacological and ablation therapies, through in silico trials.
    RESULTS: A cohort of 800 virtual patients, with variability in atrial anatomy, electrophysiology, and tissue structure (low-voltage areas, LVAs), was developed and validated against clinical data from ionic currents to electrocardiogram. Virtual patients presenting AF post-PVI underwent 12 secondary treatments. Sustained AF developed in 522 virtual patients after PVI. Second ablation procedures involving left atrial ablation alone showed 55% efficacy, only succeeding in the small right atria (<60 mL). When additional cavo-tricuspid isthmus ablation was considered, Marshall-PLAN sufficed (66% efficacy) for the small left atria (<90 mL). For the bigger left atria, a more aggressive ablation approach was required, such as anterior mitral line (75% efficacy) or posterior wall isolation plus mitral isthmus ablation (77% efficacy). Virtual patients with LVAs greatly benefited from LVA ablation in the left and right atria (100% efficacy). Conversely, in the absence of LVAs, synergistic ablation and pharmacotherapy could terminate AF. In the absence of ablation, the patient\'s ionic current substrate modulated the response to antiarrhythmic drugs, being the inward currents critical for optimal stratification to amiodarone or vernakalant.
    CONCLUSIONS: In silico trials identify optimal strategies for AF treatment based on virtual patient characteristics, evidencing the power of human modelling and simulation as a clinical assisting tool.
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  • 文章类型: Journal Article
    通过更好和更早地预测反应,可以改善重复经颅磁刺激(rTMS)治疗。潜在类别混合物(LCMM)和非线性混合效应(NLME)模型已应用于对TMS的抗抑郁反应(或无反应)的轨迹进行建模。但目前尚不清楚此类模型能否预测临床结局.我们比较了LCMM和NLME方法在238名接受rTMS治疗抵抗性抑郁症(TRD)的患者的自然样本中对TMS的抗抑郁反应进行建模,跨多个线圈和协议。然后我们比较了这些模型的预测能力。LCMM轨迹主要受基线症状严重程度影响,但基线症状对后期抗抑郁反应的预测能力不大.相反,最佳LCMM模型是考虑基线症状的非线性两类模型.该模型准确预测了患者治疗4周时的反应(AUC=0.70,95%CI=[0.52-0.87])。但不是以前。NLME在治疗4周时提供了轻微改善的预测性能(AUC=0.76,95%CI=[0.58-0.94],但同样,不是以前。在显示这些方法对rTMS响应轨迹进行建模的预测有效性时,我们提供了轨迹建模可用于指导未来治疗决策的初步证据.
    Repetitive transcranial magnetic stimulation (rTMS) therapy could be improved by better and earlier prediction of response. Latent class mixture (LCMM) and non-linear mixed effects (NLME) modelling have been applied to model the trajectories of antidepressant response (or non-response) to TMS, but it is not known whether such models can predict clinical outcomes. We compared LCMM and NLME approaches to model the antidepressant response to TMS in a naturalistic sample of 238 patients receiving rTMS for treatment resistant depression (TRD), across multiple coils and protocols. We then compared the predictive power of those models. LCMM trajectories were influenced largely by baseline symptom severity, but baseline symptoms provided little predictive power for later antidepressant response. Rather, the optimal LCMM model was a nonlinear two-class model that accounted for baseline symptoms. This model accurately predicted patient response at 4 weeks of treatment (AUC = 0.70, 95% CI = [0.52-0.87]), but not before. NLME offered slightly improved predictive performance at 4 weeks of treatment (AUC = 0.76, 95% CI = [0.58 - 0.94], but likewise, not before. In showing the predictive validity of these approaches to model response trajectories to rTMS, we provided preliminary evidence that trajectory modeling could be used to guide future treatment decisions.
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  • 文章类型: Journal Article
    这项回顾性研究旨在比较患者特定植入物(PSI)与下颌骨第一计算机辅助设计和制造(CAD/CAM)夹板在II类骨骼错牙合患者正颌手术中上颌骨重新定位的准确性。主要预测因素是手术方法(PSIvs.夹板),主要结果是上颌骨质心位置的差异,次要结果是翻译和取向差异。共纳入82例患者(70例女性,12名男性;平均年龄25.5岁),每组41人。PSI组的上颌位置中位数差异为1.25mm(四分位距(IQR)1.03mm),显著低于夹板组的1.98mm(IQR1.64mm)(P<0.001)。在PSI组中,前后方向的最大平移差异中位数为0.74mm(IQR1.17mm),而最大的方向差异为螺距1.83°(IQR1.63°)。在夹板组中,前后方向的最大平移差异为1.14mm(IQR1.37mm),而最大的方向差异为间距3.03°(IQR2.11°)。总之,在骨骼II类错牙合的患者中,与下颌骨第一CAD/CAM夹板相比,PSI在正颌手术中的应用提高了上颌定位的精度。
    This retrospective study aimed to compare the accuracy of patient-specific implants (PSI) versus mandible-first computer-aided design and manufacturing (CAD/CAM) splints for maxilla repositioning in orthognathic surgery of skeletal Class II malocclusion patients. The main predictor was the surgical method (PSI vs. splints), with the primary outcome being the discrepancy in maxilla centroid position, and secondary outcomes being translation and orientation discrepancies. A total of 82 patients were enrolled (70 female, 12 male; mean age 25.5 years), 41 in each group. The PSI group exhibited a median maxillary position discrepancy of 1.25 mm (interquartile range (IQR) 1.03 mm), significantly lower than the splint group\'s 1.98 mm (IQR 1.64 mm) (P < 0.001). In the PSI group, the largest median translation discrepancy was 0.74 mm (IQR 1.17 mm) in the anteroposterior direction, while the largest orientation discrepancy was 1.83° (IQR 1.63°) in pitch. In the splint group, the largest median translation discrepancy was 1.14 mm (IQR 1.37 mm) in the anteroposterior direction, while the largest orientation discrepancy was 3.03° (IQR 2.11°) in pitch. In conclusion, among patients with skeletal Class II malocclusion, the application of PSI in orthognathic surgery yielded increased precision in maxillary positioning compared to mandible-first CAD/CAM splints.
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  • 文章类型: Journal Article
    目的:女性盆腔器官脱垂很常见,但是他们的治疗具有挑战性。值得注意的是,对这些问题的诊断和理解仍然不完整。应变期间盆腔器官的位移和变形的三维观察可以支持更好的理解,并有助于开发用于术前计划的综合工具。
    方法:本可行性研究评估了12名健康志愿者的三维动态MRI。使用五个相交的切片来近似三维采集,每个记录每秒两次。MRI在休息和劳损期间进行,直肠内和阴道内对比剂凝胶。通过分割为每个志愿者建立受试者特定的动态3D模型。
    结果:对于每位志愿者,盆腔器官可以在三个维度上分割,在五个切片上每秒采集两个周期,允许在应变过程中对位移和变形进行流体观察。手动分割全应变平均需要2小时和33分钟。直肠和盆底的上限是最难识别的结构。这种技术受限于其耗时的手动分割,这阻碍了其常规临床使用的植入。盆腔器官脱垂患者必须尝试这种方法。
    结论:在动态MRI中应用的这种多平面采集技术可以观察应变过程中盆腔器官的位移和变形。
    OBJECTIVE: Female pelvic organ prolapses are common, but their treatment is challenging. Notably, diagnosis and understanding of these troubles remain incomplete. Tridimensional observations of displacement and deformation of the pelvic organs during a strain could support a better understanding and help to develop comprehensive tools for preoperative planning.
    METHODS: The present feasibility study evaluates tridimensional dynamic MRI in 12 healthy volunteers. Tridimensional acquisitions were approximated using five intersecting slices, each recorded twice per second. MRI was performed during rest and strain, with intrarectal and intravaginal contrast gel. Subject-specific dynamic 3D models were built for each volunteer through segmentation.
    RESULTS: For each volunteer, pelvic organs could be segmented in three dimensions with a rate of acquisition of two cycles per second on five slices, allowing for a fluid observation of displacements and deformations during strain. Manual segmentation of a full strain required 2 h and 33 min on average. The upper limit of the rectum and the pelvic floor were the most difficult structures to identify. This technique is limited by its time-consuming manual segmentation, which impedes its implantation for routine clinical use. This method must be tried in patients with pelvic organ prolapse.
    CONCLUSIONS: This multi-planar acquisition technique applied during a dynamic MRI allows for observation of displacement and deformations of pelvic organs during a strain.
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