Parallel processing

并行处理
  • 文章类型: Editorial
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  • 文章类型: Journal Article
    连接神经元的活动,人类行为的回路和突触是神经科学的基本目标。实现这一目标具有挑战性,部分原因是行为,特别是感知,通常掩盖了潜在神经回路的复杂性,部分原因是灵长类动物与小鼠和苍蝇等动物之间的行为差异显着,在这些动物中,遗传操作相对普遍。在这里,我们将非人类灵长类视网膜中的视杆和视锥信号的电路级处理与人类视觉正常无缝性的已知中断联系起来——在特定条件下,令人惊讶的是无法看到高对比度的闪烁光。我们使用电生理记录和感知实验来确定塑造杆和锥产生的视网膜信号的视网膜整合的关键机制。然后,我们将这些机械见解纳入预测模型中,该模型准确地捕获了杆和锥介导的响应的抵消,并可以解释对闪烁的感知不敏感。
    Linking the activity of neurons, circuits and synapses to human behavior is a fundamental goal of neuroscience. Meeting this goal is challenging, in part because behavior, particularly perception, often masks the complexity of the underlying neural circuits, and in part because of the significant behavioral differences between primates and animals like mice and flies in which genetic manipulations are relatively common. Here we relate circuit-level processing of rod and cone signals in the non-human primate retina to a known break in the normal seamlessness of human vision - a surprising inability to see high contrast flickering lights under specific conditions. We use electrophysiological recordings and perceptual experiments to identify key mechanisms that shape the retinal integration of rod- and cone-generated retinal signals. We then incorporate these mechanistic insights into a predicti\\ve model that accurately captures the cancellation of rod- and cone-mediated responses and can explain the perceptual insensitivity to flicker.
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  • 文章类型: Journal Article
    全球导航卫星系统(GNSS)软件定义接收机提供了更大的灵活性,成本效益,自定义,与传统的基于硬件的接收器相比,使它们对于广泛的应用是必不可少的。全球导航卫星系统研究的不断发展和新功能的可用性要求这些软件定义的接收器不断升级,以促进最新要求。芬兰地理空间研究所(FGI)一直在通过其开源实施来支持GNSS研究界,例如基于MATLAB的GNSS软件定义接收器“FGI-GSRx”和基于Python的实现“FGI-OSNMA”,用于利用Galileo的开放式服务导航消息认证(OSNMA)。在这种情况下,较长的数据集对GNSS软件定义接收机支持自适应至关重要,优化,并促进测试,以调查和开发面向未来的接收器能力。在本文中,我们提供了FGI-GSRx的更新版本,即,FGI-GSRx-v2.0.0,它也可以作为研究社区的开源资源提供。与以前的版本相比,FGI-GSRx-v2.0.0提供了改进的性能,特别是对于长数据集的执行。这是通过优化接收器的功能并提供新添加的并行处理功能来实现的,以确保更快的能力来处理原始GNSS数据。本文还对FGI-GSRx的先前和当前版本的一些关键设计方面进行了分析,以更好地了解接收器的功能。结果表明,在顺序处理模式的情况下,FGI-GSRx-v2.0.0比FGI-GSRx-v1.0.0提供了约40%的运行时间执行改进,在并行处理模式的情况下提供了约59%的改进。来自GPS和伽利略的17颗GNSS卫星。此外,尝试使用MATLAB自己的并行计算工具箱执行v2.0.0。详细的性能比较表明,对于相同的GNSS场景,与v2.0.0并行处理模式相比,执行时间提高了约43%。
    The Global Navigation Satellite System (GNSS) software-defined receivers offer greater flexibility, cost-effectiveness, customization, and integration capabilities compared to traditional hardware-based receivers, making them essential for a wide range of applications. The continuous evolution of GNSS research and the availability of new features require these software-defined receivers to upgrade continuously to facilitate the latest requirements. The Finnish Geospatial Research Institute (FGI) has been supporting the GNSS research community with its open-source implementations, such as a MATLAB-based GNSS software-defined receiver `FGI-GSRx\' and a Python-based implementation `FGI-OSNMA\' for utilizing Galileo\'s Open Service Navigation Message Authentication (OSNMA). In this context, longer datasets are crucial for GNSS software-defined receivers to support adaptation, optimization, and facilitate testing to investigate and develop future-proof receiver capabilities. In this paper, we present an updated version of FGI-GSRx, namely, FGI-GSRx-v2.0.0, which is also available as an open-source resource for the research community. FGI-GSRx-v2.0.0 offers improved performance as compared to its previous version, especially for the execution of long datasets. This is carried out by optimizing the receiver\'s functionality and offering a newly added parallel processing feature to ensure faster capabilities to process the raw GNSS data. This paper also presents an analysis of some key design aspects of previous and current versions of FGI-GSRx for a better insight into the receiver\'s functionalities. The results show that FGI-GSRx-v2.0.0 offers about a 40% run time execution improvement over FGI-GSRx-v1.0.0 in the case of the sequential processing mode and about a 59% improvement in the case of the parallel processing mode, with 17 GNSS satellites from GPS and Galileo. In addition, an attempt is made to execute v2.0.0 with MATLAB\'s own parallel computing toolbox. A detailed performance comparison reveals an improvement of about 43% in execution time over the v2.0.0 parallel processing mode for the same GNSS scenario.
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  • 文章类型: Journal Article
    倒装芯片中的微观缺陷,源于制造业,显着影响性能和寿命。制造后采样方法可确保产品功能,但缺乏实时提高芯片产量和使用寿命的在线缺陷监测。这项研究介绍了一种光声遥感(PARS)系统,用于倒装芯片制造过程中的在线成像和缺陷识别。我们首先提出了一种基于连续采集与并行处理图像重建相结合的实时PARS成像方法,以实现倒装芯片样品扫描过程中的实时成像,将重建时间从平均约1134ms减少到38ms。随后,我们提出了改进的YOLOv7与空间深度块(IYOLOv7-SPD),一种增强的深度学习缺陷识别方法,在PARS实时成像过程中对微观缺陷进行准确的在线识别和定位。实验结果验证了所提出的系统在芯片制造设施中提高倒装芯片产品的寿命和产量的可行性。
    Microscopic defects in flip chips, originating from manufacturing, significantly affect performance and longevity. Post-fabrication sampling methods ensure product functionality but lack in-line defect monitoring to enhance chip yield and lifespan in real-time. This study introduces a photoacoustic remote sensing (PARS) system for in-line imaging and defect recognition during flip-chip fabrication. We first propose a real-time PARS imaging method based on continuous acquisition combined with parallel processing image reconstruction to achieve real-time imaging during the scanning of flip-chip samples, reducing reconstruction time from an average of approximately 1134 ms to 38 ms. Subsequently, we propose improved YOLOv7 with space-to-depth block (IYOLOv7-SPD), an enhanced deep learning defect recognition method, for accurate in-line recognition and localization of microscopic defects during the PARS real-time imaging process. The experimental results validate the viability of the proposed system for enhancing the lifespan and yield of flip-chip products in chip manufacturing facilities.
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  • 文章类型: Journal Article
    同化是指能够快速准确地评估少量(最多4个)的能力。这个系统,然而,可能会受到与要列举的目标一起出现的干扰物的损害。为了更好地理解这种限制是出现在感知电路中还是出现在响应选择阶段,我们调查了在同时进行的比较任务中是否可以持续进行。参与者被要求比较屏幕左右两侧两组的点数,同时或依次呈现。为了在数字范围(6-32点)内进行比较,随着两个数字之间的比率接近“1”,错误率和反应时间都稳步增加。\"即,揭示了一种标记为比率效应的现象。为了与小数字(<5)进行比较,尽管有比率,但顺序比较任务是无差错的,暗示了亚硝化的特征。在顺序比较中,个体效率(通过逆效率得分[IES]衡量)在数字范围之间不相关,这表明涉及不同的机制。然而,我们发现在同步任务中,随着两个数字的比率接近“1”,错误率和效率显示出增加。“这类似于中等数字比较中显示的比率效应。这两个范围内的个体效率相关,表示这两个范围内的枚举基于单一机制。这些结果表明,亚硝化不能并行处理集合,每当subitizing失败时,numerosity都会执行该作业。
    Subitizing is the ability to appraise a number of small quantities (up to four) rapidly and precisely. This system, however, can be impaired by distractors presented along with targets to be enumerated. To better understand whether this limitation arises in perceptual circuits or in the response selection stage, we investigated whether subitizing can endure in simultaneous comparison tasks. Participants were asked to compare the number of dots in two sets on the left and right sides of the screen, presented either simultaneously or sequentially. For comparing within the numerosity range (6-32 dots), both the error rate and reaction time increased steadily as the ratio between the two numbers compared approached \"1.\" Namely, a phenomenon labeled the ratio effect was revealed. For comparison with small numbers (<5), the sequential comparison task was errorless despite the ratio, suggesting the feature of subitizing. Individual efficiency (measured by the inverse efficiency score [IES]) did not correlate between number ranges in sequential comparison, suggesting that distinct mechanisms were involved. However, we found that in simultaneous tasks, error rate and efficiency showed an increase as the ratios of the two numbers compared approached \"1.\" This is similar to the ratio effect revealed in the comparison for moderate numbers. Individual efficiency within these two ranges correlated, indicating that the enumeration within these two ranges was based on a single mechanism. These results suggest that subitizing cannot process sets in parallel, and numerosity takes the job whenever subitizing fails.
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  • 文章类型: Journal Article
    并行处理是感官编码的基本策略。通过这种处理,独特和独特的感觉特征被计算并投射到中心目标。这篇综述提出了二尖瓣和簇绒细胞,它们是嗅球中的二阶投影神经元,有助于嗅觉系统内的并行处理。根据解剖学和功能性证据,我讨论了可以通过这些神经元形成的独特通道传达的潜在特征。
    Parallel processing is a fundamental strategy of sensory coding. Through this processing, unique and distinct features of sensations are computed and projected to the central targets. This review proposes that mitral and tufted cells, which are the second-order projection neurons in the olfactory bulb, contribute to parallel processing within the olfactory system. Based on anatomical and functional evidence, I discuss potential features that could be conveyed through the unique channel formed by these neurons.
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  • 文章类型: Journal Article
    使用多于一个处理器来计算以便克服构成整体作业的不同医学成像方法的复杂性的方法被称为基于GPU(图形处理单元)的并行处理。它对于图像分类等几种医学成像技术都是极其重要的,物体检测,图像分割,注册,和基于内容的图像检索,由于基于GPU的并行处理方法允许软件进行时间高效的计算,允许一次完成多个计算。另一方面,可以描绘人体的解剖结构和生物进步的非侵入性成像技术被称为磁共振成像(MRI)。使用医学成像技术在脑MRI分析中实施基于GPU的并行处理方法可能有助于实现即时和及时的图像捕获。因此,这篇扩展的综述(IWBBIO2023会议论文的扩展)提供了对文献的全面概述,重点是利用上述成像技术扩展使用基于GPU的并行处理方法进行脑部MRI的医学分析,鉴于需要更快的计算来获得医学中的早期和实时反馈。在2019年至2023年之间,我们检查了文献矩阵中包含任务的文章,技术,MRI序列,和处理结果。因此,本综述中讨论的方法展示了迄今为止在最小化计算运行时间方面取得的进步,以及未来仍需解决的障碍和问题。
    The approach of using more than one processor to compute in order to overcome the complexity of different medical imaging methods that make up an overall job is known as GPU (graphic processing unit)-based parallel processing. It is extremely important for several medical imaging techniques such as image classification, object detection, image segmentation, registration, and content-based image retrieval, since the GPU-based parallel processing approach allows for time-efficient computation by a software, allowing multiple computations to be completed at once. On the other hand, a non-invasive imaging technology that may depict the shape of an anatomy and the biological advancements of the human body is known as magnetic resonance imaging (MRI). Implementing GPU-based parallel processing approaches in brain MRI analysis with medical imaging techniques might be helpful in achieving immediate and timely image capture. Therefore, this extended review (the extension of the IWBBIO2023 conference paper) offers a thorough overview of the literature with an emphasis on the expanding use of GPU-based parallel processing methods for the medical analysis of brain MRIs with the imaging techniques mentioned above, given the need for quicker computation to acquire early and real-time feedback in medicine. Between 2019 and 2023, we examined the articles in the literature matrix that include the tasks, techniques, MRI sequences, and processing results. As a result, the methods discussed in this review demonstrate the advancements achieved until now in minimizing computing runtime as well as the obstacles and problems still to be solved in the future.
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  • 文章类型: Journal Article
    新兴的双光子聚合(TPP)技术可以实现复杂3D结构的高分辨率打印,革命性的微/纳米增材制造。已经提出了各种快速扫描和并行处理策略来提高其效率。然而,为并行高速扫描获得大量均匀的焦点仍然具有挑战性,这阻碍了更高吞吐量的实现。我们报告了一个TPP打印平台,该平台结合了电流计镜和硅空间光调制器(LCoS-SLM)上的液晶。通过将目标光场设置在LCoS-SLM的衍射中心,获得足够的能量以支持超过400个病灶的同时聚合。快速扫描,最大打印速度达到1.49×108体素s-1,超过现有的基于扫描的TPP方法,同时保持高打印分辨率和灵活性。为了展示处理能力,功能3D微结构阵列快速制造并应用于微光学和微物体操纵。我们的方法可能会扩大TPP在大规模微/纳米制造中的前景。
    The emerging two-photon polymerization (TPP) technique enables high-resolution printing of complex 3D structures, revolutionizing micro/nano additive manufacturing. Various fast scanning and parallel processing strategies have been proposed to promote its efficiency. However, obtaining large numbers of uniform focal spots for parallel high-speed scanning remains challenging, which hampers the realization of higher throughput. We report a TPP printing platform that combines galvanometric mirrors and liquid crystal on silicon spatial light modulator (LCoS-SLM). By setting the target light field at LCoS-SLM\'s diffraction center, sufficient energy is acquired to support simultaneous polymerization of over 400 foci. With fast scanning, the maximum printing speed achieves 1.49 × 108 voxels s-1, surpassing the existing scanning-based TPP methods while maintaining high printing resolution and flexibility. To demonstrate the processing capability, functional 3D microstructure arrays are rapidly fabricated and applied in micro-optics and micro-object manipulation. Our method may expand the prospects of TPP in large-scale micro/nanomanufacturing.
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  • 文章类型: Journal Article
    动物具有互补的并行记忆系统,可处理来自各种感觉方式的信号。在果蝇果蝇的大脑中,蘑菇体(MB)电路是主要的联想神经纤维,对嗅觉记忆的所有阶段都至关重要。这里,我们的发现表明,来自特定不对称体(AB)神经元的主动信号传导对于该过程也至关重要。这些AB神经元分别对气味和电击做出反应,并表现出对配对刺激的定时敏感神经元活动,同时在检索过程中留下减少的记忆痕迹。我们的实验还表明rutabaga编码的腺苷酸环化酶,调解巧合检测,在AB和MB中都需要学习和短期记忆。我们观察到在两个结构中操纵rutabaga共表达时的加性效应。一起,这些结果暗示AB在联想嗅觉学习和短期记忆中起关键作用。
    Animals have complementary parallel memory systems that process signals from various sensory modalities. In the brain of the fruit fly Drosophila melanogaster, mushroom body (MB) circuitry is the primary associative neuropil, critical for all stages of olfactory memory. Here, our findings suggest that active signaling from specific asymmetric body (AB) neurons is also crucial for this process. These AB neurons respond to odors and electric shock separately and exhibit timing-sensitive neuronal activity in response to paired stimulation while leaving a decreased memory trace during retrieval. Our experiments also show that rutabaga-encoded adenylate cyclase, which mediates coincidence detection, is required for learning and short-term memory in both AB and MB. We observed additive effects when manipulating rutabaga co-expression in both structures. Together, these results implicate the AB in playing a critical role in associative olfactory learning and short-term memory.
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  • 文章类型: Journal Article
    在研究最常见的灵长类视网膜神经节细胞(RGC)类型的感受野方面已经取得了相当大的进展,如阳伞RGC。关于稀有的灵长类RGC类型和产生非规范感受场结构的电路知之甚少。本研究的目的是分析平滑单分层RGC的突触输入,以确定其复杂的空间感受野的起源,其中包含称为“热点”的高灵敏度孤立区域。“有趣的是,平滑的单分层RGC与经过充分研究的阳伞RGC共同分层,因此被限制为从双极和无长突细胞接收输入,过程共享同一层,提出了它们的功能差异是如何产生的问题。通过将电路和突触的3D重建到中央猕猴视网膜的ON光滑单分层和ON阳伞RGC上,我们确定了光滑和阳伞RGC采用的四种不同的采样策略,以从双极和无长突细胞共分层中提取不同的反应特性.两种RGC类型在无长突细胞输入的比例上有所不同,共同分层双极细胞类型的相对贡献,每个双极细胞的突触输入量,双极细胞突触的空间分布。我们的结果表明,平滑RGC的复杂感受场结构是通过兴奋性双极细胞输入中的空间不对称性而产生的,该结构形成了与生理测量热点相当的几个离散簇。一起来看,我们的结果证明了ON阳伞和ON平滑单分层RGC之间的显著差异是由于对一组共同的突触输入进行采样的不同策略引起的。
    Considerable progress has been made in studying the receptive fields of the most common primate retinal ganglion cell (RGC) types, such as parasol RGCs. Much less is known about the rarer primate RGC types and the circuitry that gives rise to noncanonical receptive field structures. The goal of this study was to analyze synaptic inputs to smooth monostratified RGCs to determine the origins of their complex spatial receptive fields, which contain isolated regions of high sensitivity called \"hotspots.\" Interestingly, smooth monostratified RGCs co-stratify with the well-studied parasol RGCs and are thus constrained to receiving input from bipolar and amacrine cells with processes sharing the same layer, raising the question of how their functional differences originate. Through 3D reconstructions of circuitry and synapses onto ON smooth monostratified and ON parasol RGCs from central macaque retina, we identified four distinct sampling strategies employed by smooth and parasol RGCs to extract diverse response properties from co-stratifying bipolar and amacrine cells. The two RGC types differed in the proportion of amacrine cell input, relative contributions of co-stratifying bipolar cell types, amount of synaptic input per bipolar cell, and spatial distribution of bipolar cell synapses. Our results indicate that the smooth RGC\'s complex receptive field structure arises through spatial asymmetries in excitatory bipolar cell input which formed several discrete clusters comparable with physiologically measured hotspots. Taken together, our results demonstrate how the striking differences between ON parasol and ON smooth monostratified RGCs arise from distinct strategies for sampling a common set of synaptic inputs.
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