OmcS

  • 文章类型: Journal Article
    通过将呼吸电子通过长达20年之久的争议身份的细丝释放到矿物质和其他微生物,从而还原了地球的生物地球化学。低温电子显微镜显示了氧化还原活性细胞色素的细丝,但是相同的细丝在细胞色素变性/抑制条件下表现出有机金属样导电性的标志。本文合成了对多血红素蛋白的基于结构的先前计算和动力学分析,以提出至少约7个细胞色素纳米线可以携带Geobacter细胞的呼吸通量,已知表达更多(≥20)细丝以增加生产性接触的可能性。相比之下,由于实验伪影和样品杂质,先前的电学和光谱结构表征被认为与已知的细胞色素丝在生理上无关或在物理上不合理。这种观点澄清了我们对生理金属-微生物相互作用的机械理解,并推进了合成生物学努力,以优化生物修复和能源或化学生产的相互作用。
    Geobacter sulfurreducens profoundly shapes Earth\'s biogeochemistry by discharging respiratory electrons to minerals and other microbes through filaments of a two-decades-long debated identity. Cryogenic electron microscopy has revealed filaments of redox-active cytochromes, but the same filaments have exhibited hallmarks of organic metal-like conductivity under cytochrome denaturing/inhibiting conditions. Prior structure-based calculations and kinetic analyses on multi-heme proteins are synthesized herein to propose that a minimum of ~7 cytochrome \'nanowires\' can carry the respiratory flux of a Geobacter cell, which is known to express somewhat more (≥20) filaments to increase the likelihood of productive contacts. By contrast, prior electrical and spectroscopic structural characterizations are argued to be physiologically irrelevant or physically implausible for the known cytochrome filaments because of experimental artifacts and sample impurities. This perspective clarifies our mechanistic understanding of physiological metal-microbe interactions and advances synthetic biology efforts to optimize those interactions for bioremediation and energy or chemical production.
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  • 文章类型: Journal Article
    电生物腐蚀,微生物通过直接的Fe0-微生物电连接从金属铁(Fe0)中提取电子的过程,被认为是导致影响许多行业的含铁金属的昂贵腐蚀的原因。然而,电生物腐蚀机理知之甚少。我们在这里报道,导电菌毛(e-pili)和导电矿物磁铁矿在Fe0和硫化Geobacter还原之间的电子转移中起着重要作用,第一个微生物,其中电生物腐蚀已被严格记录。表达导电性差的菌毛的遗传修饰大大减少了腐蚀性点蚀和Fe0至微生物的电子通量。磁铁矿降低了对电子转移的阻力,增加腐蚀电流和加剧点蚀。突变体的研究表明,磁铁矿以类似于外表面c型细胞色素OmcS的方式促进电子转移。这些发现,事实上,磁铁矿是铁腐蚀的常见产物,表明腐蚀过程中产生的磁铁矿的潜在正反馈回路进一步加速了电生物腐蚀。e-pili的相互作用,细胞色素,和磁铁矿证明了电生物腐蚀的机械复杂性,而且还提供了对检测和可能减轻这种经济破坏性过程的见解。
    Electrobiocorrosion, the process in which microbes extract electrons from metallic iron (Fe0 ) through direct Fe0 -microbe electrical connections, is thought to contribute to the costly corrosion of iron-containing metals that impacts many industries. However, electrobiocorrosion mechanisms are poorly understood. We report here that electrically conductive pili (e-pili) and the conductive mineral magnetite play an important role in the electron transfer between Fe0 and Geobacter sulfurreducens, the first microbe in which electrobiocorrosion has been rigorously documented. Genetic modification to express poorly conductive pili substantially diminished corrosive pitting and rates of Fe0 -to-microbe electron flux. Magnetite reduced resistance to electron transfer, increasing corrosion currents and intensifying pitting. Studies with mutants suggested that the magnetite promoted electron transfer in a manner similar to the outer-surface c-type cytochrome OmcS. These findings, and the fact that magnetite is a common product of iron corrosion, suggest a potential positive feedback loop of magnetite produced during corrosion further accelerating electrobiocorrosion. The interactions of e-pili, cytochromes, and magnetite demonstrate mechanistic complexities of electrobiocorrosion, but also provide insights into detecting and possibly mitigating this economically damaging process.
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  • 文章类型: Journal Article
    具有有机功能图案的无机二维(2D)材料的改性对于优化其性能具有很高的要求。但这仍然是一个艰巨的挑战。有机金属硫族化物(OMC)是一种新兴的二维材料,金属硫属化物层由长距离有序有机功能基序共价锚定,这些材料是非常理想的,但不可能通过传统方法实现。OMC的无机层和有机功能基序都是高度可设计的,因此为这类2D材料提供了结构和性能方面的巨大差异。这篇小型评论旨在回顾OMC及其散装前体的最新发展。首先,介绍了OMC本体前驱体的结构类型。第二,OMC2D材料的合成及其在光电中的应用,催化作用,传感器,并对能量转移进行了探索。最后,讨论了未来OMC研究的挑战和前景。
    The modification of inorganic two-dimensional (2D) materials with organic functional motifs is in high demand for the optimization of their properties, but it is still a daunting challenge. Organic metal chalcogenides (OMCs) are a type of newly emerging 2D materials, with metal chalcogenide layers covalently anchored by long-range ordered organic functional motifs, these materials are extremely desirable but impossible to realize by traditional methods. Both the inorganic layer and organic functional motifs of OMCs are highly designable and thus provide this type of 2D materials with enormous variety in terms of their structure and properties. This Minireview aims to review the latest developments in OMCs and their bulk precursors. Firstly, the structure types of the bulk precursors for OMCs are introduced. Second, the synthesis and applications of OMC 2D materials in photoelectricity, catalysis, sensors, and energy transfer are explored. Finally, the challenges and perspectives for future research on OMCs are discussed.
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  • 文章类型: Journal Article
    Geobacter sulfurreducens is a good candidate as a chassis organism due to its ability to form thick, conductive biofilms, enabling long-distance extracellular electron transfer (EET). Due to the complexity of EET pathways in G. sulfurreducens, a dynamic approach is required to study genetically modified EET rates in the biofilm. By coupling online resonance Raman microscopy with chronoamperometry, we were able to observe the dynamic discharge response in the biofilm\'s cytochromes to an increase in anode voltage. Measuring the heme redox state alongside the current allows for the fitting of a dynamic model using the current response and a subsequent validation of the model via the value of a reduced cytochrome c Raman peak. The modeled reduced cytochromes closely fitted the Raman response data from the G. sulfurreducens wild-type strain, showing the oxidation of heme groups in cytochromes until a new steady state was achieved. Furthermore, the use of a dynamic model also allows for the calculation of internal rates, such as acetate and NADH consumption rates. The Raman response of a mutant lacking OmcS showed a higher initial oxidation rate than predicted, followed by an almost linear decrease of the reduced mediators. The increased initial rate could be attributed to an increase in biofilm conductivity, previously observed in biofilms lacking OmcS. One explanation for this is that OmcS acts as a conduit between cytochromes; therefore, deleting the gene restricts the rate of electron transfer to the extracellular matrix. This could, however, be modeled assuming a linear oxidation rate of intercellular mediators.IMPORTANCE Bioelectrochemical systems can fill a vast array of application niches, due to the control of redox reactions that it offers. Although native microorganisms are preferred for applications such as bioremediation, more control is required for applications such as biosensors or biocomputing. The development of a chassis organism, in which the EET is well defined and readily controllable, is therefore essential. The combined approach in this work offers a unique way of monitoring and describing the reaction kinetics of a G. sulfurreducens biofilm, as well as offering a dynamic model that can be used in conjunction with applications such as biosensors.
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