Nutritional biochemistry

  • 文章类型: Journal Article
    我们现在生活在一个代谢数据越来越可访问和可用的时代。可以使用新技术(例如,机器学习和人工智能),但这并不能缓解科学家使用“人类智能”的问题。本文的目的是将大型生化反应数据库的信息与方法和工具相结合,以使营养学家更容易获得营养生物化学。开发了一个脚本来从具有超过16.000个生化反应的数据库中提取信息,以便将其用于“生化簿记”。超过300个元反应的系统(即,一系列相互关联的个体反应的结局反应)构建了涵盖大量和微量营养素代谢途径的广泛途径。通过识别代谢节点构建Meta反应,它们是代谢系统的输入或输出,或者用作元反应之间的连接点。可以通过使用简单的Excel工具组合和平衡元反应来构建完整的代谢途径。为了说明在营养生物化学教学中使用元反应和工具,给出了一些例子来说明葡萄糖可以合成多少ATP,直接或间接(即,通过储存和动员或通过中间代谢物在组织和世代之间的转移)。为了说明元反应和工具如何在研究中使用,利用奶牛乳腺的营养平衡数据构建了整个乳腺营养代谢的合理途径。平衡数据包括乳腺吸收或输出的34种代谢物,并使用39种元反应来构建代谢途径,以解释代谢物的摄取和输出。结果强调了从精氨酸合成脯氨酸以及乳腺伴随的尿素合成的重要性。它还提出了代谢途径或葡萄糖摄取的可用性是否将是脂肪酸合成所需的NADPH合成的更多限制因素的问题。一个开放的生化反应数据库的可用性,元反应的概念,并提供一个工具允许用户构建代谢途径,这有助于获得更全面和综合的新陈代谢视图,并可能提出可能难以识别的问题。
    We now live in an era where metabolic data are increasingly accessible and available. Analysis of this data can be done using novel techniques (e.g., machine learning and artificial intelligence) but this does not alleviate scientists to use \"human intelligence\". The objective of this paper is to combine the information of a large database of biochemical reactions with a method and tool to make nutritional biochemistry more accessible to nutritionists. A script was developed to extract information from a database with more than 16 000 biochemical reactions so that it can be used for \"biochemical bookkeeping\". A system of more than 300 meta-reactions (i.e., the outcome reaction of a series of connected individual reactions) was constructed covering a wide range of metabolic pathways for macro- and micronutrients. Meta-reactions were constructed by identifying metabolic nodes, which are inputs or outputs of a metabolic system or that serve as connection points between meta-reactions. Complete metabolic pathways can be constructed by combining and balancing the meta-reactions using a simple Excel tool. To illustrate the use of meta-reactions and the tool in the teaching of nutritional biochemistry, examples are given to illustrate how much ATP can be synthesized from glucose, either directly or indirectly (i.e., via storage and mobilization or via transfer of intermediate metabolites between tissues and generations). To illustrate how meta-reactions and the tool can be used in research, nutrient balance data of the mammary gland of a dairy cow were used to construct a plausible pathway of nutrient metabolism of the whole mammary gland. The balance data included 34 metabolites taken up or exported by the mammary gland and 39 meta-reactions were used to construct a metabolic pathway that accounted for the uptake and output of metabolites. The results highlighted the importance of the synthesis of proline from arginine and the concomitant synthesis of urea by the mammary gland. It also raised the question of whether the availability of metabolic pathways or glucose uptake would be the more limiting factor for the synthesis of NADPH required for fatty acid synthesis. The availability of an open database with biochemical reactions, the concept of meta-reactions, and the provision of a tool allow users to construct metabolic pathways, which helps acquiring a more comprehensive and integrated view of metabolism and may raise issues that may be difficult to identify otherwise.
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  • 文章类型: Biography
    詹姆斯·M·恩坦比的采访,生物化学教授和KatherineBernsVanDonkSteenbock营养学教授,农业与生命科学学院,在威斯康星大学麦迪逊分校,于2022年4月通过Zoom进行。他接受了PatrickJ.Stover的采访,通过农业促进健康研究所所长,德克萨斯农工大学营养与生物化学和生物物理学教授。JamesNtambi博士是营养生物化学领域的真正先驱。他是最早发现和阐明饮食和营养素在通过代谢基因表达变化调节代谢中的作用的人之一,专注于从头脂肪生成途径。作为来自乌干达的非洲移民,他对科学的热爱以及他在遭受严重营养不良的非洲社区的生活经历塑造了他在生物化学和营养界面的科学兴趣。在他的职业生涯中,他一直是学术上的榜样,一位开创性的营养科学家,一个教育家。他致力于通过他在乌干达举办的许多出国留学课程进行体验式学习,为美国学生提供了宝贵的营养环境。恩坦比博士对教育和科学发现的热情是他的遗产,营养领域从他对科学的好奇心所定义的独特观点和对科学的贡献中受益匪浅,他对学生和同事的慷慨,和他的生活经历。以下是经过编辑的成绩单。
    An interview with James M. Ntambi, professor of biochemistry and the Katherine Berns Van Donk Steenbock Professor in Nutrition, College of Agricultural and Life Sciences, at the University of Wisconsin-Madison, took place via Zoom in April 2022. He was interviewed by Patrick J. Stover, director of the Institute for Advancing Health through Agriculture and professor of nutrition and biochemistry and biophysics at Texas A&M University. Dr. James Ntambi is a true pioneer in the field of nutritional biochemistry. He was among the very first to discover and elucidate the role that diet and nutrients play in regulating metabolism through changes in the expression of metabolic genes, focusing on the de novo lipogenesis pathways. As an African immigrant from Uganda, his love of science and his life experiences in African communities suffering from severe malnutrition molded his scientific interests at the interface of biochemistry and nutrition. Throughout his career, he has been an academic role model, a groundbreaking nutrition scientist, and an educator. His commitment to experiential learning through the many study-abroad classes he has hosted in Uganda has provided invaluable context for American students in nutrition. Dr. Ntambi\'s passion for education and scientific discovery is his legacy, and the field of nutrition has benefited enormously from his unique perspectives and contributions to science that are defined by his scientific curiosity, his generosity to his students and colleagues, and his life experiences. The following is an edited transcript.
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  • 文章类型: Review
    这篇综述将探讨5'-单磷酸腺苷活化蛋白激酶(AMPK)在肥胖治疗中的作用。医学营养和慢性病,以及它与营养的关系。在文学中,研究AMPK与营养直接关系的研究数量微不足道.出于这个原因,有关该主题的信息已从所有可以通过搜索术语AMPK和疾病访问的研究中汇编,AMPK与健康,AMPK和锻炼,AMPK和营养。可以说,AMPK在许多病理条件下被抑制,例如炎症,糖尿病,衰老和癌症,和AMPK激活在许多疾病,如胰岛素抵抗,糖尿病,肥胖,癌症和老年痴呆症。当检查营养和AMPK之间的关系时,可以看出,食物摄入抑制了AMPK,但尤其是高碳水化合物和高脂肪饮食在这一点上更有效。此外,高果糖玉米饼和长链饱和脂肪酸因食用工业食品而增加,并且经常进餐似乎是AMPK的灭活剂。对于医学营养治疗中的AMPK激活,建议使用晚上禁食和间歇性禁食等方法,考虑到人类的昼夜节律。
    This review will examine the role of 5\'-adenosine monophosphate-activated protein kinase (AMPK) in the treatment of obesity, medical nutrition and chronic diseases, and its relationship with nutrition. In the literature, the number of studies examining the direct relationship of AMPK with nutrition is negligible. For this reason, information on the subject has been compiled from all the studies that can be accessed by searching the terms AMPK and disease, AMPK and health, AMPK and exercise, AMPK and nutrition. It can be stated that AMPK is inhibited in many pathological conditions such as inflammation, diabetes, aging and cancer, and AMPK activation has positive effects in many diseases such as insulin resistance, diabetes, obesity, cancer and Alzheimer\'s. When the relationship between nutrition and AMPK is examined, it is seen that food intake inhibits AMPK, but especially high-carbohydrate and fatty diets are more effective at this point. In addition, high fructose corn sirup and long chain saturated fatty acids increased by consumption of industrial foods and frequent meals appear to be an inactivator for AMPK. For AMPK activation in medical nutrition therapy, it is recommended to use methods such as evening fasting and intermittent fasting, taking into account the human circadian rhythm.
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  • 文章类型: Journal Article
    This study aims to investigate dietary and nutritional biochemistry profiles of attention-deficit/hyperactivity disorder (ADHD) and to explore their potential relationship by path analysis. We enrolled 216 children with ADHD and 216 age-, height- and gender-matched controls from 31 elementary schools in Taiwan. Dietary intake of the participants was assessed using a food frequency questionnaire (FFQ). Fasting blood samples were collected to determine the serum levels of multiple nutritional markers. Moreover, we employed a structural equation model (SEM) to link diet, nutritional markers and ADHD. Compared to healthy control, ADHD children had significantly lower serum levels of vitamin B12, folate, vitamin B6, ferritin concentration, and monounsaturated fatty acids (MUFA), but higher levels of serum saturated fatty acids (SFA), n-6/n-3 fatty acid ratio, and inorganic phosphorous concentration. Children with ADHD had more intake of nutrient-poor foods such as high sugar and high fat foods, and had less intake of vegetable, fruit, protein-rich foods than their counterpart. SEM analysis showed that the poor nutritional biochemistry profiles linked the association between unhealthy dietary patterns and ADHD. In conclusion, an unhealthy dietary pattern may be a predecessor of the poor nutritional biochemistry status, and managing diet and nutrition conditions should be considered to improve ADHD symptoms in children.
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  • 文章类型: Journal Article
    Nutrigenetics and nutrigenomics, as well as diet and exercise, play an important role in the development and treatment of obesity and its comorbidities. If an individual\'s susceptibility to becoming obese and their responsiveness to weight loss interventions are to be understood, then it needs to be addressed at a molecular and metabolic level, including genetic interaction. This review proposes a three-pillar approach to more fully comprehend the complexity of diet-gene interactions in obesity. Peroxisomal proliferating-activated receptor gamma (PPARG) and mitochondrial uncoupling protein-1 (UCP-1) are explored in detail. Illustrating how an understanding of nutritional biochemistry, nutrigenomics, and nutrigenetics may be the key to understanding differences observed in the obese phenotype that vary both within and across populations.
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