Nuclear stress

  • 文章类型: Journal Article
    背景:凋亡是一种程序性细胞死亡,其特征是细胞质液泡化,已被探索作为癌症治疗的替代方法,并与癌症抗性有关。然而,癌细胞凋亡进展的潜在机制仍然未知.
    方法:凋亡诱导剂,CPYPP,环孢菌素A,还有姜黄素,用于研究凋亡的潜在机制。下一代测序和液相色谱-质谱分析揭示了基因和蛋白质表达的显著变化。采用药理学和遗传学方法来阐明与凋亡相关的转录事件。使用异种移植小鼠模型来评估上下垂作为抗癌策略的潜力。
    结果:CPYPP,环孢菌素A,姜黄素诱导细胞质空泡化并触发癌细胞凋亡。副程序涉及活性氧(ROS)激发和蛋白抑制动力学的激活,导致与氧化还原稳态和蛋白质稳态相关的转录激活。药理学和遗传学方法均表明,细胞周期蛋白依赖性激酶(CDK)7/9与热休克蛋白(HSP)以相互依赖的方式驱动副反应。蛋白抑制应激,如积累的半胱氨酸-硫醇,HSP,泛素-蛋白酶体系统,内质网应激,和展开的蛋白质反应,以及主要在细胞核内的ROS挑衅,通过增强CDK7/CDK9-Rpb1(RNAPII亚基B1)与正向环中的HSPs和蛋白激酶R的相互作用来增强CDK7/CDK9-Rpb1(RNAPII亚基B1)的激活,放大转录调节,从而加剧蛋白毒性,导致启动凋亡。MDA-MB-231乳腺癌和多西他赛抗性OECM-1头颈部癌细胞的异种移植小鼠模型进一步证实了针对肿瘤生长的凋亡诱导。
    结论:我们提出了一种新的调控范式,其中通过核蛋白抑制应激激活CDK7/CDK9-Rpb1介导转录调控以引发癌细胞凋亡。
    BACKGROUND: Paraptosis is a programmed cell death characterized by cytoplasmic vacuolation, which has been explored as an alternative method for cancer treatment and is associated with cancer resistance. However, the mechanisms underlying the progression of paraptosis in cancer cells remain largely unknown.
    METHODS: Paraptosis-inducing agents, CPYPP, cyclosporin A, and curcumin, were utilized to investigate the underlying mechanism of paraptosis. Next-generation sequencing and liquid chromatography-mass spectrometry analysis revealed significant changes in gene and protein expressions. Pharmacological and genetic approaches were employed to elucidate the transcriptional events related to paraptosis. Xenograft mouse models were employed to evaluate the potential of paraptosis as an anti-cancer strategy.
    RESULTS: CPYPP, cyclosporin A, and curcumin induced cytoplasmic vacuolization and triggered paraptosis in cancer cells. The paraptotic program involved reactive oxygen species (ROS) provocation and the activation of proteostatic dynamics, leading to transcriptional activation associated with redox homeostasis and proteostasis. Both pharmacological and genetic approaches suggested that cyclin-dependent kinase (CDK) 7/9 drive paraptotic progression in a mutually-dependent manner with heat shock proteins (HSPs). Proteostatic stress, such as accumulated cysteine-thiols, HSPs, ubiquitin-proteasome system, endoplasmic reticulum stress, and unfolded protein response, as well as ROS provocation primarily within the nucleus, enforced CDK7/CDK9-Rpb1 (RNAPII subunit B1) activation by potentiating its interaction with HSPs and protein kinase R in a forward loop, amplifying transcriptional regulation and thereby exacerbating proteotoxicity leading to initiate paraptosis. The xenograft mouse models of MDA-MB-231 breast cancer and docetaxel-resistant OECM-1 head and neck cancer cells further confirmed the induction of paraptosis against tumor growth.
    CONCLUSIONS: We propose a novel regulatory paradigm in which the activation of CDK7/CDK9-Rpb1 by nuclear proteostatic stress mediates transcriptional regulation to prime cancer cell paraptosis.
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  • 文章类型: Journal Article
    肿瘤抑制蛋白是参与调节各种细胞过程的关键转录因子,如细胞凋亡,DNA修复,细胞周期,衰老,和新陈代谢。肿瘤抑制蛋白p53响应不同类型的应激信号,如缺氧,DNA损伤,营养剥夺,癌基因激活,通过激活或抑制前面提到的靶向过程的不同基因的表达。p53具有通过蛋白质-蛋白质相互作用调节许多其他蛋白质和信号通路的活性的能力,翻译后修饰,或非编码RNA。在许多癌症中,p53被发现突变或失活,导致其肿瘤抑制功能丧失并获得新的致癌特性。肿瘤抑制蛋白p53在其他代谢紊乱如糖尿病的发展中也起作用。肥胖,和脂肪肝。在这次审查中,我们将总结目前有关p53在细胞水平上不同途径和过程中的分子机制和功能的数据和知识,并讨论其对人类健康和疾病的影响。
    The tumor suppressor proteins are key transcription factors involved in the regulation of various cellular processes, such as apoptosis, DNA repair, cell cycle, senescence, and metabolism. The tumor suppressor protein p53 responds to different type of stress signaling, such as hypoxia, DNA damage, nutrient deprivation, oncogene activation, by activating or repressing the expression of different genes that target processes mentioned earlier. p53 has the ability to modulate the activity of many other proteins and signaling pathway through protein-protein interaction, post-translational modifications, or non-coding RNAs. In many cancers the p53 is found to be mutated or inactivated, resulting in the loss of its tumor suppressor function and acquisition of new oncogenic properties. The tumor suppressor protein p53 also plays a role in the development of other metabolic disorders such as diabetes, obesity, and fatty liver disease. In this review, we will summarize the current data and knowledge on the molecular mechanisms and the functions of p53 in different pathways and processes at the cellular level and discuss the its implications for human health and disease.
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  • 文章类型: Journal Article
    本研究调查了节段准确性和核位置对英语作为国际语言(EIL)的可理解性的影响,目的是告知语音规范和教学模式。在阅读任务期间,收集了59个EIL说话者的语音样本,涉及阅读三个不同版本的演讲,每个版本持续大约30到40秒。为了直接比较核应力放置对可理解性的影响,基于这些样本,创建了两个版本的刺激,每个人的不同之处仅在于核应力的位置-正确或不正确。安置的正确性由七个以英语为母语的人确定。八个以英语为母语的人,19-24岁,8个EIL使用者,20-24岁,具有中高级到高级水平,对两个版本的演讲的可理解性进行了评级。结果表明,尽管正确的细胞核放置可以增强英语母语听众的可理解性,它对EIL听众影响不大。EIL语音的分段准确性对本地和EIL听众的可理解性的影响远大于核放置,这表明英语教学应侧重于尽量减少分段错误,以提高EIL使用者的可理解性,尽管正确的核放置有好处。
    This study investigates the impact of segmental accuracy and nucleus placement on the comprehensibility of English as an International Language (EIL), with the aim of informing phonological norms and teaching models. Speech samples from 59 EIL speakers with varying levels of segmental accuracy were collected during a reading task, involving reading a passage in three different versions of speech, each version lasting approximately 30 to 40 s. To directly compare the impact of nuclear stress placement on comprehensibility, based on these samples, two versions of stimuli were created, each differing only in their placement of nuclear stress - either correct or incorrect. The correctness of placements was determined by seven native speakers of English. Eight native English speakers, aged 19-24, and eight EIL speakers, aged 20-24 with an upper-intermediate to advanced proficiency level, rated the comprehensibility of the two versions of speech. Results suggest that while correct nucleus placement enhances comprehensibility for native English listeners, it has little influence on EIL listeners. Segmental accuracy in EIL speech impacts comprehensibility substantially more than nucleus placement on both native and EIL listeners, indicating that English language teaching should focus on minimizing segmental errors to improve comprehensibility for EIL speakers, despite the benefits of correct nucleus placement.
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  • 文章类型: Journal Article
    血管平滑肌细胞(VSMC)是主动脉中层的主要细胞类型,在主动脉疾病中起关键作用。先天免疫是心血管疾病的主要驱动力。
    为了确定先天免疫在VSMC和主动脉病变中的作用,我们对ApoE-/-血管紧张素II(AngII)诱导的主动脉瘤(AAA)时程的主动脉进行了转录组分析,和ApoE-/-动脉粥样硬化时间进程,以及与危险相关的分子模式(DAMPs)刺激的VSMC。
    我们取得了重要发现:1)95%和45%的先天免疫途径上调(UIIP,根据1226个先天性免疫基因的数据)在ApoE-/-AngII诱导的AAA在7天与14天和28天不同,AAA分别显示UIIP的双峰,主峰在7天,次峰在28天;2)ApoE-/-动脉粥样硬化中的所有UIIP在6周时与32周和78周不同(两波);3)分析了另外12个具有1325个细胞因子和趋化因子基因的先天免疫相关基因列表,2022血浆膜蛋白基因,373个分化(CD)标记基因簇,280个核膜蛋白基因,1425个核仁蛋白基因,6750个核质蛋白基因,1496个转录因子(TFs),包括15个先驱TFs,164种组蛋白修饰酶,102个氧化细胞死亡基因,68个坏死细胞死亡基因,和47个外渗基因证实了动脉粥样硬化中的两波炎症和AAA中的双峰炎症;4)DAMPs刺激的VSMC是先天免疫细胞,根据先天免疫基因和来自12个其他列表的基因的上调判断;5)DAMPs刺激的VSMC不仅通过上调7种VSMC塑料细胞类型的82个标志物中的一些来增加转分化潜力,包括成纤维细胞,成骨,成肌纤维细胞,巨噬细胞,脂肪细胞,泡沫细胞,和间充质细胞,而且还有18种新的细胞类型(79种人类细胞类型中具有8065种细胞标记);6)基因缺陷转录组的分析表明抗氧化剂转录因子NRF2抑制,然而,其他五个炎症转录因子和主调节因子,包括AHR,NF-KB,NOX(ROS酶),PERK,SET7促进动脉粥样硬化中12个先天免疫基因的上调,AAA,和DAMP刺激的VSMC;7)SET7和经过训练的促进耐受性的代谢物衣康酸酯均有助于AAA中细胞因子的双峰上调。
    我们的发现为先天免疫反应和核应激在AAA发展中的作用提供了新的见解。动脉粥样硬化,和VSMC免疫学,并为治疗这些重要的心血管和脑血管疾病提供了新的治疗靶点。
    Vascular smooth muscle cells (VSMCs) are the predominant cell type in the medial layer of the aorta, which plays a critical role in aortic diseases. Innate immunity is the main driving force for cardiovascular diseases.
    To determine the roles of innate immunity in VSMC and aortic pathologies, we performed transcriptome analyses on aortas from ApoE-/- angiotensin II (Ang II)-induced aortic aneurysm (AAA) time course, and ApoE-/- atherosclerosis time course, as well as VSMCs stimulated with danger-associated molecular patterns (DAMPs).
    We made significant findings: 1) 95% and 45% of the upregulated innate immune pathways (UIIPs, based on data of 1226 innate immune genes) in ApoE-/- Ang II-induced AAA at 7 days were different from that of 14 and 28 days, respectively; and AAA showed twin peaks of UIIPs with a major peak at 7 days and a minor peak at 28 days; 2) all the UIIPs in ApoE-/- atherosclerosis at 6 weeks were different from that of 32 and 78 weeks (two waves); 3) analyses of additional 12 lists of innate immune-related genes with 1325 cytokine and chemokine genes, 2022 plasma membrane protein genes, 373 clusters of differentiation (CD) marker genes, 280 nuclear membrane protein genes, 1425 nucleoli protein genes, 6750 nucleoplasm protein genes, 1496 transcription factors (TFs) including 15 pioneer TFs, 164 histone modification enzymes, 102 oxidative cell death genes, 68 necrotic cell death genes, and 47 efferocytosis genes confirmed two-wave inflammation in atherosclerosis and twin-peak inflammation in AAA; 4) DAMPs-stimulated VSMCs were innate immune cells as judged by the upregulation of innate immune genes and genes from 12 additional lists; 5) DAMPs-stimulated VSMCs increased trans-differentiation potential by upregulating not only some of 82 markers of 7 VSMC-plastic cell types, including fibroblast, osteogenic, myofibroblast, macrophage, adipocyte, foam cell, and mesenchymal cell, but also 18 new cell types (out of 79 human cell types with 8065 cell markers); 6) analysis of gene deficient transcriptomes indicated that the antioxidant transcription factor NRF2 suppresses, however, the other five inflammatory transcription factors and master regulators, including AHR, NF-KB, NOX (ROS enzyme), PERK, and SET7 promote the upregulation of twelve lists of innate immune genes in atherosclerosis, AAA, and DAMP-stimulated VSMCs; and 7) both SET7 and trained tolerance-promoting metabolite itaconate contributed to twin-peak upregulation of cytokines in AAA.
    Our findings have provided novel insights on the roles of innate immune responses and nuclear stresses in the development of AAA, atherosclerosis, and VSMC immunology and provided novel therapeutic targets for treating those significant cardiovascular and cerebrovascular diseases.
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  • 文章类型: Journal Article
    TAR DNA-binding protein 43 (TDP43) plays a significant role in familiar and sporadic amyotrophic lateral sclerosis (ALS). The diverse postulated mechanisms by which TDP43 mutations cause the disease are not fully understood. Human wildtype and TDP43 S393L and G294V mutant spinal motor neuron cultures were differentiated from patient-derived iPSCs. Mutant hTDP43 and wildtype motor neuron cultures did not differ in neuron differentiation capacity during early maturation stage. During aging we detected a dramatic neurodegeneration including neuron loss and pathological neurofilament abnormalities only in TDP43 mutant cultures. Additionally mitochondria and lysosomes of aging spinal motor neurons revealed robust TDP43 mutation dependent abnormal phenotypes in size, shape, speed and motility which all appeared without TDP43 mislocalization or aggregation formation. Furthermore, D-sorbitol - known to induce stress granules and cytoplasmic mislocalization of TDP43 - rescued axonal trafficking phenotypes without signs of TDP43 mislocalization or aggregation formation. Our data indicate TDP43 mutation-dependent but cytosolic aggregation-independent mechanisms of motor neuron degeneration in TDP43 ALS.
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