Niche regulation

  • 文章类型: Journal Article
    背景:严重的情况下,角膜上皮功能障碍或缺乏会导致视力障碍或失明。角膜上皮细胞的快速有效再生依赖于角膜缘干细胞(LSC)。然而,LSCs及其小生境细胞对损伤的分子和功能反应仍然难以捉摸。
    方法:对来自正常小鼠和角膜上皮缺损模型的角膜组织进行单细胞RNA测序。进行生物信息学分析以确认LSC的独特特征和细胞命运。进行了Creb5和OSM治疗实验的击倒以确定它们在角膜上皮伤口愈合中的作用。
    结果:我们的数据定义了LSCs的分子特征,并重建了角膜上皮细胞的假时间轨迹。基因网络分析表征了可能调节LSC动力学的转录标志,并鉴定了转录因子Creb5,该转录因子在LSCs中表达并在损伤后显著上调。功能丧失实验表明,沉默Creb5会延迟角膜上皮愈合和LSC动员。通过细胞间通讯分析,我们确定了609个候选再生相关的配体-受体相互作用对LSCs和不同的小生境细胞之间,并在损伤后发现了一个独特的Arg1+巨噬细胞亚群,它们作为制瘤素M(OSM)的来源存在,IL-6家族细胞因子,被证明可以有效地加速角膜上皮伤口的愈合。
    结论:本研究为发现眼表重建的机制和潜在的临床干预措施提供了宝贵的单细胞资源和参考。
    BACKGROUND: Dysfunction or deficiency of corneal epithelium results in vision impairment or blindness in severe cases. The rapid and effective regeneration of corneal epithelial cells relies on the limbal stem cells (LSCs). However, the molecular and functional responses of LSCs and their niche cells to injury remain elusive.
    METHODS: Single-cell RNA sequencing was performed on corneal tissues from normal mice and corneal epithelium defect models. Bioinformatics analysis was performed to confirm the distinct characteristics and cell fates of LSCs. Knockdown of Creb5 and OSM treatment experiment were performed to determine their roles of in corneal epithelial wound healing.
    RESULTS: Our data defined the molecular signatures of LSCs and reconstructed the pseudotime trajectory of corneal epithelial cells. Gene network analyses characterized transcriptional landmarks that potentially regulate LSC dynamics, and identified a transcription factor Creb5, that was expressed in LSCs and significantly upregulated after injury. Loss-of-function experiments revealed that silencing Creb5 delayed the corneal epithelial healing and LSC mobilization. Through cell-cell communication analysis, we identified 609 candidate regeneration-associated ligand-receptor interaction pairs between LSCs and distinct niche cells, and discovered a unique subset of Arg1+ macrophages infiltrated after injury, which were present as the source of Oncostatin M (OSM), an IL-6 family cytokine, that were demonstrated to effectively accelerate the corneal epithelial wound healing.
    CONCLUSIONS: This research provides a valuable single-cell resource and reference for the discovery of mechanisms and potential clinical interventions aimed at ocular surface reconstruction.
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  • 文章类型: Journal Article
    造血干细胞(HSC),控制着所有血液谱系的产生,通过一系列以胎儿发育过程中扩张为特征的功能状态转变,成年后的功能静止,随着年龄的增长而下降。我们描述了个体发育过程中HSC调节的主要特征,以了解生物体生命过程中的适应性反应如何最终形成HSC功能随年龄增长而退化的基础。我们特别关注细胞周期调控的作用,炎症反应途径,表观遗传变化,和代谢调节。然后,我们探讨了HSC调节中与年龄相关的变化的知识如何为旧HSC的复兴策略提供信息。
    Hematopoietic stem cells (HSCs), which govern the production of all blood lineages, transition through a series of functional states characterized by expansion during fetal development, functional quiescence in adulthood, and decline upon aging. We describe central features of HSC regulation during ontogeny to contextualize how adaptive responses over the life of the organism ultimately form the basis for HSC functional degradation with age. We particularly focus on the role of cell cycle regulation, inflammatory response pathways, epigenetic changes, and metabolic regulation. We then explore how the knowledge of age-related changes in HSC regulation can inform strategies for the rejuvenation of old HSCs.
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  • 文章类型: Journal Article
    角膜上皮由眼外表面上的复层鳞状上皮细胞组成,作为保护屏障,对清晰和稳定的视力至关重要。其持续更新或伤口愈合有赖于角膜缘干细胞(LSCs)的增殖和分化,位于边缘高度调节的生态位的细胞群。LSCs或其生态位的功能障碍可导致角膜缘干细胞缺乏,一种表现为上皮伤口愈合失败甚至失明的疾病。然而,与其他组织中的干细胞相比,对LSCs及其生态位知之甚少。随着单细胞RNA测序的出现,我们对LSC特征及其微环境的理解已经大大增加。在这次审查中,我们总结了角膜研究领域中单细胞研究的最新发现,并重点介绍了由该技术驱动的重要进展,包括LSC群体的异质性,新的LSC标记和LSC生态位的调节,为角膜上皮伤口愈合等临床问题提供参考,眼表重建和相关疾病的干预措施。
    The corneal epithelium is composed of stratified squamous epithelial cells on the outer surface of the eye, which acts as a protective barrier and is critical for clear and stable vision. Its continuous renewal or wound healing depends on the proliferation and differentiation of limbal stem cells (LSCs), a cell population that resides at the limbus in a highly regulated niche. Dysfunction of LSCs or their niche can cause limbal stem cell deficiency, a disease that is manifested by failed epithelial wound healing or even blindness. Nevertheless, compared to stem cells in other tissues, little is known about the LSCs and their niche. With the advent of single-cell RNA sequencing, our understanding of LSC characteristics and their microenvironment has grown considerably. In this review, we summarized the current findings from single-cell studies in the field of cornea research and focused on important advancements driven by this technology, including the heterogeneity of the LSC population, novel LSC markers and regulation of the LSC niche, which will provide a reference for clinical issues such as corneal epithelial wound healing, ocular surface reconstruction and interventions for related diseases.
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  • 文章类型: Journal Article
    果蝇黑腹淋巴腺,造血的主要部位,含有髓样祖细胞,在蛹和成虫的循环中分化为功能性血细胞。飞血细胞是动态的和可塑性的,它们在先天免疫反应和伤口愈合中起着不同的作用。淋巴腺中的各种造血调节剂确保祖细胞和成熟血细胞之间的发育和功能平衡。此外,系统性因素,如营养素的可用性和感官输入,整合环境变化,使淋巴腺中的血液发育与幼虫生长同步,生理学,和豁免权。这篇综述研究了决定淋巴腺血细胞发育过程中祖细胞状态的内在和外在因素,并为进一步的研究提供了新的见解,这些研究可能会扩展我们在造血和先天免疫方面的集体知识的前沿。
    Drosophila melanogaster lymph gland, the primary site of hematopoiesis, contains myeloid-like progenitor cells that differentiate into functional hemocytes in the circulation of pupae and adults. Fly hemocytes are dynamic and plastic, and they play diverse roles in the innate immune response and wound healing. Various hematopoietic regulators in the lymph gland ensure the developmental and functional balance between progenitors and mature blood cells. In addition, systemic factors, such as nutrient availability and sensory inputs, integrate environmental variabilities to synchronize the blood development in the lymph gland with larval growth, physiology, and immunity. This review examines the intrinsic and extrinsic factors determining the progenitor states during hemocyte development in the lymph gland and provides new insights for further studies that may extend the frontier of our collective knowledge on hematopoiesis and innate immunity.
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  • 文章类型: Journal Article
    The regulation of stem cells that maintain and regenerate postnatal tissues depends on extrinsic signals originating from their microenvironment, commonly referred to as the stem cell niche. Complex higher-order regulatory interrelationships with the tissue and factors in the systemic circulation are integrated and propagated to the stem cells through the niche. The stem cell niche in skeletal muscle tissue is both a paradigm for a structurally and functionally relatively static niche that maintains stem cell quiescence during tissue homeostasis, and a highly dynamic regenerative niche that is subject to extensive structural remodeling and a flux of different support cell populations. Conditions ranging from aging to chronically degenerative skeletal muscle diseases affect the composition of the niche and thereby impair the regenerative potential of muscle stem cells. A holistic and integrative understanding of the extrinsic mechanisms regulating muscle stem cells in health and disease in a broad systemic context will be imperative for the identification of regulatory hubs in the niche interactome that can be targeted to maintain, restore, or enhance the regenerative capacity of muscle tissue. Here, we review the microenvironmental regulation of muscle stem cells, summarize how niche dysfunction can contribute to disease, and discuss emerging therapeutic implications.
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  • 文章类型: Journal Article
    The production of red blood cells, termed erythropoiesis, occurs in two waves in the developing mouse embryo: first primitive erythropoiesis followed by definitive erythropoiesis. In the mouse embryo, both primitive and definitive erythropoiesis originates in the extra-embryonic yolk sac. The definitive wave then migrates to the fetal liver, fetal spleen and fetal bone marrow as these organs form. The fetal liver serves as the major organ for hematopoietic cell expansion and erythroid maturation after mid-gestation. The erythropoietic niche, which expresses critical cytokines such as stem cell factor (SCF), thrombopoietin (TPO) and the insulin-like growth factors IGF1 and IGF2, supports hematopoietic expansion in the fetal liver. Previously, our group demonstrated that DLK1+ hepatoblasts support fetal liver hematopoiesis through erythropoietin and SCF release as well as extracellular matrix deposition. Loss of DLK1+ hepatoblasts in Map2k4-/- mouse embryos resulted in decreased numbers of hematopoietic cells in fetal liver. Genes encoding proteinases and peptidases were found to be highly expressed in DLK1+ hepatoblasts. Capitalizing on this knowledge, and working on the assumption that these proteinases and peptidases are generating small, potentially biologically active peptides, we assessed a range of peptides for their ability to support erythropoiesis in vitro. We identified KS-13 (PCT/JP2010/067011) as an erythropoietic peptide-a peptide which enhances the production of red blood cells from progenitor cells. Here, we discuss the elements regulating embryonic erythropoiesis with special attention to niche cells, and demonstrate how this knowledge can be applied in the identification of niche-derived peptides with potential therapeutic capability.
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