Natural indirect effect

自然间接效应
  • 文章类型: Journal Article
    目的:本研究使用美国健康与退休研究中7,698人的数据,量化了48种社会心理结构对全因死亡率的影响。
    方法:使用潜在类别分析将参与者分为相互排斥的社会心理健康组(好,平均,或较差),随后被视为暴露。然后进行中介分析,以确定社会心理健康群体的直接影响以及身体健康(功能状态和合并症)和生活方式因素(身体活动,吸烟,和饮酒)对总体生存率的影响。我们还创建了一个综合健康指数度量,代表了介体的总结性效应。
    结果:我们观察到生存时间和社会心理健康组之间具有很强的统计学意义的总效应(TE)(生存时间比(SR)=1.73,95%置信区间(CI):1.50,2.01当比较好与差时)。中介分析显示,通过心理健康组的直接作用占TE的一半以上(SR=1.46,95%CI:1.27,1.67)。综合健康指数测量介导了36.2%的TE,自然间接效应SR为1.18(95%CI:1.13,1.22)。
    结论:我们的研究结果证明了心理健康与身体健康和生活方式因素之间的相互联系。
    OBJECTIVE: This study quantified the effect of 48 psychosocial constructs on all-cause mortality using data from 7,698 individuals in the U.S. Health and Retirement Study.
    METHODS: Latent class analysis was used to divide participants into mutually exclusive psychosocial wellbeing groups (good, average, or poor) which was subsequently considered as the exposure. Mediation analysis was then conducted to determine the direct effect of the psychosocial wellbeing groups and the indirect (mediating) effects of physical health (functional status and comorbid conditions) and lifestyle factors (physical activity, smoking, and alcohol consumption) on overall survival. We also created a composite health index measure representing the summative effect of the mediators.
    RESULTS: We observed a strong and statistically significant total effect (TE) between survival time and psychosocial wellbeing group (survival time ratio (SR) = 1.73, 95% confidence interval (CI):1.50,2.01 when comparing good to poor). Mediation analysis revealed that the direct effect via psychosocial wellbeing group accounted for more than half of the TE (SR = 1.46, 95% CI:1.27,1.67). The composite health index measure mediated 36.2% of the TE with the natural indirect effect SR of 1.18 (95% CI:1.13,1.22).
    CONCLUSIONS: Our findings demonstrate the interconnectedness between psychosocial wellbeing and physical health and lifestyle factors on survival.
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  • 文章类型: Journal Article
    在因果调解分析中,自然间接效应的非参数识别通常依赖于,除了没有未观察到的暴露前混淆,(i)所谓的“跨世界-计数”独立性和(ii)没有暴露引起的混杂因素的基本假设。当中介是二进制的,当没有做出任何假设时,已经给出了部分识别的界限,或者当仅假设(Ii)时。我们将现有的界限扩展到多体介体的情况,并为仅假设(i)的情况提供界限。我们将这些界限应用于尼日利亚哈佛PEPFAR计划的数据,我们评估抗逆转录病毒治疗对病毒学失败的影响是由患者的依从性介导的程度,并表明对这种效应的推断对模型假设有些敏感。
    In causal mediation analysis, nonparametric identification of the natural indirect effect typically relies on, in addition to no unobserved pre-exposure confounding, fundamental assumptions of (i) so-called \"cross-world-countterfactuals\" independence and (ii) no exposure-induced confounding. When the mediator is binary, bounds for partial identification have been given when neither assumption is made, or alternatively when assuming only (ii). We extend existing bounds to the case of a polytomous mediator, and provide bounds for the case assuming only (i). We apply these bounds to data from the Harvard PEPFAR program in Nigeria, where we evaluate the extent to which the effects of antiretroviral therapy on virological failure are mediated by a patient\'s adherence, and show that inference on this effect is somewhat sensitive to model assumptions.
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  • 文章类型: Journal Article
    中介分析是一种了解干预措施影响后期结果的机制的策略。然而,未观察到的混淆问题可能会在调解分析中复杂化,因为可能有未观察到的暴露结果,暴露调解员,和中介-结果混杂因素。在存在未观察到的混杂因素的情况下,工具变量(IV)是一种流行的识别策略。然而,与使用IV方法来识别和估计非随机暴露的总效应的丰富文献相反,几乎没有研究使用IV作为识别中介间接效应的识别策略.作为回应,我们定义和非参数识别新的估计-双重复杂性介入直接和间接影响-当2,可能相关,IVs是可用的,一个是曝光,另一个是调解人。我们提出非参数,健壮,这些影响的有效估计器,并将其应用于住房券实验。
    Mediation analysis is a strategy for understanding the mechanisms by which interventions affect later outcomes. However, unobserved confounding concerns may be compounded in mediation analyses, as there may be unobserved exposure-outcome, exposure-mediator, and mediator-outcome confounders. Instrumental variables (IVs) are a popular identification strategy in the presence of unobserved confounding. However, in contrast to the rich literature on the use of IV methods to identify and estimate a total effect of a non-randomized exposure, there has been almost no research into using IV as an identification strategy to identify mediational indirect effects. In response, we define and nonparametrically identify novel estimands-double complier interventional direct and indirect effects-when 2, possibly related, IVs are available, one for the exposure and another for the mediator. We propose nonparametric, robust, efficient estimators for these effects and apply them to a housing voucher experiment.
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  • 文章类型: Journal Article
    传统的调解分析,依赖于线性回归模型,由于其对涉及不同类型变量和复杂协变量的情况的适用性有限,因此面临批评,比如互动。这可能导致直接和间接影响的定义不清楚。作为替代,引入了使用反事实框架的因果中介分析,以提供更清晰的直接和间接影响定义,同时允许更灵活的建模方法。然而,基于反事实框架的这种方法的概念理解对于应用研究人员来说仍然具有挑战性。为了解决这个问题,本文旨在强调和说明因果估计的定义,包括受控的直接效应,自然直接效果,和自然的间接影响,基于嵌套反事实的关键概念。此外,我们建议使用2个R包,\'medflex\'和\'中介\',进行因果调解分析并提供公共卫生示例。本文还提供了准确解释结果的警告和指南。
    Traditional mediation analysis, which relies on linear regression models, has faced criticism due to its limited suitability for cases involving different types of variables and complex covariates, such as interactions. This can result in unclear definitions of direct and indirect effects. As an alternative, causal mediation analysis using the counterfactual framework has been introduced to provide clearer definitions of direct and indirect effects while allowing for more flexible modeling methods. However, the conceptual understanding of this approach based on the counterfactual framework remains challenging for applied researchers. To address this issue, the present article was written to highlight and illustrate the definitions of causal estimands, including controlled direct effect, natural direct effect, and natural indirect effect, based on the key concept of nested counterfactuals. Furthermore, we recommend using 2 R packages, \'medflex\' and \'mediation\', to perform causal mediation analysis and provide public health examples. The article also offers caveats and guidelines for accurate interpretation of the results.
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  • 文章类型: Journal Article
    差异方法用于中介分析,以量化介体解释暴露与结果之间途径的潜在机制的程度。在许多健康科学研究中,曝光几乎从来没有测量没有误差,这可能会导致有偏差的效应估计。本文研究了错误测量连续暴露时的中介分析方法。在线性曝光测量误差模型下,我们证明,间接效应和调解比例的偏差可以朝任何方向发展,但当暴露与其易错对应物之间的关联相似时,调解比例通常会较少偏差,无论是否对调解人进行调整。我们进一步提出了调整连续和二元结果的曝光测量误差的方法。拟议的方法需要主要的研究/验证研究设计,其中在验证研究中,数据可用于表征真实暴露与其容易出错的对应物之间的关系。然后将提出的方法应用于卫生专业人员后续研究,1986-2016年,调查体重指数(BMI)作为中介体活动对心血管疾病风险的影响。我们的研究结果表明,体力活动与心血管疾病发病率较低的风险显著相关,在考虑暴露测量误差后,大约一半的身体活动总效应是由BMI介导的。进行了广泛的仿真研究,以证明所提出的方法在有限样本中的有效性和效率。
    The difference method is used in mediation analysis to quantify the extent to which a mediator explains the mechanisms underlying the pathway between an exposure and an outcome. In many health science studies, the exposures are almost never measured without error, which can result in biased effect estimates. This article investigates methods for mediation analysis when a continuous exposure is mismeasured. Under a linear exposure measurement error model, we prove that the bias of indirect effect and mediation proportion can go in either direction but the mediation proportion is usually be less biased when the associations between the exposure and its error-prone counterpart are similar with and without adjustment for the mediator. We further propose methods to adjust for exposure measurement error with continuous and binary outcomes. The proposed approaches require a main study/validation study design where in the validation study, data are available for characterizing the relationship between the true exposure and its error-prone counterpart. The proposed approaches are then applied to the Health Professional Follow-up Study, 1986-2016, to investigate the impact of body mass index (BMI) as a mediator for mediating the effect of physical activity on the risk of cardiovascular diseases. Our results reveal that physical activity is significantly associated with a lower risk of cardiovascular disease incidence, and approximately half of the total effect of physical activity is mediated by BMI after accounting for exposure measurement error. Extensive simulation studies are conducted to demonstrate the validity and efficiency of the proposed approaches in finite samples.
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  • 文章类型: Journal Article
    BACKGROUND: The natural indirect effect (NIE) and mediation proportion (MP) are two measures of primary interest in mediation analysis. The standard approach for mediation analysis is through the product method, which involves a model for the outcome conditional on the mediator and exposure and another model describing the exposure-mediator relationship. The purpose of this article is to comprehensively develop and investigate the finite-sample performance of NIE and MP estimators via the product method.
    METHODS: With four common data types with a continuous/binary outcome and a continuous/binary mediator, we propose closed-form interval estimators for NIE and MP via the theory of multivariate delta method, and evaluate its empirical performance relative to the bootstrap approach. In addition, we have observed that the rare outcome assumption is frequently invoked to approximate the NIE and MP with a binary outcome, although this approximation may lead to non-negligible bias when the outcome is common. We therefore introduce the exact expressions for NIE and MP with a binary outcome without the rare outcome assumption and compare its performance with the approximate estimators.
    RESULTS: Simulation studies suggest that the proposed interval estimator provides satisfactory coverage when the sample size ≥500 for the scenarios with a continuous outcome and sample size ≥20,000 and number of cases ≥500 for the scenarios with a binary outcome. In the binary outcome scenarios, the approximate estimators based on the rare outcome assumption worked well when outcome prevalence less than 5% but could lead to substantial bias when the outcome is common; in contrast, the exact estimators always perform well under all outcome prevalences considered.
    CONCLUSIONS: Under samples sizes commonly encountered in epidemiology and public health research, the proposed interval estimator is valid for constructing confidence interval. For a binary outcome, the exact estimator without the rare outcome assumption is more robust and stable to estimate NIE and MP. An R package mediateP is developed to implement the methods for point and variance estimation discussed in this paper.
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  • 文章类型: Journal Article
    Mediation analysis can be applied to investigate the effect of a third variable on the pathway between an exposure and the outcome. Such applications include investigating the determinants that drive differences in cancer survival across subgroups. However, cancer disparities may be the result of complex mechanisms that involve both cancer-related and other-cause mortality differences making it difficult to identify the causing factors. Relative survival, a commonly used measure in cancer epidemiology, can be used to focus on cancer-related differences. We extended mediation analysis to the relative survival framework for exploring cancer inequalities. The marginal effects were obtained using regression standardization, after fitting a relative survival model. Contrasts of interests included both marginal relative survival and marginal all-cause survival differences between exposure groups. Such contrasts include the indirect effect due to a mediator that is identifiable under certain assumptions. A separate model was fitted for the mediator and uncertainty was estimated using parametric bootstrapping. The avoidable deaths under interventions can also be estimated to quantify the impact of eliminating differences. The methods are illustrated using data for individuals diagnosed with colon cancer. Mediation analysis within relative survival allows focus on factors that account for cancer-related differences instead of all-cause differences and helps improve our understanding on cancer inequalities.
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  • 文章类型: Journal Article
    安装在发电厂上的排放控制技术是美国许多空气污染法规的关键特征。虽然这样的规定是基于排放之间的假定关系,环境空气污染,和人类健康,其中许多关系从未得到经验验证。本文的目标是开发新的统计方法来量化这些关系。我们将此问题定义为调解分析之一,以评估特定控制技术对环境污染的影响通过对发电厂排放的因果影响来调解的程度。由于发电厂排放的各种化合物会造成环境污染,我们开发了同时测量的多个中间变量的新方法,可以彼此互动,并可能表现出联合中介效应。具体来说,我们提出了在存在中介变量的情况下利用两个相关框架进行因果推断的新方法:主要分层和因果中介分析.我们基于多个中介来定义主要效应,并且还将干预对环境污染的总影响的新分解引入所有介质组合的自然直接影响和自然间接影响。两种方法都固定在相同的观测数据模型上,我们用贝叶斯非参数技术指定。我们提供了估计主要因果效应的假设,然后用因果中介分析所需的额外假设来补充这些假设。这两个分析,串联解释,提供对激励重要空气质量监管政策的假定因果途径的首次实证调查。
    Emission control technologies installed on power plants are a key feature of many air pollution regulations in the US. While such regulations are predicated on the presumed relationships between emissions, ambient air pollution, and human health, many of these relationships have never been empirically verified. The goal of this paper is to develop new statistical methods to quantify these relationships. We frame this problem as one of mediation analysis to evaluate the extent to which the effect of a particular control technology on ambient pollution is mediated through causal effects on power plant emissions. Since power plants emit various compounds that contribute to ambient pollution, we develop new methods for multiple intermediate variables that are measured contemporaneously, may interact with one another, and may exhibit joint mediating effects. Specifically, we propose new methods leveraging two related frameworks for causal inference in the presence of mediating variables: principal stratification and causal mediation analysis. We define principal effects based on multiple mediators, and also introduce a new decomposition of the total effect of an intervention on ambient pollution into the natural direct effect and natural indirect effects for all combinations of mediators. Both approaches are anchored to the same observed-data models, which we specify with Bayesian nonparametric techniques. We provide assumptions for estimating principal causal effects, then augment these with an additional assumption required for causal mediation analysis. The two analyses, interpreted in tandem, provide the first empirical investigation of the presumed causal pathways that motivate important air quality regulatory policies.
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  • 文章类型: Journal Article
    社会中的一个重要问题,行为,和健康科学是如何在特定途径效应之间划分暴露效应(例如治疗或风险因素),并量化每个途径的重要性。基于潜在结果框架的中介分析是解决此问题的重要工具,我们在本文中考虑了比例风险模型的中介效应估计。我们给出了总效应的精确定义,自然间接效应,以及生存概率方面的自然直接效应,危险函数,在标准的两阶段调解框架内限制平均生存时间。为了估计不同尺度上的调解效果,我们提出了一个调解公式的方法,其中简单的参数模型(分数多项式或限制三次样条)被用来近似基线对数累积风险函数。模拟研究结果表明,对于各种复杂的危险形状,调解效果估计器的偏差较低,置信区间的覆盖率接近标称。我们将此方法应用于JacksonHeart研究数据,并进行敏感性分析,以评估在不违反未测量的中介者-结果混淆假设时对中介效应推断的影响。
    An important problem within the social, behavioral, and health sciences is how to partition an exposure effect (e.g. treatment or risk factor) among specific pathway effects and to quantify the importance of each pathway. Mediation analysis based on the potential outcomes framework is an important tool to address this problem and we consider the estimation of mediation effects for the proportional hazards model in this paper. We give precise definitions of the total effect, natural indirect effect, and natural direct effect in terms of the survival probability, hazard function, and restricted mean survival time within the standard two-stage mediation framework. To estimate the mediation effects on different scales, we propose a mediation formula approach in which simple parametric models (fractional polynomials or restricted cubic splines) are utilized to approximate the baseline log cumulative hazard function. Simulation study results demonstrate low bias of the mediation effect estimators and close-to-nominal coverage probability of the confidence intervals for a wide range of complex hazard shapes. We apply this method to the Jackson Heart Study data and conduct sensitivity analysis to assess the impact on the mediation effects inference when the no unmeasured mediator-outcome confounding assumption is violated.
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  • 文章类型: Journal Article
    Recent advances in the literature on mediation have extended from traditional linear structural equation modeling approach to causal mediation analysis using potential outcomes framework. Pearl proposed a mediation formula to calculate expected potential outcomes used in the natural direct and indirect effects definition under the key sequential ignorability assumptions. Current methods mainly focused on binary exposure variables, and in this article, this approach is further extended to settings in which continuous exposures may be of interest. Focusing on a dichotomous outcome, we give precise definitions of the natural direct and indirect effects on both the risk difference and odds ratio scales utilizing the empirical joint distribution of the exposure and baseline covariates from the whole sample analysis population. A mediation-formula based approach is proposed to estimate the corresponding causal quantities. Simulation study is conducted to assess the statistical properties of the proposed method and we illustrate our approach by applying it to the Jackson Heart Study to estimate the mediation effects of diabetes on the relation between obesity and chronic kidney disease. Sensitivity analysis is performed to assess the impact of violation of no unmeasured mediator-outcome confounder assumption.
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