NHP

NHP
  • 文章类型: Journal Article
    基于重组腺相关病毒(rAAV)的病毒载体已经成为中枢神经系统(CNS)中用于治疗性基因递送的最广泛使用的系统。尽管在神经学应用中具有临床安全性和有效性,采用当前一代载体的障碍在于它们的效率有限,导致CNS靶细胞的转导有限。为了解决这个限制,研究人员对符合目的的AAV进行了生物工程改造,改善了中枢神经系统嗜性和组织穿透性.虽然这些新型AAV的临床前评估主要在动物模型中进行,人类诱导多能干细胞(hiPSC)衍生的类器官提供了在人类环境中功能评估新型AAV变体的独特机会。在这项研究中,我们对大量野生型和生物工程AAV衣壳在hiPSC来源的脑类器官中的转导效率进行了全面和公正的评估.我们证明,在脑脊液(CSF)递送后,在小鼠和非人灵长类动物模型中体内都可以重现在类器官中观察到的有效AAV转导。总之,我们的研究展示了脑类器官系统在新型AAV载体预筛选中的应用。此外,我们报告了在体内临床前模型中通过CSF递送时表现出改善的CNS转导效率的新型AAV变体的数据.
    Viral vectors based on recombinant adeno-associated virus (rAAV) have become the most widely used system for therapeutic gene delivery in the central nervous system (CNS). Despite clinical safety and efficacy in neurological applications, a barrier to adoption of the current generation of vectors lies in their limited efficiency, resulting in limited transduction of CNS target cells. To address this limitation, researchers have bioengineered fit-for-purpose AAVs with improved CNS tropism and tissue penetration. While the preclinical assessment of these novel AAVs is primarily conducted in animal models, human induced pluripotent stem cell (hiPSC)-derived organoids offer a unique opportunity to functionally evaluate novel AAV variants in a human context. In this study, we performed a comprehensive and unbiased evaluation of a large number of wild-type and bioengineered AAV capsids for their transduction efficiency in hiPSC-derived brain organoids. We demonstrate that efficient AAV transduction observed in organoids was recapitulated in vivo in both mouse and non-human primate models after cerebrospinal fluid (CSF) delivery. In summary, our study showcases the use of brain organoid systems for the pre-screening of novel AAV vectors. Additionally, we report data for novel AAV variants that exhibit improved CNS transduction efficiency when delivered via the CSF in in vivo preclinical models.
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  • 文章类型: Journal Article
    布鲁顿酪氨酸激酶(BTK)在B细胞信号传导中至关重要,是潜在的抗癌和免疫疾病治疗的靶标。由于缺乏直接的BTK参与测量工具,需要改进的选择性可逆BTK抑制剂。有希望的,PET显像可无创评价BTK表达。在这项研究中,放射性标记的BIO-2008846([11C]BIO-2008846-A),BTK抑制剂,用于NHP中的PET成像以跟踪脑生物分布。用碳-11对BIO-2008846进行放射性标记,同时对两个NHP进行四次PET扫描,显示[11C]BIO-2008846-A在NHP大脑中的均匀分布。脑摄取范围从基线时的1.8%ID到预处理后的最大3.2%。研究发现,给药后区域VT值没有显着降低,这意味着与大脑中的游离和非特异性成分相比,[11C]BIO-2008846-A的特异性结合最小。放射性代谢物分析显示极性代谢物在30分钟后具有10%不变的放射性配体。该研究强调了强烈的大脑摄取,尽管分布变异性很小,证实由自由和非特异性结合主导的被动扩散动力学。
    Bruton\'s tyrosine kinase (BTK) is pivotal in B-cell signaling and a target for potential anti-cancer and immunological disorder therapies. Improved selective reversible BTK inhibitors are in demand due to the absence of direct BTK engagement measurement tools. Promisingly, PET imaging can non-invasively evaluate BTK expression. In this study, radiolabeled BIO-2008846 ([11C]BIO-2008846-A), a BTK inhibitor, was used for PET imaging in NHPs to track brain biodistribution. Radiolabeling BIO-2008846 with carbon-11, alongside four PET scans on two NHPs each, showed a homogeneous distribution of [11C]BIO-2008846-A in NHP brains. Brain uptake ranged from 1.8% ID at baseline to a maximum of 3.2% post-pretreatment. The study found no significant decrease in regional VT values post-dose, implying minimal specific binding of [11C]BIO-2008846-A compared to free and non-specific components in the brain. Radiometabolite analysis revealed polar metabolites with 10% unchanged radioligand after 30 min. The research highlighted strong brain uptake despite minor distribution variability, confirming passive diffusion kinetics dominated by free and non-specific binding.
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  • 文章类型: Journal Article
    利用由诱导多能干细胞(iPSC-CM)产生的心肌细胞的细胞疗法提供了作为慢性缺血性心脏病治疗的心脏再生的潜在途径。这里,我们报告了成功的长期植入和体内成熟的自体iPSC-CM在两个恒河猴与小,亚临床慢性心肌梗塞,都没有免疫抑制。使用钠/碘转运体(NIS)报告基因的纵向正电子发射断层扫描成像显示,移植物稳定超过6个月和12个月,没有畸胎瘤形成.组织学分析表明,移植的iPSC-CM成熟并与内源性心肌整合的能力,没有免疫细胞浸润或排斥的迹象。相比之下,同种异体iPSC-CM在移植后8周内被排斥。这项研究提供了迄今为止在任何大型动物模型中最长期的安全性和成熟度数据。解决了关于自体iPSC疗法的新抗原免疫反应性的问题,并表明自体iPSC-CM将类似地植入并在人类心脏中成熟。
    Cellular therapies with cardiomyocytes produced from induced pluripotent stem cells (iPSC-CMs) offer a potential route to cardiac regeneration as a treatment for chronic ischemic heart disease. Here, we report successful long-term engraftment and in vivo maturation of autologous iPSC-CMs in two rhesus macaques with small, subclinical chronic myocardial infarctions, all without immunosuppression. Longitudinal positron emission tomography imaging using the sodium/iodide symporter (NIS) reporter gene revealed stable grafts for over 6 and 12 months, with no teratoma formation. Histological analyses suggested capability of the transplanted iPSC-CMs to mature and integrate with endogenous myocardium, with no sign of immune cell infiltration or rejection. By contrast, allogeneic iPSC-CMs were rejected within 8 weeks of transplantation. This study provides the longest-term safety and maturation data to date in any large animal model, addresses concerns regarding neoantigen immunoreactivity of autologous iPSC therapies, and suggests that autologous iPSC-CMs would similarly engraft and mature in human hearts.
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  • 文章类型: Journal Article
    有效治疗患者的炭疽相关脑膜炎构成了重大的治疗挑战。以前,我们在我们的炭疽脑膜炎兔模型中证明,环丙沙星治疗对大多数感染致死的动物无效。在本文中,我们测试了强力霉素在我们的兔模型中的功效,并且发现其高度有效。因为我们所有的发现都是基于兔子模型,我们在非人灵长类动物(NHP)中建立的特定中枢神经系统(CNS)模型中测试环丙沙星或多西环素的疗效.类似于兔子,环丙沙星治疗无效,而多西环素保护受感染的恒河猴(n=2)免受致命的CNS炭疽杆菌感染。为了测试环丙沙星的低功效是否是所有氟喹诺酮类药物或仅此物质的低功效的示例,我们用左氧氟沙星或莫西沙星治疗接种大胸内(ICM)的兔子。我们发现与环丙沙星相比,左氧氟沙星和莫西沙星在治疗兔和NHP(左氧氟沙星)的致命炭疽相关脑膜炎方面非常有效。我们证明(在幼稚的兔子中),这种差异可能是由于不同氟喹诺酮类药物的血脑屏障渗透差异所致。多西环素和任何一种测试的氟喹诺酮类药物的联合治疗在兔CNS感染模型中非常有效。多西环素和左氧氟沙星联合治疗对吸入兔模型有效,和强力霉素单一疗法一样好.这些发现表明,虽然环丙沙星作为暴露后预防药物非常有效,应重新考虑使用这种药物治疗有症状的患者。
    Efficient treatment of anthrax-related meningitis in patients poses a significant therapeutic challenge. Previously, we demonstrated in our anthrax meningitis rabbit model that ciprofloxacin treatment is ineffective with most of the treated animals succumbing to the infection. Herein we tested the efficacy of doxycycline in our rabbit model and found it highly effective. Since all of our findings are based on a rabbit model, we test the efficacy of ciprofloxacin or doxycycline in a specific central nervous system (CNS) model developed in non-human primates (NHPs). Similar to rabbits, ciprofloxacin treatment was ineffective, while doxycycline protected the infected rhesus macaques (n = 2) from the lethal CNS Bacillus anthracis infection. To test whether the low efficacy of Ciprofloxacin is an example of low efficacy of all fluoroquinolones or only this substance, we treated rabbits that were inoculated intracisterna magna (ICM) with levofloxacin or moxifloxacin. We found that in contrast to ciprofloxacin, levofloxacin and moxifloxacin were highly efficacious in treating lethal anthrax-related meningitis in rabbits and NHP (levofloxacin). We demonstrated (in naïve rabbits) that this difference probably results from variances in blood-brain-barrier penetration of the different fluoroquinolones. The combined treatment of doxycycline and any one of the tested fluoroquinolones was highly effective in the rabbit CNS infection model. The combined treatment of doxycycline and levofloxacin was effective in an inhalation rabbit model, as good as the doxycycline mono-therapy. These findings imply that while ciprofloxacin is highly effective as a post-exposure prophylactic drug, using this drug to treat symptomatic patients should be reconsidered.
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  • 文章类型: Journal Article
    登革热病毒(DENV)是一个巨大的全球健康负担,世界上50%的人口面临感染风险,迫切需要下一代疫苗。基于病毒样颗粒(VLP)的疫苗,模拟病毒的抗原结构,但缺乏病毒基因组,是一种有吸引力的方法。这里,我们描述了一种登革热VLP(DENVLP)疫苗,该疫苗在100%免疫的非人灵长类动物中产生针对所有4种DENV血清型的中和抗体应答长达1年。此外,DENVLP疫苗接种在体外不产生针对四种DENV血清型中的任一种的ADE应答。DENVLP疫苗接种减少了非人灵长类动物攻击模型中的病毒复制。我们还表明,将纯化的IgG从免疫猴子转移到免疫缺陷小鼠中可以防止随后的致死性DENV攻击,表明了体液保护机制。这些结果表明该DENVLP疫苗是免疫原性的并且可以考虑用于临床评估。用四价DENVLP疫苗免疫非人灵长类动物诱导高水平的中和抗体并降低所有四种登革热血清型的感染严重性。IMPORTANCE登革热是一种病毒性疾病,感染全球近4亿人,并导致登革热出血热,每年造成一万人死亡。目前,没有许可治疗登革热感染的治疗药物,这使得开发有效的疫苗至关重要。病毒样颗粒(VLP)是一种安全且高度免疫原性的平台,可用于幼儿,免疫受损的个体,以及健康的成年人。在这项研究中,我们描述了登革热VLP疫苗的开发,并证明它在猴子中诱导针对登革热病毒的强大免疫应答超过1年。该疫苗诱导的免疫减少了鼠类和非人灵长类动物模型中的活登革热感染。这些结果表明我们的登革热VLP疫苗是有希望的候选疫苗。
    Dengue virus (DENV) represents a significant global health burden, with 50% of the world\'s population at risk of infection, and there is an urgent need for next-generation vaccines. Virus-like particle (VLP)-based vaccines, which mimic the antigenic structure of the virus but lack the viral genome, are an attractive approach. Here, we describe a dengue VLP (DENVLP) vaccine which generates a neutralizing antibody response against all four DENV serotypes in 100% of immunized non-human primates for up to 1 year. Additionally, DENVLP vaccination produced no ADE response against any of four DENV serotypes in vitro. DENVLP vaccination reduces viral replication in a non-human primate challenge model. We also show that transfer of purified IgG from immunized monkeys into immunodeficient mice protects against subsequent lethal DENV challenge, indicating a humoral mechanism of protection. These results indicate that this DENVLP vaccine is immunogenic and can be considered for clinical evaluation. Immunization of non-human primates with a tetravalent DENVLP vaccine induces high levels of neutralizing antibodies and reduces the severity of infection for all four dengue serotypes.IMPORTANCEDengue is a viral disease that infects nearly 400 million people worldwide and causes dengue hemorrhagic fever, which is responsible for 10,000 deaths each year. Currently, there is no therapeutic drug licensed to treat dengue infection, which makes the development of an effective vaccine essential. Virus-like particles (VLPs) are a safe and highly immunogenic platform that can be used in young children, immunocompromised individuals, as well as healthy adults. In this study, we describe the development of a dengue VLP vaccine and demonstrate that it induces a robust immune response against the dengue virus for over 1 year in monkeys. The immunity induced by this vaccine reduced live dengue infection in both murine and non-human primate models. These results indicate that our dengue VLP vaccine is a promising vaccine candidate.
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  • 文章类型: Journal Article
    遗传多样性的猿猴动脉炎病毒(simarterivirus)自然感染地理和系统发育多样性的猴子,跨物种传播和出现是相当令人担忧的。除了序列分析之外,大多数simarteri病毒的表征是不可能的,因为这些病毒无法在实验室中繁殖。我们试图分离4种simarterivirus,Kibale红疣病毒1,Pebjah病毒,猿猴出血热病毒,和西南狒狒病毒1,通过接种一个永生化的grivet细胞系(已知复制猿猴出血热病毒),原代猕猴细胞,来自猕猴诱导多能干细胞的巨噬细胞,和移植有猕猴CD34+富集的造血干细胞的小鼠。共同努力导致成功的病毒分离;然而,对于所有4种simarterivirus,没有一种方法是成功的.我们描述了几种可用于分离其他simarterivirus进行表型表征的方法。我们的结果将加快simarterivirus的实验室研究,以阐明病毒与宿主的相互作用,评估人畜共患病风险,并制定医疗对策。
    Genetically diverse simian arteriviruses (simarteriviruses) naturally infect geographically and phylogenetically diverse monkeys, and cross-species transmission and emergence are of considerable concern. Characterization of most simarteriviruses beyond sequence analysis has not been possible because the viruses fail to propagate in the laboratory. We attempted to isolate 4 simarteriviruses, Kibale red colobus virus 1, Pebjah virus, simian hemorrhagic fever virus, and Southwest baboon virus 1, by inoculating an immortalized grivet cell line (known to replicate simian hemorrhagic fever virus), primary macaque cells, macrophages derived from macaque induced pluripotent stem cells, and mice engrafted with macaque CD34+-enriched hematopoietic stem cells. The combined effort resulted in successful virus isolation; however, no single approach was successful for all 4 simarteriviruses. We describe several approaches that might be used to isolate additional simarteriviruses for phenotypic characterization. Our results will expedite laboratory studies of simarteriviruses to elucidate virus-host interactions, assess zoonotic risk, and develop medical countermeasures.
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  • 文章类型: Journal Article
    乌干达最近一次苏丹病毒(SUDV)爆发于2022年9月首次发现,导致164例实验室确诊病例和77例死亡。没有针对SUDV的批准疫苗。这里,我们研究了ChAdOx1-biEBOV在食蟹猴中使用初免或初免-加强方案的保护效果.ChAdOx1-biEBOV是编码SUDV和埃博拉病毒(EBOV)糖蛋白(GPs)的复制缺陷型猿猴腺病毒载体。肌内接种诱导SUDV和EBOVGP特异性IgG应答和中和抗体。在挑战SUDV时,接种疫苗的动物表现出疾病的迹象,就像在对照动物中观察到的那样,所有三组的生存结局均无差异.尸检后获得的血液样本和组织样本中的病毒载量在组间没有显着差异。总的来说,这项研究强调了在多种动物模型中评估疫苗的重要性,并证明了了解在动物模型和人类宿主中的保护效力的重要性.
    The most recent Sudan virus (SUDV) outbreak in Uganda was first detected in September 2022 and resulted in 164 laboratory-confirmed cases and 77 deaths. There are no approved vaccines against SUDV. Here, we investigated the protective efficacy of ChAdOx1-biEBOV in cynomolgus macaques using a prime or a prime-boost regimen. ChAdOx1-biEBOV is a replication-deficient simian adenovirus vector encoding SUDV and Ebola virus (EBOV) glycoproteins (GPs). Intramuscular vaccination induced SUDV and EBOV GP-specific IgG responses and neutralizing antibodies. Upon challenge with SUDV, vaccinated animals showed signs of disease like those observed in control animals, and no difference in survival outcomes were measured among all three groups. Viral load in blood samples and in tissue samples obtained after necropsy were not significantly different between groups. Overall, this study highlights the importance of evaluating vaccines in multiple animal models and demonstrates the importance of understanding protective efficacy in both animal models and human hosts.
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  • 文章类型: Journal Article
    非人类灵长类动物在神经科学研究中被广泛用作人类大脑的模型,恒河猴就是一个突出的例子。我们先前已经引入了一组纤维束成像协议(XTRACT),用于在人类和猕猴大脑中重建42个相应的白质(WM)束,并使用此类束作为WM地标进行了跨物种比较。我们的原始XTRACT方案是使用F99猕猴脑模板开发的。然而,额外的猕猴模板大脑变得越来越普遍。这里,我们在五个猕猴大脑模板中推广了XTRACT纤维束成像协议定义,包括F99,D99,INIA,Yerkes和NMT.我们以两种方式证明了此类协议的等效性:(a)首先,通过比较使用跨考虑的不同模板定义的协议得出的片段的主体,(b)其次,在两个跨物种(人-猕猴)比较任务中,通过不同模板比较重建束的投影模式。结果证实了所有预测的相似性,无论使用的猕猴大脑模板如何,为这些纤维束造影方案在五个考虑的模板中的普遍性提供直接证据。
    Non-human primates are extensively used in neuroscience research as models of the human brain, with the rhesus macaque being a prominent example. We have previously introduced a set of tractography protocols (XTRACT) for reconstructing 42 corresponding white matter (WM) bundles in the human and the macaque brain and have shown cross-species comparisons using such bundles as WM landmarks. Our original XTRACT protocols were developed using the F99 macaque brain template. However, additional macaque template brains are becoming increasingly common. Here, we generalise the XTRACT tractography protocol definitions across five macaque brain templates, including the F99, D99, INIA, Yerkes and NMT. We demonstrate equivalence of such protocols in two ways: (a) Firstly by comparing the bodies of the tracts derived using protocols defined across the different templates considered, (b) Secondly by comparing the projection patterns of the reconstructed tracts across the different templates in two cross-species (human-macaque) comparison tasks. The results confirm similarity of all predictions regardless of the macaque brain template used, providing direct evidence for the generalisability of these tractography protocols across the five considered templates.
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  • 文章类型: Journal Article
    我们分析了毒理学研究的回顾性数据,这些研究涉及对21只食蟹猴和15只恒河猴施用高剂量的表达不同治疗性转基因的腺相关病毒。我们还进行了前瞻性研究,以调查对10只恒河猴进行高剂量全身给药后的急性毒性。毒性的特点是转氨酶,血小板减少症,和替代补体途径激活在给药后第3天达到峰值。虽然大多数动物都康复了,一些腹水发达,全身性水肿,高胆红素血症,和/或凝血障碍促使计划外安乐死。通过假设驱动的组织病理学和无偏单核RNA测序分析来自恢复的动物和死于毒性的那些的计划外尸检的研究终点肝脏。所有肝细胞类型在随后降低的早期计划外时间点表达高转基因转录物水平。血小板减少与通过免疫组织学和单核RNA测序鉴定的正弦血小板微血栓和正弦内皮损伤同时发生。急性毒性,正弦损伤,与治疗性转基因和剂量≥1×1014GC/kg的增强绿色荧光蛋白类似地观察到肝血小板隔离,这表明是大剂量全身性腺相关病毒给药的结果,绿色荧光蛋白没有毒性。这些发现强调了大剂量静脉内腺相关病毒对非人灵长类动物肝脏微脉管系统的潜在毒性作用。
    We analyzed retrospective data from toxicology studies involving administration of high doses of adeno-associated virus expressing different therapeutic transgenes to 21 cynomolgus and 15 rhesus macaques. We also conducted prospective studies to investigate acute toxicity following high-dose systemic administration of enhanced green fluorescent protein-expressing adeno-associated virus to 10 rhesus macaques. Toxicity was characterized by transaminitis, thrombocytopenia, and alternative complement pathway activation that peaked on post-administration day 3. Although most animals recovered, some developed ascites, generalized edema, hyperbilirubinemia, and/or coagulopathy that prompted unscheduled euthanasia. Study endpoint livers from animals that recovered and from unscheduled necropsies of those that succumbed to toxicity were analyzed via hypothesis-driven histopathology and unbiased single-nucleus RNA sequencing. All liver cell types expressed high transgene transcript levels at early unscheduled timepoints that subsequently decreased. Thrombocytopenia coincided with sinusoidal platelet microthrombi and sinusoidal endothelial injury identified via immunohistology and single-nucleus RNA sequencing. Acute toxicity, sinusoidal injury, and liver platelet sequestration were similarly observed with therapeutic transgenes and enhanced green fluorescent protein at doses ≥1 × 1014 GC/kg, suggesting it was the consequence of high-dose systemic adeno-associated virus administration, not green fluorescent protein toxicity. These findings highlight a potential toxic effect of high-dose intravenous adeno-associated virus on nonhuman primate liver microvasculature.
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  • 文章类型: Journal Article
    在之前的狒狒研究中,共鉴定了29个基因用于血液学的临床结果预测,急性,辐射,综合征(H-ARS)严重程度。其中,四个基因(FDXR,DDB2,POU2AF1,WNT3)似乎很有希望,并在五名白血病患者中得到了验证。在这项研究中,我们在大量接受全身照射的患者中寻求进一步的体内验证.
    在2-12Gy的分次(2Gy/天)全身照射(TBI)期间,从10名白血病患者中抽取外周血。RNA分离后,使用qRT-PCR对广泛用于生物剂量学和H-ARS预测的31个基因进行了基因表达(GE)评估。定制的低密度阵列(LDA)允许同时分析所有基因,96孔格式进一步检查了四个最有希望的基因。计算GE相对于预辐照的倍数变化(FC)。
    五名分别患有非霍奇金淋巴瘤(NHL)的急性淋巴细胞白血病(ALL)患者显示出足够的RNA量以及相应的淋巴细胞和中性粒细胞计数,以进行qRT-PCR,而急性髓系白血病(AML)和一名骨髓纤维化患者无法提供足够的RNA。一般来说,分离出1-2微克总RNA,而在暴露前和暴露样品中,RNA数量差异高达10倍(相关的抑制GE变化).来自31个基因,23在至少一个暴露前样品中表达。相对于曝光前,在辐照后48和72h,表达基因的数量可以减少一半。使用LDA,在人类样品中验证了13个基因。四个最有前途的基因(vid。sup.)要么不确定,要么太接近暴露前。然而,它们是用更灵敏的96孔格式测量的,除了无法检测到的WNT3.和以前的研究一样,在白血病患者中,GE对FDXR的调节(上调)相对于狒狒(下调)被再次确认.辐射诱导的DDB2(上调)和POU2AF1(下调)的GE变化在两个物种中的表现相似。因此,两个物种的23个基因中的16个显示出相同方向的GE变化,和在人体研究中上调的FDXR被重新验证。
    确定用于H-ARS严重程度预测的基因,以前在狒狒中检测到,在ALL中得到验证,但在AML患者中没有得到验证。与白血病类型有关的局限性,相关的减少的RNA量,抑制了GE的变化,和方法学上的挑战必须被视为对验证基因总数产生负面影响的因素。基于此,我们提出了额外的对照,包括血细胞计数和优选基于荧光的RNA数量测量,用于选择有希望的样品,并对基线拷贝数低的候选基因使用更灵敏的96孔格式.
    UNASSIGNED: In a previous baboon-study, a total of 29 genes were identified for clinical outcome prediction of the hematologic, acute, radiation, syndrome (H-ARS) severity. Among them, four genes (FDXR, DDB2, POU2AF1, WNT3) appeared promising and were validated in five leukemia patients. Within this study, we sought further in-vivo validation in a larger number of whole-body irradiated patients.
    UNASSIGNED: Peripheral blood was drawn from 10 leukemia patients before and up to 3 days during a fractionated (2 Gy/day) total-body irradiation (TBI) with 2-12Gy. After RNA-isolation, gene expression (GE) was evaluated on 31 genes widely used in biodosimetry and H-ARS prediction employing qRT-PCR. A customized low-density-array (LDA) allowed simultanously analyzing all genes, the 96-well format further examined the four most promising genes. Fold-changes (FC) in GE relative to pre-irradiation were calculated.
    UNASSIGNED: Five patients suffering from acute-lymphoblastic-leukemia (ALL) respectively non-Hodgkin-lymphoma (NHL) revealed sufficient RNA-amounts and corresponding lymphocyte and neutrophile counts for running qRT-PCR, while acute-myeloid-leukemia (AML) and one myelofibrosis patient could not supply enough RNA. Generally, 1-2µg total RNA was isolated, whereas up to 10-fold differences in RNA-quantities (associated suppressed GE-changes) were identified among pre-exposure and exposure samples. From 31 genes, 23 were expressed in at least one of the pre-exposure samples. Relative to pre-exposure, the number of expressed genes could halve at 48 and 72h after irradiation. Using the LDA, 13 genes were validated in human samples. The four most promising genes (vid. sup.) were either undetermined or too close to pre-exposure. However, they were measured using the more sensitive 96-well format, except WNT3, which wasn´t detectable. As in previous studies, an opposite regulation in GE for FDXR in leukemia patients (up-regulated) relative to baboons (down-regulated) was reconfirmed. Radiation-induced GE-changes of DDB2 (up-regulated) and POU2AF1 (down-regulated) behaved similarly in both species. Hence, 16 out of 23 genes of two species showed GE-changes in the same direction, and up-regulated FDXR as in human studies were revalidated.
    UNASSIGNED: Identified genes for H-ARS severity prediction, previously detected in baboons, were validated in ALL but not in AML patients. Limitations related to leukemia type, associated reduced RNA amounts, suppressed GE changes, and methodological challenges must be considered as factors negatively affecting the total number of validated genes. Based on that, we propose additional controls including blood cell counts and preferably fluorescence-based RNA quantity measurements for selecting promising samples and using a more sensitive 96-well format for candidate genes with low baseline copy numbers.
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