Morchella

羊肚菌
  • 文章类型: Journal Article
    铜绿微囊藻产生的微囊藻毒素(MCs)对动物和人体健康有害,目前没有有效的去除方法。因此,需要开发抑制蓝细菌和去除MC的生物方法。我们鉴定了MB1菌株,确认为羊肚菌,使用形态学和痣进化方法。为了评估菌株MB1对铜绿假单胞菌的影响,我们进行了一项实验,其中我们用羊肚菌MB1接种了铜绿分枝杆菌。在他们共同培养了4张后,接种0.9696ngMB1完全抑制并去除铜绿假单胞菌,同时去除高达95%的MC含量。此外,在他们共同种植的3周内,MB1从铜绿分枝杆菌溶液中去除超过50%的氮和磷。因此,开发有效的MC去除生物技术对于保护环境和人类福祉至关重要。我们在此成功地从其自然栖息地中分离出MB1。该菌株有效地抑制和去除铜绿假单胞菌,并降低铜绿假单胞菌溶液中的氮和磷含量。最重要的是,它表现出强大的消除MC的能力。本研究结果为减轻有害藻华提供了新的方法和技术参考。
    Microcystins (MCs) produced by Microcystis aeruginosa are harmful to animal and human health, and there is currently no effective method for their removal. Therefore, the development of biological approaches that inhibit cyanobacteria and remove MCs is needed. We identified strain MB1, confirmed as Morchella, using morphological and mole-cular evolution methods. To assess the impact of strain MB1 on M. aeruginosa, we conducted an experiment in which we inoculated M. aeruginosa with Morchella strain MB1. After their co-cultivation for 4‍ ‍d, the inoculation with 0.9696‍ ‍g MB1 completely inhibited and removed M. aeruginosa while concurrently removing up to 95% of the MC content. Moreover, within 3‍ ‍d of their co-cultivation, MB1 removed more than 50% of nitrogen and phosphorus from the M. aeruginosa solution. Therefore, the development of effective biological techniques for MC removal is paramount in safeguarding both the environment and human well-being. We herein successfully isolated MB1 from its natural habitat. This strain effectively inhibited and removed M. aeruginosa and also reduced the content of nitrogen and phosphorus in the M. aeruginosa solution. Most importantly, it exhibited a robust capability to eliminate MCs. The present results offer a new method and technical reference for mitigating harmful algal blooms.
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  • 文章类型: Journal Article
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  • 文章类型: Published Erratum
    [这更正了文章DOI:10.3389/fmicb.202.1078663。].
    [This corrects the article DOI: 10.3389/fmicb.2022.1078663.].
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  • 文章类型: Journal Article
    The cultivation of true morels (Morchella spp., Morchellaceae, Ascomycota) has rapidly expanded in recent years, especially in China. Red stipe is a symptom wherein the stipe of morel fruiting bodies becomes red-gray, resulting in the gradual death of the affected fruiting bodies. The impact of red-stipe symptom occurrence on the development and nutritional quality of morel fruiting bodies remains unclear. Herein, morel ascocarps with the red-stipe symptom (R) and normal (N), artificially cultivated in the Fujian Province of China, were selected for the transcriptome and metabolome analysis to study the physiological and biochemical responses of morel fruiting bodies to the red-stipe symptom. Transcriptome data revealed several differentially expressed genes between the R and N groups significantly enriched in the tyrosine, riboflavin, and glycerophospholipid metabolism pathways. Similarly, the differentially accumulated metabolites were mainly assigned to metabolic pathways, including tyrosine, the biosynthesis of plant secondary metabolites, and the biosynthesis of amino acids. Moreover, the transcriptome and metabolome data combination revealed that tyrosine metabolism was the most enriched pathway, which was followed by ATP-binding cassette (ABC) transport, alanine, aspartate, and glutamate metabolism. Overall, the integration of transcriptomic and metabolomic data of M. sextelata affected by red-stipe symptoms identified several important genes, metabolites, and pathways. These findings further improve our understanding of the mechanisms underlying the red-stipe symptom development of M. sextelata and provide new insights into how to optimize its cultivation methods.
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  • 文章类型: Journal Article
    UNASSIGNED:羊肚菌因其分布广泛而成为研究热点,美味的味道,和表型可塑性。青藏高原亚王国(QTP)被称为冰河时代生物多样性的摇篮。然而,羊肚菌在QTP中的多样性研究甚少,特别是在系统发育多样性方面,origin,和生物地理学。
    未经授权:家谱一致性系统发育物种识别(GCPSR,基于贝叶斯进化分析,使用来自内部转录间隔区(ITS)的序列,核大亚基rDNA(nrLSU),平移延伸因子1-α(EF1-α),以及RNA聚合酶II的最大和第二大亚基(RPB1和RPB2)),微分时间估计,祖先区域重建用于推断QTP中羊肚菌的系统发育关系和历史生物地理学。
    未经批准:首先,在QTP中总共识别了18种羊肚菌系统发育物种,包括10个Elata进化枝和8个Esculenta进化枝,共有216个人。其次,18种系统发育物种的差异为50.24-4.20Mya(始新世-上新世),这与QTP中的地质活动密切相关。此外,羊肚菌的祖先可能起源于北方地区(祁连山,Elatacade)和西南地区(香格里拉,QTP的Esculenta进化枝),可能是在白垩纪晚期通过柏林根大陆桥(BLB)和长距离分散(LDD)扩张从北美(Rufobrunnea进化枝)迁移而来的。此外,作为物种起源和多样性的摇篮,QTP中的真菌物种从古近纪开始扩散到欧亚大陆和南非。
    UNASSIGNED:这是第一个报告,羊肚菌的Esculenta和Elata进化枝起源于QTP,因为造山,真菌的快速分化与QTP边缘地区的地质抬升运动和避难密切相关。我们的发现有助于增加羊肚菌的多样性,并为QTP的起源理论提供更多证据。
    UNASSIGNED: Morchella has become a research hotspot because of its wide distribution, delicious taste, and phenotypic plasticity. The Qinghai-Tibet Plateau subkingdoms (QTPs) are known as the cradle of Ice age biodiversity. However, the diversity of Morchella in the QTPs has been poorly investigated, especially in phylogenetic diversity, origin, and biogeography.
    UNASSIGNED: The genealogical concordance phylogenetic species recognition (GCPSR, based on Bayesian evolutionary analysis using sequences from the internal transcribed spacer (ITS), nuclear large subunit rDNA (nrLSU), translation elongation factor 1-α (EF1-α), and the largest and second largest subunits of RNA polymerase II (RPB1 and RPB2)), differentiation time estimation, and ancestral region reconstruction were used to infer Morchella\'s phylogenetic relationships and historical biogeography in the QTPs.
    UNASSIGNED: Firstly, a total of 18 Morchella phylogenetic species are recognized in the QTPs, including 10 Elata clades and 8 Esculenta clades of 216 individuals Secondly, the divergences of the 18 phylogenetic species were 50.24-4.20 Mya (Eocene-Pliocene), which was closely related to the geological activities in the QTPs. Furthermore, the ancestor of Morchella probably originated in the Northern regions (Qilian Shan, Elata cade) and southwestern regions (Shangri-La, Esculenta clade) of QTPs and might have migrated from North America (Rufobrunnea clade) via Beringian Land Bridge (BLB) and Long-Distance Dispersal (LDD) expansions during the Late Cretaceous. Moreover, as the cradle of species origin and diversity, the fungi species in the QTPs have spread out and diffused to Eurasia and South Africa starting in the Paleogene Period.
    UNASSIGNED: This is the first report that Esculenta and Elata clade of Morchella originated from the QTPs because of orogenic, and rapid differentiation of fungi is strongly linked to geological uplift movement and refuge in marginal areas of the QTPs. Our findings contribute to increasing the diversity of Morchella and offer more evidence for the origin theory of the QTPs.
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  • 文章类型: Journal Article
    真正的羊肚菌(Morchella)是一种众所周知的食用菌,具有重要的经济和医学价值。然而,羊肚菌属的分子鉴定和物种分类学长期以来一直存在争议,由于物种之间的许多中间形态。在这项研究中,我们确定了来自45种羊肚菌的260个个体的DNA条形码和物种分类的鉴定效率,基于多个核DNA标记。DNA条形码分析表明,单个DNA片段的物种鉴定分辨率低于组合的多个DNA标记。ITS在各个遗传标记中显示出最高的物种歧视水平。有趣的是,组合的DNA标记显着提高了物种鉴定的分辨率。四个DNA基因的组合(EF1-α,RPB1,RPB2和ITS)显示出比两个或三个标记的任何组合更高的物种定界。系统发育分析表明,羊肚菌属的物种可以分为两个大的遗传进化枝,Elata进化枝和Esculenta进化枝血统。在白垩纪早期,这两个谱系划分了约133.11Mya[95%HPD间隔:82.77-197.95]。然而,羊肚菌的一些系统发育物种显示出与传统形态分类不一致的进化关系,这可能是由于不完全的谱系分类和/或物种之间的渗入杂交所致。这些发现表明,种间基因渗入可能影响了真正羊肚菌的物种鉴定,并且组合的DNA标记显着提高了物种歧视的分辨率。
    True morels (Morchella) are a well-known edible fungi, with economically and medicinally important values. However, molecular identification and species taxonomy of the genus Morchella have long been controversial, due to numerous intermediate morphologies among species. In this study, we determined the identification efficiency of DNA barcoding and species classification of 260 individuals from 45 Morchella species, on the basis of multiple nuclear DNA markers. DNA barcoding analysis showed that the individual DNA fragment has a lower resolution of species identification than that of combined multiple DNA markers. ITS showed the highest level of species discrimination among the individual genetic markers. Interestingly, the combined DNA markers significantly increased the resolution of species identification. A combination of four DNA genes (EF1-α, RPB1, RPB2 and ITS) showed a higher species delimitation than that any combination of two or three markers. Phylogenetic analysis suggested that the species in genus Morchella could have been divided into two large genetic clades, the Elata Clade and Esculenta Clade lineages. The two lineages divided approximately 133.11 Mya [95% HPD interval: 82.77-197.95] in the early Cretaceous period. However, some phylogenetic species of Morchella showed inconsistent evolutionary relationships with the traditional morphological classifications, which may have resulted from incomplete lineage sorting and/or introgressive hybridization among species. These findings demonstrate that the interspecific gene introgression may have affected the species identification of true morels, and that the combined DNA markers significantly improve the resolution of species discrimination.
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  • 文章类型: Journal Article
    羊肚菌和其他羊肚菌的人工栽培在中国正在扩大,但是由于未知的原因,连续种植减少了羊肚菌。这里,我们调查了0年、1年和2年用于或未用于六分枝杆菌栽培的土壤。我们发现,连续种植六甘草可大大降低土壤的pH值和养分含量,并增加六甘草的菌核形成。细菌和真菌群落结构的变化与土壤中有效氮(N)和磷的水平有关。随着连续种植,真菌和细菌群落的丰富和多样性增加,但芽孢杆菌和乳酸菌的丰度下降,病原真菌的丰度增加。FAPROTAX分析表明,连续培养比不连续培养更丰富的N循环功能。第二年的氮循环和硫酸盐呼吸功能的富集比第一年高。FunGuild分析表明,六甘草栽培丰富了与病菌和木腐菌有关的功能。总的来说,结果表明,连作可能通过酸化土壤和增加病原真菌的丰度来减少六甘草的产量。需要进一步的研究来确定病原真菌丰度的增加和土壤化学的变化是否会导致连续的六分枝杆菌种植导致产量下降。
    Artificial cultivation of Morchella sextelata and other morels is expanding in China, but continuous cropping reduces Morchella for unknown reasons. Here, we investigated soil that had been used or not used for M. sextelata cultivation for 0, 1, and 2 years. We found that the continuous cropping of M. sextelata substantially reduced the pH and the nutrient content of the hyphosphere soil and increased sclerotia formation by M. sextelata. Changes in the structure of bacterial and fungal communities were associated with levels of available nitrogen (N) and phosphorus in the soil. With continuous cropping, the richness and diversity of fungal and bacterial communities increased, but the abundance of Bacillus and Lactobacillus decreased and the abundance of pathogenic fungi increased. FAPROTAX analysis indicated that N cycle functions were enriched more with than without continuous cultivation, and that enrichment of N cycle and sulfate respiration functions was higher in the second than in the first year of cultivation. FunGuild analysis indicated that the functions related to pathotrophs and wood saprotrophs were enriched by M. sextelata cultivation. Overall, the results suggest that continuous cropping may reduce M. sextelata production by acidifying the soil and increasing the abundance of pathogenic fungi. Additional research is needed to determine whether increases in the abundance of pathogenic fungi and changes in soil chemistry result in the declines in production that occur with continuous M. sextelata cultivation.
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  • 文章类型: Journal Article
    羊肚菌是一种珍贵的可食用,具有一系列重要作用的药用真菌,包括抗肿瘤和抗氧化作用。根据18个环境变量的数据和野生羊肚菌的分布地点,本研究使用最大熵(MaxEnt)模型来预测羊肚菌物种在不同历史时期的地理分布变化(最后冰川最大值(LGM),中全新世(MH),电流,2050年和2070年)。结果表明,不同时期受试者工作特征曲线的曲线下面积(AUC)值均较高(>0.83),表明最大熵模型的结果是好的。物种分布模型表明,影响羊肚菌物种地理分布的主要因素是最干旱的季度(Bio17)的降水,高程,最冷季度的平均温度(Bio11)和年平均温度(Bio1)。地理分布模拟表明,羊肚菌目前的适宜生境主要位于云南,四川,甘肃,陕西,新疆维吾尔自治区(XUAR)和中国其他省份。与当前时间相比,在LGM和MH时期,西北和东北地区的适宜面积减少。至于未来的时期,与当代相比,在不同的情况下,合适的栖息地都有所增加,呈现向东北和西北地区扩张的趋势。这些结果可以为保护提供理论依据,气候变化情景下野生羊肚菌资源的合理开发利用.
    Morchella is a kind of precious edible, medicinal fungi with a series of important effects, including anti-tumor and anti-oxidation effects. Based on the data of 18 environmental variables and the distribution sites of wild Morchella species, this study used a maximum entropy (MaxEnt) model to predict the changes in the geographic distribution of Morchella species in different historical periods (the Last Glacial Maximum (LGM), Mid Holocene (MH), current, 2050s and 2070s). The results revealed that the area under the curve (AUC) values of the receiver operating characteristic curves of different periods were all relatively high (>0.83), indicating that the results of the maximum entropy model are good. Species distribution modeling showed that the major factors influencing the geographical distribution of Morchella species were the precipitation of the driest quarter (Bio17), elevation, the mean temperature of the coldest quarter (Bio11) and the annual mean temperature (Bio1). The simulation of geographic distribution suggested that the current suitable habitat of Morchella was mainly located in Yunnan, Sichuan, Gansu, Shaanxi, Xinjiang Uygur Autonomous Region (XUAR) and other provinces in China. Compared with current times, the suitable area in Northwest and Northeast China decreased in the LGM and MH periods. As for the future periods, the suitable habitats all increased under the different scenarios compared with those in contemporary times, showing a trend of expansion to Northeast and Northwest China. These results could provide a theoretical basis for the protection, rational exploitation and utilization of wild Morchella resources under scenarios of climate change.
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  • 文章类型: Journal Article
    寻找新的抗癌剂,包括真菌化合物在内的天然产物已被用作潜在的抗癌剂。本研究的目的是研究羊肚菌提取物对结肠癌细胞系的抗癌活性,并通过UPLC-DAD-MS/MS分析鉴定化合物。检查了三种羊肚菌对结肠癌细胞系的抗癌特性的细胞毒性活性。进行植物化学分析以筛选羊肚菌中抗癌化合物的存在。所有真菌提取物均以剂量依赖性方式抑制结肠癌细胞的活力。羊肚菌中鉴定的主要化合物包括氨基酸,脂肪酸,甾醇,类黄酮,肽,谷氨酸,生物碱,萜类,环吡咯酮,还有香豆素.在所有三种羊肚菌提取物中检测到几种新化合物。总之,所有的真菌提取物都显示出对结肠癌细胞的潜在抑制作用,并积极抑制细胞活力。结论是,鉴定出的生物活性化合物可能是羊肚菌抗人结肠癌细胞系抗癌活性的主要成分。因此,羊肚菌提取物是具有细胞毒性的生物活性化合物的潜在来源,可以用作功能性食品补充剂。由于令人印象深刻的发现的性质,应进一步开展这项研究,以便研究探索和开发针对结肠癌的潜在细胞毒性药物.
    In search of new anticancer agents, natural products including fungal compounds had been used as potential anticancer agents. The aim of this study was to investigate the anticancer activity of Morchella extracts against colon cancer cell line and UPLC-DAD-MS/MS analysis for the identification of compounds. The cytotoxic activity of the three Morchella species was examined for their anti-carcinogenic properties against the colon cancer cell lines. Phytochemical analyses were performed to screen Morchella for the presence of anti-cancerous compounds. All the fungal extracts inhibited the viability of colon cancer cells in a dose-dependent manner. Major compounds identified in Morchella included amino acid, fatty acid, sterol, flavonoid, peptide, glutamic acid, alkaloid, terpenoid, cyclopyrrolones, and coumarin. Several new compounds were detected among all the three Morchella extracts. In conclusion, all the fungal extracts showed potential inhibition of colon cancer cells and actively arrested the cell viability. It was concluded that the identified bioactive compounds might be the main constituents contributing to the anticancer activity of Morchella against human colon cancer cell lines. Thus, Morchella extracts are a potential source of bioactive compounds with cytotoxicity and could potentially be used as functional food supplements. Due to the nature of impressive findings, this investigation should be undertaken further to allow the studies to explore and develop a potential cytotoxic agents against colon cancer.
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  • 文章类型: Letter
    羊肚菌是非常珍贵的食用菌,其中有性生殖对于子实体生产至关重要。因此,全面了解他们的有性生殖是非常感兴趣的。核心是识别羊肚菌使用的生殖策略。真菌的有性生殖受交配型(MAT)基因控制,羊肚菌被认为主要是具有两个同态的异生金属,MAT1-1和MAT1-2。黑色(Elata进化枝)和黄色(Esculenta进化枝)羊肚菌物种的基因组测序导致了PCR引物的开发,该PCR引物旨在扩增来自两个独特形态的基因,以对来自这两个进化枝的分离株进行快速基因分型。为了评估这些引物的设计和理论性能,我们进行了彻底的生物信息学调查,包括在公开可用的羊肚菌基因组中检测MAT区域和计算机PCR分析。所有检查过的基因组,包括用于底漆设计的那些,似乎是异性恋。这表明使用单个羊肚菌基因组的原始引物设计存在固有缺陷,因为需要使用具有互补交配类型的两个基因组来设计两个同态的准确引物。此外,确定了一些先前发表的引物组的潜在脱靶,但由于缺乏足够的基因组信息和引物设计的详细方法,验证具有挑战性.对黑羊肚菌特异性引物对(MAT11L/R和MAT22L/R)的检查表明,MAT22引物将正确地靶向并扩增MAT1-2异型,但是MAT11引物似乎能够扩增基因组内不正确的脱靶。黄色羊肚菌引物对(EMAT1-1L/R和EMAT1-2L/R)似乎有报告错误,由于已发表的引物序列与报道的扩增子序列不同,并且EMAT1-2引物似乎扩增了RNA聚合酶II亚基(RPB2)基因。引物设计和描述性方法中使用的参考基因组的缺乏使得完全评估该进化枝的引物的明显问题具有挑战性。总之,仍然需要额外的工作来产生可靠的引物,以研究羊肚菌中的交配类型,并评估它们在不同进化枝和跨多个地理区域的性能。
    Morels are highly prized edible fungi where sexual reproduction is essential for fruiting-body production. As a result, a comprehensive understanding of their sexual reproduction is of great interest. Central to this is the identification of the reproductive strategies used by morels. Sexual reproduction in fungi is controlled by mating-type (MAT) genes and morels are thought to be mainly heterothallic with two idiomorphs, MAT1-1 and MAT1-2. Genomic sequencing of black (Elata clade) and yellow (Esculenta clade) morel species has led to the development of PCR primers designed to amplify genes from the two idiomorphs for rapid genotyping of isolates from these two clades. To evaluate the design and theoretical performance of these primers we performed a thorough bioinformatic investigation, including the detection of the MAT region in publicly available Morchella genomes and in-silico PCR analyses. All examined genomes, including those used for primer design, appeared to be heterothallic. This indicates an inherent fault in the original primer design which utilized a single Morchella genome, as the use of two genomes with complementary mating types would be required to design accurate primers for both idiomorphs. Furthermore, potential off-targets were identified for some of the previously published primer sets, but verification was challenging due to lack of adequate genomic information and detailed methodologies for primer design. Examinations of the black morel specific primer pairs (MAT11L/R and MAT22L/R) indicated the MAT22 primers would correctly target and amplify the MAT1-2 idiomorph, but the MAT11 primers appear to be capable of amplifying incorrect off-targets within the genome. The yellow morel primer pairs (EMAT1-1 L/R and EMAT1-2 L/R) appear to have reporting errors, as the published primer sequences are dissimilar with reported amplicon sequences and the EMAT1-2 primers appear to amplify the RNA polymerase II subunit (RPB2) gene. The lack of the reference genome used in primer design and descriptive methodology made it challenging to fully assess the apparent issues with the primers for this clade. In conclusion, additional work is still required for the generation of reliable primers to investigate mating types in morels and to assess their performance on different clades and across multiple geographical regions.
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