Monogenic

单基因
  • 文章类型: Journal Article
    OBJECTIVE: Deficiency of adenosine deaminase-2 (DADA2) is a monogenic disorder closely resembling polyarteritis nodosa (PAN) and can present to physicians across various specialties. Through this case series, we aim to describe the clinical spectrum and outcome of Indian children with DADA2. We aimed to study the clinical spectrum and outcome of Indian children with DADA-2.
    METHODS: The deidentified data from all participating centres were entered in an excel sheet, and the coordinating centre (All India Institute of Medical Sciences, New Delhi) screened the data for accuracy and completeness.
    RESULTS: We enrolled 16 children (11 females) in the study; the mean (SD) age at the time of onset of symptoms for males and females was 46.2 (47) and 73.6 (50.4) months, respectively. The most common clinical feature in this cohort was fever and rash in 80% of patients. More than half of children n, (%) [8, (53%)] had a CNS stroke. The other clinical features were hypertension [5(33%)], anaemia [3 (20%)] and arthralgia/arthritis in 4 (26%). These children were managed with various immunomodulators: steroids [13, (86%)], anti-TNF agents [(12, (80%)], cyclophosphamide [2 (13%)] and mycophenolate mofetil [3 (20%)]. The median (IQR) duration of follow-up for this cohort was 17 (10, 29) months. Fourteen children achieved remission and none had recurrent strokes after the initiation of anti-TNF drugs.
    CONCLUSIONS: DADA-2 closely resembles PAN; early age of onset and CNS stroke are striking differentiating features from classic PAN. Most children respond well to anti-TNF agents without serious adverse events during short-term follow-up.
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  • 文章类型: Journal Article
    系统性自身炎性疾病(SAIDs)起因于先天免疫系统活性失调,导致全身炎症。这些疾病,包括一系列被归类为先天免疫错误的遗传缺陷,由于其遗传异质性和不同的临床表现,是重大的诊断挑战。尽管基因测序的最新进展促进了致病基因的发现,约40%的SAIDs患者缺乏分子诊断.SAIDs有不同的临床表型,需要有针对性的治疗方法。这篇综述旨在强调SAIDs的复杂性和临床意义。专注于根据其病理生理学分组的典型疾病:(i)炎症病,其特征是过度激活的炎性体,诱导显著的IL-1β释放;(ii)逆转,它们是以NF-κB信号通路内的失调为特征的单基因疾病;(iii)IL-18/IL-36信号通路缺陷诱导的SAIDs,由IL-18/IL-36细胞因子信号失衡定义的自身炎症状态,导致不受控制的炎症和组织损伤,主要在皮肤中;(iv)I型干扰素病,一组以I型干扰素(IFNs)不受控制产生为特征的多样化疾病,特别是干扰素α,β,和ε;(v)抗炎信号通路损伤诱导的SAIDs,特征在于IL-10和TGFβ抗炎途径破坏的一系列病症;和(vi)混杂和多基因SAID。后一组包括VEXAS综合征,慢性复发性多灶性骨髓炎/慢性非细菌性骨髓炎,Schnitzler综合征,和Still\的疾病,其中,说明了SAID的异质性和创建综合分类的难度。涉及靶向药物的治疗策略,如JAK抑制剂,IL-1阻断剂,和TNF抑制剂,针对特定的疾病表型。
    Systemic autoinflammatory diseases (SAIDs) arise from dysregulated innate immune system activity, which leads to systemic inflammation. These disorders, encompassing a diverse array of genetic defects classified as inborn errors of immunity, are significant diagnostic challenges due to their genetic heterogeneity and varied clinical presentations. Although recent advances in genetic sequencing have facilitated pathogenic gene discovery, approximately 40% of SAIDs patients lack molecular diagnoses. SAIDs have distinct clinical phenotypes, and targeted therapeutic approaches are needed. This review aims to underscore the complexity and clinical significance of SAIDs, focusing on prototypical disorders grouped according to their pathophysiology as follows: (i) inflammasomopathies, characterized by excessive activation of inflammasomes, which induces notable IL-1β release; (ii) relopathies, which are monogenic disorders characterized by dysregulation within the NF-κB signaling pathway; (iii) IL-18/IL-36 signaling pathway defect-induced SAIDs, autoinflammatory conditions defined by a dysregulated balance of IL-18/IL-36 cytokine signaling, leading to uncontrolled inflammation and tissue damage, mainly in the skin; (iv) type I interferonopathies, a diverse group of disorders characterized by uncontrolled production of type I interferons (IFNs), notably interferon α, β, and ε; (v) anti-inflammatory signaling pathway impairment-induced SAIDs, a spectrum of conditions characterized by IL-10 and TGFβ anti-inflammatory pathway disruption; and (vi) miscellaneous and polygenic SAIDs. The latter group includes VEXAS syndrome, chronic recurrent multifocal osteomyelitis/chronic nonbacterial osteomyelitis, Schnitzler syndrome, and Still\'s disease, among others, illustrating the heterogeneity of SAIDs and the difficulty in creating a comprehensive classification. Therapeutic strategies involving targeted agents, such as JAK inhibitors, IL-1 blockers, and TNF inhibitors, are tailored to the specific disease phenotypes.
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  • 文章类型: Journal Article
    美国约有3700万人患有慢性肾病,一种包括多种原因的疾病。预计约10%或更多的成人肾脏疾病和约70%的儿童慢性肾脏疾病可由遗传原因解释。尽管基因检测取得了进展,对某些肾脏疾病的遗传基础也有了越来越多的了解,肾病学的基因检测落后于其他医学领域。需要更多地了解基因检测的好处和后勤,以推进基因检测在慢性肾脏疾病中的实施。因此,国家肾脏基金会召集了一个具有不同遗传学专业知识的专家工作组,肾脏病学,和相关领域制定单基因疾病基因检测的建议,并确定肾脏疾病的低基因和多基因原因的遗传风险因素。生成了用于基因检测的临床决策的算法和用于推进肾脏疾病中的基因检测的路线图。该倡议的一个重要方面是使用经修改的德尔菲程序就建议达成小组共识。本文描述的建议和资源为肾脏病学家和专职卫生专业人员提供了支持,以促进将基因测试用于肾脏疾病的诊断和筛查。
    About 37 million people in the United States have chronic kidney disease, a disease that encompasses diseases of multiple causes. About 10% or more of kidney diseases in adults and about 70% of selected chronic kidney diseases in children are expected to be explained by genetic causes. Despite the advances in genetic testing and an increasing understanding of the genetic bases of certain kidney diseases, genetic testing in nephrology lags behind other medical fields. More understanding of the benefits and logistics of genetic testing is needed to advance the implementation of genetic testing in chronic kidney diseases. Accordingly, the National Kidney Foundation convened a Working Group of experts with diverse expertise in genetics, nephrology, and allied fields to develop recommendations for genetic testing for monogenic disorders and to identify genetic risk factors for oligogenic and polygenic causes of kidney diseases. Algorithms for clinical decision making on genetic testing and a road map for advancing genetic testing in kidney diseases were generated. An important aspect of this initiative was the use of a modified Delphi process to reach group consensus on the recommendations. The recommendations and resources described herein provide support to nephrologists and allied health professionals to advance the use of genetic testing for diagnosis and screening of kidney diseases.
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  • 文章类型: Journal Article
    背景:单基因狼疮被定义为系统性红斑狼疮(SLE)/SLE样患者,在单个基因中具有高外显率的显性或隐性遗传致病变异。然而,因为单基因SLE的临床表型广泛且与经典SLE重叠,它会导致诊断和治疗的延迟。目前,缺乏早期识别模型为临床医师提供早期识别线索。我们的目标是建立一个早期识别儿童单基因狼疮的临床模型,从而促进患者的早期和精确诊断和治疗。
    方法:这项回顾性队列研究包括2012年6月至2022年12月在北京协和医院儿科治疗的41例单基因狼疮患者。对照组由按1:2比例招募的经典SLE患者组成。患者以7:3的比例随机分为训练组和验证组。基于最小绝对收缩和选择算子建立逻辑回归模型以生成系数图。使用受试者操作员特征曲线和曲线下面积(AUC)指数评估模型的预测能力。
    结果:共纳入41例单基因狼疮患者和82例经典SLE患者。在单基因性狼疮病例中(男女比例为1:1.05,发病年龄从出生到15岁),共鉴定出18个基因突变.系数图中包括的变量是发病年龄,反复感染,颅内钙化,生长和发育迟缓,肌肉张力异常,淋巴结病/肝脾肿大,还有冻疮样皮疹.我们的模型通过内部验证证明了令人满意的诊断性能,AUC值为0.97(95%置信区间=0.92-0.97)。
    结论:我们总结并分析了儿童单基因狼疮的临床特征,并建立了临床医生早期识别的预测模型。当评分超过-9.032299时,临床医生应高度警惕单基因狼疮。
    BACKGROUND: Monogenic lupus is defined as systemic lupus erythematosus (SLE)/SLE-like patients with either dominantly or recessively inherited pathogenic variants in a single gene with high penetrance. However, because the clinical phenotype of monogenic SLE is extensive and overlaps with that of classical SLE, it causes a delay in diagnosis and treatment. Currently, there is a lack of early identification models for clinical practitioners to provide early clues for recognition. Our goal was to create a clinical model for the early identification of pediatric monogenic lupus, thereby facilitating early and precise diagnosis and treatment for patients.
    METHODS: This retrospective cohort study consisted of 41 cases of monogenic lupus treated at the Department of Pediatrics at Peking Union Medical College Hospital from June 2012 to December 2022. The control group consisted of classical SLE patients recruited at a 1:2 ratio. Patients were randomly divided into a training group and a validation group at a 7:3 ratio. A logistic regression model was established based on the least absolute shrinkage and selection operator to generate the coefficient plot. The predictive ability of the model was evaluated using receiver operator characteristic curves and the area under the curve (AUC) index.
    RESULTS: A total of 41 cases of monogenic lupus patients and 82 cases of classical SLE patients were included. Among the monogenic lupus cases (with a male-to-female ratio of 1:1.05 and ages of onset ranging from birth to 15 years), a total of 18 gene mutations were identified. The variables included in the coefficient plot were age of onset, recurrent infections, intracranial calcifications, growth and developmental delay, abnormal muscle tone, lymphadenopathy/hepatosplenomegaly, and chilblain-like skin rash. Our model demonstrated satisfactory diagnostic performance through internal validation, with an AUC value of 0.97 (95% confidence interval = 0.92-0.97).
    CONCLUSIONS: We summarized and analyzed the clinical characteristics of pediatric monogenic lupus and developed a predictive model for early identification by clinicians. Clinicians should exercise high vigilance for monogenic lupus when the score exceeds - 9.032299.
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  • 文章类型: Journal Article
    单基因和多基因2型糖尿病(T2D)之间的分界不如以前认为的那么明显。值得注意的是,最近的研究强调了一个新的实体,我们建议称T2D的寡基因形式,作为这两种形式之间的遗传联系。在这篇观点文章中,我们回顾了科学进展,这些进展建议对涉及寡基因T2D的基因进行分类.由于无法直接建立信号与疾病背后的分子机制之间的因果关系,专注于多基因T2D的研究在加深我们对T2D病理生理学的理解方面面临挑战。然而,对T2D的寡基因形式的研究揭示了基因与疾病风险之间的明显因果关系,从而表明潜在的新药靶点。
    The demarcation between monogenic and polygenic type 2 diabetes (T2D) is less distinct than previously believed. Notably, recent research has highlighted a new entity, that we suggest calling oligogenic forms of T2D, serving as a genetic link between these two forms. In this opinion article, we have reviewed scientific advances that suggest categorizing genes involved in oligogenic T2D. Research focused on polygenic T2D has faced challenges in deepening our comprehension of the pathophysiology of T2D due to the inability to directly establish causal links between a signal and the molecular mechanisms underlying the disease. However, the study of oligogenic forms of T2D has illuminated distinct causal connections between genes and disease risk, thereby indicating potential new drug targets.
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  • 文章类型: Journal Article
    肾结石越来越常见,影响高达10%的成年人。一小部分是单基因起源的,例如丹特病(DD)。DD是一种导致低分子量蛋白尿的综合征,高钙尿症,肾结石,和肾钙质沉着症。它是X连接的,大多数患者的CLCN5基因突变。我们对文献进行了回顾,并评估了西班牙单个中心的病例系列(n=6),回顾肾结石的自然演变,临床意义,实验室分析,放射学发展,和治疗。所有病人都有基因确诊,与CLCN5突变是最常见的(66%)。所有患者均有蛋白尿和白蛋白尿,只有两例和三例出现高钙尿症和磷酸盐异常,分别。只有一名患者没有出现结石,大多数(60%)在随访期间需要体外冲击波碎石或手术。大多数患者都在接受肾病随访,两个人要么接受了肾移植,要么正在等待肾移植。这些患者的治疗与非单基因结石相似,不同的是,早期基因诊断可以帮助避免不必要的治疗,可以提供遗传咨询,一些单基因肾结石可能受益于靶向治疗。
    Kidney stones are becoming increasingly common, affecting up to 10% of adults. A small percentage are of monogenic origin, such as Dent\'s disease (DD). DD is a syndrome that causes low-molecular-weight proteinuria, hypercalciuria, nephrolithiasis, and nephrocalcinosis. It is X-linked, and most patients have mutations in the CLCN5 gene. We performed a review of the literature and evaluated the case series (n = 6) of a single center in Spain, reviewing the natural evolution of kidney stones, clinical implications, laboratory analyses, radiological development, and treatment. All patients had a genetically confirmed diagnosis, with the CLCN5 mutation being the most frequent (66%). All patients had proteinuria and albuminuria, while only two and three presented hypercalciuria and phosphate abnormalities, respectively. Only one patient did not develop lithiasis, with most (60%) requiring extracorporeal shock wave lithotripsy or surgery during follow-up. Most of the patients are under nephrological follow-up, and two have either received a renal transplant or are awaiting one. The management of these patients is similar to that with lithiasis of non-monogenic origin, with the difference that early genetic diagnosis can help avoid unnecessary treatments, genetic counseling can be provided, and some monogenic kidney stones may benefit from targeted treatments.
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  • 文章类型: Journal Article
    农药仍然是病虫害防治的基石,然而,它们的广泛和不合理的使用也助长了抵抗力的演变。这篇评论分析了从20世纪70年代到2023年的全球发表的实验数据,重点关注在选择性反应过程中表型和潜在的基因型变异是如何形成的。讨论从性别相关/母性抵抗的检查开始。有关母系遗传的观察丰富了我们对农药作用方式的认识,以联苯萘嗪为例。然而,抗性表型的主要控制归因于常染色体性状,观察到优势和单基因遗传的患病率很高,在田间菌株中也很明显。这一观察结果引起了人们对抗性管理策略的担忧,因为它们有可能加速抗性的传播。进一步探讨了优势水平与单基因遗传之间的相互作用,显性性状在多基因遗传中明显更为普遍。这一观察结果可能归因于代谢增强的积累。值得注意的是,进一步的分析表明,与其他选定的菌株相比,田间菌株单基因遗传的发生率更高,与既定的理论框架保持一致。总之,抗性的遗传结构因其在指导抗性管理策略和推进基础研究方面的关键作用而值得更多的研究关注。
    Pesticides remain a cornerstone in pest control, yet their extensive and irrational use also fuel the evolution of resistance. This review analyzes globally published experimental data spanning from the 1970s to 2023 to focus on how phenotypic and underlying genotypic variations are shaped during the selective response. The discussion commences with an examination of sex-linked/maternal resistance. Observations related to maternal inheritance have enriched our understanding of pesticide mode of action, notably exemplified by bifenazate. However, the predominant control of the resistant phenotype is attributed to autosomal traits, with a high prevalence of dominance and monogenic inheritance observed, also evident in field strains. This observation raises concerns regarding resistance management strategies due to their potential to accelerate the spread of resistance. The interplay between dominance levels and monogenic inheritance is further explored, with dominant traits being significantly more prevalent in polygenic inheritance. This observation may be attributed to the accumulation of enhanced metabolism. Notably, further analysis indicated that field strains exhibit a higher incidence of monogenic inheritance compared to other selected strains, aligning with established theoretical frameworks. In conclusion, the genetic architecture of resistance warrants increased research focus for its pivotal role in guiding resistance management strategies and advancing fundamental research.
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  • 文章类型: Journal Article
    当中风发生在儿科年龄时,它可能被错误地解释为非意外头部损伤(NAHI)。在这些情况下,多学科方法是基本的,包括全面的个人和家庭历史,以及准确的体检和额外的调查。尤其是当临床表现不确定时,重要的是要记住,某些遗传条件会导致大脑内部出血,这可能类似于NAHI。出生前后发生的小儿中风也可能是未诊断的遗传疾病的最初迹象。因此,进行彻底评估至关重要,包括基因检测,当怀疑NAHI但症状不清楚时。在这些情况下,经常观察到一组特征性的症状。本研究旨在总结儿童人群出血性中风的一些遗传原因,从而模仿非意外的头部受伤,考虑可以用于表征病理的元素。根据系统评价的首选报告项目(PRISMA)标准,对可能导致儿童ICH的遗传疾病进行了系统评价。我们选择了10篇关于中风的主要遗传疾病的文章;我们还选择了11篇关于小儿中风和遗传疾病的论文,或概述这些患者中风特征的研究。我们确定的疾病是烟雾病(MMD),COL4A1,COL4A2致病变异体,Ehlers-Danlos综合征(E-D),1型神经纤维瘤病(Nf1),镰状细胞病(SCD),脑海绵状畸形(CCM),遗传性出血性毛细血管扩张症(HHT)和马凡氏综合征。总之,本文全面概述了有NAHI嫌疑但图片不清楚时可在儿童中检测的遗传性疾病.
    When stroke occurs in pediatric age, it might be mistakenly interpreted as non-accidental head injury (NAHI). In these situations, a multidisciplinary approach is fundamental, including a thorough personal and familial history, along with accurate physical examination and additional investigations. Especially when the clinical picture is uncertain, it is important to remember that certain genetic conditions can cause bleeding inside the brain, which may resemble NAHI. Pediatric strokes occurring around the time of birth can also be an initial sign of undiagnosed genetic disorders. Hence, it is crucial to conduct a thorough evaluation, including genetic testing, when there is a suspicion of NAHI but the symptoms are unclear. In these cases, a characteristic set of symptoms is often observed. This study aims to summarize some of the genetic causes of hemorrhagic stroke in the pediatric population, thus mimicking non-accidental head injury, considering elements that can be useful in characterizing pathologies. A systematic review of genetic disorders that may cause ICH in children was carried out according to the Preferred Reporting Item for Systematic Review (PRISMA) standards. We selected 10 articles regarding the main genetic diseases in stroke; we additionally selected 11 papers concerning patients with pediatric stroke and genetic diseases, or studies outlining the characteristics of stroke in these patients. The disorders we identified were Moyamoya disease (MMD), COL4A1, COL4A2 pathogenic variant, Ehlers-Danlos syndrome (E-D), neurofibromatosis type 1 (Nf1), sickle cell disease (SCD), cerebral cavernous malformations (CCM), hereditary hemorrhagic telangiectasia (HHT) and Marfan syndrome. In conclusion, this paper provides a comprehensive overview of the genetic disorders that could be tested in children when there is a suspicion of NAHI but an unclear picture.
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  • 文章类型: Journal Article
    导致小儿肾病综合征(NS)的足细胞功能障碍的病因广泛,并随年龄而变化。许多新的遗传性足细胞病的发现和诊断技术的发展改变了对类固醇抗性NS的研究,同时促进了用机械方法替代传统的基于形态学的疾病分类。与原发性和继发性类固醇抗性NS相关的足细胞病变表现为弥漫性肾小球系膜硬化,微小变化疾病,局灶性节段肾小球硬化,和塌陷的肾小球病。分子检测,曾经是辅助选项,已成为临床研究的重要组成部分,当与肾脏活检结果配对时,提供了可以优化治疗和预后的数据。这篇综述侧重于原因,包括选定的单基因缺陷,临床表型,组织病理学发现,以及儿科人群中肾病综合征的年龄适当鉴别诊断,重点是足细胞病变。
    The etiologies of podocyte dysfunction that lead to pediatric nephrotic syndrome (NS) are vast and vary with age at presentation. The discovery of numerous novel genetic podocytopathies and the evolution of diagnostic technologies has transformed the investigation of steroid-resistant NS while simultaneously promoting the replacement of traditional morphology-based disease classifications with a mechanistic approach. Podocytopathies associated with primary and secondary steroid-resistant NS manifest as diffuse mesangial sclerosis, minimal change disease, focal segmental glomerulosclerosis, and collapsing glomerulopathy. Molecular testing, once an ancillary option, has become a vital component of the clinical investigation and when paired with kidney biopsy findings, provides data that can optimize treatment and prognosis. This review focuses on the causes including selected monogenic defects, clinical phenotypes, histopathologic findings, and age-appropriate differential diagnoses of nephrotic syndrome in the pediatric population with an emphasis on podocytopathies.
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  • 文章类型: Journal Article
    高血压是一种遗传性疾病,影响四分之一的人口,约占心血管死亡的50%。高血压的遗传基础是多方面的,涉及单基因和最常见的复杂多基因形式。随着人类基因组计划的到来,全基因组关联研究(GWAS)通过检测常见的遗传变异,发现了大量与高血压相关的基因位点.值得注意的是,然而,大多数这些遗传变异不会影响蛋白质编码序列,在确定导致高血压的实际基因方面存在相当大的障碍。尽管面临这些挑战,GWAS鉴定的基因座的精确定位正在成为揭示新基因和潜在的血压药理学管理靶标的有前景的策略。这篇综述提供了对高血压的单基因和多基因原因的见解。特别注意PRDM6,在最早的功能特征GWAS鉴定的基因中。此外,这篇综述探讨了导致肾脏和血管形式高血压的基因的作用,提供对其遗传和表观遗传作用机制的见解。
    Hypertension is a heritable disease that affects one-fourth of the population and accounts for about 50% of cardiovascular deaths. The genetic basis of hypertension is multifaceted, involving both monogenic and most commonly complex polygenic forms. With the advent of the human genome project, genome-wide association studies (GWAS) have identified a plethora of loci linked to hypertension by examining common genetic variations. It\'s notable, however, that the majority of these genetic variants do not affect the protein-coding sequences, posing a considerable obstacle in pinpointing the actual genes responsible for hypertension. Despite these challenges, precise mapping of GWAS-identified loci is emerging as a promising strategy to reveal novel genes and potential targets for the pharmacological management of blood pressure. This review provides insight into the monogenic and polygenic causes of hypertension. Special attention is given to PRDM6, among the earliest functionally characterized GWAS-identified genes. Moreover, this review delves into the roles of genes contributing to renal and vascular forms of hypertension, offering insights into their genetic and epigenetic mechanisms of action.
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