MitoChip

  • 文章类型: Journal Article
    ALS是一种异质性疾病,其中线粒体表型等不同因素与遗传易感性相结合。这项研究解决了同质(样品的总线粒体基因组受到影响)和/或异质突变(野生型和突变的线粒体DNA分子共存)是否可能在家族性ALS中起作用的问题。从家族性ALS患者中抽取血液,根据他们的家谱可能具有母体遗传模式,将其与没有母亲关联的ALS患者以及年龄匹配的对照组的血液进行比较。在两个队列中,我们使用重测序微阵列(AffymetrixMitoChipv2.0)分析了来自全血或分离的白细胞和血小板的线粒体基因组,该微阵列能够检测同质和异质线粒体DNA突变,并允许评估低水平的异质性.
    我们发现同质ND5突变增加,呼吸链复合体I的一个亚基,允许母体遗传的ALS患者的全血中。这种效果在球起病的患者中更为明显。在可能具有母体遗传的患者的血小板中,不同线粒体基因的异质突变显着增加。在母体ALS患者中没有发现低水平的异质体增加。
    我们的结果表明同质ND5突变对与延髓发病的母系相关ALS的贡献。因此,可以想象,特定的母体传播而不是随机获得的线粒体DNA突变可能有助于疾病过程.这与阿尔茨海默氏症和帕金森氏症的观察结果相反,这些疾病显示线粒体DNA中非特异性突变的年龄依赖性积累。
    ALS is a heterogeneous disease in which different factors such as mitochondrial phenotypes act in combination with a genetic predisposition. This study addresses the question of whether homoplasmic (total mitochondrial genome of a sample is affected) and/or heteroplasmic mutations (wildtype and mutant mitochondrial DNA molecules coexist) might play a role in familial ALS. Blood was drawn from familial ALS patients with a possible maternal pattern of inheritance according to their pedigrees, which was compared to blood of ALS patients without maternal association as well as age-matched controls. In two cohorts, we analyzed the mitochondrial genome from whole blood or isolated white blood cells and platelets using a resequencing microarray (Affymetrix MitoChip v2.0) that is able to detect homoplasmic and heteroplasmic mitochondrial DNA mutations and allows the assessment of low-level heteroplasmy.
    We identified an increase in homoplasmic ND5 mutations, a subunit of respiratory chain complex I, in whole blood of ALS patients that allowed maternal inheritance. This effect was more pronounced in patients with bulbar onset. Heteroplasmic mutations were significantly increased in different mitochondrial genes in platelets of patients with possible maternal inheritance. No increase of low-level heteroplasmy was found in maternal ALS patients.
    Our results indicate a contribution of homoplasmic ND5 mutations to maternally associated ALS with bulbar onset. Therefore, it might be conceivable that specific maternally transmitted rather than randomly acquired mitochondrial DNA mutations might contribute to the disease process. This stands in contrast with observations from Alzheimer\'s and Parkinson\'s diseases showing an age-dependent accumulation of unspecific mutations in mitochondrial DNA.
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  • 文章类型: Journal Article
    BACKGROUND: Mitochondrial DNA (mtDNA) mutations are considered as a possible primary cause of age-associated neurodegenerative disorders like Parkinson\'s disease (PD).
    OBJECTIVE: To analyze, along the whole mtDNA sequence of PD patients, the presence of non-reference alleles compared to reference alleles, as defined in the revised Cambridge Reference Sequence (rCRS).
    METHODS: mtDNA was extracted from whole blood of PD and control groups, and was sequenced using a chip-based resequencing system.
    RESULTS: 58 nucleotide positions (np) exhibited a different allelic distribution in the two groups; in 81% of them the non-reference alleles were over-represented in PD patients, similar to findings reported in patients with Alzheimer\'s disease, albeit in reduced proportion. Closer analysis of the 58 np in PD group showed that they were characterized by low-level heteroplasmy, and that the nucleotide substitutions determined an amino acid change in 84% of cases.
    CONCLUSIONS: These results suggest that mtDNA allelic changes are increased in PD and that age-related neurodegenerative diseases could share a common mechanism involving mtDNA.
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  • 文章类型: Journal Article
    众所周知,吸烟与血管内皮功能障碍有关,其病因和剂量依赖性方式主要与烟草烟雾(TS)中活性氧(ROS)的含量有关。尼古丁,和氧化应激(OS)驱动的炎症。临床前研究还表明,尼古丁(电子烟(电子烟)中使用的主要电子液体成分)也会导致OS,脑缺血加重和继发性脑损伤。同样,慢性电子烟电子烟可能是血管内皮功能障碍的前驱。在这里,我们提供了与TS相似的直接证据,e-Cig促进原代脑血管内皮细胞以及血管内皮细胞系bEnd3的线粒体去极化。此外,TS和e-Cig暴露都上调了跨膜铁输出体Slc40a1(对维持细胞铁和氧化还原稳态至关重要)和卟啉导入体Abcb6(与加速动脉粥样硬化有关)。然后,我们在体内研究了性别是否在慢性TS如何影响血管内皮功能中起作用。我们的结果清楚地表明,慢性TS暴露会差异影响II期酶以及先前在体外研究的铁转运蛋白的表达水平。尽管对TS的性别差异反应的生理意义尚不完全清楚,他们确实证明,在评估慢性吸烟和电子烟的潜在影响时,性别是一个需要调查的危险因素.
    It is well established that tobacco smoking is associated with vascular endothelial dysfunction in a causative and dose dependent manner primarily related to the tobacco smoke (TS) content of reactive oxygen species (ROS), nicotine, and oxidative stress (OS) -driven inflammation. Preclinical studies have also shown that nicotine (the principal e-liquid\'s ingredient used in e-cigarettes (e-Cigs) can also cause OS, exacerbation of cerebral ischemia and secondary brain injury. Likewise, chronic e-Cig vaping could be prodromal to vascular endothelial dysfunctions. Herein, we provide direct evidence that similarly to TS, e-Cig promotes mitochondrial depolarization in primary brain vascular endothelial cells as well as the vascular endothelial cell line bEnd3. In addition, both TS and e-Cig exposure upregulated the transmembrane iron exporter Slc40a1 (crucial to maintain cellular iron and redox homeostasis) and that of porphyrin importer Abcb6 (linked to accelerated atherosclerosis). We then investigated in vivo whether gender plays a role in how chronic TS affect vascular endothelial functions. Our results clearly show chronic TS exposure differentially impacts the expression levels of Phase-II enzymes as well as the iron transporters previously investigated in vitro. Although the physiological implications of the gender-specific differential responses to TS are not fully clear, they do demonstrate that gender is a risk factor that needs to be investigated when assessing the potential impact of chronic smoking and perhaps e-Cig vaping.
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  • 文章类型: Journal Article
    Sequence alterations of the mitochondrial DNA (mtDNA) have been identified in many tu-mor types. Their nature is not entirely clear. Somatic mutation or shifts of heteroplasmic mtDNA vari-ants may play a role. These sequence alterations exhibit a sufficient frequency in all tumor types investi-gated thus far to justify their use as a tumor marker. This statement is supported by the high copy num-ber of mtDNA, which facilitates the detection of aberrant tumor-derived DNA in bodily fluids. This will be of special interest in tumors, which release a relatively high number of cells into bodily fluids, which are easily accessible, most strikingly in urinary bladder carcinoma. Due to the wide distribution of the observed base substitutions, deletions or insertions within the mitochondrial genome, high efforts for whole mtDNA sequencing (16.5 kb) from bodily fluids would be required, if the method would be in-tended for initial tumor screening. However, the usage of mtDNA for sensitive surveillance of known tumor diseases is a meaningful option, which may allow an improved non-invasive follow-up for the urinary bladder carcinoma, as compared to the currently existing cytological or molecular methods. Fol-lowing a short general introduction into mtDNA, this review demonstrates that the scenario of a sensi-tive cancer follow-up by mtDNA-analysis deserves more attention. It would be most important to inves-tigate precisely in the most relevant tumor types, if sequencing approaches in combination with simple PCR-assays for deletions/insertions in homopolymeric tracts has sufficient sensitivity to find most tu-mor-derived mtDNAs in bodily fluids.
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  • 文章类型: Journal Article
    Alzheimer\'s disease (AD) is the most common form of dementia in the elderly. The vast majority of cases are not linked to a known genetic defect and the molecular mechanisms underlying AD pathogenesis are still elusive. Evidence suggests that mitochondrial dysfunction is a prominent feature of the disease, and that mitochondrial DNA (mtDNA) alterations may represent a possible starting point of the pathophysiological cascade. Although specific mtDNA alterations have been reported in AD patients both in brain and peripheral tissues, such as D-loop mutations, 4977-bp deletion and poly-C tract D310 cytosine insertion, a generalized subtle allelic shift has also been demonstrated. This shift is significant for a few nucleotide positions (nps), but it is also detectable for most nps, although at a lower level. As single allelic substitutions can unlikely be determinant, it is proposed that the combination of all of them could lead to a less efficient oxidative phosphorylation, thus influencing AD development and course.
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