Microbial inoculation

微生物接种
  • 文章类型: Journal Article
    这项研究检查了外源嗜热细菌和催熟剂对温室气体(GHG)排放的影响,酶活性,和堆肥过程中的微生物群落。单独使用催熟剂可使二氧化碳排放量减少30.9%,而催熟剂和嗜热细菌的使用导致N2O排放减少了50.8%。Pearson分析结果表明,有机质和硝态氮是影响温室气体排放的关键参数。CO2和CH4释放量与甲烷单加氧酶α亚基和N2O还原酶活性呈负相关(P<0.05)。此外,N2O排放与β-1,4-N-乙酰氨基葡萄糖苷酶呈正相关,氨单加氧酶活性(P<0.05)。Deinococcota,氯氟菌,拟杆菌与CO2和N2O排放密切相关。总的来说,添加嗜热细菌是减少堆肥过程中温室气体排放的有效策略。
    This research examined the impact of exogenous thermophilic bacteria and ripening agents on greenhouse gas (GHG) emission, enzyme activity, and microbial community during composting. The use of ripening agents alone resulted in a 30.9 % reduction in CO2 emissions, while the use of ripening agents and thermophilic bacteria resulted in a 50.8 % reduction in N2O emissions. Pearson\'s analysis showed that organic matter and nitrate nitrogen were the key parameters affecting GHG emissions. There was an inverse correlation between CO2 and CH4 releases and methane monooxygenase α subunit and N2O reductase activity (P<0.05). Additionally, N2O emissions were positively related to β-1, 4-N-acetylglucosaminidase, and ammonia monooxygenase activity (P<0.05). Deinococcota, Chloroflexi, and Bacteroidota are closely related to CO2 and N2O emissions. Overall, adding thermophilic bacteria represents an effective strategy to mitigate GHG emissions during composting.
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  • 文章类型: Journal Article
    越来越多地探索土壤微生物接种剂作为改善土壤条件以促进生态恢复的手段。在西澳大利亚西南部,高度生物多样性的Banksia林地植物群落越来越受到各种因素的威胁,包括气候变化,土地开发和采矿。Banksia林地的恢复对于保护该植物群落是必要的。尚未研究在Banksia林地恢复中使用微生物接种。这里,我们评估了一种商业微生物接种剂(GOGO果汁,NeutrogAustraliaPtyLtd)在盆栽实验中改善了10种生态多样化的Banksia林地植物的性能。对植物进行两种浇水方案之一(充分浇水和干旱)与微生物接种处理(未接种和接种)的组合。将植物在这两种浇水处理下保持10周,在这一点上,所有处理中的植物经受持续8周的最后干旱期。通过植物生物量和分配来评估植物性能,气体交换参数,叶面碳和氮以及稳定同位素(δ15N和δ13C)组成。分析了植物木质部汁液的植物激素,以研究微生物接种对植物激素谱的影响以及与其他观察到的生理参数的潜在关系。在所有被调查的植物物种中,接种处理对植物生长影响较小。对每个物种的进一步分析表明,接种处理在水分充足或干旱胁迫的条件下不会导致显著的生物量增加,对氮素营养和光合作用的影响是可变的和最小的。这表明所选择的商业微生物接种剂对所测试的植物物种具有有限的益处。进一步研究微生物(存在于接种剂中)与植物之间的相容性,接种时间,微生物的活力和达到有效性所需的浓度,在受控条件下,需要进行现场试验,以测试实际修复环境中的可行性和有效性。
    Soil microbial inoculants are increasingly being explored as means to improve soil conditions to facilitate ecological restoration. In southwestern Western Australia, highly biodiverse Banksia woodland plant communities are increasingly threatened by various factors including climate change, land development and mining. Banksia woodland restoration is necessary to conserve this plant community. The use of microbial inoculation in Banksia woodland restoration has not yet been investigated. Here, we evaluated the efficacy of a commercial microbial inoculant (GOGO Juice, Neutrog Australia Pty Ltd) for improving the performance of 10 ecologically diverse Banksia woodland plant species in a pot experiment. Plants were subjected to one of two watering regimes (well-watered and drought) in combination with microbial inoculation treatments (non-inoculated and inoculated). Plants were maintained under these two watering treatments for 10 weeks, at which point plants in all treatments were subjected to a final drought period lasting 8 weeks. Plant performance was evaluated by plant biomass and allocation, gas exchange parameters, foliar carbon and nitrogen and stable isotope (δ15N and δ13C) compositions. Plant xylem sap phytohormones were analysed to investigate the effect of microbial inoculation on plant phytohormone profiles and potential relationships with other observed physiological parameters. Across all investigated plant species, inoculation treatments had small effects on plant growth. Further analysis within each species revealed that inoculation treatments did not result in significant biomass gain under well-watered or drought-stressed conditions, and effects on nitrogen nutrition and photosynthesis were variable and minimal. This suggests that the selected commercial microbial inoculant had limited benefits for the tested plant species. Further investigations on the compatibility between the microorganisms (present in the inoculant) and plants, timing of inoculation, viability of the microorganisms and concentration(s) required to achieve effectiveness, under controlled conditions, and field trials are required to test the feasibility and efficacy in actual restoration environments.
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  • 文章类型: Journal Article
    微生物接种是减少土壤-作物系统中重金属(HM)供应的重要策略。然而,微生物接种对土壤中HMs的可用性及其在作物中的积累/转移的机制尚不清楚。这里,通过盆栽试验研究了接种苏云金芽孢杆菌对整个生育期土壤-小麦系统中Pb/Cd迁移和积累的抑制作用。结果表明,接种苏云金芽孢杆菌增加了土壤pH值和速效养分(包括碳,氮,和磷),并增强了营养获取酶的活性。显性分析表明,溶解性有机质(DOM)是影响HMs可利用性的关键因素,接种后DOM的有色光谱簇含量和腐殖化特性均有显著提高。有利于降低Pb/Cd的可利用性,尤其是在开花阶段,跌幅为12.8%。接种减少了Pb/Cd在芽中的积累以及从根到芽的转移,拔节期和苗期下降幅度最大(27.0-34.1%和6.9-11.8%),分别。在成熟阶段,接种降低了籽粒中Pb/Cd的积累(12.9-14.7%)和人类健康风险(4.1-13.2%)。Pearson相关分析结果表明,Pb/Cd的有效性与DOM的腐殖化程度呈正相关。最小二乘通径模型分析表明,苏云金芽孢杆菌通过调节DOM光谱特征,可以显著降低Pb/Cd在粮食中的积累和人体健康风险,不同生长阶段土壤中HMs的有效性和小麦中金属的积累/运输。本研究从全生命周期的角度揭示了苏云金芽孢杆菌对土壤-小麦系统中Pb/Cd迁移的抑制机制。为土壤的原位修复和田间粮食作物的安全生产提供了有价值的参考。
    Microbial inoculation is an important strategy to reduce the supply of heavy metals (HMs) in soil-crop systems. However, the mechanisms of microbial inoculation for the availability of HMs in soil and their accumulation/transfer in crops remain unclear. Here, the inhibitory effect of inoculation with Bacillus thuringiensis on the migration and accumulation of Pb/Cd in the soil-wheat system during the whole growth period was investigated by pot experiments. The results showed that inoculation with Bacillus thuringiensis increased soil pH and available nutrients (including carbon, nitrogen, and phosphorus), and enhanced the activities of nutrient-acquiring enzymes. Dominance analysis showed that dissolved organic matter (DOM) is the key factor affecting the availability of HMs. The content of colored spectral clusters and humification characteristics of DOM were significantly improved by inoculation, which is conducive to reducing the availability of Pb/Cd, especially during the flowering stage, the decrease was 12.8 %. Inoculation decreased Pb/Cd accumulation in the shoot and the transfer from root to shoot, with the greatest decreases at the jointing and seedling stages (27.0-34.1 % and 6.9-11.8 %), respectively. At the maturity stage, inoculation reduced the Pb/Cd accumulation in grain (12.9-14.7 %) and human health risk (4.1-13.2 %). The results of Pearson correlation analysis showed that the availability of Pb/Cd was positively correlated with the humification of DOM. Least square path model analysis showed that Bacillus thuringiensis could significantly reduce Pb/Cd accumulation in the grain and human health risks by regulating DOM spectral characteristics, the availability of HMs in soil and metals accumulation/transport in wheat at different growth stages. This study revealed the inhibition mechanism of Bacillus thuringiensis on migration of Pb/Cd in a soil-wheat system from a viewpoint of a full life cycle, which offers a valuable reference for the in-situ remediation of HM-contaminated soil and the safe production of food crops in field.
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  • 文章类型: Journal Article
    氨基酸是堆肥产品中必不可少的有机化合物。然而,堆肥过程中氨基酸代谢的潜在机制尚不清楚。本研究旨在探讨接种纤维素降解微生物对桑枝和蚕粪堆肥过程中氨基酸代谢的影响。纤维素降解微生物接种通过增加蛋白酶和蔗糖酶活性并刺激从初始阶段到嗜热阶段的8个氨基酸降解途径,使氨基酸降解增强了18%-43%,肠球菌,糖精孢子虫,棒状杆菌是优势细菌属,但通过增加蔗糖酶和脲酶活性刺激了54%的氨基酸生产,降低β-葡萄糖苷酶活性,在成熟期刺激22个氨基酸合成途径,与热裂,Devosia,和纤维素微生物是优势细菌属。结果表明,纤维素降解微生物接种增强了氨基酸从初始阶段到嗜热阶段的降解和成熟阶段的生物合成,从而提高有机肥的质量。
    Amino acids are essential organic compounds in composting products. However, the mechanism underlying the amino acid metabolism during composting remains unclear. This study aims at exploring the impacts of inoculating cellulose-degrading microbes on amino acid metabolism during composting with mulberry branches and silkworm excrements. Cellulose-degrading microbial inoculation enhanced amino acid degradation by 18%-43% by increasing protease and sucrase activities and stimulating eight amino acid degradation pathways from the initial to thermophilic phases, with Enterococcus, Saccharomonospora, Corynebacterium being the dominant bacterial genera, but stimulated amino acid production by 54% by increasing sucrase and urease activities, decreasing β-glucosidase activities, and stimulating twenty-two amino acid synthesis pathways at the mature phase, with Thermobifida, Devosia, and Cellulosimicrobium being the dominant bacterial genera. The results suggest that cellulose-degrading microbial inoculation enhances amino acid degradation from the initial to thermophilic phases and biosynthesis at the mature phase, thereby improving the quality of organic fertilizer.
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  • 文章类型: Journal Article
    了解自然条件下的大规模堆肥对于改善废物管理和促进可持续农业至关重要。在这项研究中,玉米秸秆(400吨)和猪粪(200吨)用微生物接种剂堆肥。堆肥的高温阶段持续了14周,产生碱性最终产品。具有低温启动和高温发酵的微生物系统在增强木质纤维素降解和腐殖质(HS)形成中起着至关重要的作用。添加微生物,包括罗丹菌,假单胞菌,和Planococcus,与纤维素的降解率呈正相关,半纤维素,和木质素。芽孢杆菌,Planococcus,不动杆菌与HS形成呈正相关。微生物促进木质纤维素的有效水解,提供腐殖质前体,通过酚蛋白和美拉德途径加速堆肥腐殖质化。这项研究为自然条件下的大规模堆肥提供了重要的见解,促进废物管理战略和促进可持续农业。
    Understanding large-scale composting under natural conditions is essential for improving waste management and promoting sustainable agriculture. In this study, corn straw (400 tons) and pig manure (200 tons) were composted with microbial inoculants. The thermophilic phase of composting lasted for fourteen weeks, resulting in an alkaline final product. Microbial systems with low-temperature initiation and high-temperature fermentation played a crucial role in enhancing lignocellulose degradation and humic substances (HS) formation. Adding microbes, including Rhodanobacter, Pseudomonas, and Planococcus, showed a positive correlation with degradation rates of cellulose, hemicellulose, and lignin. Bacillus, Planococcus, and Acinetobacter were positively correlated with HS formation. Microorganisms facilitated efficient hydrolysis of lignocelluloses, providing humic precursors to accelerate composting humification through phenolic protein and Maillard pathways. This study provides significant insights into large-scale composting under natural conditions, contributing to the advancement of waste management strategies and the promotion of sustainable agriculture.
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  • 文章类型: Journal Article
    各种研究已经解决了微生物接种剂对常驻微生物组组成的影响。在草食性胁迫下,微生物接种剂如何影响植物代谢并与常驻根瘤菌相互作用仍然难以捉摸。这里,我们调查了两种细菌和两种真菌接种剂的影响,作为单一物种和合成群落接种,在番茄植物(Solanumlycopersicum)的根际微生物组和挥发物上,比较了非胁迫条件与斜纹夜蛾暴露于叶片草食性的条件。基于扩增子测序分析,根瘤菌群落组成受到所有四种接种剂的显着影响,并且这种影响的大小取决于草食性胁迫。微生物接种剂改变了真菌群落的组成,但与草食性胁迫无关。根际挥发物受到微生物接种的影响,在草食胁迫下,处理之间的差异均匀。每种微生物接种剂都会引起应激植物挥发物的独特变化,但也有相似的反应。特别是提高了二甲基二硫醚和苯并噻唑的产量。总之,在番茄根际中引入微生物接种剂引起了根际微生物组和挥发物的独特和共同的变化,但是与草食性应激引起的微生物组变化相比,这些变化很小。
    Various studies have addressed the impact of microbial inoculants on the composition of the resident microbiome. How microbial inoculants impact plant metabolism and interact with the resident rhizobiota under herbivory stress remains elusive. Here, we investigated the impact of two bacterial and two fungal inoculants, inoculated as single species and as a synthetic community, on the rhizosphere microbiome and volatilome of tomato plants (Solanum lycopersicum) comparing nonstress conditions to exposed to leaf herbivory by Spodoptera exigua. Based on amplicon sequencing analysis, rhizobacterial community composition was significantly affected by all four inoculants and the magnitude of this effect was dependent on herbivory stress. Fungal community composition was altered by the microbial inoculants but independent of herbivory stress. The rhizosphere volatilome was impacted by the microbial inoculation and differences between treatments were evened under herbivory stress. Each microbial inoculant caused unique changes in the volatilome of stressed plants but also shared similar responses, in particular the enhanced production of dimethyl disulfide and benzothiazole. In conclusion, the introduction of microbial inoculants in the tomato rhizosphere caused unique as well as common changes in the rhizosphere microbiome and volatilome, but these changes were minor compared to the microbiome changes induced by herbivory stress.
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  • 文章类型: Journal Article
    本研究旨在阐明接种纤维素和半纤维素降解微生物对蚕粪和桑枝堆肥过程中一氧化二氮(N2O)排放的潜在影响机制。接种纤维素和半纤维素降解微生物导致总N2O排放量显着增加10.4±2.0%(349.1±6.2mgNkg-1dw)和26.7±2.1%(400.6±6.8mgNkg-1dw),分别,与对照组相比(316.3±3.6mgNkg-1dw)。N2O排放的刺激归因于氨氧化细菌(AOB)和反硝化细菌对N2O产生的贡献增强,AOBamoA和反硝化nirK基因丰度增加证明了这一点。此外,由于nosZⅠ和nosZⅠ基因的丰度增加,微生物接种刺激N2O还原为N2。这些发现强调了在堆肥过程中接种纤维素和半纤维素降解微生物时,必须制定具有成本效益和环境友好的策略来减少N2O排放。
    This study aims to clarify the mechanisms underlying effects of inoculating cellulose and hemicellulose-degrading microorganisms on nitrous oxide (N2O) emissions during composting with silkworm excrement and mulberry branches. Inoculation with cellulose and hemicellulose-degrading microorganisms resulted in significant increases of total N2O emission by 10.4 ± 2.0 % (349.1 ± 6.2 mg N kg-1 dw) and 26.7 ± 2.1 % (400.6 ± 6.8 mg N kg-1 dw), respectively, compared to the control (316.3 ± 3.6 mg N kg-1 dw). The stimulation of N2O emission was attributed to the enhanced contribution of ammonia-oxidizing bacteria (AOB) and denitrifying bacteria to N2O production, as evidenced by the increased AOB amoA and denitrifying nirK gene abundances. Moreover, microbial inoculation stimulated N2O reduction to N2 owing to increased abundances of nosZⅠ and nosZⅠⅠ genes. These findings highlight the necessity to develop cost-effective and environmentally friendly strategies to reduce N2O emissions when cellulose and hemicellulose-degrading microorganisms are inoculated during composting.
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  • 文章类型: Journal Article
    本研究旨在探讨共接种溶磷菌(PSB)和聚磷菌(PAB)对磷形态转化的影响。微生物生物量磷(MBP)和聚磷酸盐(Poly-P)的积累,堆肥中的细菌群落组成,使用高通量测序,PICRUSt2,网络分析,结构方程模型(SEM)和随机森林(RF)分析。结果表明,与仅PSB(T0)相比,PSB-PAB共接种(T1)降低了Olsen-P含量(1.4g),但具有更高水平的MBP(74.2mg/kg)和Poly-P(419A.U.)。壁炉架测试表明,细菌多样性与生物可利用性P和MBP之间呈显着正相关。通过网络分析确定了与Poly-P合成相关的关键属。SEM和RF分析表明,pH和细菌群落对Poly-P的合成影响最大,PICRUSt2分析显示,接种PAB增加了T1期的ppk基因丰度。因此,PSB-PAB联合接种为磷管理提供了新思路。
    This study aimed to explore the impact of co-inoculating phosphate-solubilizing bacteria (PSB) and phosphate accumulating bacteria (PAB) on phosphorus forms transformation, microbial biomass phosphorus (MBP) and polyphosphate (Poly-P) accumulation, bacterial community composition in composting, using high throughput sequencing, PICRUSt 2, network analysis, structural equation model (SEM) and random forest (RF) analysis. The results demonstrated PSB-PAB co-inoculation (T1) reduced Olsen-P content (1.4 g) but had higher levels of MBP (74.2 mg/kg) and Poly-P (419 A.U.) compared to PSB-only (T0). The mantel test revealed a significantly positive correlation between bacterial diversity and both bioavailable P and MBP. Halocella was identified as a key genus related to Poly-P synthesis by network analysis. SEM and RF analysis showed that pH and bacterial community had the most influence on Poly-P synthesis, and PICRUSt 2 analysis revealed inoculation of PAB increased ppk gene abundance in T1. Thus, PSB-PAB co-inoculation provides a new idea for phosphorus management.
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  • 文章类型: Journal Article
    由于城市绿地和集水区有限,研究人员正在探索垂直绿化系统(VGSs)在雨水管理中的能力,作为补充策略。虽然文献承认植被屋顶基底对雨水的重大影响,比较VGSs的有机和非有机底物的雨水管理能力仍未探索。因此,收集经验证据以提高VGSs的雨水管理能力至关重要。这里,我们报告了创新VGS的安装因素(底物类型和植物生长促进微生物(PGPM)接种)和环境因素(模拟雨水量和底物水分)对15个元素(N,P,Al,V,Cr,Fe,Mn,Co,Ni,Cu,Zn,As,Se,Cd,和Pb)在径流中。结果表明,底物类型是最有影响的因素:具有高有机质的芦苇基底物的浓度和总负荷明显高于砂壤土底物。基质类型与其他因素也有深刻的交互作用。例如,PGPM接种显着降低了As的总负荷,Cr,N,Ni,Se,无论基板类型,减少了Cd的总负荷,Co,Cu,Fe,Mn,和Pb仅在簧片基衬底中。此外,PGPM接种主要减少总负荷,但对浓度影响不大。基材类型也与模拟雨水量和基材水分相互作用:例如,在基于芦苇的基质中,较高的模拟雨水量降低了浓度,但增加了总负荷,而在各种模拟雨水量下,砂壤土基质的浓度和总负荷一直保持较低。较高的前期基质水分增加了大多数元素的浓度和总负荷。我们得出的结论是,可以通过底物选择来包含从VGSs中的浸出,保持基质水分,和有益的PGPM接种。
    Due to limited urban green spaces and catchments, researchers are exploring the capacity of vertical greenery systems (VGSs) in stormwater management as complementary strategies. While the literature acknowledges the significant impacts of vegetated roof substrates on stormwater, comparing the stormwater management capacities of organic and non-organic substrates for VGSs remains largely unexplored. It is thus essential to gather empirical evidence to enhance the stormwater management capacity of VGSs. Here, we report on the impact of installation factors (substrate type and plant growth-promoting microbe (PGPM) inoculation) and environmental factors (simulated rainwater quantity and substrate moisture) of an innovative VGS on the concentrations and total loads of 15 elements (N, P, Al, V, Cr, Fe, Mn, Co, Ni, Cu, Zn, As, Se, Cd, and Pb) in the runoff. Results showed that substrate type was the most influential factor: concentrations and total loads were significantly higher from a reed-based substrate with high organic matter than from a sandy loam substrate. Substrate type also had profound interactive effects with other factors. For instance, PGPM inoculation significantly reduced the total loads of As, Cr, N, Ni, and Se, regardless of substrate type, and reduced the total loads of Cd, Co, Cu, Fe, Mn, and Pb in the reed-based substrate only. In addition, PGPM inoculation primarily reduced total loads, yet had little effect on concentrations. Substrate type also interacted with simulated rainwater quantity and substrate moisture: for example, in the reed-based substrate, a higher simulated rainwater quantity reduced concentrations but increased total loads, while concentrations and total loads remained constantly low from the sandy loam substrate under various simulated rainwater quantities. High antecedent substrate moisture increased both concentrations and total loads for most of the elements. We conclude that leaching from VGSs can be contained via substrate selection, maintenance of substrate moisture, and beneficial PGPM inoculation.
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  • 文章类型: Journal Article
    在盐碱地管理农业磷(P)的挑战需要减少淋洗以保护环境,并保持土壤有效的磷水平以用于作物生产。这可以通过功能性微生物来实现,这些微生物可以促进P转化过程,如P同化,无机P增溶,和有机磷矿化。在这项研究中,我们建议综合利用聚磷菌(PAB)和溶磷菌(PSB),以达到在改善土壤有效磷水平的同时减轻磷淋溶的目的。这项研究进行了一项微观实验,该实验结合了土柱测试,土壤孵化,和盆栽试验,以评估细菌接种剂对土壤P淋溶的影响,土壤磷有效性,和植物P积累。结果表明,PAB的应用通过吸收不稳定的磷酸盐在土壤中减少了22.6%的溶解P淋溶。和17.3%的颗粒P通过促进土壤团聚淋溶。PSB和PAB的综合接种通过土壤有机磷的矿化协同提高了土壤有效磷含量18.3%,显著促进了小麦的生长和磷的积累。微生物群落分析表明,综合微生物处理降低了土壤细菌群落的多样性,增加了本地微生物的丰度,例如,溶菌酶和雷利杆菌,与土壤有效磷含量和碱性磷酸酶水平呈正相关。总之,基于耐盐PAB和PSB的综合微生物策略在盐碱地和农业活动中具有可持续的P管理的巨大潜力。
    The challenge of managing agricultural phosphorus (P) in saline regions entails both reducing leaching for environmental protection and maintaining soil available P levels for crop production, which could be achieved through functional microorganisms that can facilitate P transformation processes like P assimilation, inorganic P solubilization, and organic P mineralization. In this study, we proposed an integrated utilization of phosphorus-accumulating bacteria (PAB) and phosphorus-solubilizing bacteria (PSB) to reach the goal of alleviating P leaching while improving soil available P levels. The study conducted a microcosm experiment that combined a soil column test, soil incubation, and pot experiment to evaluate the effect of bacterial inoculants on soil P leaching, soil P availability, and plant P accumulation. The results showed that the application of PAB reduced 22.6 % of dissolved P leaching through the absorption of labile phosphate in the soil, and 17.3 % of particulate P leaching through the promoted soil aggregation. The integrated inoculation of PSB and PAB synergistically improved soil available P content by 18.3 % through the mineralization of soil organic P, and remarkably boosted wheat growth and its P accumulation. Microbial community analysis revealed that the integrated microbial treatment decreased the diversity of soil bacterial community and increased the abundance of native microbial species, i.g. Lysobacter and Ramlibacter, which were positively correlated with soil available P content and alkaline phosphatase level. In conclusion, the integrated microbial strategy based on halotolerant PAB and PSB has great potential for sustainable P management in saline areas and agricultural activities.
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