Mevalonate kinase

  • 文章类型: Journal Article
    古细菌甲羟戊酸途径是最近发现的真核甲羟戊酸途径的修饰形式。这个途径在古细菌中广泛保守,除了一些具有真核或其他修饰的甲羟戊酸途径的古细菌谱系。尽管这条途径似乎几乎是古细菌所独有的,该途径的整套同源基因存在于未培养细菌的宏基因组组装基因组序列中,长毛念珠菌,绿藻门。为了证明细菌领域中古细菌特异性途径的存在,我们证实了该途径特异性酶的活性,磷酸甲羟戊酸脱水酶和脱水甲羟戊酸磷酸脱羧酶,因为在具有不同类型的修饰的甲羟戊酸途径的密切相关的Chloroflexota细菌中,只有这两种酶不存在。通过在大肠杆菌细胞中重建的古细菌甲羟戊酸途径,通过类胡萝卜素生产来评估脱水甲羟戊酸磷酸脱羧酶的活性,而磷酸甲羟戊酸脱水酶在纯化和铁硫簇重建后通过使用重组酶的体外测定得到证实。一些甲羟戊酸途径相关酶的系统发育分析提示了念珠菌中甲羟戊酸途径的进化途径。这可能涉及水平基因转移事件。重要性最近在微生物中发现了各种修饰的甲羟戊酸途径,如古细菌和绿藻细菌,揭示了代谢途径进化的复杂性,包括那些参与初级代谢的。古细菌甲羟戊酸途径,几乎是古细菌领域独有的,存在于Chloroflexota细菌中,为甲羟戊酸途径和相关酶的分子进化提供了有价值的见解。在绿藻细菌的宏基因组组装基因组中也发现了可能参与古生甲羟戊酸途径的推定基因。此类基因可有助于代谢工程以生物生产有价值的类异戊二烯,因为已知古细菌甲羟戊酸途径是比其他甲羟戊酸途径消耗更少ATP的节能代谢途径。
    The archaeal mevalonate pathway is a recently discovered modified version of the eukaryotic mevalonate pathway. This pathway is widely conserved in archaea, except for some archaeal lineages possessing the eukaryotic or other modified mevalonate pathways. Although the pathway seems almost exclusive to the domain Archaea, the whole set of homologous genes of the pathway is found in the metagenome-assembled genome sequence of an uncultivated bacterium, Candidatus Promineifilum breve, of the phylum Chloroflexota. To prove the existence of the archaea-specific pathway in the domain Bacteria, we confirmed the activities of the enzymes specific to the pathway, phosphomevalonate dehydratase and anhydromevalonate phosphate decarboxylase, because only these two enzymes are absent in closely related Chloroflexota bacteria that possess a different type of modified mevalonate pathway. The activity of anhydromevalonate phosphate decarboxylase was evaluated by carotenoid production via the archaeal mevalonate pathway reconstituted in Escherichia coli cells, whereas that of phosphomevalonate dehydratase was confirmed by an in vitro assay using the recombinant enzyme after purification and iron-sulfur cluster reconstruction. Phylogenetic analyses of some mevalonate pathway-related enzymes suggest an evolutionary route for the archaeal mevalonate pathway in Candidatus P. breve, which probably involves horizontal gene transfer events.IMPORTANCEThe recent discovery of various modified mevalonate pathways in microorganisms, such as archaea and Chloroflexota bacteria, has shed light on the complexity of the evolution of metabolic pathways, including those involved in primary metabolism. The fact that the archaeal mevalonate pathway, which is almost exclusive to the domain Archaea, exists in a Chloroflexota bacterium provides valuable insights into the molecular evolution of the mevalonate pathways and associated enzymes. Putative genes probably involved in the archaeal mevalonate pathway have also been found in the metagenome-assembled genomes of Chloroflexota bacteria. Such genes can contribute to metabolic engineering for the bioproduction of valuable isoprenoids because the archaeal mevalonate pathway is known to be an energy-saving metabolic pathway that consumes less ATP than other mevalonate pathways do.
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  • 文章类型: Journal Article
    利什曼原虫的感染力取决于其侵入和逃避宿主的能力以及其在巨噬细胞内的繁荣能力。我们的研究揭示了利什曼原虫甲羟戊酸激酶(MVK)的作用,甲羟戊酸途径酶在内脏利什曼病发病机制中的作用。用野生型(WT)感染BALB/c小鼠的腹膜渗出细胞(PEC)来源的巨噬细胞,发现MVK过表达(MVKOE)和敲低(KD)寄生虫和MVKOE寄生虫比WT和MVKKD寄生虫更具感染性。巨噬细胞与MVKOE寄生虫的孵育降低了诱导型一氧化氮合酶(iNOS)的表达以及一氧化氮(NO)的产生,均为WT寄生虫的2倍。此外,Arginase1表达增加3倍,表明MVK可能诱导巨噬细胞向M2的极化,有利于巨噬细胞内寄生虫的存活。突变株感染巨噬细胞24小时后,不同细胞因子(TNF-α,测量IL-12、IL-10和IFN-γ)。MVKOE寄生虫感染巨噬细胞显示抗炎细胞因子:IL-10的水平增加,而MVKKD寄生虫感染显示促炎细胞因子:TNF-α的水平增加,IL-12和IFN-γ。因此,利什曼原虫甲羟戊酸激酶(LdMVK)调节巨噬细胞功能,在发病机理中具有重要作用。
    The infectivity of Leishmania is determined by its ability to invade and evade host and its thriving capacity within the macrophage. Our study revealed the role of Leishmania donovani mevalonate kinase (MVK), an enzyme of mevalonate pathway in visceral leishmaniasis pathogenesis. Peritoneal exudate cells (PEC)-derived macrophages from BALB/c mice were infected with wild type (WT), MVK over expressing (MVK OE) and knockdown (KD) parasites and MVK OE parasites were found to be more infective than WT and MVK KD parasites. Incubation of macrophages with MVK OE parasites declined inducible nitric oxide synthase (iNOS) expression as well as nitric oxide (NO) production, both by 2 times in comparison to WT parasites. Moreover, ∼3 fold increase in Arginase1 expression indicated that MVK might induce polarization of macrophage towards M2, favouring the survival of parasite within the macrophages. Post 24 h infection of the macrophages with mutant strains, the levels of different cytokines (TNF-α, IL-12, IL-10 and IFN-γ) were measured. Infection of macrophages with MVK OE parasites showed an increase in the level of anti-inflammatory cytokine: IL-10 while infection with MVK KD parasites exhibited an increase in the level of pro-inflammatory cytokines: TNF-α, IL-12, and IFN-γ. Hence, Leishmania donovani mevalonate kinase (LdMVK) modulates macrophage functions and has a significant role in pathogenesis.
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  • 文章类型: Case Reports
    高免疫球蛋白D综合征(HIDS)是一种罕见但严重的自身炎性疾病,如果不及早诊断和治疗,预后较差。这里,我们报告了3例HIDS患儿的典型临床表现和明确的基因诊断。患者1经历了反复的发烧发作,伴有黄斑丘疹性皮疹。患者2出现周期性发热,胆汁淤积,淋巴结病,口疮性口炎,关节痛,和腹痛,并接受了肠梗阻手术。患者3是患者2的兄弟姐妹,患有周期性发烧,并接受了肠套叠的外科手术。所有3例患者均给予白介素(IL)-6受体拮抗剂(托珠单抗)。结果显示,托珠单抗可有效减少炎性耀斑。早期诊断和托珠单抗治疗可有效改善HIDS患者的预后。
    Hyperimmunoglobulin D syndrome (HIDS) is a rare but severe autoinflammatory disease with a poor prognosis if not diagnosed and treated early. Here, we report three cases of HIDS in children with typical clinical manifestations and a clear genetic diagnosis. Patient 1 experienced recurrent fever flares with a maculo-papular skin rash. Patient 2 presented with periodic fever, cholestasis, lymphadenopathy, aphthous stomatitis, arthralgia, and abdominal pain and underwent surgery for intestinal obstruction. Patient 3, a sibling of patient 2, presented with periodic fever and underwent a surgical procedure for intussusception. All three patients were administered interleukin (IL)-6 receptor antagonist (tocilizumab). The results showed that tocilizumab effectively reduced inflammatory flares. Early diagnosis and tocilizumab treatment are effective at improving the prognosis of HIDS patients.
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  • 文章类型: Journal Article
    甲羟戊酸激酶是甲羟戊酸途径的关键调节因子,受下游代谢物焦磷酸法尼酯的反馈抑制。在这项研究中,我们验证了模拟焦磷酸法尼酯的单膦酸酯化合物可以抑制甲羟戊酸激酶的假设。探索最初合成的化合物作为法尼基焦磷酸合酶的变构抑制剂,我们发现了具有纳摩尔活性的甲羟戊酸激酶抑制剂。两种最有效的抑制剂的动力学表征表明Ki值为3.1和22nm。结构比较表明这些抑制剂的特征可能是其效力的原因。我们的发现介绍了人类甲羟戊酸激酶的第一类纳摩尔抑制剂,为未来的研究开辟了道路。这些化合物可能被证明可用作研究甲羟戊酸途径调节和评估甲羟戊酸激酶作为潜在治疗靶标的分子工具。
    Mevalonate kinase is a key regulator of the mevalonate pathway, subject to feedback inhibition by the downstream metabolite farnesyl pyrophosphate. In this study, we validated the hypothesis that monophosphonate compounds mimicking farnesyl pyrophosphate can inhibit mevalonate kinase. Exploring compounds originally synthesized as allosteric inhibitors of farnesyl pyrophosphate synthase, we discovered mevalonate kinase inhibitors with nanomolar activity. Kinetic characterization of the two most potent inhibitors demonstrated Ki values of 3.1 and 22 nm. Structural comparison suggested features of these inhibitors likely responsible for their potency. Our findings introduce the first class of nanomolar inhibitors of human mevalonate kinase, opening avenues for future research. These compounds might prove useful as molecular tools to study mevalonate pathway regulation and evaluate mevalonate kinase as a potential therapeutic target.
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  • 文章类型: Case Reports
    此病例突出了甚至超过婴儿期的晚发性高IgD综合征(HIDS)的可能性。临床医生评估反复发烧的儿童,皮疹,关节痛在鉴别诊断中应考虑HIDS,不管年龄。早期怀疑和基因检测可以导致及时诊断和阿纳金拉的靶向治疗,显著改善患者预后。
    高IgD综合征(HIDS)是一种罕见的常染色体隐性自身炎症性疾病,以反复发作的发热为特征,淋巴结病,关节痛,腹泻,腹痛,还有皮疹.在这个案例报告中,我们介绍了一个来自塔吉克斯坦的5岁女孩,甲羟戊酸激酶(MVK)基因突变,这与HIDS的诊断一致。描述了患者的临床症状,随着免疫学,血液学,和从风湿病诊所的评估中收集的生化结果。此外,全外显子组测序显示MVK基因第4外显子存在杂合错义变异.在这种情况下,HIDS的诊断发生在比通常观察到的年龄晚的年龄,强调即使在老年患者中也要考虑这种情况的重要性。本报告强调了MVK的广泛临床表型,以及医疗保健专业人员对其临床表现和管理的认识。
    UNASSIGNED: This case highlights the potential for later-onset Hyper-IgD syndrome (HIDS) even beyond infancy. Clinicians evaluating children with recurrent fever, skin rash, and arthralgia should consider HIDS in the differential diagnosis, regardless of age. Early suspicion and genetic testing can lead to a timely diagnosis and targeted therapy with Anakinra, significantly improving patient outcomes.
    UNASSIGNED: Hyper-IgD syndrome (HIDS) is a rare autosomal recessive autoinflammatory disorder characterized by recurrent episodes of fever, lymphadenopathy, arthralgia, diarrhea, abdominal pain, and skin rash. In this case report, we present a 5-year-old girl from Tajikistan with a mutation in the mevalonate kinase (MVK) gene, which is consistent with a diagnosis of HIDS. The clinical symptoms of the patient are described, along with immunological, hematological, and biochemical findings collected from the evaluation in the rheumatology clinic. Additionally, whole-exome sequencing revealed a heterozygous missense variation in exon 4 of the MVK gene. The diagnosis of HIDS in this case occurred at a later age than typically observed, emphasizing the importance of considering this condition even in older patients. This report highlights the broad clinical phenotype of MVK and the need for increased awareness among healthcare professionals regarding its clinical presentation and management.
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  • 文章类型: Journal Article
    背景:研究表明,表观遗传修饰涉及双伏蚕(Bombyxmori)滞育的调节,但目前尚不清楚表观遗传修饰如何响应环境信号,以精确调节双伏地B.mori的滞育过程。
    结果:在这项研究中,bidolutineB.mori的滞育终止卵,秋丰(QF)分为两组:QFHT组在25°C下以自然的昼夜循环孵育以产生滞育卵,和一个QFLT组在黑暗中在16.5°C下孵育以产生非滞育卵。在p阶段的第三天,提取卵的总RNA,并分析其N6-腺苷甲基化(m6A)丰度,以探讨m6A甲基化对家蚕滞育的影响。结果表明,1984年M6A峰是共有的,1563在QFLT和659在QFHT。在各种信号通路中,QFLT组的m6A甲基化水平均高于QFHT组。甲羟戊酸激酶(MK)在昆虫激素合成途径中的m6A甲基化率在两组间有显著差异。QFLTp中RNA干扰MK的敲除导致雌性在交配后产下滞育卵而不是非滞育卵。
    结论:m6A甲基化通过改变MK的表达水平而参与了双伏地B.mori的滞育调节。该结果提供了更清晰的环境信号对双伏蚕滞育调节的图像。
    BACKGROUND: Research has shown that epigenetic modification are involved the regulation of diapause in bivoltine silkworms (Bombyx mori), but it remains unclear how epigenetic modification in response to environmental signals precisely to regulate the diapause processing of bivoltine B. mori.
    RESULTS: In this study, the diapause terminated eggs of bivoltine B. mori, Qiufeng (QF) were divided into two groups: a QFHT group incubated at 25 °C with a natural day/night cycle to produce diapause eggs, and a QFLT group incubated at 16.5 °C in darkness to produce non-diapause eggs. On the 3rd day of the pupal stage, the total RNAs of the eggs were extracted and their N6-adenosine methylation (m6A) abundances were analyzed to explore the effects of m6A methylation on diapause in the silkworm. The results showed that 1984 m6A peaks are shared, 1563 in QFLT and 659 in QFHT. The m6A methylation level of the QFLT group was higher than that of the QFHT one in various signaling pathways. The m6A methylation rate of mevalonate kinase (MK) in the insect hormone synthesis pathway was significantly different between the two groups. The knockdown of MK by RNA interference in the pupae of QFLT resulted in females laying diapause eggs rather than non-diapause eggs after mating.
    CONCLUSIONS: m6A methylation involves in the diapause regulation of bivoltine B. mori by changing the expression levels of MK. This result provides a clearer image of the environmental signals on the regulation of diapause in bivoltine silkworms.
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  • 文章类型: Journal Article
    从工程微生物中生产萜类化合物通过提供基本药物对生物经济做出了显著贡献,可持续材料,可再生燃料。导致萜类化合物前体合成的甲羟戊酸途径已经广泛地用于工程。然而,单个途径酶对整体途径通量和最终萜类化合物产量的重要性鲜为人知,尤其是被认为是非限速的酶。为了研究甲羟戊酸途径中五种非限速酶的个体贡献,我们创建了243个酿酒酵母菌株的组合文库,每个都具有整合到基因组中的甲羟戊酸途径的额外拷贝,并从启动子的独特组合表达非限速酶。高通量筛选结合机器学习算法显示,甲羟戊酸激酶,Erg12p,作为影响产品滴度的关键酶。理想地,ERG12由中等强度的启动子表达,所述中等强度的启动子是导致高产物产率的“甜点”。此外,通过将甲羟戊酸途径靶向胞质溶胶和过氧化物酶体创建平台菌株.双重定位协同增加萜类化合物的产生,并暗示一些甲羟戊酸途径中间体,如甲羟戊酸,焦磷酸异戊酯(IPP),和二甲基烯丙基焦磷酸(DMAPP),可通过过氧化物酶体膜扩散。平台应变导致94倍,60倍,单萜香叶醇的效价提高了35倍,倍半萜α-腐殖烯,和三萜角鲨烯,分别。类萜平台菌株将用作生产任何类萜和萜烯衍生物的底盘。
    The production of terpenoids from engineered microbes contributes markedly to the bioeconomy by providing essential medicines, sustainable materials, and renewable fuels. The mevalonate pathway leading to the synthesis of terpenoid precursors has been extensively targeted for engineering. Nevertheless, the importance of individual pathway enzymes to the overall pathway flux and final terpenoid yield is less known, especially enzymes that are thought to be non-rate-limiting. To investigate the individual contribution of the five non-rate-limiting enzymes in the mevalonate pathway, we created a combinatorial library of 243 Saccharomyces cerevisiae strains, each having an extra copy of the mevalonate pathway integrated into the genome and expressing the non-rate-limiting enzymes from a unique combination of promoters. High-throughput screening combined with machine learning algorithms revealed that the mevalonate kinase, Erg12p, stands out as the critical enzyme that influences product titer. ERG12 is ideally expressed from a medium-strength promoter which is the \'sweet spot\' resulting in high product yield. Additionally, a platform strain was created by targeting the mevalonate pathway to both the cytosol and peroxisomes. The dual localization synergistically increased terpenoid production and implied that some mevalonate pathway intermediates, such as mevalonate, isopentyl pyrophosphate (IPP), and dimethylallyl pyrophosphate (DMAPP), are diffusible across peroxisome membranes. The platform strain resulted in 94-fold, 60-fold, and 35-fold improved titer of monoterpene geraniol, sesquiterpene α-humulene, and triterpene squalene, respectively. The terpenoid platform strain will serve as a chassis for producing any terpenoids and terpene derivatives.
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  • 目的:甲羟戊酸激酶缺乏症(MKD)是一种常染色体隐性自身炎性疾病,其特征是反复发生的全身性炎症。尽管与炎症有关联,血栓在MKD中很少见或报道不足。我们的目标是报告不受控制的炎症作为缺血性卒中的原因的证据。
    方法:病例报告。
    结果:一名39岁的法裔加拿大患者因中风咨询。他报告了先前诊断为家族性地中海热,尽管有秋水仙碱预防,但自出生以来几乎每月都因复发性炎症发作而住院。攻击是由感染或压力引发的,持续了3-7天,包括高达41°C的发烧,疼痛的淋巴结病,腹痛,多关节痛和斑丘疹。中风导致了他最近的炎症发作。脑部MRI证实为急性梗塞,无慢性缺血性损伤。血液检查显示C反应蛋白升高,淀粉样蛋白A和免疫球蛋白D血栓前和自身抗体测试,头颈CT血管造影,超声心动图,心脏监测,和有毒的屏幕是不显著的。排除感染。他唯一的妹妹也有类似的攻击。在这两种情况下,32个自身炎症相关基因的测序确定了两个致病性甲羟戊酸激酶突变。他们的非血亲父母,同父异母的兄弟和四个孩子无症状。用抗白细胞介素-1β单克隆抗体治疗后,患者在超过4年内不再出现炎症发作或卒中.
    结论:这位MKD患者在发作期间经历了缺血性卒中,归因于不受控制的炎症。研究排除了其他卒中病因。1岁前开始并持续>3天的反复发热发作,胃肠道症状,疼痛的淋巴结病,斑丘疹,触发器,口疮性口炎,非地中海血统,秋水仙碱预防无效与MKD一致。抗白细胞介素-1治疗可预防复发性自身炎症发作。
    OBJECTIVE: Mevalonate kinase deficiency (MKD) is an autosomal recessive autoinflammatory disease characterized by recurrent systemic inflammation attacks. Despite interconnections with inflammation, thrombosis is rare or underreported in MKD. Our goal is to report evidence of uncontrolled inflammation as the cause of ischemic stroke.
    METHODS: Case report.
    RESULTS: A 39-year-old French-Canadian patient consulted for stroke. He reported a previous diagnosis of familial Mediterranean fever and hospitalizations nearly monthly since birth for recurrent inflammatory attacks despite colchicine prophylaxis. Attacks were triggered by infections or stress, lasted 3-7 days, and included fever up to 41°C, painful lymphadenopathies, abdominal pain, polyarthralgia and maculopapular rash. Stroke culminated his most recent inflammatory attack. Brain MRI confirmed an acute infarct, without chronic ischemic damage. Blood tests documented increased C-reactive protein, amyloid A and immunoglobulin-D. Prothrombotic and autoantibody tests, cervicocephalic CT-angiography, echocardiography, cardiac monitoring, and toxic screen were unremarkable. Infections were excluded. His only sister had similar attacks. In both cases, sequencing of 32 autoinflammatory-associated genes identified two pathogenic mevalonate kinase mutations. Their non-consanguineous parents, half-brother and four children were asymptomatic. Following treatment with anti-interleukin-1beta monoclonal antibodies, he no longer had inflammatory attacks or stroke in >4 years.
    CONCLUSIONS: This MKD patient experienced an ischemic stroke during an attack, attributed to uncontrolled inflammation. Investigations excluded other stroke etiologies. Recurrent febrile attacks starting before age 1 and lasting >3 days, gastrointestinal symptoms, painful lymphadenopathies, maculopapular rash, triggers, aphthous stomatitis, non-Mediterranean ancestry, and ineffectiveness of colchicine prophylaxis are consistent with MKD. Anti-interleukin-1 therapy prevents recurrent autoinflammatory attacks.
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  • 文章类型: Journal Article
    Porokeratosis is a keratinization disorder with unclear etiopathogenesis, varied clinical presentation and characteristic histopathology, and is usually unresponsive to current therapeutic options. Until now, it was considered to be a clonal disorder with immunity, ultra violet radiation and other factors playing important roles in etiopathogenesis. It is now known that abnormalities in the mevalonate pathway are responsible for this clonal keratinization abnormality. New variants of porokeratosis like eruptive bullous, pruriginous, lichen planus like, follicular variants and porokeratoma have been described. While the cornoid lamella is the classical histopathologic feature, dermoscopy and reflectance confocal microscopy make the diagnosis clearer. Development of malignancy in a few variants is a concern. Linear, disseminated superficial actinic and giant lesions are most prone to developing malignancies. Bowen\'s disease, squamous cell carcinoma, basal cell carcinoma and even melanoma have been reported in cases of long-standing porokeratosis. Newer modalities of therapy such as photodynamic therapy, ingenol mebutate and HMGCoA inhibitors may play a role in the future.
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  • 文章类型: Journal Article
    Leishmaniasis comprises of a wide variety of diseases, caused by protozoan parasite belonging to the genus Leishmania. Leishmania parasites undergo different types of stress during their lifetime and have developed strategies to overcome this damage. Identifying the mechanistic approach used by the parasite in dealing with the stress is of immense importance for unfolding the survival strategy adopted by the parasite. Mevalonate kinase (MVK) is an important regulatory factor in the mevalonate pathway in both bacteria and eukaryotes. In this study, we explored the role of Leishmania donovani mevalonate kinase (LdMVK) in parasite survival under stress condition. Hydrogen peroxide (H2O2) and menadione, the two known oxidants were used to carry out the experiments. The MVK expression was found to be up regulated ∼2.1 fold and ∼2.3 fold under oxidative stress condition and under the effect of anti-Leishmania drug, AmBisome respectively. The cell viability declined under the effect of MVK inhibitor viz: vanadyl sulfate (VS). The level of intracellular ROS was also found to be increased under the effect of MVK inhibitor. To confirm the findings, LdMVK over expression (LdMVK OE) and LdMVK knockdown (LdMVK KD) parasites were generated. The level of ergosterol, an important component of plasma membrane in L. donovani, was observed and found to be reduced by nearly 60 % in LdMVK KD parasite and increased by nearly 30 % in LdMVK OE parasites as compared to wild type. However, the ergosterol content was found to be elevated under oxidative stress. Furthermore, LdMVK was also found to be associated with maintaining the plasma membrane integrity and also in preventing the peroxidation of cellular lipids when exposed to oxidative stress. The above data clearly suggests that MVK has a vital role in protecting the parasite from oxidative stress. These findings may also explore the contribution of LdMVK in drug unresponsiveness which may help in future rational drug designing for leishmaniasis.
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