MeSH headings

MeSH 标题
  • 文章类型: Journal Article
    超过7000种罕见疾病影响了4亿人,对医学研究和医疗保健构成重大挑战。精准医学与人工智能的整合提供了有希望的解决方案。这项工作介绍了一种分类器,用于识别研究和新闻文章是否与罕见或非罕见疾病有关。我们的方法涉及从Mondo和MeSH中提取709种罕见疾病MeSH术语,以改善罕见疾病分类。我们根据PubMed/MEDLINE的摘要和专家注释的新闻数据集评估我们的分类器,其中包括有关总共16项分析中选定的四种罕见神经发育障碍(NDD)的新闻文章,NDD被认为是最大的罕见疾病类别。我们在摘要中获得了85%的F1得分,在新闻文章中获得了71%的F1得分,展示跨两个数据集的鲁棒性,并强调整合人工智能和本体以改善疾病分类的潜力。虽然结果很有希望,它们还表明,在管理数据异构性方面需要进一步完善。我们的分类器改进了医学信息的识别和分类,对推进研究至关重要,加强信息获取,影响政策,支持个性化治疗。未来的工作将集中在扩大疾病分类,以区分传染病和遗传性疾病等属性,解决数据异构性,并整合了多语言功能。
    More than 7000 rare diseases affect over 400 million people, posing significant challenges for medical research and healthcare. The integration of precision medicine with artificial intelligence offers promising solutions. This work introduces a classifier developed to discern whether research and news articles pertain to rare or non-rare diseases. Our methodology involves extracting 709 rare disease MeSH terms from Mondo and MeSH to improve rare disease categorization. We evaluate our classifier on abstracts from PubMed/MEDLINE and an expert-annotated news dataset, which includes news articles on four selected rare neurodevelopmental disorders (NDDs)-considered the largest category of rare diseases-from a total of 16 analyzed. We achieved F1 scores of 85% for abstracts and 71% for news articles, demonstrating robustness across both datasets and highlighting the potential of integrating artificial intelligence and ontologies to improve disease classification. Although the results are promising, they also indicate the need for further refinement in managing data heterogeneity. Our classifier improves the identification and categorization of medical information, essential for advancing research, enhancing information access, influencing policy, and supporting personalized treatments. Future work will focus on expanding disease classification to distinguish between attributes such as infectious and hereditary diseases, addressing data heterogeneity, and incorporating multilingual capabilities.
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  • 文章类型: Journal Article
    间质性肺病是抗中性粒细胞胞浆抗体相关血管炎(AAV)的常见并发症。由于髓过氧化物酶在肺中的致病作用,在显微镜下多血管炎中最常见。氧化应激,中性粒细胞弹性蛋白酶释放,中性粒细胞胞外诱捕器表达的炎性蛋白导致成纤维细胞增殖和分化,从而导致纤维化。通常,间质性肺炎的纤维化模式是常见的,并与生存不良相关。AAV和间质性肺病患者的治疗缺乏证据,血管炎患者接受免疫抑制治疗,而那些进行性纤维化患者可能会从抗纤维化治疗中获益。
    Interstitial lung disease is a common complication of anti-neutrophil cytoplasmic antibody-associated vasculitis (AAV). It is seen most commonly in microscopic polyangiitis owing to the pathogenic effect of myeloperoxidase in the lung. Oxidative stress, neutrophil elastase release, and expression of inflammatory proteins by neutrophil extracellular traps result in fibroblast proliferation and differentiation and therefore fibrosis. Usually, interstitial pneumonia pattern fibrosis is common and associated with poor survival. Treatment for patients with AAV and interstitial lung disease lacks evidence, and those with vasculitis are treated with immunosuppression, whereas those with progressive fibrosis may well benefit from antifibrotic therapy.
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  • 文章类型: Journal Article
    适应性专业知识代表了两种有效解决问题的结合,以解决已知解决方案的临床问题。以及面对新挑战时的学习和创新能力。培养适应性专业知识需要谨慎的教学设计方法来强调更深层次,更努力的学习。这些教学策略是耗时的,努力,在卫生专业教育课程中实施具有挑战性。作者是教育工作者,他们的任务包括医学教育连续体,从本科到组织学习。每个人都在努力如何在自己的背景下促进适应性专业知识的发展。他们描述了从这些不同学习者水平的教育经验中得出的主题,以说明可用于培养适应性专业知识的策略。在范德比尔特大学医学院,医学院课程的重组提供了多种机会,可以使用特定的课程策略来促进适应性专业知识的发展。学生在未来学习方面的优势必须针对更短期的评估进行合理化。在一个紧急医学住院医师计划联盟中,在复杂的临床学习环境中,采用了多种教学方法来培养适应性专业知识.在这里,适应性专业知识方法的价值必须与临床护理中的效率要求相平衡。在梅奥诊所,现有的持续专业发展计划被用来将整个组织定向到适应性的专业知识心态,每个人都为转变做出贡献。不同的上下文说明了适应性专业知识概念化的灵活性,以及需要根据学习者的发展阶段定制教育方法。特别是,适应专业知识教学的一个重要好处是有机会影响个人职业身份的形成,以确保临床医生对未来的价值更深,在他们的职业生涯中更努力的学习策略。
    Adaptive expertise represents the combination of both efficient problem-solving for clinical encounters with known solutions, as well as the ability to learn and innovate when faced with a novel challenge. Fostering adaptive expertise requires careful approaches to instructional design to emphasize deeper, more effortful learning. These teaching strategies are time-intensive, effortful, and challenging to implement in health professions education curricula. The authors are educators whose missions encompass the medical education continuum, from undergraduate through to organizational learning. Each has grappled with how to promote adaptive expertise development in their context. They describe themes drawn from educational experiences at these various learner levels to illustrate strategies that may be used to cultivate adaptive expertise.At Vanderbilt University School of Medicine, a restructuring of the medical school curriculum provided multiple opportunities to use specific curricular strategies to foster adaptive expertise development. The advantage for students in terms of future learning had to be rationalized against assessments that are more short-term in nature. In a consortium of emergency medicine residency programs, a diversity of instructional approaches was deployed to foster adaptive expertise within complex clinical learning environments. Here the value of adaptive expertise approaches must be balanced with the efficiency imperative in clinical care. At Mayo Clinic, an existing continuous professional development program was used to orient the entire organization towards an adaptive expertise mindset, with each individual making a contribution to the shift.The different contexts illustrate both the flexibility of the adaptive expertise conceptualization and the need to customize the educational approach to the developmental stage of the learner. In particular, an important benefit of teaching to adaptive expertise is the opportunity to influence individual professional identity formation to ensure that clinicians of the future value deeper, more effortful learning strategies throughout their careers.
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  • 文章类型: Journal Article
    背景:初级保健在社区对冠状病毒病-19(COVID-19)大流行的反应中发挥了核心作用。提倡使用国家预警评分2(NEWS2)作为指导社区升级决策的工具。在这种情况下应用的该工具的性能尚不清楚。
    目的:在旨在评估社区疑似COVID-19患者的初级保健评估中心(PCAC)内,评估将护理升级到医院的过程。
    方法:对2020年3月30日至4月22日在SandwellWest伯明翰CCG的COVID-19初级保健评估中心评估的所有成年患者进行回顾性服务评估。
    方法:患者人口统计数据库,构建了医疗保健互动和生理观察。回顾性计算NEWS2和CRB65评分。在评估期间,确定升级的患者比例在NHSE指南定义的风险组内。
    结果:共确认150例患者。评估后,13.3%(n=20)的患者被认为需要升级。NEWS2大于或等于3的患者比例为46.9%(95%CI30.8-63.6%)。在绿色组中,使用NHSE定义的风险阈值升级到二级保健的患者比例为0%,琥珀色组22%(n=4),红色组81.3%(n=13)。
    结论:将护理升级到医院的临床决定没有遵循为COVID-19爆发编写的初步指导,但被证明是安全的。
    在大多数情况下,冠状病毒病-19(COVID-19)是一种可以自行消退的轻度疾病。一些患者发展为需要住院治疗的严重疾病。确定哪些患者可能需要住院治疗是一个挑战。许多全科医生已经开发了专门的服务,旨在评估疑似COVID-19的患者,并确定是否需要住院治疗。我们在伯明翰评估了提供此功能的服务。我们检查了服务范围内评估的150名患者的护理途径,以确定与医院评估需求相关的因素。我们发现,旨在帮助这一过程的国家决策工具对实践中发生的事情描述不佳。
    BACKGROUND: Primary care has played a central role in the community response to the coronavirus disease-19 (COVID-19) pandemic. The use of the National Early Warning Score 2 (NEWS2) has been advocated as a tool to guide escalation decisions in the community. The performance of this tool applied in this context is unclear.
    OBJECTIVE: To evaluate the process of escalation of care to the hospital within a primary care assessment centre (PCAC) designed to assess patients with suspected COVID-19 in the community.
    METHODS: A retrospective service evaluation of all adult patients assessed between 30 March and 22 April 2020 within a COVID-19 primary care assessment centre within Sandwell West Birmingham CCG.
    METHODS: A database of patient demographics, healthcare interactions and physiological observations was constructed. NEWS2 and CRB65 scores were calculated retrospectively. The proportion of patients escalated was within risk groups defined by NHSE guidelines in place during the evaluation period was determined.
    RESULTS: A total of 150 patients were identified. Following assessment 13.3% (n = 20) patients were deemed to require escalation. The proportion of patients escalated with a NEWS2 greater than or equal to 3 was 46.9% (95% CI 30.8-63.6%). The proportion of patients escalated to secondary care using NHSE defined risk thresholds was 0% in the green group, 22% (n = 4) in the amber group, and 81.3% (n = 13) in the red group.
    CONCLUSIONS: Clinical decisions to escalate care to the hospital did not follow initial guidance written for the COVID-19 outbreak but were demonstrated to be safe.
    In most cases, coronavirus disease-19 (COVID-19) is a mild illness that resolves on its own. Some patients develop severe disease requiring hospital treatment. Identifying which patients are likely to need hospital treatment is a challenge. Many GP practices have developed specific services designed to assess patients with suspected COVID-19 and establish whether hospital treatment is necessary. We evaluated a service providing this function in Birmingham. We examined the care pathway of 150 patients assessed within the service to established factors associated with the need for hospital assessment. We found a national decision tool designed to aid the process was a poor descriptor of what happened in practice.
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  • 文章类型: Journal Article
    In the age of big data, the amount of scientific information available online dwarfs the ability of current tools to support researchers in locating and securing access to the necessary materials. Well-structured open data and the smart systems that make the appropriate use of it are invaluable and can help health researchers and professionals to find the appropriate information by, e.g., configuring the monitoring of information or refining a specific query on a disease.
    We present an automated text classifier approach based on the MEDLINE/MeSH thesaurus, trained on the manual annotation of more than 26 million expert-annotated scientific abstracts. The classifier was developed tailor-fit to the public health and health research domain experts, in the light of their specific challenges and needs. We have applied the proposed methodology on three specific health domains: the Coronavirus, Mental Health and Diabetes, considering the pertinence of the first, and the known relations with the other two health topics.
    A classifier is trained on the MEDLINE dataset that can automatically annotate text, such as scientific articles, news articles or medical reports with relevant concepts from the MeSH thesaurus.
    The proposed text classifier shows promising results in the evaluation of health-related news. The application of the developed classifier enables the exploration of news and extraction of health-related insights, based on the MeSH thesaurus, through a similar workflow as in the usage of PubMed, with which most health researchers are familiar.
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  • 文章类型: Journal Article
    目的:确定医疗实体之间的新关系,比如毒品,疾病,和副作用,通常是资源密集型任务,涉及实验和临床试验。相关数据和精选知识的可用性增加,使这项任务的计算方法,特别是通过训练模型来预测可能的关系。这样的模型依赖于被研究的医疗实体的有意义的表示。我们提出了一种通用特征向量表示,它利用了医学术语的共同出现,与PubMed引文链接。
    方法:我们通过推断两种类型的关系来证明所提出的表述的有用性:一种药物引起副作用,一种药物治疗适应症。为了预测这些关系并评估其有效性,我们应用了两种建模方法:使用神经网络的多任务建模和基于梯度提升机和逻辑回归的单任务建模。
    结果:这些训练的模型,预测副作用或适应症,与使用单个直接共现特征的基线模型相比,获得了明显更好的结果。成果显示了综合表示的优势。
    结论:选择合适的表示形式对机器学习模型的预测性能具有巨大影响。我们提议的代表权很强大,因为它跨越多个医学领域,可用于预测广泛的关系类型。
    结论:各种医疗实体之间新关系的发现可以转化为有意义的见解,例如,与药物开发或疾病理解有关。我们对医疗实体的表示可以用来训练预测这种关系的模型,从而加速与医疗保健相关的发现。
    OBJECTIVE: Identifying new relations between medical entities, such as drugs, diseases, and side effects, is typically a resource-intensive task, involving experimentation and clinical trials. The increased availability of related data and curated knowledge enables a computational approach to this task, notably by training models to predict likely relations. Such models rely on meaningful representations of the medical entities being studied. We propose a generic features vector representation that leverages co-occurrences of medical terms, linked with PubMed citations.
    METHODS: We demonstrate the usefulness of the proposed representation by inferring two types of relations: a drug causes a side effect and a drug treats an indication. To predict these relations and assess their effectiveness, we applied 2 modeling approaches: multi-task modeling using neural networks and single-task modeling based on gradient boosting machines and logistic regression.
    RESULTS: These trained models, which predict either side effects or indications, obtained significantly better results than baseline models that use a single direct co-occurrence feature. The results demonstrate the advantage of a comprehensive representation.
    CONCLUSIONS: Selecting the appropriate representation has an immense impact on the predictive performance of machine learning models. Our proposed representation is powerful, as it spans multiple medical domains and can be used to predict a wide range of relation types.
    CONCLUSIONS: The discovery of new relations between various medical entities can be translated into meaningful insights, for example, related to drug development or disease understanding. Our representation of medical entities can be used to train models that predict such relations, thus accelerating healthcare-related discoveries.
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