Marburg virus

马尔堡病毒
  • 文章类型: Journal Article
    马尔堡病毒(MARV)是一种动物来源的高毒力病毒,是致死性感染(称为马尔堡病毒病[MVD])的原因,病死率为24%至90%。虽然潜在的非人畜共患病毒传播途径似乎是合理的,风险尚未完全确定。这里,我们描述了MARV在人群中传播的方式,主要关注性传播的潜力。此外,我们讨论了应采取的一些措施,以尽量减少病毒的性传播风险,并提出了关于性传播风险的未来研究议程。
    从这个角度来看,我们搜索了四个电子数据库(即,PubMed,Scopus,WebofScience,和GoogleScholar),并包括自1967年首次鉴定该病毒以来发表的最相关的研究。我们使用了“马尔堡病毒”,\"\"马尔堡病毒病,“”精液,\"\"性传播病毒,\"\"性传播,\"和\"新发传染病\"作为关键字。
    MARV通过与受感染的动物(最重要的是蝙蝠)和最近被诊断出患有这种疾病或死于这种疾病的个体的直接和间接接触而传播给人类。以前曾怀疑通过性接触传播病毒(仅从男性到其性伴侣)。研究表明,该病毒在相对较长的时间内主要存在于生精小管内的睾丸支持细胞中,并通过精液释放(在某些报告中,感染发作后>200天),两者都可能威胁性健康。除了男人,从理论上讲,女性可以,虽然不太可能导致这种疾病的性传播。
    MVD,然而,很少,可以通过性爱,在这方面,男人似乎是主要的载体。建议采取预防对策和进行安全性行为,以降低人际传播的风险。
    UNASSIGNED: Marburg virus (MARV) is a highly virulent virus of animal origin and the cause of a lethal infection (known as Marburg virus disease [MVD]) with a case-fatality ratio ranging from 24% to 90%. While the potential nonzoonotic routes of virus spread are plausible, the risk is not yet fully determined. Here, we described the ways by which MARV spreads within the human population focusing mainly on the potential of sexual transmission. In addition, we addressed some measures that should be taken to minimize the risk of sexual spread of the virus and proposed a future research agenda on the risk of sexual transmission.
    UNASSIGNED: For this perspective, we searched four electronic databases (i.e., PubMed, Scopus, Web of Science, and Google Scholar) and included the most relevant studies published since the first identification of the virus in 1967. We used \"Marburg virus,\" \"Marburg virus disease,\" \"Seminal fluid,\" \"Sexually-transmitted virus,\" \"Sexual transmission,\" and \"Emerging infectious disease\" as keywords.
    UNASSIGNED: MARV is transmitted to humans via both direct and indirect contact with infected animals (most importantly bats) and individuals who have recently been diagnosed with or died of the disease. The virus transmission through sexual contact has been previously suspected (exclusively from men to their sexual partners). Studies suggest that this virus persists predominantly in testicular Sertoli cells within seminiferous tubules over a relatively long period and is released through seminal fluid (in some reports >200 days post onset of infection) both could potentially threaten sexual health. In addition to men, women could theoretically, although less probably contribute to the sexual transmission of the disease.
    UNASSIGNED: MVD, however, rarely, could be passed through sex, and men appear to be the main carriers in this regard. Taking preventive countermeasures and practicing safe sex are recommended to reduce the risk of interhuman transmission.
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  • 文章类型: Journal Article
    丝状病毒产生具有特征性丝状形态的病毒颗粒。主要的病毒基质蛋白,VP40被运输到质膜并促进病毒颗粒形成和随后的病毒外出。在本研究中,我们评估了小GTP酶Rab11介导的内吞途径在马尔堡病毒(MARV)颗粒形成和出芽中的作用.尽管Rab11主要位于核周区域,它在瞬时表达MARVVP40的细胞的细胞质中表现出更弥散的分布。Rab11被掺入MARV样颗粒中。Rab11的显性阴性形式的表达和Rab11的敲低降低了细胞外周中VP40级分的量。此外,Rab11的下调适度减少了MARV样颗粒和真正的MARV的释放。我们进一步证明,VP40诱导微管网络向细胞外周的分布,部分与Rab11有关。微管的解聚减少了VP40在细胞周围的积累以及病毒颗粒的形成。VP40与α-微管蛋白物理相互作用,微管的主要组成部分,但不是Rab11。一起来看,这些结果表明,VP40部分与微管相互作用,并促进它们向细胞周围的分布,导致暂时束缚Rab11阳性囊泡向细胞表面的运输。正如我们之前证明Rab11在埃博拉病毒颗粒形成中的作用,这里的结果表明,丝状病毒通常利用囊泡运输机制进行适当的病毒颗粒形成和随后的出口。这些途径可能是开发泛丝状病毒疗法的潜在靶标。IMPORTANCEFilovirus,包括马尔堡和埃博拉病毒,产生不同的丝状病毒颗粒。尽管众所周知,这些病毒的主要病毒基质蛋白,VP40被运输到细胞表面并促进病毒颗粒的产生,有关相关分子机制的细节仍不清楚.为了解决这个知识差距,我们研究了小GTP酶Rab11介导的内吞途径在这一过程中的作用.我们的发现表明,马尔堡病毒利用Rab11介导的囊泡运输途径以微管网络依赖的方式释放病毒样颗粒和真正的病毒体。先前的研究结果表明,Rab11也参与了埃博拉病毒颗粒的生产。一起来看,这些数据表明丝状病毒,总的来说,可能会劫持依赖微管的囊泡运输机器进行生产性复制。因此,该途径是泛丝状病毒疗法开发的潜在靶标。
    Filoviruses produce viral particles with characteristic filamentous morphology. The major viral matrix protein, VP40, is trafficked to the plasma membrane and promotes viral particle formation and subsequent viral egress. In the present study, we assessed the role of the small GTPase Rab11-mediated endocytic pathway in Marburg virus (MARV) particle formation and budding. Although Rab11 was predominantly localized in the perinuclear region, it exhibited a more diffuse distribution in the cytoplasm of cells transiently expressing MARV VP40. Rab11 was incorporated into MARV-like particles. Expression of the dominant-negative form of Rab11 and knockdown of Rab11 decreased the amount of VP40 fractions in the cell periphery. Moreover, downregulation of Rab11 moderately reduced the release of MARV-like particles and authentic MARV. We further demonstrated that VP40 induces the distribution of the microtubule network toward the cell periphery, which was partly associated with Rab11. Depolymerization of microtubules reduced the accumulation of VP40 in the cell periphery along with viral particle formation. VP40 physically interacted with α-tubulin, a major component of microtubules, but not with Rab11. Taken together, these results suggested that VP40 partly interacts with microtubules and facilitates their distribution toward the cell periphery, leading to the trafficking of transiently tethering Rab11-positive vesicles toward the cell surface. As we previously demonstrated the role of Rab11 in the formation of Ebola virus particles, the results here suggest that filoviruses in general exploit the vesicle-trafficking machinery for proper virus-particle formation and subsequent egress. These pathways may be a potential target for the development of pan-filovirus therapeutics.IMPORTANCEFiloviruses, including Marburg and Ebola viruses, produce distinct filamentous viral particles. Although it is well known that the major viral matrix protein of these viruses, VP40, is trafficked to the cell surface and promotes viral particle production, details regarding the associated molecular mechanisms remain unclear. To address this knowledge gap, we investigated the role of the small GTPase Rab11-mediated endocytic pathway in this process. Our findings revealed that Marburg virus exploits the Rab11-mediated vesicle-trafficking pathway for the release of virus-like particles and authentic virions in a microtubule network-dependent manner. Previous findings demonstrated that Rab11 is also involved in Ebola virus-particle production. Taken together, these data suggest that filoviruses, in general, may hijack the microtubule-dependent vesicle-trafficking machinery for productive replication. Therefore, this pathway presents as a potential target for the development of pan-filovirus therapeutics.
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  • 文章类型: Journal Article
    尽管下一代测序(NGS)在确定新出现的RNA病毒的基因组序列方面发挥了重要作用,从头序列测定通常缺乏对病毒基因组5'和3'末端的足够覆盖。由于RNA病毒的基因组末端含有病毒繁殖所必需的转录和基因组复制启动子,缺乏末端序列信息阻碍了研究新出现和重新出现病毒的复制和转录机制的努力。为了避免这种情况,我们开发了一种新的方法,称为ViBE-Seq(病毒BonaFide末端测序),用于使用具有高保真度的简单而强大的方案对丝状病毒基因组末端进行高分辨率测序。该技术允许以少至50ng的总RNA对病毒RNA基因组和mRNA的5'末端进行序列测定。使用埃博拉病毒和马尔堡病毒作为高致病性的原型,重新出现的病毒,我们表明,ViBE-Seq是一种可靠的技术,可以快速准确地对来源于病毒粒子的丝状病毒RNA进行5端测序,被感染的细胞,和从受感染动物获得的组织。我们还显示ViBE-Seq可用于确定不同的逆转录酶是否具有末端脱氧核苷酸转移酶活性。总的来说,ViBE-Seq将促进对新兴病毒的完整序列的访问。
    Although next-generation sequencing (NGS) has been instrumental in determining the genomic sequences of emerging RNA viruses, de novo sequence determination often lacks sufficient coverage of the 5\' and 3\' ends of the viral genomes. Since the genome ends of RNA viruses contain the transcription and genome replication promoters that are essential for viral propagation, a lack of terminal sequence information hinders the efforts to study the replication and transcription mechanisms of emerging and re-emerging viruses. To circumvent this, we have developed a novel method termed ViBE-Seq (Viral Bona Fide End Sequencing) for the high-resolution sequencing of filoviral genome ends using a simple yet robust protocol with high fidelity. This technique allows for sequence determination of the 5\' end of viral RNA genomes and mRNAs with as little as 50 ng of total RNA. Using the Ebola virus and Marburg virus as prototypes for highly pathogenic, re-emerging viruses, we show that ViBE-Seq is a reliable technique for rapid and accurate 5\' end sequencing of filovirus RNA sourced from virions, infected cells, and tissue obtained from infected animals. We also show that ViBE-Seq can be used to determine whether distinct reverse transcriptases have terminal deoxynucleotidyl transferase activity. Overall, ViBE-Seq will facilitate the access to complete sequences of emerging viruses.
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  • 文章类型: Journal Article
    马尔堡病毒(MARV)是一种高度传染性和毒性的病原体,属于丝状病毒科。MARV在人类和非人类灵长类动物中引起严重的出血热。由于其剧毒性质,预防性方法对其控制是有希望的。目前没有批准的针对MARV的药物或疫苗,管理主要包括支持性护理,以治疗症状和预防并发症。我们的目的是使用免疫信息学研究设计一种针对MARV的新型多表位疫苗(MEV)。在这项研究中,使用各种蛋白质(VP35、VP40和糖蛋白前体)并选择潜在的表位。CTL和HTL表位覆盖了79.44%和70.55%的全球人口,分别。设计的MEV构建体稳定并在大肠杆菌中表达(E.大肠杆菌)宿主。物理化学性质也是可接受的。MARVMEV候选物可以预测综合免疫反应,例如体液和细胞的免疫反应。此外,预测了与toll样受体3(TLR3)及其激动剂(β-防御素)的有效相互作用。需要使用进一步的体外和体内研究来验证这些结果。
    Marburg virus (MARV) is a highly contagious and virulent agent belonging to Filoviridae family. MARV causes severe hemorrhagic fever in humans and non-human primates. Owing to its highly virulent nature, preventive approaches are promising for its control. There is currently no approved drug or vaccine against MARV, and management mainly involves supportive care to treat symptoms and prevent complications. Our aim was to design a novel multi-epitope vaccine (MEV) against MARV using immunoinformatics studies. In this study, various proteins (VP35, VP40 and glycoprotein precursor) were used and potential epitopes were selected. CTL and HTL epitopes covered 79.44% and 70.55% of the global population, respectively. The designed MEV construct was stable and expressed in Escherichia coli (E. coli) host. The physicochemical properties were also acceptable. MARV MEV candidate could predict comprehensive immune responses such as those of humoral and cellular in silico. Additionally, efficient interaction to toll-like receptor 3 (TLR3) and its agonist (β-defensin) was predicted. There is a need for validation of these results using further in vitro and in vivo studies.
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  • 文章类型: Journal Article
    在非洲国家中丝状病毒爆发的频率越来越高,因此迫切需要开发有效的抗丝状病毒药物。在继续我们先前对单萜衍生物的抗丝状病毒活性的研究,通过改变杂环的类型和接头的长度,我们合成了一系列()-fenchol和(-)-异接种酚衍生物。具有N-烷基哌嗪循环的衍生物被证明是最有效的抗病毒化合物,对Lenti-EboV-GP感染和对Lenti-MarV-GP感染的半最大抑制浓度(IC50)为1.4-20μSCI,对Lenti-MarV-GP感染为11.3-47μSCI。作用机理实验表明,该化合物可能通过与表面糖蛋白(GP)结合而发挥其作用。已证明,与埃博拉病毒GP相比,合成的化合物与马尔堡病毒GP的结合效率较低。此外,结果表明,该化合物具有溶酶体性质。因此,抗病毒活性可能是由于双重作用。这项研究提供了新的抗病毒药物,值得进一步探索。
    The increasing frequency of filovirus outbreaks in African countries has led to a pressing need for the development of effective antifilovirus agents. In continuation of our previous research on the antifilovirus activity of monoterpenoid derivatives, we synthesized a series of (+)-fenchol and (-)-isopinocampheol derivatives by varying the type of heterocycle and linker length. Derivatives with an N-alkylpiperazine cycle proved to be the most potent antiviral compounds, with half-maximal inhibitory concentration (IC50) 1.4-20 μМ against Lenti-EboV-GP infection and 11.3-47 μМ against Lenti-MarV-GP infection. Mechanism-of-action experiments revealed that the compounds may exert their action by binding to surface glycoproteins (GPs). It was demonstrated that the binding of the synthesized compounds to the Marburg virus GP is less efficient as compared to the Ebola virus GP. Furthermore, it was shown that the compounds possess lysosomotropic properties. Thus, the antiviral activity may be due to dual effects. This study offers new antiviral agents that are worthy of further exploration.
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  • 文章类型: Journal Article
    马尔堡,RNA病毒(MRV),是导致出血热的原因,影响人类和非人类灵长类动物。世界卫生组织(世卫组织)美国国立卫生研究院(NIH)和疾病控制和预防中心(CDC)认为这是一种极其危险的病毒,因此归类为风险组4,A类优先病原体和“A”类生物恐怖主义剂,分别。尽管有这些令人担忧的担忧,到目前为止,还没有针对这种病毒的预防安排。事实上,用传统的分子免疫学方法构建免疫原性候选疫苗是耗时且非常昂贵的。考虑到这些担忧,在这里,我们使用计算机模拟方法设计了针对MRV的CD4+T细胞多表位。筛选和选择潜在表位的标准是,非诱变,抗原性,大型HLAs覆盖范围,无毒和高世界人口覆盖率。这种方法和研究可以精确地减少实验室疫苗开发实验计划的花费和宝贵的时间。在当前场景中,研究人员经常使用计算机模拟方法来加快他们基于疫苗的实验室研究。计算研究对于在体外和体内确认分析之前将大型表位数据集筛选为较小的表位数据集非常有价值。
    Marburg, a RNA virus (MRV), is responsible for causing hemorrhagic fever that affects humans and non-human primates. World Health Organization (WHO), National Institutes of Health (NIH) and Centre of Disease Control and Prevention (CDC) considered this as an extremely dangerous virus, thus categorised as risk group 4, category A priority pathogen and category \"A\" bioterrorism agent, respectively. Despite of all these alarming concerns, no prophylaxis arrangements are available against this virus till date. In fact, the construction of immunogenic vaccine candidates by traditional molecular immunology methods is time consuming and very expensive. Considering these concerns, herein, we have designed CD4 + T Cell multiepitopes against MRV using in silico approach. The pin-point criteria of the screening and selection of potential epitopes are, non-mutagenic, antigenic, large HLAs coverage, non-toxic and high world population coverage. This kind of methodology and investigations can precisely reduce the expenditure and valuable time for experimental planning in development of vaccines in laboratories. In current scenario, researchers are frequently using in silico approaches to speed up their vaccine-based lab studies. The computational studies are highly valuable for the screening of large epitope dataset into smaller one prior to in vitro and in vivo confirmatory analyses.
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  • 文章类型: Journal Article
    马尔堡病毒感染与人类病死率高达90%有关,但迄今为止,没有批准的疫苗或单克隆抗体(mAb)对策。这里,我们用属于马尔堡的丝状病毒糖蛋白(GP)抗原的多价组合免疫恒河猴,苏丹,和埃博拉病毒产生针对它们的单特异性和交叉反应性抗体反应。从产生最高滴度的马尔堡病毒GP特异性中和抗体的动物中,我们使用异源Ravn病毒GP探针对单个记忆B细胞进行分选,并克隆和表征了一组34mAb,属于28个独特谱系。通过重叠pepscan和结合竞争分析评估抗体特异性。揭示了大约三分之一的谱系映射到保守的受体结合区,包括通过阴性染色电子显微镜证实的针对该区域的有效中和谱系。其他谱系靶向GP2上的保护区,而其他谱系被发现具有交叉丝状病毒反应性。我们的研究促进了对正马尔伯病毒糖蛋白抗原性的理解,并进一步努力开发针对这些致命病毒的候选抗体对策。
    目的:马尔堡病毒是1967年在人类中首次出现的丝状病毒,可引起严重的出血热,平均病死率约为50%。尽管mAb对策已被批准用于临床治疗相关的埃博拉病毒,目前没有批准的针对马尔堡病毒的对策。我们成功地从用丝状病毒抗原的多价组合免疫的猕猴中分离出一组正马尔伯病毒GP特异性mAb。我们的分析显示,面板中大约一半的抗体映射到糖蛋白上的区域,以防止感染,包括宿主细胞受体结合结构域和膜锚定亚基上的保护区域。组中的其他抗体表现出广泛的丝状病毒GP识别。我们的研究描述了针对正马尔伯病毒和其他丝状病毒GP的多种交叉反应性猕猴抗体的发现,并为进一步的研究和开发提供了候选的免疫治疗剂。
    Marburg virus infection in humans is associated with case fatality rates that can reach up to 90%, but to date, there are no approved vaccines or monoclonal antibody (mAb) countermeasures. Here, we immunized Rhesus macaques with multivalent combinations of filovirus glycoprotein (GP) antigens belonging to Marburg, Sudan, and Ebola viruses to generate monospecific and cross-reactive antibody responses against them. From the animal that developed the highest titers of Marburg virus GP-specific neutralizing antibodies, we sorted single memory B cells using a heterologous Ravn virus GP probe and cloned and characterized a panel of 34 mAbs belonging to 28 unique lineages. Antibody specificities were assessed by overlapping pepscan and binding competition analyses, revealing that roughly a third of the lineages mapped to the conserved receptor binding region, including potent neutralizing lineages that were confirmed by negative stain electron microscopy to target this region. Additional lineages targeted a protective region on GP2, while others were found to possess cross-filovirus reactivity. Our study advances the understanding of orthomarburgvirus glycoprotein antigenicity and furthers efforts to develop candidate antibody countermeasures against these lethal viruses.
    OBJECTIVE: Marburg viruses were the first filoviruses characterized to emerge in humans in 1967 and cause severe hemorrhagic fever with average case fatality rates of ~50%. Although mAb countermeasures have been approved for clinical use against the related Ebola viruses, there are currently no approved countermeasures against Marburg viruses. We successfully isolated a panel of orthomarburgvirus GP-specific mAbs from a macaque immunized with a multivalent combination of filovirus antigens. Our analyses revealed that roughly half of the antibodies in the panel mapped to regions on the glycoprotein shown to protect from infection, including the host cell receptor binding domain and a protective region on the membrane-anchoring subunit. Other antibodies in the panel exhibited broad filovirus GP recognition. Our study describes the discovery of a diverse panel of cross-reactive macaque antibodies targeting orthomarburgvirus and other filovirus GPs and provides candidate immunotherapeutics for further study and development.
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  • 文章类型: Journal Article
    马尔堡病毒(MARV),埃博拉病毒的近亲,可以在高死亡率的人类中诱发出血热。近年来,由于在各个非洲国家中观察到的零星爆发,这种高度致命的病毒越来越受到关注。这种文献计量分析努力阐明趋势,动力学,以及描绘了有关MARV的研究景观的知识焦点。
    1968年至2023年有关MARV的相关文献是从WebofScienceCoreCollection数据库中提取的。在此之后,利用在线分析平台对数据进行了文献计量分析和可视化程序,CiteSpace6.2R6和VOSviewer1.6.20。三种不同类型的文献计量指标,包括定量指标,定性指标,结构指标被用来衡量研究人员的生产力,评估他们的工作质量,并分析出版关系,分别。
    MARV主要在非洲流行。迄今为止,文献中已经描述了大约643例确诊病例,在总体患者中观察到的死亡率为81.2%.共纳入1014篇论文,包括869篇文章和145篇评论。年度出版物显示出从1968年到2023年的增长模式(R2=0.8838)。美国站在这个学科的前沿,拥有大量的财政和人力资源来进行科学调查。然而,合著者分析显示,国际研究合作有待进一步加强。基于参考和关键词分析,当代MARV研究涵盖了关键领域:主要是,优先考虑创建预防性疫苗以阻止病毒传播,其次,探索有针对性的抗病毒策略,包括小分子抗病毒药物或MARV特异性单克隆抗体。此外,全面掌握病毒传播,转录,复制机制仍然是正在进行的调查的中心重点。未来的MARV研究预计将侧重于评估临床试验的安全性和有效性,开发抑制病毒传播的抑制剂,探索疫苗的免疫原性,病毒-宿主关联研究,并阐明中和抗体在MARV治疗中的作用。
    本研究提供了对MARV在过去几十年中的当代地位和轨迹的全面见解。这使研究人员能够辨别新颖的合作前景,机构伙伴关系,新兴主题,并研究该领域的前沿。
    UNASSIGNED: Marburg virus (MARV), a close relative of Ebola virus, could induce hemorrhagic fevers in humans with high mortality rate. In recent years, increasing attention has been paid to this highly lethal virus due to sporadic outbreaks observed in various African nations. This bibliometric analysis endeavors to elucidate the trends, dynamics, and focal points of knowledge that have delineated the landscape of research concerning MARV.
    UNASSIGNED: Relevant literature on MARV from 1968 to 2023 was extracted from the Web of Science Core Collection database. Following this, the data underwent bibliometric analysis and visualization procedures utilizing online analysis platform, CiteSpace 6.2R6, and VOSviewer 1.6.20. Three different types of bibliometric indicators including quantitative indicator, qualitative indicators, and structural indicators were used to gauge a researcher\'s productivity, assess the quality of their work, and analyze publication relationships, respectively.
    UNASSIGNED: MARV is mainly prevalent in Africa. And approximately 643 confirmed cases have been described in the literature to date, and mortality observed was 81.2 % in overall patients. A total of 1014 papers comprising 869 articles and 145 reviews were included. The annual publications showed an increasing growth pattern from 1968 to 2023 (R2 = 0.8838). The United States stands at the forefront of this discipline, having dedicated substantial financial and human resources to scientific inquiry. However, co-authorship analysis showed the international research collaboration needs to be further strengthened. Based on reference and keywords analysis, contemporary MARV research encompasses pivotal areas: primarily, prioritizing the creation of prophylactic vaccines to impede viral spread, and secondarily, exploring targeted antiviral strategies, including small-molecule antivirals or MARV-specific monoclonal antibodies. Additionally, a comprehensive grasp of viral transmission, transcription, and replication mechanisms remains a central focus in ongoing investigations. And future MARV studies are expected to focus on evaluating clinical trial safety and efficacy, developing inhibitors to contain viral spread, exploring vaccine immunogenicity, virus-host association studies, and elucidating the role of neutralizing antibodies in MARV treatment.
    UNASSIGNED: The present study offered comprehensive insights into the contemporary status and trajectories of MARV over the past decades. This enables researchers to discern novel collaborative prospects, institutional partnerships, emerging topics, and research forefronts within this domain.
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  • 文章类型: Journal Article
    蛋白质-蛋白质复合物的分子间相互作用在发现用于诊断和治疗许多疾病的新物质的过程中起着重要作用。在这些蛋白质的复合物中,我们不得不提到抗体;它们与丝状病毒科-埃博拉病毒和马尔堡病毒两个属的单链RNA病毒的特异性抗原相互作用;两者都在非洲引起罕见但致命的病毒性出血热,具有大流行潜力。在这项研究中,我们进行的研究旨在设计和评估针对丝状病毒糖蛋白前体GP-1,2的抗体,以开发泛丝状病毒易于使用的快速诊断试验的潜在靶标.使用天然抗体-抗原复合物的可用3D结构进行了计算机研究,以确定单个蛋白质片段在其形成和维持过程中的稳定性。计算出的复合物的自由结合能及其对所有氨基酸的分解使我们能够定义在结构中起重要作用的残基,并指出可以改善潜在抗体的位置。在此之后,该研究涉及用两种多克隆抗体(pABs)和14种单克隆抗体(mABs)靶向丝状病毒GP1,2的6个表位.使用酶免疫测定进行的评估测试了62种不同的夹心组合的单克隆抗体(mAb),鉴定成功捕获重组GP1,2(rGP)的10种组合。在这些组合中,夹心选项(3G2G12*-(rGP)-2D8F11)表现出最高的捕获rGP抗原的倾向。
    Intermolecular interactions of protein-protein complexes play a principal role in the process of discovering new substances used in the diagnosis and treatment of many diseases. Among such complexes of proteins, we have to mention antibodies; they interact with specific antigens of two genera of single-stranded RNA viruses belonging to the family Filoviridae-Ebolavirus and Marburgvirus; both cause rare but fatal viral hemorrhagic fever in Africa, with pandemic potential. In this research, we conduct studies aimed at the design and evaluation of antibodies targeting the filovirus glycoprotein precursor GP-1,2 to develop potential targets for the pan-filovirus easy-to-use rapid diagnostic tests. The in silico research using the available 3D structure of the natural antibody-antigen complex was carried out to determine the stability of individual protein segments in the process of its formation and maintenance. The computed free binding energy of the complex and its decomposition for all amino acids allowed us to define the residues that play an essential role in the structure and indicated the spots where potential antibodies can be improved. Following that, the study involved targeting six epitopes of the filovirus GP1,2 with two polyclonal antibodies (pABs) and 14 monoclonal antibodies (mABs). The evaluation conducted using Enzyme Immunoassays tested 62 different sandwich combinations of monoclonal antibodies (mAbs), identifying 10 combinations that successfully captured the recombinant GP1,2 (rGP). Among these combinations, the sandwich option (3G2G12* - (rGP) - 2D8F11) exhibited the highest propensity for capturing the rGP antigen.
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  • 文章类型: Journal Article
    与马尔堡病毒感染相关的高死亡率使其成为传染病中危害最大的疾病。使用计算机模拟方法的药物再利用在鉴定可能通过靶向病毒的主要蛋白来阻止病毒复制的潜在化合物方面是至关重要的。这项研究旨在重新利用SARS-CoV-2的药物,以鉴定针对马尔堡病毒基质蛋白VP40的潜在候选者。进行虚拟筛选,其中对照化合物,尼洛替尼,显示-9.99kcal/mol的结合评分。根据绑定分数,选择具有比对照更低的结合评分的命中化合物9549298、11960895、44545852、51039094和89670174。随后的分子动力学(MD)模拟揭示化合物9549298与残基Gln290一致地形成氢键。在分子对接和MD模拟姿势中都观察到了这一点,表明与蛋白质的强烈和显著的相互作用。11960895在100ns模拟中表现出最稳定和一致的RMSD模式,而9549298与对照分子相比具有最相同的RMSD图。MM/PBSA分析表明,9549298和11960895的结合自由能(ΔG)低于对照,-30.84和-38.86千卡/摩尔,分别。通过PCA(主成分分析)和FEL(自由能景观)分析观察到,化合物9549298和11960895具有较小的构象变化。总的来说,本研究提出9549298和11960895作为VP40MARV的潜在结合剂,可以引起其抑制,然而,它本身缺乏实验验证。此外,该研究提出了体外实验作为验证这些计算结果的下一步,提供了一种实用的方法来进一步探索这些化合物作为抗病毒药物的潜力。由RamaswamyH.Sarma沟通。
    The significant mortality rate associated with Marburg virus infection made it the greatest hazard among infectious diseases. Drug repurposing using in silico methods has been crucial in identifying potential compounds that could prevent viral replication by targeting the virus\'s primary proteins. This study aimed at repurposing the drugs of SARS-CoV-2 for identifying potential candidates against the matrix protein VP40 of the Marburg virus. Virtual screening was performed where the control compound, Nilotinib, showed a binding score of -9.99 kcal/mol. Based on binding scores, hit compounds 9549298, 11960895, 44545852, 51039094, and 89670174 were selected that had a lower binding score than the control. Subsequent molecular dynamics (MD) simulation revealed that compound 9549298 consistently formed a hydrogen bond with the residue Gln290. This was observed both in molecular docking and MD simulation poses, indicating a strong and significant interaction with the protein. 11960895 had the most stable and consistent RMSD pattern exhibited in 100 ns simulation, while 9549298 had the most identical RMSD plot compared to the control molecule. MM/PBSA analysis showed that the binding free energy (ΔG) of 9549298 and 11960895 was lower than the control, with -30.84 and -38.86 kcal/mol, respectively. It was observed by the PCA (principal component analysis) and FEL (free energy landscape) analysis that compounds 9549298 and 11960895 had lesser conformational variation. Overall, this study proposed 9549298 and 11960895 as potential binders of VP40 MARV that can cause its inhibition, however it inherently lacks experimental validation. Furthermore, the study proposes in-vitro experiments as the next step to validate these computational findings, offering a practical approach to further explore these compounds\' potential as antiviral agents.Communicated by Ramaswamy H. Sarma.
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