Major histocompatibility complex

主要组织相容性复合体
  • 文章类型: Journal Article
    表达在CD8+T细胞的表面,CD8共受体是有助于抗原识别的T细胞的关键组成部分,免疫细胞成熟,和免疫细胞信号。虽然CD8被广泛认为是常规CD8+αβT细胞的共刺激分子,最近的报道强调了它在适应性和先天免疫反应中的多方面作用.在这次审查中,我们讨论了CD8与其免疫调节特性有关的效用。我们概述了不同CD8结构域的独特结构和功能(胞外域,铰链,跨膜,细胞质尾)在CD8αα同二聚体和CD8αβ异二聚体的不同特性的背景下。我们讨论了通常用于构建用于免疫治疗的嵌合抗原受体的CD8特征。我们描述了CD8与经典MHC-I的分子相互作用,非经典MHCs,和参与T细胞信号传导的Lck伙伴。讨论了改变免疫应答的工程化和天然存在的CD8突变。综述了靶向CD8的抗CD8单克隆抗体(mAB)的应用。最后,我们研究了几种CD8/mAB复合物的独特结构和功能。总的来说,这些发现揭示了CD8和CD8结合伴侣的免疫调节特性,不仅揭示了免疫系统的基本功能,而是推进靶向免疫治疗的转化研究。
    Expressed on the surface of CD8+ T cells, the CD8 co-receptor is a key component of the T cells that contributes to antigen recognition, immune cell maturation, and immune cell signaling. While CD8 is widely recognized as a co-stimulatory molecule for conventional CD8+ αβ T cells, recent reports highlight its multifaceted role in both adaptive and innate immune responses. In this review, we discuss the utility of CD8 in relation to its immunomodulatory properties. We outline the unique structure and function of different CD8 domains (ectodomain, hinge, transmembrane, cytoplasmic tail) in the context of the distinct properties of CD8αα homodimers and CD8αβ heterodimers. We discuss CD8 features commonly used to construct chimeric antigen receptors for immunotherapy. We describe the molecular interactions of CD8 with classical MHC-I, non-classical MHCs, and Lck partners involved in T cell signaling. Engineered and naturally occurring CD8 mutations that alter immune responses are discussed. The applications of anti-CD8 monoclonal antibodies (mABs) that target CD8 are summarized. Finally, we examine the unique structure and function of several CD8/mAB complexes. Collectively, these findings reveal the promising immunomodulatory properties of CD8 and CD8 binding partners, not only to uncover basic immune system function, but to advance efforts towards translational research for targeted immunotherapy.
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  • 文章类型: Journal Article
    人巨细胞病毒(CMV)UL40蛋白及其恒河猴(RhCMV)对应物的信号序列,Rh67,含有一个肽(VMAPRT[L/V][F/I/L/V]L,VL9)由主要组织相容性复合物(MHC)抗原E(MHC-E)呈递。CMVVL9肽取代了来自经典MHC(Ia)信号序列的VL9肽。当CMV破坏抗原加工和呈递以及MHCIa表达时,它们就会丢失。这允许受感染的细胞维持MHC-E表面表达并逃避自然杀伤细胞的杀伤。我们证明了Rh67VL9肽的加工反映了UL40的加工,尽管这两种蛋白质之间缺乏序列保守性。两种VL9肽的加工依赖于宿主蛋白酶信号肽肽酶对其信号序列的切割。如先前针对UL40所示,通过Rh67上调MHC-E表达仅需要其信号序列,VL9上游的序列对于赋予TAP独立性至关重要,与抗原加工相关的转运蛋白。我们的结果还表明,成熟的UL40和Rh67蛋白通过降低MHCIa的表面表达来促进CMV免疫逃避。出乎意料的是,尽管Rh67VL9肽对Rh67的作用具有抗性,但UL40可以部分抵消其自身VL9肽介导的MHC-E表达的上调。这表明两种VL9肽上调MHC-E的机制存在差异,并且将需要进一步的工作来确定是否有任何此类差异对使用人CMV作为载体将RhCMV载体的猿猴免疫缺陷病毒(SIV)疫苗翻译为HIV-1具有影响。
    目的:恒河猴巨细胞病毒(RhCMV)介导的猿猴免疫缺陷病毒(SIV)疫苗在恒河猴中诱导的保护性免疫应答取决于疫苗中病毒Rh67基因的存在。Rh67蛋白含有一种肽,该肽允许RhCMV感染的细胞在细胞表面维持主要组织相容性复合物(MHC)抗原E的表达。我们证明了这种肽的生产,称为“VL9”,反映了人巨细胞病毒(CMV)蛋白UL40中存在的等效肽,尽管两种CMV蛋白之间的序列相似性很小。我们还表明,成熟的UL40和Rh67蛋白,没有前面描述的功能,还通过减少对免疫系统检测感染细胞重要的MHC蛋白的细胞表面表达来促进CMV免疫逃避。尽管有这些相似之处,我们的工作还揭示了Rh67和UL40之间的可能差异,这些差异可能对使用人类CMV作为潜在HIV-1疫苗的载体有影响.
    The signal sequences of the human cytomegalovirus (CMV) UL40 protein and its rhesus CMV (RhCMV) counterpart, Rh67, contain a peptide (VMAPRT[L/V][F/I/L/V]L, VL9) that is presented by major histocompatibility complex (MHC) antigen E (MHC-E). The CMV VL9 peptides replace VL9 peptides derived from classical MHC (Ia) signal sequences, which are lost when CMV disrupts antigen processing and presentation and MHC Ia expression. This allows infected cells to maintain MHC-E surface expression and escape killing by Natural Killer cells. We demonstrate that processing of the Rh67 VL9 peptide mirrors that of UL40, despite the lack of sequence conservation between the two proteins. Processing of both VL9 peptides is dependent on cleavage of their signal sequences by the host protease signal peptide peptidase. As previously shown for UL40, up-regulation of MHC-E expression by Rh67 requires only its signal sequence, with sequences upstream of VL9 critical for conferring independence from TAP, the transporter associated with antigen processing. Our results also suggest that the mature UL40 and Rh67 proteins contribute to CMV immune evasion by decreasing surface expression of MHC Ia. Unexpectedly, while the Rh67 VL9 peptide is resistant to the effects of Rh67, UL40 can partially counteract the up-regulation of MHC-E expression mediated by its own VL9 peptide. This suggests differences in the mechanisms by which the two VL9 peptides up-regulate MHC-E, and further work will be required to determine if any such differences have implications for translating a RhCMV-vectored simian immunodeficiency virus (SIV) vaccine to HIV-1 using human CMV as a vector.
    OBJECTIVE: The protective immune response induced by a rhesus cytomegalovirus (RhCMV)-vectored simian immunodeficiency virus (SIV) vaccine in rhesus macaques depends on the presence of the viral Rh67 gene in the vaccine. The Rh67 protein contains a peptide that allows the RhCMV-infected cells to maintain expression of major histocompatibility complex (MHC) antigen E at the cell surface. We show that production of this peptide, referred to as \"VL9,\" mirrors that of the equivalent peptide present in the human cytomegalovirus (CMV) protein UL40, despite the little sequence similarity between the two CMV proteins. We also show that the mature UL40 and Rh67 proteins, which have no previously described function, also contribute to CMV immune evasion by reducing cell surface expression of MHC proteins important for the immune system to detect infected cells. Despite these similarities, our work also reveals possible differences between Rh67 and UL40, and these may have implications for the use of human CMV as the vector for a potential HIV-1 vaccine.
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  • 文章类型: Journal Article
    T细胞衔接剂(TCE)由于其高度有效的根除癌细胞的能力而成为一类不可或缺的生物治疗剂。然而,经典的CD3靶向TCEs的广泛应用受到与系统性CD4+T细胞活化和细胞因子异常释放相关的狭窄治疗指数(TI)的限制.规避泛CD3+T细胞的全身活化和降低细胞因子释放综合征风险的一种有吸引力的方法是重新定向T细胞的特定亚群。一个有希望的策略是使用肽-主要组织相容性I类双特异性抗体(pMHC-IgG),它们已经成为TCE的一种有趣的方式,基于它们选择性重定向高反应性病毒特异性效应记忆细胞毒性CD8+T细胞以消除癌细胞的能力。然而,这些效应记忆细胞在人外周血单核细胞(PBMC)中的相对低的频率可能会阻碍它们作为效应细胞的重定向用于临床应用。为了减轻这种潜在的限制,我们在这里报告了pMHC-IgG衍生物的产生,称为引导pMHC分期(GPS),其携带单价白细胞介素-2(IL-2)突变蛋白(H16A,F42A).使用抗表皮生长因子受体(EGFR)臂作为概念验证,与单链HLA-A*02:01/CMVpp65pMHC融合部分配对的肿瘤相关抗原,我们在体外证明了IL-2装甲的GPS模式强劲地扩增CMVpp65特异性CD8+效应记忆T细胞,并诱导针对靶癌细胞的强效细胞毒活性.类似于GPS,与类似的CD3靶向的TCE相比,IL-2装甲的GPS分子诱导调节的T细胞活化和降低的细胞因子释放曲线。在体内,我们显示IL-2装甲GPS,但不是相应的GPS,在NSG小鼠模型中有效扩增从未刺激的人PBMC移植的CMVpp65CD8+T细胞。最后,我们证明,IL-2装甲的GPS模式在人新生儿Fc受体转基因小鼠中表现出良好的发育特征和单克隆抗体样的药代动力学特性。总的来说,IL-2装甲GPS代表了一种有吸引力的治疗癌症的方法,具有诱导疫苗样抗病毒T细胞扩增的潜力,免疫细胞重定向作为TCE,并且由于细胞因子释放减少而显著加宽TI。
    T cell engagers (TCEs) are becoming an integral class of biological therapeutic owing to their highly potent ability to eradicate cancer cells. Nevertheless, the widespread utility of classical CD3-targeted TCEs has been limited by narrow therapeutic index (TI) linked to systemic CD4+ T cell activation and aberrant cytokine release. One attractive approach to circumvent the systemic activation of pan CD3+ T cells and reduce the risk of cytokine release syndrome is to redirect specific subsets of T cells. A promising strategy is the use of peptide-major histocompatibility class I bispecific antibodies (pMHC-IgGs), which have emerged as an intriguing modality of TCE, based on their ability to selectively redirect highly reactive viral-specific effector memory cytotoxic CD8+ T cells to eliminate cancer cells. However, the relatively low frequency of these effector memory cells in human peripheral blood mononuclear cells (PBMCs) may hamper their redirection as effector cells for clinical applications. To mitigate this potential limitation, we report here the generation of a pMHC-IgG derivative known as guided-pMHC-staging (GPS) carrying a covalent fusion of a monovalent interleukin-2 (IL-2) mutein (H16A, F42A). Using an anti-epidermal growth factor receptor (EGFR) arm as a proof-of-concept, tumor-associated antigen paired with a single-chain HLA-A *02:01/CMVpp65 pMHC fusion moiety, we demonstrate in vitro that the IL-2-armored GPS modality robustly expands CMVpp65-specific CD8+ effector memory T cells and induces potent cytotoxic activity against target cancer cells. Similar to GPS, IL-2-armored GPS molecules induce modulated T cell activation and reduced cytokine release profile compared to an analogous CD3-targeted TCE. In vivo we show that IL-2-armored GPS, but not the corresponding GPS, effectively expands grafted CMVpp65 CD8+ T cells from unstimulated human PBMCs in an NSG mouse model. Lastly, we demonstrate that the IL-2-armored GPS modality exhibits a favorable developability profile and monoclonal antibody-like pharmacokinetic properties in human neonatal Fc receptor transgenic mice. Overall, IL-2-armored GPS represents an attractive approach for treating cancer with the potential for inducing vaccine-like antiviral T cell expansion, immune cell redirection as a TCE, and significantly widened TI due to reduced cytokine release.
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  • 文章类型: Journal Article
    细胞界面处的受体-配体相互作用引发细胞通讯和效应子功能所必需的信号级联。具体来说,T细胞受体(TCR)与抗原呈递细胞上主要组织相容性复合物(pMHC)分子呈递的病原体衍生肽的相互作用对于T细胞活化至关重要。绑定持续时间,或停留时间,TCR-pMHC相互作用与下游信号传导功效相关,与弱激动剂相比,强激动剂表现出更长的寿命。传统的表面等离子体共振(SPR)方法量化了3D亲和力,但缺乏细胞环境,无法考虑膜波动等因素。近年来,单分子Förster共振能量转移(smFRET)已用于测量细胞环境中TCR-pMHC相互作用的2D结合动力学。这里,我们介绍了一个严格的数学模型的基础上生存分析,以确定指数分布的受体-配体相互作用的寿命,通过模拟数据进行验证。此外,我们开发了一个全面的分析管道,从原始显微镜图像中提取相互作用的寿命,证明了模型在多个TCR-pMHC对中的准确性和鲁棒性。我们的新软件套件可自动化数据处理,以提高吞吐量并减少偏差。这种方法为研究T细胞激活机制提供了一种完善的工具,提供对免疫反应调节的见解。
    Receptor-ligand interactions at cell interfaces initiate signaling cascades essential for cellular communication and effector functions. Specifically, T cell receptor (TCR) interactions with pathogen-derived peptides presented by the major histocompatibility complex (pMHC) molecules on antigen-presenting cells are crucial for T cell activation. The binding duration, or dwell time, of TCR-pMHC interactions correlates with downstream signaling efficacy, with strong agonists exhibiting longer lifetimes compared to weak agonists. Traditional surface plasmon resonance (SPR) methods quantify 3D affinity but lack cellular context and fail to account for factors like membrane fluctuations. In the recent years, single-molecule Förster resonance energy transfer (smFRET) has been applied to measure 2D binding kinetics of TCR-pMHC interactions in a cellular context. Here, we introduce a rigorous mathematical model based on survival analysis to determine exponentially distributed receptor-ligand interaction lifetimes, verified through simulated data. Additionally, we developed a comprehensive analysis pipeline to extract interaction lifetimes from raw microscopy images, demonstrating the model\'s accuracy and robustness across multiple TCR-pMHC pairs. Our new software suite automates data processing to enhance throughput and reduce bias. This methodology provides a refined tool for investigating T cell activation mechanisms, offering insights into immune response modulation.
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  • 文章类型: Journal Article
    αβT细胞是适应性免疫系统的关键组成部分;它们在健康期间维持组织和免疫稳态,在病原体感染后提供杀菌免疫,并能够消除转化的肿瘤细胞。这些不同功能的基础是在每个成熟T细胞(TCR)上表达的独特抗原受体的配体特异性,它赋予淋巴细胞在细胞自治中表现的能力,疾病背景的特定方式。克隆特异性行为特性最初是在T细胞发育过程中建立的,当时胸腺细胞使用TCR识别主要组织相容性复合物(MHC)和MHC样配体来指导存活与死亡,并分化成过多的炎症和调节性T细胞谱系。这里,我们回顾了预选胸腺细胞库的配体特异性,并认为TCR信号的发育阶段特异性改变控制T细胞亚谱系的交叉反应性和外源与自身特异性。
    αβ T cells are critical components of the adaptive immune system; they maintain tissue and immune homeostasis during health, provide sterilizing immunity after pathogen infection, and are capable of eliminating transformed tumor cells. Fundamental to these distinct functions is the ligand specificity of the unique antigen receptor expressed on each mature T cell (TCR), which endows lymphocytes with the ability to behave in a cell-autonomous, disease context-specific manner. Clone-specific behavioral properties are initially established during T cell development when thymocytes use TCR recognition of major histocompatibility complex (MHC) and MHC-like ligands to instruct survival versus death and to differentiate into a plethora of inflammatory and regulatory T cell lineages. Here, we review the ligand specificity of the preselection thymocyte repertoire and argue that developmental stage-specific alterations in TCR signaling control cross-reactivity and foreign versus self-specificity of T cell sublineages.
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  • 文章类型: Journal Article
    健康和疾病过程中抗原特异性T细胞的鉴定和表征仍然是提高我们对免疫病理生理学理解的关键。通过开发肽:MHC四聚体试剂,已经大大推进了在内源性T细胞库内追踪抗原特异性T细胞群体的技术挑战。这些与抗原肽表位复合的I类或II类MHC分子的荧光标记可溶性多聚体直接与具有相应T细胞受体(TCR)特异性的T细胞结合,因此,鉴定处于其天然状态的抗原特异性T细胞群体,而不需要通过离体刺激诱导的功能性应答。对于极其罕见的人群来说,可以磁性富集四聚体结合的T细胞以提高检测的灵敏度和可靠性。随着组织驻留T细胞免疫研究的深入,迫切需要鉴定转运并驻留在非淋巴组织中的抗原特异性T细胞。在这个协议中,我们为小鼠肺内存在的抗原特异性T细胞的分离和表征提供了一套详细的说明.这涉及从消化的肺组织中分离T细胞,然后进行一般的T细胞磁性富集步骤和四聚体染色以进行流式细胞术分析和分选。本协议中强调的步骤利用常见的技术和容易获得的试剂,几乎所有从事小鼠T细胞免疫学的研究人员都可以使用它,并且高度适应于存在于肺内的任何低频率抗原特异性T细胞群的各种下游分析。
    The identification and characterization of antigen-specific T cells during health and disease remains a key to improving our understanding of immune pathophysiology. The technical challenges of tracking antigen-specific T cell populations within the endogenous T cell repertoire have been greatly advanced by the development of peptide:MHC tetramer reagents. These fluorescently labeled soluble multimers of MHC class I or class II molecules complexed to antigenic peptide epitopes bind directly to T cells with corresponding T cell receptor (TCR) specificity and can, therefore, identify antigen-specific T cell populations in their native state without a requirement for a functional response induced by ex vivo stimulation. For exceedingly rare populations, tetramer-bound T cells can be magnetically enriched to increase the sensitivity and reliability of detection. As the investigation of tissue-resident T cell immunity deepens, there is a pressing need to identify antigen-specific T cells that traffic to and reside in nonlymphoid tissues. In this protocol, we present a detailed set of instructions for the isolation and characterization of antigen-specific T cells present within mouse lungs. This involves the isolation of T cells from digested lung tissue followed by a general T cell magnetic enrichment step and tetramer staining for flow cytometry analysis and sorting. The steps highlighted in this protocol utilize common techniques and readily available reagents, making it accessible for nearly any researcher engaged in mouse T cell immunology, and are highly adaptable for a variety of downstream analyses of any low frequency antigen-specific T cell population residing within the lungs.
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  • 文章类型: Journal Article
    过去二十年代,组织工程已迅速发展,以解决器官供体短缺的问题。已经开发了去细胞化技术以减轻移植中的免疫排斥和同种异体反应。然而,有效脱细胞的明确定义仍然难以捉摸。本研究使用人筋膜模型比较了各种去细胞化方案。形态学,结构和细胞毒性/活力分析表明,所有五个测试方案是等效的,符合Crapo成功脱细胞的标准。有趣的是,只有大鼠体内免疫试验显示差异。只有一个方案显示人类白细胞抗原(HLA)含量低于1%残留阈值,在一个月后没有大鼠抗人IgG转换的情况下阻止大鼠免疫的唯一标准(7组中每组N=4个供体,加上阴性和阳性对照,n=28)。通过遵守一套完善的标准,即缺乏可见的核材料,<50ngDNA/mg干重的细胞外基质,和<1%残余HLA含量,潜在的不良宿主反应可以大大减少。总之,这项研究强调了在脱细胞方案中不仅要考虑核成分,还要考虑主要组织相容性复合物的重要性,并提出了新的指南,以促进更安全的临床开发和使用生物工程支架。
    Last twenties, tissue engineering has rapidly advanced to address the shortage of organ donors. Decellularization techniques have been developed to mitigate immune rejection and alloresponse in transplantation. However, a clear definition of effective decellularization remains elusive. This study compares various decellularization protocols using the human fascia lata model. Morphological, structural and cytotoxicity/viability analyses indicated that all the five tested protocols were equivalent and met Crapo\'s criteria for successful decellularization. Interestingly, only the in vivo immunization test on rats revealed differences. Only one protocol exhibited Human Leucocyte Antigen (HLA) content below 1% residual threshold, the only criterion preventing rat immunization with an absence of rat anti-human IgG switch after one month (N=4 donors for each of the 7 groups, added by negative and positive controls, n=28). By respecting a refined set of criteria, i.e. lack of visible nuclear material, <50ng DNA/mg dry weight of extracellular matrix, and <1% residual HLA content, the potential for adverse host reactions can be drastically reduced. In conclusion, this study emphasizes the importance of considering not only nuclear components but also major histocompatibility complex in decellularization protocols and proposes new guidelines to promote safer clinical development and use of bioengineered scaffolds.
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  • 文章类型: Journal Article
    免疫治疗是犬肥大细胞瘤(MCT)的一种有前途的替代疗法。然而,通过下调主要组织相容性复合物(MHC)分子来逃避免疫识别可能会降低治疗效率。通过干扰素-γ(IFN-γ)增强MHC表达对于有效的免疫治疗至关重要。使用源自不同组织起源的内部和参考犬MCT细胞系。IFN-γ处理对细胞活力的影响,MHC分子的表达水平,以及通过MTT法评估细胞凋亡,RT-qPCR和流式细胞术。结果表明,IFN-γ处理显著影响犬MCT细胞系的活力,在不同的细胞系中观察到不同的反应。值得注意的是,IFN-γ治疗增加MHCI和MHCII的表达,可能增强免疫识别和MCT细胞清除。PBMC介导的细胞毒性测定中的流式细胞术分析显示,IFN-γ处理的和未处理的犬MCT细胞系之间的总体凋亡在各种靶标与效应子比率中没有显著差异。然而,在IFN-γ处理的C18和CMMC细胞系中观察到晚期和总凋亡细胞百分比更高的趋势,但不在VIMC和CoMS细胞系中。这些结果表明在不同的犬MCT细胞系中对IFN-γ处理的不同应答。总之,我们的研究表明,IFN-γ在通过上调MHC表达增强免疫识别和清除MCT细胞中的潜在治疗作用,并可能促进细胞凋亡,尽管不同细胞系的反应不同。进一步的研究是必要的,以阐明潜在的机制和评估IFN-γ的疗效在体内模型。
    Immunotherapy is a promising alternative treatment for canine mast cell tumour (MCT). However, evasion of immune recognition by downregulating major histocompatibility complex (MHC) molecules might decline treatment efficiency. Enhancing MHC expression through interferon-gamma (IFN-γ) is crucial for effective immunotherapy. In-house and reference canine MCT cell lines derived from different tissue origins were used. The impacts of IFN-γ treatment on cell viability, expression levels of MHC molecules, as well as cell apoptosis were evaluated through the MTT assay, RT-qPCR and flow cytometry. The results revealed that IFN-γ treatment significantly influenced the viability of canine MCT cell lines, with varying responses observed among different cell lines. Notably, IFN-γ treatment increased the expression of MHC I and MHC II, potentially enhancing immune recognition and MCT cell clearance. Flow cytometry analysis in PBMCs-mediated cytotoxicity assays showed no significant differences in overall apoptosis between IFN-γ treated and untreated canine MCT cell lines across various target-to-effector ratios. However, a trend towards higher percentages of late and total apoptotic cells was observed in the IFN-γ treated C18 and CMMC cell lines, but not in the VIMC and CoMS cell lines. These results indicate a variable response to IFN-γ treatment among different canine MCT cell lines. In summary, our study suggests IFN-γ\'s potential therapeutic role in enhancing immune recognition and clearance of MCT cells by upregulating MHC expression and possibly promoting apoptosis, despite variable responses across different cell lines. Further investigations are necessary to elucidate the underlying mechanisms and evaluate IFN-γ\'s efficacy in in vivo models.
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  • 文章类型: Journal Article
    供体和受体主要组织相容性复合物(MHC)分子的肽呈递是移植中T细胞反应的主要驱动因素。在这次审查中,我们致力于一个新兴的感兴趣领域,免疫肽组在移植中的应用,并描述了使用肽靶向同种反应性T细胞的潜在机会。免疫肽组,呈现在个体MHC上的一组肽,在免疫监视中起着关键作用。在移植中,免疫肽组受MHC衍生肽的影响很大,描绘与同种异体反应性有关的不同肽库的关键子集。更好地了解移植中的免疫肽组有可能开辟新的鉴定方法,表征,纵向量化,和治疗靶向供体特异性T细胞,并最终支持更个性化的免疫疗法,以防止排斥和促进同种异体移植耐受。
    The peptide presentation by donor and recipient major histocompatibility complex (MHC) molecules is the major driver of T-cell responses in transplantation. In this review, we address an emerging area of interest, the application of immunopeptidome in transplantation, and describe the potential opportunities that exist to use peptides for targeting alloreactive T cells. The immunopeptidome, the set of peptides presented on an individual\'s MHC, plays a key role in immune surveillance. In transplantation, the immunopeptidome is heavily influenced by MHC-derived peptides, delineating a key subset of the diverse peptide repertoire implicated in alloreactivity. A better understanding of the immunopeptidome in transplantation has the potential to open up new approaches to identify, characterize, longitudinally quantify, and therapeutically target donor-specific T cells and ultimately support more personalized immunotherapies to prevent rejection and promote allograft tolerance.
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  • 文章类型: Journal Article
    由于其在感染中的作用,主要的组织相容性复合物在脊椎动物免疫系统中起着至关重要的作用。疾病和自身免疫,或“自我”的认可。有袋动物MHCII类基因显示出与异端MHCII类基因的差异,并且是哺乳动物的独特分类单元,它们生出了超生的和免疫上幼稚的年轻人,为研究免疫系统的进化提供了一个合适的研究系统。此外,有袋动物中的MHC与疾病相关,包括考拉对衣原体感染的易感性。由于基因家族的复杂性,自动注释是不可能的,因此我们在29个有袋动物物种中手动注释384个II类MHC基因。我们发现Dasyuromorphia顺序和伪足科的有袋MHC库的关键成分丢失。我们进行PGLS分析以显示我们发现的基因损失是真实的基因损失,而不是未解决的基因组组装的伪像。我们调查了基因座数量与生活史特征之间的关联,包括有袋动物谱系的寿命和生殖输出,并假设基因丢失可能与怀孕和生殖相关的能量成本和权衡有关。我们发现支持产仔数是DBA和DBB基因座数量的重要预测因子,表明免疫力和生殖的能量要求之间的权衡。此外,我们强调了Dasyuridae物种对瘤形成的易感性增加以及与MHC基因丢失的潜在联系。最后,这些注释为免疫遗传学研究界提供了宝贵的资源,可以向前发展并进一步研究有袋动物MHC基因的多样性。
    The major histocompatibility complex (MHC) plays a vital role in the vertebrate immune system due to its role in infection, disease and autoimmunity, or recognition of \"self\". The marsupial MHC class II genes show divergence from eutherian MHC class II genes and are a unique taxon of therian mammals that give birth to altricial and immunologically naive young providing an opportune study system for investigating evolution of the immune system. Additionally, the MHC in marsupials has been implicated in disease associations, including susceptibility to Chlamydia pecorum infection in koalas. Due to the complexity of the gene family, automated annotation is not possible so here we manually annotate 384 class II MHC genes in 29 marsupial species. We find losses of key components of the marsupial MHC repertoire in the Dasyuromorphia order and the Pseudochiridae family. We perform PGLS analysis to show the gene losses we find are true gene losses and not artifacts of unresolved genome assembly. We investigate the associations between the number of loci and life history traits, including lifespan and reproductive output in lineages of marsupials and hypothesize that gene loss may be linked to the energetic cost and tradeoffs associated with pregnancy and reproduction. We found support for litter size being a significant predictor of the number of DBA and DBB loci, indicating a tradeoff between the energetic requirements of immunity and reproduction. Additionally, we highlight the increased susceptibility of Dasyuridae species to neoplasia and a potential link to MHC gene loss. Finally, these annotations provide a valuable resource to the immunogenetics research community to move forward and further investigate diversity in MHC genes in marsupials.
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