MYC rearrangement

MYC 重排
  • 文章类型: Journal Article
    弥漫性大B细胞淋巴瘤(DLBCL)是一种异质性疾病,其特征是部分患者表现出治疗抗性和不良预后。基因组测定已被广泛用于鉴定以MYC重排为特征的高风险个体。BCL2和BCL6基因。这些患者通常接受更积极的治疗;然而,他们的治疗结果仍然存在显著差异.这项研究引入了来自基因表达谱的MYC签名评分(MYCSS),专门设计用于评估DLBCL患者的MYC过度激活。MYCSS在几个独立的队列中进行了验证,以评估其根据MYC相关的遗传和分子畸变对患者进行分层的能力。与传统的MYC生物标志物相比,提高了预后评估的准确性。我们的结果表明,MYCSS显着改善了预后准确性,超越了专注于遗传畸变的常规MYC生物标志物。更重要的是,我们发现,通过传统MYC指标确定为高风险的患者中,近50%与没有MYC畸变的患者具有相似的生存前景.这些患者可能受益于标准的基于GCB的治疗,而不是更积极的治疗。MYCSS提供了一个识别高风险患者的强大签名,协助DLBCL的精确治疗,并尽量减少过度治疗的可能性。
    Diffuse large B-cell lymphoma (DLBCL) is a heterogeneous disease characterized by a subset of patients who exhibit treatment resistance and poor prognoses. Genomic assays have been widely employed to identify high-risk individuals characterized by rearrangements in the MYC, BCL2 and BCL6 genes. These patients typically undergo more aggressive therapeutic treatments; however, there remains a significant variation in their treatment outcomes. This study introduces an MYC signature score (MYCSS) derived from gene expression profiles, specifically designed to evaluate MYC overactivation in DLBCL patients. MYCSS was validated across several independent cohorts to assess its ability to stratify patients based on MYC-related genetic and molecular aberrations, enhancing the accuracy of prognostic evaluations compared to conventional MYC biomarkers. Our results indicate that MYCSS significantly refines prognostic accuracy beyond that of conventional MYC biomarkers focused on genetic aberrations. More importantly, we found that nearly 50% of patients identified as high risk by traditional MYC metrics actually share similar survival prospects with those having no MYC aberrations. These patients may benefit from standard GCB-based therapies rather than more aggressive treatments. MYCSS provides a robust signature that identifies high-risk patients, aiding in the precision treatment of DLBCL, and minimizing the potential for overtreatment.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

    求助全文

  • 文章类型: Journal Article
    荧光原位杂交(FISH)是一项重要的辅助研究,用于鉴定具有MYC的大B细胞淋巴瘤的临床侵袭性亚群,BCL2或BCL6重排。小体积活检,如细针穿刺活检(FNAB)和芯针活检(CNB)越来越多地用于诊断淋巴瘤,并获得辅助研究的材料,如FISH。然而,尚未对FISH在小型活检中的表现进行全面评估或与手术活检进行比较.
    我们描述了MYC的结果,一系列222个活检标本中的BCL2和BCL6FISH,包括带有单元块的FNAB,CNBs,来自6个学术医疗中心的208名独特患者的手术切除或切开活检。一部分患者接受FNAB,然后从相同或连续的解剖部位进行手术活检(CNB或切除活检),作为相同临床检查的一部分;比较了这些配对标本的FISH结果。
    FISH在所有样本类型中具有约1%的低杂交失败率。FISH在197个标本中的20个(10%)中同时确定了MYC和BCL2重排,在182个标本中的3个(1.6%)中同时确定了MYC和BCL6重排。配对的FNAB和手术活检标本没有显示MYC或BCL2FISH的任何差异;在17例患者中,有34个配对的细胞学和手术标本,所比较的49种FISH探针中只有2种(占所有比较的4%)显示出任何差异,且均位于BCL6基因座.一个差异是由于当与显示BCL6重排的FNAB细胞块相比时,CNB样本的坏死导致假阴性BCL6FISH结果。
    FISH在所有活检类型中均显示相似的杂交失败率。最终,MYC,BCL2或BCL6FISH在配对细胞学和手术标本之间进行比较时显示出96%的一致性,提示使用细胞块的FNAB等同于用于评估DLBCL或HGBCLFISH测试的其他活检替代方法。
    UNASSIGNED: Fluorescence in situ hybridization (FISH) is an essential ancillary study used to identify clinically aggressive subsets of large B-cell lymphomas that have MYC, BCL2, or BCL6 rearrangements. Small-volume biopsies such as fine needle aspiration biopsy (FNAB) and core needle biopsy (CNB) are increasingly used to diagnose lymphoma and obtain material for ancillary studies such as FISH. However, the performance of FISH in small biopsies has not been thoroughly evaluated or compared to surgical biopsies.
    UNASSIGNED: We describe the results of MYC, BCL2, and BCL6 FISH in a series of 222 biopsy specimens, including FNAB with cell blocks, CNBs, and surgical excisional or incisional biopsies from 208 unique patients aggregated from 6 academic medical centers. A subset of patients had FNAB followed by a surgical biopsy (either CNB or excisional biopsy) obtained from the same or contiguous anatomic site as part of the same clinical workup; FISH results were compared for these paired specimens.
    UNASSIGNED: FISH had a low hybridization failure rate of around 1% across all specimen types. FISH identified concurrent MYC and BCL2 rearrangements in 20 of 197 (10%) specimens and concurrent MYC and BCL6 rearrangements in 3 of 182 (1.6%) specimens. The paired FNAB and surgical biopsy specimens did not show any discrepancies for MYC or BCL2 FISH; of the 17 patients with 34 paired cytology and surgical specimens, only 2 of the 49 FISH probes compared (4% of all comparisons) showed any discrepancy and both were at the BCL6 locus. One discrepancy was due to necrosis of the CNB specimen causing a false negative BCL6 FISH result when compared to the FNAB cell block that demonstrated a BCL6 rearrangement.
    UNASSIGNED: FISH showed a similar hybridization failure rate in all biopsy types. Ultimately, MYC, BCL2, or BCL6 FISH showed 96% concordance when compared across paired cytology and surgical specimens, suggesting FNAB with cell block is equivalent to other biopsy alternatives for evaluation of DLBCL or HGBCL FISH testing.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

       PDF(Pubmed)

  • 文章类型: Journal Article
    背景:Myc重排(Myc-R)是与新诊断的多发性骨髓瘤(NDMM)的不良结局相关的有争议的因素。
    目的:本研究旨在评估Myc-R对NDMM患者预后的影响及其与传统高危细胞遗传学异常(HRCA)相比在风险分层中的作用。
    方法:纳入2009年5月至2022年9月的417例NDMM患者。荧光原位杂交(FISH)用于检测Myc-R和其他Myc异常(Myc-OA)。使用Kaplan-Meier方法和对数秩检验分析中位无进展生存期(PFS)和总生存期(OS)。采用多因素Cox回归分析确定独立危险因素。
    结果:在13.7%的患者中发现了Myc-R,14.6%患有Myc-OA。与Myc-OA(24.5个月PFS;29.8个月OS)和Myc阴性(Myc-N)状态(29.8个月PFS)相比,Myc-R患者的中位PFS(15.9个月)和OS(25.1个月)明显更短。29.8个月OS)。与Myc-OA相比,Myc-R与较差的PFS和OS独立相关。单独使用Myc-R的患者中位PFS较低(15.9个月vs.28.1个月,p=0.032)和OS(25.1个月与61.2个月,p=0.04)与传统单一HRCA相比。
    结论:研究表明,传统的单一HRCA可能不会显著影响NDMM患者的生存。然而,将Myc重排或传统的双重/三重打击HRCA纳入风险分层模型可提高其预测价值,强调Myc重排在风险评估中的重要性。
    结论:Myc重排是NDMM的独立不良预后因素。将Myc重排或多个HRCA纳入风险分层模型可提高其预后价值,为NDMM中的高危因素提供了一个新的视角。
    BACKGROUND: Myc rearrangement (Myc-R) is a controversial factor linked to adverse outcomes in newly diagnosed multiple myeloma (NDMM).
    OBJECTIVE: This study aimed to evaluate the impact of Myc-R on the prognosis of NDMM patients and its role in risk stratification compared with traditional high-risk cytogenetic abnormalities (HRCAs).
    METHODS: A total of 417 NDMM patients enrolled from May 2009 to September 2022 were included. Fluorescence in situ hybridization (FISH) was used to detect Myc-R and other Myc abnormalities (Myc-OA). Median progression-free survival (PFS) and overall survival (OS) were analyzed using Kaplan-Meier methods and log-rank tests. Multivariate Cox regression analysis was used to identify independent risk factors.
    RESULTS: Myc-R was identified in 13.7% of patients, while 14.6% had Myc-OA. Patients with Myc-R had significantly shorter median PFS (15.9 months) and OS (25.1 months) compared with those with Myc-OA (24.5 months PFS; 29.8 months OS) and Myc-negative (Myc-N) status (29.8 months PFS, 29.8 months OS). Myc-R was independently associated with worse PFS and OS compared to Myc-OA. Patients with Myc-R alone had inferior median PFS (15.9 months vs. 28.1 months, p = 0.032) and OS (25.1 months vs. 61.2 months, p = 0.04) compared to those with traditional single HRCA.
    CONCLUSIONS: The study suggests that traditional single HRCA may not significantly impact survival in NDMM patients. However, incorporating Myc rearrangement or traditional double/triple-hit HRCAs into the risk stratification model improves its predictive value, highlighting the importance of Myc rearrangement in risk assessment.
    CONCLUSIONS: Myc rearrangement is an independent adverse prognostic factor in NDMM. The incorporation of Myc rearrangement or multiple HRCAs into risk stratification models improves their prognostic value, providing a novel perspective on high-risk factors in NDMM.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

       PDF(Pubmed)

  • 文章类型: Journal Article
    背景:原发性浆细胞白血病(pPCL)的定义已从≥20%修订为≥5%循环浆细胞(CPC)。然而,与CPC相关的确切预后仍存在争议.这项研究旨在研究基于CPC存在的骨髓瘤患者的预后生物标志物。
    方法:对309例连续诊断为多发性骨髓瘤或pPCL的患者进行了综合分析,利用Wright-Giemsa染色的外周血涂片。
    结果:患者按CPC百分比分组:0%(221,71.5%),1-4%(49,15.9%),5-19%(16%,5.2%),≥20%(23,7.4%)。CPC>5%与不利特征相关,包括贫血,肾功能不全,和先进的国际分期系统。常见的细胞遗传学异常,如1q21扩增,17p删除,和Myc重排在CPC阳性患者中普遍存在。CPC≥5%患者的中位无进展生存期(PFS)和总生存期(OS)较短(29.47vs.10.03个月;64.10与12.30个月)。此外,未进行自体造血干细胞移植(ASCT)的CPC阳性患者和一线方案缓解<部分缓解者的PFS和OS较短。此外,软组织相关的髓外疾病和下PFS之间出现关联,而Myc重排与缩写的OS相关。
    结论:CPC阳性患者的生物学特征表现出更大的侵袭性,导致显著缩短PFS和OS。中国共产党的存在,ASCT,总有效率是影响预后的独立因素。虽然没有提出具有CPC的pPCL的新阈值,但Myc重排和CPC阳性可作为多发性骨髓瘤的超高风险因素.
    BACKGROUND: The definition of primary plasma cell leukemia (pPCL) has been revised from ≥20% to ≥5% circulating plasma cells (CPC). However, the precise prognosis associated with CPC remains controversial. This study aimed to investigate prognostic biomarkers for myeloma patients based on CPC presence.
    METHODS: A comprehensive analysis was conducted on 309 consecutive patients diagnosed with either multiple myeloma or pPCL, utilizing peripheral blood smears stained with Wright-Giemsa.
    RESULTS: Patients were grouped by CPC percentage: 0% (221, 71.5%), 1-4% (49, 15.9%), 5-19% (16, 5.2%), ≥20% (23, 7.4%). CPC >5% correlated with unfavorable characteristics, including anemia, renal dysfunction, and advanced International Staging System. Common cytogenetic abnormalities such as 1q21 amplification, 17p deletion, and Myc rearrangement were prevalent among CPC-positive patients. Median progression-free survival (PFS) and overall survival (OS) were shorter in patients with CPC ≥5% (29.47 vs. 10.03 months; 64.10 vs. 12.30 months). Additionally, PFS and OS were shorter in CPC-positive patients without autologous hematopoietic stem cell transplantation (ASCT) and those with response < partial remission to the first-line regimen. Furthermore, an association emerged between soft tissue-related extramedullary disease and inferior PFS, while Myc rearrangement correlated with abbreviated OS.
    CONCLUSIONS: Biological characteristics displayed greater aggressiveness in patients with positive CPC, leading to significantly shorter PFS and OS. The presence of CPC, ASCT, and overall response rate were independent prognostic factors. While no new threshold for pPCL with CPCs is proposed, Myc rearrangements and CPC positivity could serve as ultra-high-risk factors for multiple myeloma.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

    求助全文

  • 文章类型: Journal Article
    儿童/年轻成人(YA)年龄组的MYC重排B细胞淋巴瘤(BCL)在疾病组成上与成人队列有很大差异。然而,关于伴侣基因的数据,同时重新安排,与成人队列相比,这些患者的最终诊断很少。我们旨在表征MYC重排(MYC-R)成熟的光谱,儿科/YA人群中的侵袭性BCL。形态学的回顾性研究,免疫表型,和荧光原位杂交(FISH)结果的患者年龄≤30岁怀疑伯基特淋巴瘤(BL),弥漫性大B细胞淋巴瘤(DLBCL)或高级别B细胞淋巴瘤(HGBCL),并在2013-2022年期间通过FISH进行了MYC-R。包括2558例(129(50%)儿科(<18岁)和129(50%)YA(18-30岁))。小儿(89%)和YA(66%)病例中大多数MYC-RBCL为BL。而双重打击(DH)细胞遗传学(MYC与BCL2和/或BCL6-R,HGBCL-DH)在儿科人群中很少见(2/129,2%),HGBCL-DH随着年龄的增长而增加,在17/129(13%)的YA病例中发现。大多数HGBCL-DH有MYC和BCL6-R,而BCL2-R在两组中均罕见(3/258,1%)。没有IG伴侣的MYC-R在YA组中更为常见(14/116(12%)vs2/128(2%),p=0.001)。儿科到YA的转变的特征是BL的频率降低和MYC-RBCL的遗传异质性增加,伴随MYC和BCL6-R出现DH-BCLFISH评估BCL2和BCL6重排可能不适合儿科人群,但应继续应用于YABCL。
    MYC-rearranged B-cell lymphoma (BCL) in the pediatric/young adult (YA) age group differs substantially in disease composition from adult cohorts. However, data regarding the partner genes, concurrent rearrangements, and ultimate diagnoses in these patients is scarce compared to that in adult cohorts. We aimed to characterize the spectrum of MYC-rearranged (MYC-R) mature, aggressive BCL in the pediatric/YA population. A retrospective study of morphologic, immunophenotypic, and fluorescence in situ hybridization (FISH) results of patients age ≤ 30 years with suspected Burkitt lymphoma (BL), diffuse large B-cell lymphoma (DLBCL) or high-grade B-cell lymphoma (HGBCL), and a MYC-R by FISH between 2013-2022 was performed. Two-hundred fifty-eight cases (129 (50%) pediatric (< 18 years) and 129 (50%) YA (18-30 years)) were included. Most MYC-R BCL in pediatric (89%) and YA (66%) cases were BL. While double-hit (DH) cytogenetics (MYC with BCL2 and/or BCL6-R, HGBCL-DH) was rare in the pediatric population (2/129, 2%), HGBCL-DH increased with age and was identified in 17/129 (13%) of YA cases. Most HGBCL-DH had MYC and BCL6-R, while BCL2-R were rare in both groups (3/258, 1%). MYC-R without an IG partner was more common in the YA group (14/116 (12%) vs 2/128 (2%), p = 0.001). The pediatric to YA transition is characterized by decreasing frequency in BL and increasing genetic heterogeneity of MYC-R BCL, with emergence of DH-BCL with MYC and BCL6-R. FISH to evaluate for BCL2 and BCL6 rearrangements is likely not warranted in the pediatric population but should continue to be applied in YA BCL.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

       PDF(Pubmed)

  • 文章类型: Journal Article
    深度学习应用程序正在成为有前途的新工具,可以支持不同癌症类型的诊断和分类。虽然这样的解决方案对血液恶性肿瘤具有巨大的潜力,有有限的研究描述了在这一领域中使用这样的应用。涉及MYC的双重/三重淋巴瘤(DHLs/THLs)的快速诊断,BCL2和/或BCL6重排对于最佳患者护理是必须的。这里,我们提出了一种新的深度学习工具,用于直接从活检切片的扫描图像诊断DHLs/THLs。总共57次活检,包括训练集中的32例(包括5例DH淋巴瘤病例)和验证集中的25例(包括10例DH/TH病例),包括在内。DHL分类器表现出100%的灵敏度,87%的特异性和0.95的AUC,只有两个假阳性病例,与鱼相比。DHL分类器作为进行常规FISH分析的筛选工具显示出92%的预测值,超过当前使用的标准。这里介绍的工作为潜在使用AI工具识别DH/TH事件提供了概念证明。然而,需要更广泛的后续研究来评估该工具的稳健性,并在不同人群中实现高性能.
    Deep learning applications are emerging as promising new tools that can support the diagnosis and classification of different cancer types. While such solutions hold great potential for hematological malignancies, there have been limited studies describing the use of such applications in this field. The rapid diagnosis of double/triple-hit lymphomas (DHLs/THLs) involving MYC, BCL2 and/or BCL6 rearrangements is obligatory for optimal patient care. Here, we present a novel deep learning tool for diagnosing DHLs/THLs directly from scanned images of biopsy slides. A total of 57 biopsies, including 32 in a training set (including five DH lymphoma cases) and 25 in a validation set (including 10 DH/TH cases), were included. The DHL-classifier demonstrated a sensitivity of 100%, a specificity of 87% and an AUC of 0.95, with only two false positive cases, compared to FISH. The DHL-classifier showed a 92% predictive value as a screening tool for performing conventional FISH analysis, over-performing currently used criteria. The work presented here provides the proof of concept for the potential use of an AI tool for the identification of DH/TH events. However, more extensive follow-up studies are required to assess the robustness of this tool and achieve high performances in a diverse population.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

       PDF(Pubmed)

  • 文章类型: Journal Article
    一小部分具有囊样形态的高级B细胞淋巴瘤(HGBL)仍然知之甚少。我们评估了55例囊状HGBL-NOS,并将其临床病理特征与81例非囊状HGBL-NOS和62例有MYC的囊状HGBL进行了比较。BCL2,有/无BCL6重排(D/THL)。囊样HGBL-NOS患者的临床病理特征与囊样D/THL和非囊样HGBL-NOS患者相似,除了经常有低度B细胞淋巴瘤的病史,骨髓受累与BCL2-R(p<0.05)比拟后者。MYC重排(MYC-R),在40%的囊样HGBL-NOS中检测到,与侵袭性临床病理特征和较差的总生存率(OS)相关,甚至比囊样D/THL更差(p<0.05)。转录组谱分析揭示了一种独特的基因表达模式,在MYC-R囊样HGBL-NOS中富含MYC和P53靶向基因的差异表达基因。52%的囊样HGBL-NOS具有DH样特征,与非囊样HGBL-NOS相似(p=0.73)。囊样HGBL-NOS组的OS与囊样D/THL组相似,但比非囊样组较差(p=0.07)。一起来看,囊样HGBL-NOS是一种侵袭性B细胞淋巴瘤,与非囊样HGBL-NOS具有重叠的临床病理和遗传特征。囊样HGBL-NOS患者的MYC-R确定了一个具有明显侵袭性临床病理特征的高度侵袭性亚组。独特的分子特征和令人沮丧的临床结果。
    A small subset of high-grade B-cell lymphoma (HGBL) with blastoid morphology remains poorly understood. We assessed 55 cases of blastoid HGBL, not otherwise specified (NOS) and compared their clinicopathologic characteristics with those of 81 non-blastoid HGBL-NOS and 62 blastoid HGBL with MYC and BCL2, with or without BCL6 rearrangements (double/triple-hit lymphoma [D/THL]). Patients with blastoid HGBL-NOS showed similar clinicopathologic features to patients with blastoid D/THLs and non-blastoid HGBL-NOS, except more frequently with a history of low-grade B-cell lymphoma, bone marrow involvement, and BCL2 rearrangement (P < .05) compared to the latter. MYC rearrangement (MYC-R), detected in 40% of blastoid HGBL-NOS, was associated with aggressive clinicopathologic features and poorer overall survival, even worse than that of blastoid D/THL (P < .05). Transcriptome profiling revealed a distinct gene expression pattern with differentially expressed genes enriched in MYC and P53-targeted genes in MYC-R blastoid HGBL-NOS. Fifty-two percent of blastoid HGBL-NOS had a double hit-like signature, similar to non-blastoid HGBL-NOS (P = .73). The overall survival of the blastoid HGBL-NOS group was similar to that of the blastoid D/THL group but appeared poorer than that of its non-blastoid counterparts (P = .07). Taken together, blastoid HGBL-NOS is an aggressive B-cell lymphoma that shares overlapping clinicopathologic and genetic features with non-blastoid HGBL-NOS. MYC-R in patients with blastoid HGBL-NOS identifies a highly aggressive subgroup with distinct aggressive clinicopathologic features, unique molecular signatures, and a dismal clinical outcome.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

    求助全文

  • 文章类型: Journal Article
    印第安纳大学(IU)启动了Burkitt淋巴瘤(BL)的荧光原位杂交(FISH)方法,以提高Moi教学和转诊医院(MTRH)的AMPATH参考实验室的诊断准确性和速度埃尔多雷特,肯尼亚。MTRH处BL的标准诊断测试包括活检标本或抽吸物的形态和有限的免疫组织化学面板。
    评估了2016年至2018年参加一项前瞻性研究的19名儿童的肿瘤标本,以改善疑似BL儿童的诊断和分期。收集活检标本或细针穿刺涂片的触摸准备,用Giemsa和/或H&E染色,并由病理学家审查以进行临时诊断。将未染色的载玻片储存并随后处理用于FISH。将重复的载玻片在两个实验室之间分开用于分析。流式细胞术结果可用于所有标本。来自埃尔多雷特新成立的FISH实验室的结果,肯尼亚在印第安纳波利斯进行了交叉验证,印第安纳.
    一致性研究发现,所研究的19个样本中有18个(95%)在两个位置均对一个或两个探针组(MYC和MYC/IGH)产生了可分析的FISH结果。两个FISH实验室之间的结果一致性为94%(17/18)。对于组织病理学诊断为BL的16个标本和三个非BL病例中的两个,FISH结果为100%一致(在IUFISH实验室中没有结果)。对于具有阳性流量结果的标本,FISH与流式细胞术相似,但鼻咽肿瘤的CD10和CD20的流量结果为阳性,但FISH为阴性。在肯尼亚进行的回顾性研究标本的FISH测试的模态周转时间为24至72小时。
    建立了FISH测试,进行了一项试点研究,评估FISH作为肯尼亚儿科人群BL诊断工具的可行性。这项研究在有限的资源环境中支持FISH,以提高非洲BL诊断的准确性和速度。
    UNASSIGNED: Indiana University (IU) initiated fluorescence in situ hybridisation (FISH) methodology for Burkitt Lymphoma (BL) to advance the accuracy and speed of diagnosis in the AMPATH Reference Laboratory at Moi Teaching and Referral Hospital (MTRH) in Eldoret, Kenya. Standard diagnostic testing for BL at MTRH includes morphology of the biopsy specimen or aspirate and limited immunohistochemistry panels.
    UNASSIGNED: Tumour specimens from 19 children enrolled from 2016 to 2018 in a prospective study to improve the diagnosis and staging of children with suspected BL were evaluated. Touch preps from biopsy specimens or smears from fine needle aspiration were collected, stained with Giemsa and/or H&E and reviewed by pathologists to render a provisional diagnosis. Unstained slides were stored and later processed for FISH. Duplicate slides were split between two laboratories for analysis. Flow cytometry results were available for all specimens. Results from the newly established FISH laboratory in Eldoret, Kenya were cross-validated in Indianapolis, Indiana.
    UNASSIGNED: Concordance studies found 18 of 19 (95%) of specimens studied yielded analysable FISH results for one or both probe sets (MYC and MYC/IGH) in both locations. There was 94% (17/18) concordance of results between the two FISH laboratories. FISH results were 100% concordant for the 16 specimens with a histopathological diagnosis of BL and two of three non-BL cases (one case no result in IU FISH lab). FISH was similarly concordant with flow cytometry for specimens with positive flow results with the exception of a nasopharyngeal tumour with positive flow results for CD10 and CD20 but was negative by FISH. The modal turn-around time for FISH testing on retrospective study specimens performed in Kenya ranged between 24 and 72 hours.
    UNASSIGNED: FISH testing was established, and a pilot study performed, to assess the feasibility of FISH as a diagnostic tool for the determination of BL in a Kenyan paediatric population. This study supports FISH in limited resource settings to improve the accuracy and speed of diagnosis of BL in Africa.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

       PDF(Pubmed)

  • 文章类型: Journal Article
    具有11q畸变的高级别B细胞淋巴瘤(LBL-11q)类似于伯基特淋巴瘤(BL),对MYC重排是否定的,并携带11q染色体畸变。已经描述了伴有MYC重排和11q畸变(HGBCL-MYC-11q)的高度B细胞淋巴瘤的罕见病例。在这项研究中,我们报告了临床病理,细胞遗传学,以及4例此类病例的分子研究结果。对组织或骨髓活检进行诊断。核型,荧光原位杂交,基因组微阵列分析,并进行了下一代测序。所有患者均为男性(中位年龄,39年)。3例确诊为BL,其中一人被诊断为弥漫性大B细胞淋巴瘤。核型(2例患者可用)很复杂。在1名患者中,拷贝数分析显示,在1q21.1-q44和13q31.3处增加,13q34处丢失,这是BL中常见的异常。我们所有的病例都显示2个或更多的突变在BL中复发,包括ID3、TP53、DDX3X、CCND3、FBXO1和MYC。2例患者出现GNA13突变,常见于LBL-11q。HGBCL-MYC-11q病例表现出重叠的形态学和免疫表型,以及BL和LBL-11q之间的细胞遗传学和分子特征,突变景观丰富了BL中反复发生的突变。并发MYC重排与11q异常是重要的认识,特别是因为它对它们的分类有影响。
    High-grade B-cell lymphoma with 11q aberrations (LBL-11q) resembles Burkitt lymphoma (BL), is negative for MYC rearrangement, and harbors chromosome 11q aberrations. Rare cases of high-grade B-cell lymphoma with concurrent MYC rearrangement and 11q aberrations (HGBCL-MYC-11q) have been described. In this study, we report the clinicopathologic, cytogenetic, and molecular findings in 4 such cases. Diagnoses were made on tissue or bone marrow biopsies. Karyotype, fluorescence in situ hybridization, genomic microarray analyses, and next-generation sequencing were performed. All patients were male (median age, 39 years). Three cases were diagnosed as BL, while one was diagnosed as diffuse large B-cell lymphoma. Karyotypes (available in 2 patients) were complex. In 1 patient, copy number analysis showed gains at 1q21.1-q44 and 13q31.3 and loss of 13q34, abnormalities typically seen in BL. All of our cases showed 2 or more mutations that are recurrent in BL, including ID3, TP53, DDX3X, CCND3, FBXO1, and MYC. Two cases showed a GNA13 mutation, commonly seen in LBL-11q. Cases of HGBCL-MYC-11q display overlapping morphologic and immunophenotypic, as well as cytogenetic and molecular features between BL and LBL-11q, with a mutational landscape enriched for mutations recurrent in BL. Concurrent MYC rearrangement with 11q abnormalities is important to recognize, especially as it has implications for their classification.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

    求助全文

  • 文章类型: Journal Article
    弥漫性大B细胞淋巴瘤(DLBCL),最常见的非霍奇金淋巴瘤类型,在高达15%的病例中,其特征是MYC重排(MYCR),这些都有不利的预后。由于MYC断点的神秘重排和变化,在高达10%-15%的病例中,MYCR可能无法通过常规方法检测到。在这项研究中,概念研究的回顾性证明,我们试图确定复发性细胞遗传学畸变(RCA),从RCA中生成遗传进展评分(GP),并将其应用于人工智能(AI)算法,以预测已发表病例的核型中的MYC状态。开发的AI算法在我们的机构案例中的性能得到了验证。此外,进行了RCA的细胞遗传学进化模式和临床影响。染色体丢失与MYC-,而在MYCR肿瘤中,1号染色体部分获得显著。MYCR是MYC重排肿瘤的唯一驱动因素改变,进化模式揭示了与基因表达特征相关的RCA。较高的GPS值与MYCR肿瘤相关。随后的AI算法(由RCAs+GPS组成)在预测MYCR时获得了91.4的敏感性和93.8的特异性。使用AI算法对另外59例机构病例的分析显示,敏感性和特异性分别为100%和87%,阳性预测值为92%,阴性预测值为100%。MYCR的病例生存期较短。
    Diffuse large B-cell lymphoma (DLBCL), the most common type of non-Hodgkin lymphoma, is characterized by MYC rearrangements (MYC R) in up to 15% of cases, and these have unfavorable prognosis. Due to cryptic rearrangements and variations in MYC breakpoints, MYC R may be undetectable by conventional methods in up to 10%-15% of cases. In this study, a retrospective proof of concept study, we sought to identify recurrent cytogenetic aberrations (RCAs), generate genetic progression scores (GP) from RCAs and apply these to an artificial intelligence (AI) algorithm to predict MYC status in the karyotypes of published cases. The developed AI algorithm is validated for its performance on our institutional cases. In addition, cytogenetic evolution pattern and clinical impact of RCAs was performed. Chromosome losses were associated with MYC-, while partial gain of chromosome 1 was significant in MYC R tumors. MYC R was the sole driver alteration in MYC-rearranged tumors, and evolution patterns revealed RCAs associated with gene expression signatures. A higher GPS value was associated with MYC R tumors. A subsequent AI algorithm (composed of RCAs + GPS) obtained a sensitivity of 91.4 and specificity of 93.8 at predicting MYC R. Analysis of an additional 59 institutional cases with the AI algorithm showed a sensitivity and specificity of 100% and 87% each with positive predictive value of 92%, and a negative predictive value of 100%. Cases with a MYC R showed a shorter survival.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

       PDF(Pubmed)

公众号