MD5

MD5
  • 文章类型: Journal Article
    马立克氏病(MD),由马立克氏病病毒(MDV)引起,是鸡中常见的传染性肿瘤疾病,也是第一种可通过疫苗接种预防的肿瘤疾病。然而,疫苗不能完全预防致命的MDV感染,允许疫苗和强毒MDV在同一只鸡中长时间共存。本研究旨在使用实时PCR方法研究强毒株Md5和rHVT-IBD疫苗在不同鸡组织中的病毒载量变化。结果表明,rHVT-IBD疫苗显著降低了MDV-Md5在不同器官的病毒载量,而与Md5共感染时,rHVT-IBD的负荷显着增加。此外,在鸡中与Md5和rHVT-IBD共感染不仅改变了两种病毒的原始病毒载量,而且影响了接种后14天Md5的阳性率。阳性率从100%下降到14.29%(羽毛提示),0%(皮肤),33.33%(肝脏),16.67%(脾),28.57%(胸腺),33.33%(法氏囊),和66.67%(PBL),分别。这项研究增强了我们对HVT载体疫苗与鸡中非常强的MDV之间相互作用的理解,并为MD疫苗的未来发展提供了有价值的见解。
    Marek\'s disease (MD), caused by the Marek\'s disease virus (MDV), is a common infectious tumor disease in chickens and was the first neoplastic disease preventable by vaccination. However, the vaccine cannot completely prevent virulent MDV infections, allowing both the vaccine and virulent MDV to coexist in the same chicken for extended periods. This study aims to investigate the changes in viral load of the very virulent strain Md5 and the rHVT-IBD vaccine in different chicken tissues using a real-time PCR assay. The results showed that the rHVT-IBD vaccine significantly reduced the viral load of MDV-Md5 in different organs, while the load of rHVT-IBD was significantly increased when co-infected with Md5. Additionally, co-infection with Md5 and rHVT-IBD in chickens not only changed the original viral load of both viruses but also affected the positive rate of Md5 at 14 days post-vaccination. The positive rate decreased from 100% to 14.29% (feather tips), 0% (skin), 33.33% (liver), 16.67% (spleen), 28.57% (thymus), 33.33% (bursa), and 66.67% (PBL), respectively. This study enhances our understanding of the interactions between HVT vector vaccines and very virulent MDV in chickens and provides valuable insights for the future development of MD vaccines.
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  • 文章类型: Journal Article
    了解Marek病病毒(MDV)毒力的分子基础的当前策略主要包括对具有不同表型的菌株之间的不同核苷酸进行分类。然而,尽管已确认MDV毒株作为混合病毒群体存在,但大多数MDV比较基因组研究依赖于先前发表的共有基因组.为了评估依赖已发表的MDV共有基因组的菌株间基因组比较的可靠性,通过对病毒原种和培养的田间分离株进行测序,我们获得了疫苗株CVI988(Rispens)的另外两个共有基因组和剧毒株Md5的另外两个共有基因组.结合已发表的CVI988和Md5的基因组,这使我们能够在同一菌株的多个共有基因组之间进行三向比较。我们发现CVI988的共有基因组可以在多达236个位置变化,涉及13个开放阅读框(ORF)。相比之下,我们发现Md5基因组仅在涉及单个ORF的11个位置变化。值得注意的是,我们能够在CVI988GenBank的独特长区域中鉴定出3个单核苷酸多态性(SNP),在独特短(US)区域中鉴定出16个SNP。在任一CVI988Pirbright中均不存在的BAC。实验室或CVI988USDA。PA.字段。先前描述为CVI988的天然重组体的田间菌株的重组分析在CVI988Pirbright的任一情况下在US区域均未产生交叉事件的证据。实验室或CVI988USDA。PA.字段用于表示CVI988而不是CVI988GenBank。BAC。我们还能够确认CVI988和Md5种群是混合的,表现出总共29个和27个高置信度次要变异位置,分别。然而,我们在CVI988GenBank独特区域的19个SNP对应的位置没有发现任何微小变异的证据.BAC。一起来看,我们的研究结果表明,继续依赖CVI988相同的已发表的共有基因组可能导致CVI988和毒株之间基因组差异的高估,并且每个毒株可能需要多个共有基因组以确保毒株间基因组比较的准确性.
    Current strategies to understand the molecular basis of Marek\'s disease virus (MDV) virulence primarily consist of cataloging divergent nucleotides between strains with different phenotypes. However, most comparative genomic studies of MDV rely on previously published consensus genomes despite the confirmed existence of MDV strains as mixed viral populations. To assess the reliability of interstrain genomic comparisons relying on published consensus genomes of MDV, we obtained two additional consensus genomes of vaccine strain CVI988 (Rispens) and two additional consensus genomes of the very virulent strain Md5 by sequencing viral stocks and cultured field isolates. In conjunction with the published genomes of CVI988 and Md5, this allowed us to perform three-way comparisons between multiple consensus genomes of the same strain. We found that consensus genomes of CVI988 can vary in as many as 236 positions involving 13 open reading frames (ORFs). By contrast, we found that Md5 genomes varied only in 11 positions involving a single ORF. Notably, we were able to identify 3 single-nucleotide polymorphisms (SNPs) in the unique long region and 16 SNPs in the unique short (US) region of CVI988GenBank.BAC that were not present in either CVI988Pirbright.lab or CVI988USDA.PA.field. Recombination analyses of field strains previously described as natural recombinants of CVI988 yielded no evidence of crossover events in the US region when either CVI988Pirbright.lab or CVI988USDA.PA.field were used to represent CVI988 instead of CVI988GenBank.BAC. We were also able to confirm that both CVI988 and Md5 populations were mixed, exhibiting a total of 29 and 27 high-confidence minor variant positions, respectively. However, we did not find any evidence of minor variants in the positions corresponding to the 19 SNPs in the unique regions of CVI988GenBank.BAC. Taken together, our findings suggest that continued reliance on the same published consensus genome of CVI988 may have led to an overestimation of genomic divergence between CVI988 and virulent strains and that multiple consensus genomes per strain may be necessary to ensure the accuracy of interstrain genomic comparisons.
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  • 文章类型: Journal Article
    具有完全或部分相同的内部类别的图像数据库的连续发布极大地恶化了用于真正全面的医疗诊断的自主计算机辅助诊断(CAD)系统的生产。第一个挑战是医学图像数据库的频繁大量发布,这通常有两个常见的缺点:图像复制和损坏。具有相同类别或类别的相同数据的许多后续版本没有明确的证据表明在图像数据库之间的这些相同类别的串联成功。这个问题是基于假设的实验路径上的绊脚石,用于产生可以成功地对所有这些模型进行正确分类的单一学习模型。删除冗余数据,提高性能,优化能源资源是最具挑战性的方面。在这篇文章中,我们提出了一个全球数据聚合规模模型,该模型包含从特定的全球资源中选择的六个图像数据库。建议的有效学习器基于训练任何给定数据发布中的所有独特模式,从而假设创建一个独特的数据集。HashMD5算法(MD5)为每个图像生成一个唯一的哈希值,使其适合重复删除。T分布随机邻域嵌入(t-SNE),使用可调的困惑参数,可以表示数据维度。HashMD5和t-SNE算法都是递归应用的,生成一个平衡和统一的数据库,每个类别包含相等的样本:正常,肺炎,和2019年冠状病毒病(COVID-19)。我们使用InceptionV3预训练模型和各种评估指标评估了所有建议数据和新自动化版本的性能。所提出的规模模型的性能结果显示出比传统的数据聚合更可观的结果,达到98.48%的高精度,随着高精度,召回,和F1得分。结果已通过统计t检验证明,产生t值和p值。重要的是要强调,所有的t值都是不可否认的重要,p值提供了反对零假设的无可辩驳的证据。此外,值得注意的是,当使用相同的因素诊断各种肺部感染时,Final数据集优于所有度量值的所有其他数据集。
    Continuous release of image databases with fully or partially identical inner categories dramatically deteriorates the production of autonomous Computer-Aided Diagnostics (CAD) systems for true comprehensive medical diagnostics. The first challenge is the frequent massive bulk release of medical image databases, which often suffer from two common drawbacks: image duplication and corruption. The many subsequent releases of the same data with the same classes or categories come with no clear evidence of success in the concatenation of those identical classes among image databases. This issue stands as a stumbling block in the path of hypothesis-based experiments for the production of a single learning model that can successfully classify all of them correctly. Removing redundant data, enhancing performance, and optimizing energy resources are among the most challenging aspects. In this article, we propose a global data aggregation scale model that incorporates six image databases selected from specific global resources. The proposed valid learner is based on training all the unique patterns within any given data release, thereby creating a unique dataset hypothetically. The Hash MD5 algorithm (MD5) generates a unique hash value for each image, making it suitable for duplication removal. The T-Distributed Stochastic Neighbor Embedding (t-SNE), with a tunable perplexity parameter, can represent data dimensions. Both the Hash MD5 and t-SNE algorithms are applied recursively, producing a balanced and uniform database containing equal samples per category: normal, pneumonia, and Coronavirus Disease of 2019 (COVID-19). We evaluated the performance of all proposed data and the new automated version using the Inception V3 pre-trained model with various evaluation metrics. The performance outcome of the proposed scale model showed more respectable results than traditional data aggregation, achieving a high accuracy of 98.48%, along with high precision, recall, and F1-score. The results have been proved through a statistical t-test, yielding t-values and p-values. It\'s important to emphasize that all t-values are undeniably significant, and the p-values provide irrefutable evidence against the null hypothesis. Furthermore, it\'s noteworthy that the Final dataset outperformed all other datasets across all metric values when diagnosing various lung infections with the same factors.
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