MACROD2

MACROD2
  • 文章类型: Journal Article
    在最近的全基因组研究和病例报告中,单ADP核糖水解酶2(MACROD2)的基因组变异与自闭症谱系障碍(ASD)相关。在这项研究中,我们旨在评估ASD患者的MACROD2表达谱.
    研究组包括100名DSM-5诊断为ASD的儿童,对照组由105名健康对照组成。从这项研究的所有参与者那里获得了血液样本,使用定量逆转录PCR(RT-qPCR)测定基因表达水平。用R3.4.0和社会科学统计程序(SPSSforWindows,21.0)。
    研究组和对照组参与者的平均年龄分别为9.22±3.62和9.27±3.86岁,分别。两组之间在性别(P=0.944)和年龄(P=0.914)方面没有显着差异。与对照组相比,研究组的MACROD2基因表达降低(研究组=5.73,对照组=89.56;倍数变化=-3.967;P<.001)。虽然MACROD2表达水平与ASD严重程度无关,它与多动/冲动症状的严重程度相关(P=.008)。
    这是研究MACROD2基因外周表达的文献中的第一项研究。我们发现,与对照组相比,ASD患者MACROD2的表达水平降低。由于MACROD2基因表达谱与ASD之间的关系还有待进一步研究,这项研究可能为进一步的研究提供见解。
    UNASSIGNED: Genomic variations in mono-ADP ribosylhydrolase 2 (MACROD2) have been associated with autism spectrum disorder (ASD) in recent genome-wide studies and case reports. In this study, we aimed to evaluate the MACROD2 expression profile in patients with ASD.
    UNASSIGNED: The study group included 100 children with a DSM-5 diagnosis of ASD, and the control group consisted of 105 healthy controls. Blood samples were obtained from all participants in this study, and the gene expression level was determined using quantitative reverse transcription PCR (RT-qPCR). Statistical analysis was performed with R 3.4.0 and Statistical Program for Social Sciences (SPSS for Windows, 21.0).
    UNASSIGNED: The mean ages of the participants in the study and control groups were 9.22 ± 3.62 and 9.27 ± 3.86 years, respectively. There was no significant difference concerning gender (P = .944) and age (P = .914) between the 2 groups. MACROD2 gene expression was found to be decreased in the study group compared to the control group (study group = 5.73, control group = 89.56; fold change =-3.967; P < .001). While the level of MACROD2 expression was not correlated with the ASD severity, it was associated with the severity of the hyperactivity/impulsivity symptoms (P = .008).
    UNASSIGNED: This is the first study in the literature investigating the peripheral expression of the MACROD2 gene. We showed that the expression level of MACROD2 was decreased in patients with ASD when compared to the control group. As the relationship between the MACROD2 gene expression profile and ASD remains to be further investigated, this study may provide an insight for further studies.
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  • 文章类型: Journal Article
    肠道菌群组成和表观遗传机制的变化已被认为在能量稳态中起重要作用。以及肥胖的发生和发展。然而,肥胖中表观遗传标记与肠道微生物组之间的串扰仍不清楚.这项研究的主要目的是通过鉴定可能受到肠道微生物群调节的差异甲基化DNA区域(DMRs),在肥胖受试者中建立肠道微生物群与DNA甲基化模式之间的联系。对BMI在18至40kg/m2之间的342名受试者进行DNA甲基化和细菌DNA测序分析。DNA甲基化分析确定了与BMI相关的总共2648个DMRs,而10个细菌属与BMI相关。有趣的是,只有Ruminococus的丰度与一个BMI相关的DMR相关,位于MACROD2/SEL1L2基因之间。Ruminococus丰度与BMI呈负相关,而高甲基化DMR与血清MACROD2蛋白水平降低相关。此外,调解试验显示,Ruminococus丰度对BMI的影响有19%是由MACROD2/SEL1L2DMR甲基化介导的.这些发现支持肠道微生物群和表观遗传标记之间的串扰可能有助于肥胖发展的假设。
    Changes in gut microbiota composition and in epigenetic mechanisms have been proposed to play important roles in energy homeostasis, and the onset and development of obesity. However, the crosstalk between epigenetic markers and the gut microbiome in obesity remains unclear. The main objective of this study was to establish a link between the gut microbiota and DNA methylation patterns in subjects with obesity by identifying differentially methylated DNA regions (DMRs) that could be potentially regulated by the gut microbiota. DNA methylation and bacterial DNA sequencing analysis were performed on 342 subjects with a BMI between 18 and 40 kg/m2. DNA methylation analyses identified a total of 2648 DMRs associated with BMI, while ten bacterial genera were associated with BMI. Interestingly, only the abundance of Ruminococcus was associated with one BMI-related DMR, which is located between the MACROD2/SEL1L2 genes. The Ruminococcus abundance negatively correlated with BMI, while the hypermethylated DMR was associated with reduced MACROD2 protein levels in serum. Additionally, the mediation test showed that 19% of the effect of Ruminococcus abundance on BMI is mediated by the methylation of the MACROD2/SEL1L2 DMR. These findings support the hypothesis that a crosstalk between gut microbiota and epigenetic markers may be contributing to obesity development.
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  • 文章类型: Journal Article
    背景:高危型HPV与宫颈癌明显相关。HPVDNA整合到宿主基因组中被认为是驱动宫颈癌发生的关键事件。然而,关于HR-HPV整合如何影响宿主基因组结构的机制仍然是个谜.
    方法:在我们的研究中,使用HPV捕获结合下一代测序的方法检测了25个DNA样本,包括11个来自新鲜冷冻的宫颈癌和14个来自新鲜冷冻的高级别鳞状上皮内病变(HSIL)。
    结果:我们计算了每个病毒基因或区域的频率,发现在宫颈癌(P=0.0004和P=5.15×10-40)和HSIL组(P=2.1×10-32和P=7.06×10-13)中,断点容易出现在L1和L2而不是E2中。结果表明,HPV16显示出向内含子区域的强烈趋势(P=5.02×10-64),但向基因间区域的趋势却很微妙(P=0.04)。最常见的整合位点是MACROD2基因(内含子2、4、5、6、8和9),在MACROD2功能域中。
    结论:我们的结果显示MACROD2是宫颈病变中HPV热点整合位点,其缺陷改变了DNA修复和对DNA损伤的敏感性,认为PARP1活性受损导致染色体不稳定。
    High-risk HPV is clearly associated with cervical cancer. Integration of HPV DNA into the host genome is considered a key event in driving cervical carcinogenesis. However, the mechanism on how HR-HPV integration influences the host genome structure has remained enigmatic.
    In our study, 25 DNA samples including 11 from fresh-frozen cervical carcinomas and 14 from fresh-frozen high-grade squamous intraepithelial lesion (HSILs) were detected using the method of HPV capture combined with next generation sequencing.
    We calculated the frequency in each viral gene or region and found that breakpoints were prone to occur in L1 and L2 instead of E2 in the cervical cancer (P = 0.0004 and P = 5.15 × 10-40) and HSIL group (P = 2.1 × 10-32 and P = 7.06 × 10-13). The results revealed that HPV16 showed a strong tendency toward intronic region (P = 5.02 × 10-64) but a subtle tendency toward intergenic region (P = 0.04). The most frequent integration site was in the MACROD2 gene (introns 2, 4, 5, 6, 8 and 9), which in MACROD2 functional domain.
    Our results revealed that MACROD2 is HPV hot spot integration site in cervical lesions, and its deficiency alter DNA repair and sensitivity to DNA damage thought impaired PARP1 activity resulting in chromosome instability.
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  • 文章类型: Journal Article
    腺苷二磷酸核糖基化(ADP-核糖基化;ADPr),在蛋白质和核酸上添加ADP-核糖部分,是一种高度保守的修饰,涉及广泛的细胞功能,从病毒防御,DNA损伤反应(DDR)新陈代谢,癌变和神经生物学。在这里,我们研究MACROD1和MACROD2(单ADP-核糖水解酶1和2),两种了解最少的ADPr-单水解酶。据报道,MACROD1主要位于线粒体,虽然MACROD2基因组位点与自闭症等各种神经系统疾病有关,注意缺陷多动障碍(ADHD)和精神分裂症;然而,在哺乳动物行为中破坏这些蛋白质的潜在意义尚不清楚。因此,在这里,我们分析了Macrod1和Macrod2基因敲除(KO)小鼠模型,自发行为测试范例。Macrod1的缺失导致女性特有的运动协调缺陷,而Macrod2破坏与多动症相关,随着年龄的增长而变得更加明显,结合运动迟缓样步态。这些数据揭示了ADPr-单水解酶在与线粒体和神经精神疾病相关的行为方面的重要性的新见解。
    Adenosine diphosphate ribosylation (ADP-ribosylation; ADPr), the addition of ADP-ribose moieties onto proteins and nucleic acids, is a highly conserved modification involved in a wide range of cellular functions, from viral defence, DNA damage response (DDR), metabolism, carcinogenesis and neurobiology. Here we study MACROD1 and MACROD2 (mono-ADP-ribosylhydrolases 1 and 2), two of the least well-understood ADPr-mono-hydrolases. MACROD1 has been reported to be largely localized to the mitochondria, while the MACROD2 genomic locus has been associated with various neurological conditions such as autism, attention deficit hyperactivity disorder (ADHD) and schizophrenia; yet the potential significance of disrupting these proteins in the context of mammalian behaviour is unknown. Therefore, here we analysed both Macrod1 and Macrod2 gene knockout (KO) mouse models in a battery of well-defined, spontaneous behavioural testing paradigms. Loss of Macrod1 resulted in a female-specific motor-coordination defect, whereas Macrod2 disruption was associated with hyperactivity that became more pronounced with age, in combination with a bradykinesia-like gait. These data reveal new insights into the importance of ADPr-mono-hydrolases in aspects of behaviour associated with both mitochondrial and neuropsychiatric disorders.
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  • 文章类型: Journal Article
    蛋白质的翻译后修饰(PTM)对于微调细胞对细胞内和细胞外信号的反应至关重要。ADP-核糖基化是一种PTM,它以两种风味发生:用多个ADP-核糖部分(聚(ADP-核糖基)或PARylation)或只有一个单元(MARylation)修饰靶标,它们由PARP家族(也称为ARTD家族)的不同酶添加。PARylation已经得到了相对充分的研究,特别是在DNA损伤反应中。这导致了PARP抑制剂如奥拉帕尼的发展,越来越多地用于癌症化疗方法。尽管大多数PARP酶催化MARylation,MARylation没有PARylation那么好理解。MARylation是一个动态过程:2013年发现了逆转酸性氨基酸(MACROD1,MACROD2和TARG1)细胞内MARylation的酶。从那以后,然而,关于它们的生理功能的信息很少。MACROD1,MACROD2和TARG1具有一个包含催化位点的“宏结构域”,但没有确定其他领域。尽管缺乏有关其细胞作用的信息,有许多研究将它们与癌症联系起来。然而,其中一些出版物相互对立,有些依赖于特征不佳的抗体,或过表达而不是天然蛋白质的异常定位。在这次审查中,我们批判性地评估了关于水解酶在癌症中的作用的现有文献,目前,关于MACROD1、MACROD2或TARG1在肿瘤发生中的作用的证据有限。
    Post-translational modifications (PTM) of proteins are crucial for fine-tuning a cell\'s response to both intracellular and extracellular cues. ADP-ribosylation is a PTM, which occurs in two flavours: modification of a target with multiple ADP-ribose moieties (poly(ADP-ribosyl)ation or PARylation) or with only one unit (MARylation), which are added by the different enzymes of the PARP family (also known as the ARTD family). PARylation has been relatively well-studied, particularly in the DNA damage response. This has resulted in the development of PARP inhibitors such as olaparib, which are increasingly employed in cancer chemotherapeutic approaches. Despite the fact that the majority of PARP enzymes catalyse MARylation, MARylation is not as well understood as PARylation. MARylation is a dynamic process: the enzymes reversing intracellular MARylation of acidic amino acids (MACROD1, MACROD2, and TARG1) were discovered in 2013. Since then, however, little information has been published about their physiological function. MACROD1, MACROD2, and TARG1 have a \'macrodomain\' harbouring the catalytic site, but no other domains have been identified. Despite the lack of information regarding their cellular roles, there are a number of studies linking them to cancer. However, some of these publications oppose each other, some rely on poorly-characterised antibodies, or on aberrant localisation of overexpressed rather than native protein. In this review, we critically assess the available literature on a role for the hydrolases in cancer and find that, currently, there is limited evidence for a role for MACROD1, MACROD2, or TARG1 in tumorigenesis.
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  • 文章类型: Journal Article
    Copy number variation (CNV) is a common structural variation pattern of DNA, and it features a higher mutation rate than single-nucleotide polymorphisms (SNPs) and affects a larger fragment of genomes. CNV is related with the genesis of complex diseases and can thus be used as a strategy to identify novel cancer-predisposing markers or mechanisms. In particular, the frequent deletions of mono-ADP-ribosylhydrolase 2 (MACROD2) locus in human colorectal cancer (CRC) alters DNA repair and the sensitivity to DNA damage and results in chromosomal instability. The relationship between CNV and cancer has not been explained. In this study, on the basis of the genome variation profiling by the SNP array from 651 CRC primary tumors, we computationally analyzed the CNV data to select crucial SNP sites with the most relevance to three different states of MACROD2 (heterozygous deletion, homozygous deletion, and normal state), suggesting that these CNVs may play functional roles in CRC tumorigenesis. Our study can shed new insights into the genesis of cancer based on CNV, providing reference for clinical diagnosis, and treatment prognosis of CRC.
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  • 文章类型: Case Reports
    手/足分裂畸形(SHFM)或外翻畸形是一种罕见的先天性疾病,以临床和遗传异质性为特征,影响肢体发育。SHFM通常作为常染色体显性性状遗传,外显率不完全。描述了孤立和综合征形式。相关畸形的程度是高度可变的,并且已经描述了具有临床和遗传重叠的多种综合征。我们在这里报道一名28岁的男子,稀疏的头发和广泛的雀斑。Array-CGH鉴定出450kb的从头20p12.1微缺失,包含MACROD2的三个外显子(外显子6至8)。尽管MACROD2突变到目前为止还没有与肢体畸形相关,它位于KIF16B旁边,参与成纤维细胞生长因子受体(FGFR)信号传导。此外,删除包含组蛋白修饰H3K27ac标记,被称为人类肢体发育过程中启动子和增强子活性定量读出的提供者。总之,这些发现表明,20p12.1CNV是SHFM的病因,在这种情况下,通过干扰调节元件的功能。
    Split hand/foot malformation (SHFM) or ectrodactyly is a rare congenital disorder affecting limb development characterized by clinical and genetic heterogeneity. SHFM is usually inherited as an autosomal dominant trait with incomplete penetrance. Isolated and syndromic forms are described. The extent of associated malformations is highly variable and multiple syndromes with clinical and genetic overlap have been described. We report here a 28 year-old man presenting with SHFM, sparse hair and widespread freckles. Array-CGH identified a 450 kb de novo 20p12.1 microdeletion encompassing three exons (exon 6 to 8) of MACROD2. Although MACROD2 mutations have not been associated with limb malformation until now, it is located next to KIF16B, which is involved in fibroblast growth factor receptor (FGFR) signaling. Additionally, the deletion encompassed a histone modification H3K27ac mark, known as a provider of quantitative readout of promoter and enhancer activity during human limb development. Altogether, these findings suggest that the 20p12.1 CNV is causative of SHFM in the present case through disturbance of regulatory elements functioning.
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  • 文章类型: Case Reports
    Diagnosing a complex genetic syndrome and correctly assigning the concomitant phenotypic traits to a well-defined clinical form is often a medical challenge. In this work, we report the analysis of a family with complex phenotypes, including microcephaly, intellectual disability, dysmorphic features, and polydactyly in the proband, with the aim of adding new aspects for obtaining a clear diagnosis. We performed array-comparative genomic hybridization and quantitative reverse transcriptase PCR (qRT-PCR) analyses. We identified a deletion of chromosome 20p12.1 involving the macrodomain containing 2/mono-ADP ribosylhydrolase 2 gene (MACROD2) in several members of the family. This gene is actually not associated with a specific syndrome but with congenital anomalies of multiple organs. qRT-PCR showed higher levels of a MACROD2 mRNA isoform in the individuals carrying the deletion. Our results, together with other data reported in the literature, support the hypothesis that the deletion in MACROD2 can affect correct embryonic development and that the presence of another associated event, such as epigenetic modifications at the MACROD2 locus, can influence the level of severity of the pathology.
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  • 文章类型: Journal Article
    ADP-ribosylation is an important post-translational protein modification that regulates diverse biological processes, controlled by dedicated transferases, and hydrolases. Disruption in the gene encoding for MACROD2, a mono-ADP-ribosylhydrolase, has been associated to the Kabuki syndrome, a pediatric congenital disorder characterized by facial anomalies, and mental retardation. Non-coding and structural mutations/variations in MACROD2 have been associated to psychiatric disorders, to obesity, and to cancer. Mechanistically, it has been recently shown that frequent deletions of the MACROD2 alter DNA repair and sensitivity to DNA damage, resulting in chromosome instability, and colorectal tumorigenesis. Whether MACROD2 deletion sensitizes the organism to metabolic and tumorigenic stressors, in absence of other genetic drivers, is unclear. As MACROD2 is ubiquitously expressed in mice, here we generated constitutively whole-body knock-out mice for MACROD2, starting from mouse embryonic stem (ES) cells deleted for the gene using the VelociGene® technology, belonging to the Knockout Mouse Project (KOMP) repository, a NIH initiative. MACROD2 knock-out mice were viable and healthy, indistinguishable from wild type littermates. High-fat diet administration induced obesity, and glucose/insulin intolerance in mice independent of MACROD2 gene deletion. Moreover, sub-lethal irradiation did not indicate a survival or lethality bias in MACROD2 knock-out mice compared to wild type littermates. Altogether, our data point against a sufficient role of MACROD2 deletion in aggravating high-fat induced obesity and DNA damage-associated lethality, in absence of other genetic drivers.
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  • 文章类型: Editorial
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