LAMA2

LAMA2
  • 文章类型: Journal Article
    LAMA2相关性肌营养不良症(LAMA2-RD)是一种常染色体隐性遗传疾病,是最常见的先天性肌营养不良症之一。由于临床前开发中有希望的疗法,人们越来越努力更好地定义这种疾病的流行病学和自然史。
    本研究旨在描述瑞士LAMA2-RD患者的特征良好的基线队列。
    该研究使用了瑞士神经肌肉疾病登记处(Swiss-Reg-NMD)收集的数据。诊断结果来自遗传学,肌肉活检,肌酸激酶水平和电生理测试,以及大脑核磁共振成像。进一步的临床信息包括运动评估(CHOPINTEND,MFM20/32),关节挛缩,脊柱侧弯,眼肌麻痹,体重增加,喂养困难,呼吸功能,心脏检查,脑电图发现,智商和学校教育。
    截至2023年5月,18名LAMA-RD患者被纳入Swiss-Reg-NMD(纳入注册表的年龄:中位年龄8.7岁,范围1个月-31年F=8,M=10)。14例患者出现严重形式的LAMA2-RD(从未能够行走;CMD),而四名患者表现为较温和的形式(存在或丧失行走能力;LGMD)。所有被分类为CMD的患者在12个月之前有症状,在6个月之前有11/14症状。15个在LAMA2中携带纯合或复合杂合致病性或可能的致病性变体,两个是纯合的,具有未知意义的变体(一名患者未知)。14例患者可进行脑部MRI检查,13有白质变化,11有额外的结构异常,包括鹅卵石畸形,脑桥发育不全和前未报道的扩大的被膜-阴茎角。
    这项研究描述了瑞士LAMA2-RD患者队列,并提供了测量疾病严重程度和疾病进展的见解。这对未来的临床试验很重要,以及更好地了解和管理LAMA2-RD患者。
    UNASSIGNED: LAMA2-related muscular dystrophy (LAMA2-RD) is an autosomal-recessive disorder and one of the most common congenital muscular dystrophies. Due to promising therapies in preclinical development, there is an increasing effort to better define the epidemiology and natural history of this disease.
    UNASSIGNED: The present study aimed to describe a well-characterized baseline cohort of patients with LAMA2-RD in Switzerland.
    UNASSIGNED: The study used data collected by the Swiss Registry for Neuromuscular Disorders (Swiss-Reg-NMD). Diagnostic findings were derived from genetics, muscle biopsy, creatine kinase-level and electrophysiological testing, as well as from brain MRIs. Further clinical information included motor assessments (CHOP INTEND, MFM20/32), joint contractures, scoliosis, ophthalmoplegia, weight gain, feeding difficulties, respiratory function, cardiac investigations, EEG findings, IQ and schooling.
    UNASSIGNED: Eighteen patients with LAMA-RD were included in the Swiss-Reg-NMD as of May 2023 (age at inclusion into the registry: median age 8.7 years, range 1 month - 31 years F = 8, M = 10). Fourteen patients presented with the severe form of LAMA2-RD (were never able to walk; CMD), whereas four patients presented with the milder form (present or lost walking capability; LGMD). All patients classified as CMD had symptoms before 12 months of age and 11/14 before the age of six months. 15 carried homozygous or compound heterozygous pathogenic or likely pathogenic variants in LAMA2 and two were homozygous for a variant of unknown significance (one patient unknown). Brain MRI was available for 14 patients, 13 had white matter changes and 11 had additional structural abnormalities, including cobblestone malformations, pontine hypoplasia and an enlarged tegmento-vermial angle not reported before.
    UNASSIGNED: This study describes the Swiss cohort of patients with LAMA2-RD and gives insights into measuring disease severity and disease progression, which is important for future clinical trials, as well as for a better clinical understanding and management of patients with LAMA2-RD.
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  • 文章类型: Journal Article
    LAMA2相关的营养不良(LAMA2-RD)代表了先天性肌营养不良的最常见形式之一,并且在历史上被分为两种亚型:层粘连蛋白-211(丝裂素)完全或部分缺乏。具有典型先天性表型的LAMA2-RD患者表现出严重的肌无力,延迟电机里程碑,关节挛缩,未能茁壮成长,和进行性呼吸功能不全。
    虽然对5岁以上的LAMA2-RD患者进行了全面的前瞻性自然史研究,5岁以下LAMA2-RD患者的早期自然史尚未得到全面表征.
    我们通过先天性肌肉疾病国际注册(CMDIR)提取了5岁出生的LAMA2-RD患者的回顾性数据。我们使用基于最大运动里程碑的表型分类对数据进行了分析,将患者分为两个表型组:“Sit”用于那些获得保持坐姿能力的患者,“Walk”用于那些在3.5岁时获得独立行走能力的患者。
    来自10个国家的60例LAMA2-RD患者符合纳入标准。24名患者在5岁时开始了无创通气。生命最初几年的住院通常与呼吸功能不全有关。通常报道喂养/营养困难和骨科问题。在新生儿期观察到的肌酸激酶(CK)的显着升高在生命的最初几个月内迅速下降。
    这是迄今为止国际上最大的LAMA2-RD早期自然史回顾性研究,为了解LAMA2-RD的早期临床发现提供必要的数据,随着国际上收集的数据,前瞻性早期自然史研究,将有助于建立临床试验准备。我们提出的LAMA2-RD1命名为具有坐着能力(保持坐着)的患者,LAMA2-RD2命名为具有独立行走能力的患者,旨在进一步改善LAMA2-RD分类。
    UNASSIGNED: LAMA2-related dystrophies (LAMA2-RDs) represent one of the most common forms of congenital muscular dystrophy and have historically been classified into two subtypes: complete or partial deficiency of laminin-211 (merosin). Patients with LAMA2-RD with the typical congenital phenotype manifest severe muscle weakness, delayed motor milestones, joint contractures, failure to thrive, and progressive respiratory insufficiency.
    UNASSIGNED: While a comprehensive prospective natural history study has been performed in LAMA2-RD patients over 5 years of age, the early natural history of patients with LAMA2-RD 5 years and younger has not been comprehensively characterized.
    UNASSIGNED: We extracted retrospective data for patients with LAMA2-RD ages birth through 5 years via the Congenital Muscle Disease International Registry (CMDIR). We analyzed the data using a phenotypic classification based on maximal motor milestones to divide patients into two phenotypic groups: \"Sit\" for those patients who attained that ability to remain seated and \"Walk\" for those patients who attained the ability to walk independently by 3.5 years of age.
    UNASSIGNED: Sixty patients with LAMA2-RD from 10 countries fulfilled the inclusion criteria. Twenty-four patients had initiated non-invasive ventilation by age 5 years. Hospitalizations during the first years of life were often related to respiratory insufficiency. Feeding/nutritional difficulties and orthopedic issues were commonly reported. Significant elevations of creatine kinase (CK) observed during the neonatal period declined rapidly within the first few months of life.
    UNASSIGNED: This is the largest international retrospective early natural history study of LAMA2-RD to date, contributing essential data for understanding early clinical findings in LAMA2-RD which, along with the data being collected in international, prospective early natural history studies, will help to establish clinical trial readiness. Our proposed nomenclature of LAMA2-RD1 for patients who attain the ability to sit (remain seated) and LAMA2-RD2 for patients who attain the ability to walk independently is aimed at further improving LAMA2-RD classification.
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  • 文章类型: Case Reports
    层粘连蛋白基因(LAMA2)的α-2亚基中的突变会导致常染色体隐性遗传性先天性肌营养不良(CMD)亚型,称为层粘连蛋白a2相关性肌营养不良(LAMA2-RD)。LAMA2-RD可以表现出广泛的表型,从严重的婴儿先天性肌营养不良到较温和的成人发作的肢带肌营养不良。这个病例描述了一名28岁的印度绅士患有童年发作的局灶性癫痫,在过去的三年中,逐渐进行性近端主要下肢无力,肌酐磷酸激酶水平升高,脑MRI提示弥漫性对称脑室周围白质高信号。整个外显子组测序揭示了6号染色体上LAMA2基因外显子4中罕见的纯合错义变异(c.442C>T[p。Arg148Trp]).成年发病的肢体带型肌营养不良伴白质影像学异常,高CK血症,癫痫发作应引起对LAMA2-RD的怀疑。该病例产生了一种超罕见的基因突变,该突变以前从未在南亚种族的个体中报道过,导致LAMA2-RD。需要报告更多来自不同种族的晚发性LAMA2-RD病例,以扩大我们对该疾病临床遗传谱的理解。
    Mutations in the alpha-2 subunits of the laminin gene (LAMA2) cause an autosomal recessive congenital muscular dystrophy (CMD) subtype known as laminin a2-related muscular dystrophies (LAMA2-RD). LAMA2-RD can present with a wide range of phenotypes ranging from severe infantile congenital muscular dystrophy to milder adult-onset limb-girdle muscular dystrophy. This case describes a 28-year-old Indian gentleman having childhood-onset focal seizures, gradually progressive proximal predominant lower-limb weakness for the past three years, elevated creatinine phosphokinase levels, and MRI brain suggestive of diffuse symmetrical periventricular white matter hyperintensities. The whole exome sequencing revealed a rare homozygous missense variant in exon 4 of the LAMA2 gene on chromosome 6 (c.442C>T[p.Arg148Trp]). Adult-onset limb-girdle muscular dystrophy with white matter imaging abnormalities, hyperCKemia, and seizures should evoke suspicion of LAMA2-RD. This case brings forth an ultra-rare genetic mutation that has not been previously reported in individuals of South Asian ethnicity leading to LAMA2-RD. More cases of late-onset LAMA2-RD from various ethnicities need to be reported to expand our understanding of the clinical-genetic spectrum of the disease.
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  • 文章类型: Journal Article
    LAMA2相关的先天性肌营养不良(LAMA2-CMD),以层粘连蛋白-α2缺乏为特征,使人衰弱,最终致命。迄今为止,临床上没有有效的治疗方法.层粘连蛋白-α1与层粘连蛋白-α2具有显着的相似性,已被证明是可行的补偿性修饰剂。为了评估其临床适用性,建立Lama2外显子-3缺失小鼠模型(dyH/dyH)。dyH/dyH小鼠表现出早期致死性和典型的LAMA2-CMD表型,允许评估各种端点。在用基于协同激活介质(SAM)的CRISPRa介导的Lama1上调治疗的dyH/dyH小鼠中(总剂量:1.0×1011载体基因组/小鼠),观察到中位生存期几乎翻了一番,以及重量和抓地力的改善。MRI也证明了显著的治疗效果,血清生化指标,和肌肉病理学研究。我们表明,用LAMA1上调治疗LAMA2-CMD是可行的,早期干预可以减轻症状并延长寿命。此外,我们揭示了LAMA1上调的局限性,包括高剂量死亡率和非持续表达,这需要在未来的研究中进一步优化。
    LAMA2-related congenital muscular dystrophy (LAMA2-CMD), characterized by laminin-α2 deficiency, is debilitating and ultimately fatal. To date, no effective therapy has been clinically available. Laminin-α1, which shares significant similarities with laminin-α2, has been proven as a viable compensatory modifier. To evaluate its clinical applicability, we establish a Lama2 exon-3 deletion mouse model (dyH/dyH). The dyH/dyH mice exhibit early lethality and typical LAMA2-CMD phenotypes, allowing the evaluation of various endpoints. In dyH/dyH mice treated with synergistic activation mediator-based CRISPRa-mediated Lama1 upregulation, a nearly doubled median survival is observed, as well as improvements in weight and grip. Significant therapeutical effects are revealed by MRI, serum biochemical indices, and muscle pathology studies. Treating LAMA2-CMD with LAMA1 upregulation is feasible and that early intervention can alleviate symptoms and extend lifespan. Additionally, we reveal limitations of LAMA1 upregulation, including high-dose mortality and non-sustained expression, which require further optimization in future studies.
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  • 文章类型: Case Reports
    背景:我们报道了一例罕见的新生儿肌酸激酶(CK)水平升高的原发性临床表现,与LAMA2基因相关。在这种情况下,LAMA2基因外显子5的杂合突变,c.715C>G(导致编码区的核苷酸数715从胞嘧啶变为鸟嘌呤),诱导氨基酸改变p.R239G(编号239)在患者中,代表一个错义突变。这一观察结果可以通过新生儿肌酸监测机制来阐明,以前没有报道过的现象。
    方法:我们分析了一例仅表现为CK水平升高的新生儿,经支持治疗后最终出院。主要投诉是确定15d的CK水平升高和1d的CK值升高。入院发生在18d年龄,尽管长期使用肌酸和维生素C治疗,升高的CK水平显示出有限的改善。全外显子组测序显示新生儿LAMA2中存在c.715C>G突变,与临床表型相关。然而,现有信息提供的临床致病性证据不足.
    结论:LAMA2突变与新生儿CK水平升高的临床表型相关,没有具体的治疗方法。全基因组测序有助于早期诊断。
    BACKGROUND: We report a rare case of primary clinical presentation featuring elevated creatine kinase (CK) levels in a neonate, which is associated with the LAMA2 gene. In this case, a heterozygous mutation in exon5 of the LAMA2 gene, c.715C>G (resulting in a change of nucleotide number 715 in the coding region from cytosine to guanine), induced an amino acid alteration p.R239G (No. 239) in the patient, representing a missense mutation. This observation may be elucidated by the neonatal creatine monitoring mechanism, a phenomenon not previously reported.
    METHODS: We analysed the case of a neonate presenting solely with elevated CK levels who was eventually discharged after supportive treatment. The chief complaint was identification of increased CK levels for 15 d and higher CK values for 1 d. Admission occurred at 18 d of age, and despite prolonged treatment with creatine and vitamin C, the elevated CK levels showed limited improvement. Whole exome sequencing revealed the presence of a c.715C>G mutation in LAMA2 in the newborn, correlating with a clinical phenotype. However, the available information offers insufficient evidence for clinical pathogenicity.
    CONCLUSIONS: Mutations in LAMA2 are associated with the clinical phenotype of increased neonatal CK levels, for which no specific treatment exists. Whole genome sequencing facilitates early diagnosis.
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  • 文章类型: Journal Article
    抑郁症是一种遗传性脑疾病。最近发现层粘连蛋白基因通过神经发生影响大脑的整体厚度,分化,抑郁症中的迁移。本研究旨在探讨LAMA2的单核苷酸多态性(SNP)的影响,层粘连蛋白的一个亚单位基因,在检测到的重度抑郁障碍(MDD)患者的大脑区域上。
    该研究包括89名MDD患者和60名健康对照者,他们使用T1加权结构磁共振成像和血液样本进行基因分型。LAMA2基因SNP与诊断之间的相互作用以及疾病持续时间(DOI)在控制年龄的大脑测量中进行了探索,性别,和网站。
    右侧颞横回和右侧海马旁回显示MDD厚度减小。几乎所有的7个LAMA2SNP都显示出与两个回的诊断的显著相互作用(校正的p<0.05或趋势)。在MDD中,rs6569604,rs2229848,rs2229849,rs2229850和rs2784895与右颞横回的DOI相互作用(校正p<0.05),但不是右侧海马旁回.
    MDD患者右侧颞横回的厚度可能受LAMA2基因和DOI的影响。
    UNASSIGNED: Depression is a heritable brain disorder. Laminin genes were recently identified to affect the brain\'s overall thickness through neurogenesis, differentiation, and migration in depression. This study aims to explore the effects of the LAMA2\'s single nucleotide polymorphisms (SNP), a subunit gene of laminin, on the detected brain regions of patients with major depressive disorder (MDD).
    UNASSIGNED: The study included 89 patients with MDD and 60 healthy controls with T1-weighted structural magnetic resonance imaging and blood samples for genotyping. The interactions between LAMA2 gene SNPs and diagnosis as well as duration of illness (DOI) were explored on brain measures controlled for age, gender, and site.
    UNASSIGNED: The right transverse temporal gyrus and right parahippocampal gyrus showed reduced thickness in MDD. Almost all seven LAMA2 SNPs showed significant interactions with diagnosis on both gyrus (corrected p < 0.05 or trending). In MDD, rs6569604, rs2229848, rs2229849, rs2229850, and rs2784895 interacted with DOI on the right transverse temporal gyrus (corrected p < 0.05), but not the right parahippocampal gyrus.
    UNASSIGNED: The thickness of the right transverse temporal gyrus in patients with MDD may be affected by LAMA2 gene and DOI.
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  • 文章类型: Journal Article
    产牛后90天以上没有发情期(PPAI),这是一个值得关注的问题。PPAI持续时间受管理实践和动物遗传学的影响。研究与PPAI相关的遗传标记对于将它们纳入标记辅助选择程序至关重要。为了这个目标,我们的研究重点是探索产后早期脂肪组织基因网络中潜在的遗传标记.我们成功地鉴定了9个候选基因内的24个单核苷酸多态性(SNP)。在我们对100只水牛的初步分析中,我们检测到Lama2基因中特定同义SNP(g.36417726C>A)与PPAI之间存在显著关联(P=0.02267).这一发现随后在415只水牛的更大队列中得到了验证(P=0.02937),其中SNP解释了1.36%的遗传变异。有趣的是,与具有AA和CA基因型的水牛相比,具有该SNP的CC基因型的水牛表现出的PPAI延长了12.71±3.21天。为了深入了解这个SNP的功能相关性,计算分析表明,与A等位基因相比,SNP的C等位基因(g.36417726C>A)导致LAMA2mRNA的稳定性增加。通过观察CC基因型(48.78±1.87%)与AA基因型(33.59±4.5%)相比,Lama2基因表达(大于8倍)的显著增加(P=0.01798)和脂肪组织中更高的脂肪百分比(P<0.05),证实了该计算预测。此外,我们注意到C/ebpβ显著上调(P<0.05),pparγ,Fasn,C/ebpα,和Pnpla2基因,与AA基因型相反,CC基因型中Bmp2和Ptch1的下调。此观察结果表明,Pparγ介导的途径参与CC基因型的脂肪生成和脂解。总之,我们涉及关联和功能验证的综合分析强调了Lama2基因中SNP(g.36417726C>A)作为针对Murrah水牛扩展PPAI的有希望的遗传标记的潜力.
    Postpartum absence of estrus exhibition known as postpartum anestrus interval (PPAI) for more than 90 days after calving is a concerning issue for dairy buffalo farmers\' economy. The PPAI duration is influenced by both management practices and animal genetics. Investigating genetic markers associated with PPAI is crucial for incorporating them into marker-assisted selection programs. Towards this goal, our study focused on exploring potential genetic markers from early postpartum adipose tissue gene networks. We successfully identified 24 Single Nucleotide Polymorphisms (SNPs) within 9 candidate genes. In our initial analysis involving 100 buffaloes, we detected a significant association (P = 0.02267) between a specific synonymous SNP within the Lama2 gene (g.36417726C > A) and PPAI. This finding was subsequently validated (P = 0.02937) in a larger cohort of 415 buffaloes, where the SNP explained 1.36 % of the genetic variance. Intriguingly, buffaloes with the CC genotype of this SNP exhibited a PPAI that was 12.71 ± 3.21 days longer compared to buffaloes with AA and CA genotypes. To gain insight into the functional relevance of this SNP, a computational analysis was performed which indicated that the C allele of the SNP (g.36417726C > A) increased the stability of LAMA2 mRNA compared to the A allele. This computational prediction was corroborated by observing a significant increase (P = 0.01798) in Lama2 gene expression (greater than 8-fold) and higher fat percentage (P < 0.05) in adipose tissue of CC genotypes (48.78 ± 1.87 %) compared to AA genotypes (33.59 ± 4.5 %). Furthermore, we noted a significant (P < 0.05) upregulation of C/ebpβ, Pparγ, Fasn, C/ebpα, and Pnpla2 genes, along with the downregulation of Bmp2 and Ptch1 in CC genotypes as opposed to AA genotypes. This observation suggests the involvement of the Pparγ-mediated pathway in both adipogenesis and lipolysis within CC genotypes. In summary, our comprehensive analysis involving association and functional validation underscores the potential of the SNP (g.36417726C > A) within the Lama2 gene as a promising genetic marker against extended PPAI in Murrah buffalo.
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  • 文章类型: Journal Article
    目的:Merosin是一种蛋白质复合物,位于骨骼肌的基底膜以及中枢和周围神经系统的层粘连蛋白α2-含区。然而,因为肌肉相关症状的突出,与美罗素缺乏型先天性肌营养不良1A型(MDC1A)相关的周围神经病变很少受到临床关注.本研究旨在介绍3例MDC1A患者的肌内神经病理变化,并探讨其与电生理表现的关系,为MDC1A参与周围神经提供新的证据。
    方法:MDC1A经临床特征证实,肌肉活检,以及LAMA2变异基因检测.为了阐明周围神经受累,我们统计评估了肌内神经的电生理和肌肉病理结果。将这些发现与年龄匹配的Duchenne肌营养不良(DMD)男孩作为正常神经的对照进行比较。活检前进行神经传导研究(NCS)。用电子显微镜使用g-ratio检查活检肌内神经,轴突直径与有髓纤维直径之比。
    结果:与年龄匹配的DMD患者相比,MDC1A患者的髓鞘明显变薄,MDC1A患者的平均g比为0.76±0.07,DMD患者为0.65±0.14(p<0.0001)。在肌肉病理学中未发现神经病变。低复合肌肉动作电位振幅,正的尖锐波和纤颤电位,低振幅运动单位电位伴息肉增多提示肌病性改变;未见神经性改变。
    结论:我们假设与MDC1A相关的薄髓磷脂反映了丝裂素在髓磷脂成熟中的作用。
    OBJECTIVE: Merosin is a protein complex located in the basement membrane of skeletal muscles and laminin α2-containing regions of the central and peripheral nervous systems. However, because of the prominence of muscle-related symptoms, peripheral neuropathy associated with merosin-deficient congenital muscular dystrophy type 1A (MDC1A) has received little clinical attention. This study aimed to present pathological changes in intramuscular nerves of three patients with MDC1A and discuss their relationship with electrophysiological findings to provide new evidence of peripheral nerve involvement in MDC1A.
    METHODS: MDC1A was confirmed by clinical features, muscle biopsy, and genetic testing for variants in LAMA2. To clarify peripheral nerve involvement, we statistically evaluated electrophysiological and muscle pathology findings of intramuscular nerves. These findings were compared with those of age-matched boys with Duchenne muscular dystrophy (DMD) as controls with normal nerves. Nerve conduction studies (NCS) were performed before biopsy. Biopsied intramuscular nerves were examined with electron microscopy using g-ratio, which is the ratio of axon diameter to myelinated fiber diameter.
    RESULTS: The myelin sheaths were significantly thinner in MDC1A patients than in age-matched DMD patients, with a mean g-ratio of 0.76 ± 0.07 in MDC1A patients and 0.65 ± 0.14 in DMD patients (p < .0001). No neuropathic changes were identified in muscle pathology. Low compound muscle action potential amplitudes, positive sharp waves and fibrillation potentials, and low-amplitude motor unit potentials with increased polyphasia indicated myopathic changes; no neurogenic changes were seen.
    CONCLUSIONS: We postulate that the thin myelin associated with MDC1A reflects the role of merosin in myelin maturation.
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  • 文章类型: Journal Article
    背景:膀胱尿路上皮癌(BLCA)是最常见的泌尿生殖系统癌,患者预后通常较差。然而,BLCA中基底膜相关基因(BM相关基因)的研究报道较少。因此,我们建立了一个BM相关基因签名,以探讨其在BLCA中的功能和预后价值.
    方法:在本研究中,通过LASSO-Cox回归分析构建BM相关基因签名,然后使用一系列生物信息学方法来评估签名的准确性和有效性。我们构建了临床应用的列线图,并筛选了可能的治疗药物。探讨BLCA中BM相关基因的功能和通路,我们进行了功能富集分析.此外,我们分析了高危和低危人群的免疫细胞浸润情况和免疫检查点相关基因.最后,我们在体外证实了BM相关基因在BLCA中的预后价值。
    结果:结合多种生物信息学方法,我们发现了一个七基因签名.测试队列证实了该特征在预测BLCA患者中的准确性和有效性。此外,风险评分与预后密切相关,免疫检查点基因,药物敏感性,和免疫细胞渗透景观。风险评分是BLCA患者的独立预后因素。进一步的实验表明,所有七个标记基因在BLCA细胞系和正常膀胱细胞之间差异表达。最后,LAMA2的过表达抑制了BLCA细胞系的迁移和侵袭能力。
    结论:总之,BM相关基因标记能够准确预测BLCA患者的预后,提示BM相关基因在BLCA的诊断和治疗中具有重要的临床价值。此外,LAMA2可能是一个潜在的治疗靶点,这为BM相关基因在BLCA患者中的应用提供了新的见解。
    BACKGROUND: Bladder urothelial carcinoma (BLCA) is the most common genitourinary cancer and the prognosis of patients is often poor. However, studies of basement membrane-related genes (BM-related genes) in BLCA are less reported. Therefore, we established a BM-related genes signature to explore their functional and prognostic value in BLCA.
    METHODS: In this study, a BM-related genes signature was constructed by LASSO-Cox regression analysis, and then a series of bioinformatics methods was used to assess the accuracy and validity of the signature. We constructed a nomogram for clinical application and also screened for possible therapeutic drugs. To investigate the functions and pathways affected by BM-related genes in BLCA, we performed functional enrichment analyses. In addition, we analyzed the immune cell infiltration landscape and immune checkpoint-related genes in the high and low-risk groups. Finally, we confirmed the prognostic value of BM-related genes in BLCA in vitro.
    RESULTS: Combining multiple bioinformatics approaches, we identified a seven-gene signature. The accuracy and validity of this signature in predicting BLCA patients were confirmed by the test cohort. In addition, the risk score was strongly correlated with prognosis, immune checkpoint genes, drug sensitivity, and immune cell infiltration landscape. The risk score is an independent prognostic factor for BLCA patients. Further experiments revealed that all seven signature genes were differentially expressed between BLCA cell lines and normal bladder cells. Finally, overexpression of LAMA2 inhibited the migration and invasion ability of BLCA cell lines.
    CONCLUSIONS: In summary, the BM-related genes signature was able to predict the prognosis of BLCA patients accurately, indicating that the BM-related genes possess great clinical value in the diagnosis and treatment of BLCA. Moreover, LAMA2 could be a potential therapeutic target, which provides new insights into the application of the BM-related genes in BLCA patients.
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  • 文章类型: Journal Article
    LAMA2基因突变与先天性肌营养不良(CMD)有关。与LAMA2相关的CMD主要由两种疾病组成,美罗素缺乏型先天性肌营养不良1A型(MDC1A)和四肢带型肌营养不良23(LGMD23)。LGMD23的特点是缓慢进展的近端肌无力,主要影响下肢并导致步态困难。其他临床特征包括血清肌酸激酶增加,脑成像上有或没有白质异常的肌电图异常。
    临床数据来自中国汉族家庭。全外显子组测序,桑格测序,对家族成员进行RT-PCR和TA克隆测序。
    LAMA2的复合杂合突变:c.1693C>T(p。在先证中鉴定并确认了Q565*)(母系遗传)和c.9212-6T>G(父系遗传)。突变c.1693C>T(p。Q565*)根据美国医学遗传学和基因组学学院(ACMG)指南被归类为致病性。通过进行RT-PCR和TA克隆测序,在先证者和她父亲的转录本中发现了40bp内含子序列(内含子64)的插入,这导致LAMA2的移码和过早截断密码子。特别是,该变体截短了LAMA2的LamG结构域。因此,根据美国医学遗传学和基因组学学院(ACMG)指南,c.9212-6T>G被分类为可能致病的.
    我们的发现描述了一个LGMDR23女孩的两个新突变,这有助于家庭的遗传咨询,并扩大了这种罕见疾病的临床和分子谱。
    UNASSIGNED: Mutations of LAMA2 gene are associated with congenital muscular dystrophy (CMD). The LAMA2-related CMD mainly consists of two diseases, merosin deficient congenital muscular dystrophies type 1A (MDC1A) and limb girdle muscular dystrophy 23 (LGMD23). LGMD23 is characterized by slowly progressive proximal muscle weakness, which primarily affects the lower limbs and results in gait difficulties. Additional clinical features include increased serum creatine kinase, abnormal electromyography with or without white matter abnormalities on brain imaging.
    UNASSIGNED: Clinical data were collected from a Chinese Han family. Whole-exome sequencing, Sanger sequencing, RT-PCR and TA clone sequencing were performed on the family members.
    UNASSIGNED: Compound heterozygous mutations of LAMA2: c.1693C > T (p. Q565*) (maternally inherited) and c.9212-6T > G (paternally inherited) were identified and confirmed in the proband. The mutation c.1693C > T (p. Q565*) was classified as pathogenic according to American College of Medical Genetics and Genomics (ACMG) guidelines. By performing RT-PCR and TA clone sequencing, an insertion of 40-bp intronic sequence (intron 64) was found in the transcripts of the proband and her father, which resulted in a frameshift and premature truncation codon of the LAMA2. In particular, the variant truncated the LamG domain of the LAMA2. Therefore, the c.9212-6T>G was classified as likely pathogenic according to American College of Medical Genetics and Genomics (ACMG) guidelines.
    UNASSIGNED: Our findings described two novel mutations in a girl with LGMDR23, which contributes to the genetic counseling of the family and expands the clinical and molecular spectrums of the rare disease.
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