Klebsiella grimontii

克雷伯氏菌
  • 文章类型: Journal Article
    grimontii克雷伯菌是产酸克雷伯菌复合体中的一种新发现的物种。这里,我们提供了三个K.grimontii菌株的基因组序列草案,这些菌株是从一项纵向研究的参与者收集的导管尿液样本中分离出来的。
    Klebsiella grimontii is a newly identified species within the Klebsiella oxytoca complex. Here, we present the draft genome sequence of three K. grimontii strains that were isolated from catheterized urine samples collected from a participant in a longitudinal study over ~6 months.
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  • 文章类型: Journal Article
    魔芋葡甘露聚糖(KGM)是一种来源于魔芋的天然多糖,由于其众多的有益性能,已广泛应用于各个领域。然而,KGM的高粘度和吸水性限制了其应用。与KGM相比,魔芋葡甘露聚糖寡糖(KGMOS)具有较高的水溶性和较强的应用价值。在本文中,从克雷伯菌grimontii中克隆了一种新的甘露聚糖酶KgManA,以开发一种新的KGMOS产生酶。生物信息学分析表明,KgManA与其他酶的结构相似性小于18.33%。系统发育分析表明,KgManA与含有CMB35结构域的传统甘露聚糖酶共享不同的分支,表明它是一种新型的甘露聚糖酶.然后,测定酶学性质并表征底物特异性。令人惊讶的是,KgManA在3.0至10.0的非常宽的pH范围内稳定;它具有特殊的底物特异性,似乎仅对侧链中没有半乳糖的甘露聚糖具有活性。此外,模拟了酶的三维结构,并进行了甘露糖底物的分子对接。据我们所知,这是第一份表征酶学性质和模拟来自K.grimontii的甘露聚糖酶结构的报告。这项工作将有助于新型K.grimontii衍生的甘露聚糖酶的开发和表征。上述结果表明KgManA是生产KGMOS的有前途的工具。
    Konjac glucomannan (KGM) is a natural polysaccharide derived from konjac, which has been widely used in various fields due to its numerous beneficial properties. However, the high viscosity and water absorption of KGM limit its application. Compared with KGM, Konjac glucomannan oligosaccharides (KGMOS) have higher water solubility and stronger application value. In this paper, a novel mannanase KgManA was cloned from Klebsiella grimontii to develop a new KGMOS-producing enzyme. Bioinformatic analysis shows that the structural similarity between KgManA and other enzymes was less than 18.33%. Phylogenetic analysis shows that KgManA shares different branches with the traditional mannanases containing the CMB35 domain, indicating that it is a novel mannanase. Then, the enzymatic properties were determined and substrate specificity was characterized. Surprisingly, KgManA is stable in a very wide pH range of 3.0 to 10.0; it has a special substrate specificity and seems to be active only for mannans without galactose in the side chain. Additionally, the three-dimensional structure of the enzyme was simulated and molecular docking of the mannotetraose substrate was performed. As far as we know, this is the first report to characterize the enzymatic properties and to simulate the structure of mannanase from K. grimontii. This work will contribute to the development and characterization of novel K. grimontii-derived mannanases. The above results indicate that KgManA is a promising tool for the production of KGMOS.
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  • 文章类型: Journal Article
    造纸工业中产生的废水,比如黑酒,木质素和其他有毒成分含量较高;然而,它们代表了具有生物技术潜力的木质素降解细菌的来源。因此,本研究旨在分离和鉴定造纸厂污泥中木质素降解菌。从位于阿斯波省(秘鲁)的一家造纸公司周围环境中存在的污泥样品中进行了初步分离。通过在固体培养基中降解作为唯一碳源的木质素牛皮纸来进行细菌选择。最后,通过氧化2,2\'-氮杂双-(3-乙硫烯烯唑啉-6-磺酸盐)(ABTS)测定每种选定细菌的漆酶活性(Um-L-1)。通过分子生物学技术鉴定了具有漆酶活性的细菌种类。鉴定出7种具有漆酶活性和降解木质素能力的细菌。根癌农杆菌(2),克雷伯氏菌(1),首次报道了黄菊(1)。K.grimowntii和B.fluminensis表现出最高的漆酶活性,值分别为0.319±0.005UmL-1和0.329±0.004UmL-1。总之,造纸厂污泥可能是具有漆酶活性的木质素降解细菌的来源,它们可能有潜在的生物技术应用。
    The effluents generated in the paper industry, such as black liquor, have a high content of lignin and other toxic components; however, they represent a source of lignin-degrading bacteria with biotechnological potential. Therefore, the present study aimed to isolate and identify lignin-degrading bacteria species in paper mill sludge. A primary isolation was carried out from samples of sludge present in environments around a paper company located in the province of Ascope (Peru). Bacteria selection was made by the degradation of Lignin Kraft as the only carbon source in a solid medium. Finally, the laccase activity (Um-L-1) of each selected bacteria was determined by oxidation of 2,2\'-azinobis-(3-etilbencenotiazolina-6-sulfonate) (ABTS). Bacterial species with laccase activity were identified by molecular biology techniques. Seven species of bacteria with laccase activity and the ability to degrade lignin were identified. The bacteria Agrobacterium tumefasciens (2), Klebsiella grimontii (1), and Beijeinckia fluminensis (1) were reported for first time. K. grimowntii and B. fluminensis presented the highest laccase activity, with values of 0.319 ± 0.005 UmL-1 and 0.329 ± 0.004 UmL-1, respectively. In conclusion, paper mill sludge may represent a source of lignin-degrading bacteria with laccase activity, and they could have potential biotechnological applications.
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  • 文章类型: Journal Article
    Klebsiella grimontii is a newly identified species closely related to Klebsiella oxytoca, but carbapenem resistance was not identified in the species before. We found a carbapenem-resistant K. oxytoca-like clinical strain, WCHKG020121. The strain was subjected to whole genome sequencing using Illumina HiSeq X10. The precise species identification was established based on average nucleotide identity (ANI) and in silico DNA-DNA hybridization (isDDH) between strain WCHKG020121 and type strains of Klebsiella species. Antimicrobial resistance genes were identified from the genome sequence. The sequence of the bla KPC-2-carrying plasmid was completed using PCR and Sanger sequencing. Conjugation experiments were performed to obtain the plasmid carrying bla KPC-2. All K. grimontii genomes were retrieved from GenBank and were analyzed for antimicrobial resistance genes. Strain WCHKG020121 was resistant to imipenem and meropenem (MIC for both, 32 μg/ml) but was susceptible to colistin (1 μg/ml). Strain WCHKG020121 was initially identified as K. oxytoca using Vitek II but it actually belongs to K. grimontii as it had a 98.81% ANI and 83.4% isDDH value with K. grimontii type strain. Strain WCHKG020121 had bla KPC-2; by contrast, none of other K. grimontii genomes carry any known carbapenemase genes. bla KPC-2 was carried by a 95,734-bp plasmid, designated pKPC2_020121, which contained two different FII(Y) replicons. pKPC2_020121 was closest (93% coverage, 99% identity) to bla KPC-2-carrying plasmids from Enterobacter hormaechei recovered in 2014 at the same hospital. pKPC2_020121 was not self-transmissible, which could be explained by the absence of a conjugation essential gene, traY. In conclusion, we reported the first K. grimontii strain that produced the KPC carbapenemase. Carbapenem resistant K. grimontii may represent a new threat.
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