Kc

KC
  • 文章类型: Journal Article
    背景:转录因子(TF)蛋白是控制细胞命运和功能的基因调节网络的关键组成部分。TFs以序列特异性方式结合DNA调控元件,并通过彼此的组合相互作用调节靶基因表达,辅因子,和染色质修饰蛋白。过去二十年的大规模研究有助于揭示调节果蝇发育的TFs复杂网络。
    结果:这里,我们提出了一个详细的表征所有已知和预测的果蝇TFs在两个成熟的胚胎细胞系中的表达,Kc167和S2细胞。使用深度覆盖RNA测序方法,我们研究了两种细胞类型中所有707TF编码基因的转录谱。仅103个TFs在任一细胞系中没有可检测的表达,并且493TFs在至少一种细胞系中具有5或更大的读段计数。493个TFs属于54个不同的DNA结合域家族,具有zf-C2H2家族中的显著富集。我们确定了123个差异表达基因,57在Kc167细胞中的表达水平明显高于S2细胞,和66在Kc167细胞中的表达水平显著低于S2细胞。网络图显示,许多这些TF是参与细胞增殖的调节网络的关键组成部分,细胞-细胞信号通路,和眼睛发育。
    结论:我们在广泛研究的果蝇Kc167和S2胚胎细胞系中产生了参考TF编码基因表达数据集,并深入了解了控制这些细胞活动的TF调控网络。
    BACKGROUND: Transcription factor (TF) proteins are a key component of the gene regulatory networks that control cellular fates and function. TFs bind DNA regulatory elements in a sequence-specific manner and modulate target gene expression through combinatorial interactions with each other, cofactors, and chromatin-modifying proteins. Large-scale studies over the last two decades have helped shed light on the complex network of TFs that regulate development in Drosophila melanogaster.
    RESULTS: Here, we present a detailed characterization of expression of all known and predicted Drosophila TFs in two well-established embryonic cell lines, Kc167 and S2 cells. Using deep coverage RNA sequencing approaches we investigate the transcriptional profile of all 707 TF coding genes in both cell types. Only 103 TFs have no detectable expression in either cell line and 493 TFs have a read count of 5 or greater in at least one of the cell lines. The 493 TFs belong to 54 different DNA-binding domain families, with significant enrichment of those in the zf-C2H2 family. We identified 123 differentially expressed genes, with 57 expressed at significantly higher levels in Kc167 cells than S2 cells, and 66 expressed at significantly lower levels in Kc167 cells than S2 cells. Network mapping reveals that many of these TFs are crucial components of regulatory networks involved in cell proliferation, cell-cell signaling pathways, and eye development.
    CONCLUSIONS: We produced a reference TF coding gene expression dataset in the extensively studied Drosophila Kc167 and S2 embryonic cell lines, and gained insight into the TF regulatory networks that control the activity of these cells.
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  • 文章类型: Journal Article
    背景圆锥角膜(KC)是一种非炎性角膜疾病,在成年期早期发病,导致视力下降。这项研究旨在评估沙特阿拉伯冰雹地区普通人群对圆锥角膜的认识水平。方法通过通过社交媒体平台分发的预先设计和预先验证的在线问卷(附录)收集数据。问卷分为两部分。第一部分包括人口统计概况,第二部分询问了有关圆锥角膜的知识和意识。对收集的数据进行了审查,编码,并输入到IBM公司2013年发布IBMSPSSStatisticsforWindows,版本22.0。Armonk,纽约:IBM公司使用皮尔逊卡方检验进行统计分析,统计学意义设置为p<0.05。结果调查对象共550人,其中男性占40%,女性占60%。79.6%的参与者年龄在18-30岁之间。KC的受教育程度和阳性家族史与KC的知识水平显着相关(p<0.05)。年龄组没有显著的关联(p=0.059),而性别与圆锥角膜知识水平有显著相关性(p<0.05)。结论总之,对KC进展的整体认识,干预措施,并且在参与者中摩擦眼睛的后果是有限的。具体努力对提高公众对KC的认识和了解至关重要,确保社区内对眼睛健康采取更明智和积极主动的方法。
    Background Keratoconus (KC) is a non-inflammatory corneal disease with an early onset in adulthood, leading to a reduction in visual acuity. This study aims to evaluate the level of awareness of keratoconus among the general population in the Hail region of Saudi Arabia. Methodology Data were collected through a pre-designed and pre-validated online questionnaire (Appendix) distributed via social media platforms. The questionnaire was divided into two sections. The first section included demographic profiles, while the second section inquired about knowledge and awareness regarding Keratoconus. The collected data was reviewed, coded, and inputted into IBM Corp. Released 2013. IBM SPSS Statistics for Windows, Version 22.0. Armonk, NY: IBM Corp. Statistical analyses were performed using the Pearson Chi-Square test, with statistical significance set at p<0.05. Results The total number of respondents was 550, among whom 40% were males and 60% were females. 79.6% of the participants were in the age range of 18-30 years. The level of education and a positive family history of KC showed significant associations with the level of knowledge about KC (p<0.05). The age group had a non-significant association (p=0.059), while gender had a significant association with the level of knowledge about keratoconus (p<0.05). Conclusion In conclusion, the overall awareness regarding KC progression, interventions, and the consequences of eye rubbing was limited among the participants. Specific efforts are crucial to enhance public awareness and understanding of KC, ensuring a more informed and proactive approach to eye health within the community.
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  • 文章类型: Journal Article
    背景:小鼠中母体炎症的诱导导致被认为是IL-6依赖性的胎儿损伤。胎儿炎症反应,由胎儿或羊水IL-6升高定义,已被描述为后续胎儿损伤的潜在机制。母体IL-6产生和信号传导在胎儿IL-6反应中的作用目前尚不清楚。
    方法:使用遗传和抗IL-6抗体策略来系统地阻断炎症期间的母体IL-6反应。在妊娠中期(E14.5)和妊娠晚期(E18.5)使用腹膜内注射脂多糖(LPS)诱导绒毛膜羊膜炎。该模型用于怀孕的C57Bl/6水坝,IL6-/-水坝,用抗IL-6(阻断经典和反式信号传导)或抗gp130抗体(仅阻断反式信号传导)和IL6+/-水坝处理的C57Bl/6水坝。注射LPS后六小时,母体血清,胎盘组织,收集羊水和胎儿组织或血清。基于珠子的多重测定用于评估IL-6,KC,IL-1β,TNF,IL-10,IL-22,IFN-γ,IL-13和IL-17A。
    结果:C57Bl/6大坝的绒毛膜羊膜炎的特征是在妊娠中期母体血清IL-6,KC和IL-22水平升高,产仔数减少。C57Bl/6小鼠中胎儿对母体炎症的反应主要表现为胎盘中IL-6、KC和IL-22水平升高,妊娠中期和晚期的羊水和胎儿。全球IL-6基因敲除(IL6-/-)根除了母体,胎盘,羊水和胎儿IL-6对LPS的反应在中期和晚期妊娠和提高产仔存活率,而对KC或IL-22反应的影响最小。在LPS暴露时阻断C57Bl/6大坝中的母体经典IL-6信号传导减少了母体,胎盘,妊娠中期和晚期羊水和胎儿IL-6反应,而阻断母体IL-6反式信号仅影响胎儿IL-6表达。为了评估母体IL-6是否穿过胎盘并到达胎儿,在绒毛膜羊膜炎模型中使用IL-6+/-大坝。IL-6+/-大坝在注射LPS后引发全身炎症反应,以IL-6、KC和IL-22升高为特征。与IL-6+/-同窝对照相比,IL6+/-大坝出生的IL-6-/-幼崽的羊水IL-6水平降低,胎儿IL-6水平检测不到。
    结论:胎儿对母体全身性炎症的反应依赖于母体IL-6信号传导,但是母体IL-6不能穿过胎盘并以可检测的水平到达胎儿。
    The induction of maternal inflammation in mice leads to fetal injury that is believed to be IL-6 dependent. The fetal inflammatory response, defined by elevated fetal or amniotic fluid IL-6, has been described as a potential mechanism for subsequent fetal injury. The role of maternal IL-6 production and signaling in the fetal IL-6 response is currently unclear.
    Genetic and anti-IL-6 antibody strategies were used to systematically block the maternal IL-6 response during inflammation. Chorioamnionitis was induced using intraperitoneal injection of lipopolysaccharide (LPS) at mid gestation (E14.5) and late gestation (E18.5). This model was used in pregnant C57Bl/6 dams, IL6-/- dams, C57Bl/6 dams treated with anti-IL-6 (blocks both classical and trans-signaling) or anti-gp130 antibodies (blocks trans-signaling only) and IL6+/- dams. Six hours following LPS injection, maternal serum, placental tissue, amniotic fluid and fetal tissue or serum were collected. A bead-based multiplex assay was used to evaluate levels of IL-6, KC, IL-1β, TNF, IL-10, IL-22, IFN-γ, IL-13 and IL-17A.
    Chorioamnionitis in C57Bl/6 dams was characterized by elevated maternal serum levels of IL-6, KC and IL-22 with litter loss during mid gestation. The fetal response to maternal inflammation in C57Bl/6 mice was primarily characterized by elevated levels of IL-6, KC and IL-22 in the placenta, amniotic fluid and fetus during both mid and late gestation. A global IL-6 knockout (IL6-/-) eradicated the maternal, placental, amniotic fluid and fetal IL-6 response to LPS during mid and late gestation and improved litter survival, while minimally influencing the KC or IL-22 responses. Blocking maternal classical IL-6 signaling in C57Bl/6 dams at the time of LPS exposure diminished the maternal, placental, amniotic fluid and fetal IL-6 response during mid and late gestation, while blocking maternal IL-6 trans-signaling only affected fetal IL-6 expression. To evaluate whether maternal IL-6 was crossing the placenta and reaching the fetus, IL-6+/- dams were utilized in the chorioamnionitis model. IL-6+/- dams mounted a systemic inflammatory response following injection with LPS, characterized by elevated IL-6, KC and IL-22. IL-6-/- pups born to IL6+/- dams had decreased amniotic fluid levels of IL-6 and undetectable levels of fetal IL-6 compared to IL-6+/+ littermate controls.
    The fetal response to systemic maternal inflammation is dependent upon maternal IL-6 signaling, but maternal IL-6 is not crossing the placenta and reaching the fetus at detectable levels.
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  • 文章类型: Journal Article
    芳基烃受体(AHR)的配体激活加速了角质形成细胞的分化和表皮通透性屏障(EPB)的形成。几类脂质,包括神经酰胺,对EPB至关重要。在正常人表皮角质形成细胞中,AHR配体,2,3,7,8-四氯二苯并-对二恶英(TCDD),神经酰胺代谢和转运基因的RNA水平增加,UDP-葡萄糖神经酰胺葡萄糖基转移酶(UGCG),ATP结合盒亚家族A成员12(ABCA12),葡萄糖神经酰胺酶β(GBA1)和鞘磷脂磷酸二酯酶1(SMPD1)。TCDD也增加了丰富的皮肤神经酰胺的水平。这些包括UGCG合成的代谢物,葡糖神经酰胺和酰基葡糖神经酰胺。染色质免疫沉淀序列分析和荧光素酶报告基因测定将UGCG鉴定为直接的AHR靶标。AHR拮抗剂,GNF351抑制TCDD介导的RNA并增加转录。Tapinarof,一种被批准用于治疗牛皮癣的AHR配体,UGCGRNA增加,蛋白质及其脂质代谢产物己糖神经酰胺,以及增加ABCA12、GBA1和SMPD1的表达。在Ahr-null小鼠中,与野生型相比,UgcgRNA和己糖神经酰胺较低。这些结果表明,AHR调节UGCG的表达,神经酰胺运输所需的神经酰胺代谢酶,角质形成细胞分化,和EPB形成。
    Ligand activation of the aryl hydrocarbon receptor (AHR) accelerates keratinocyte differentiation and the formation of the epidermal permeability barrier. Several classes of lipids, including ceramides, are critical to the epidermal permeability barrier. In normal human epidermal keratinocytes, the AHR ligand, 2,3,7,8-tetrachlorodibenzo-p-dioxin, increased RNA levels of ceramide metabolism and transport genes: uridine diphosphate glucose ceramide glucosyltransferase (UGCG), ABCA12, GBA1, and SMPD1. Levels of abundant skin ceramides were also increased by 2,3,7,8-tetrachlorodibenzo-p-dioxin. These included the metabolites synthesized by UGCG, glucosylceramides, and acyl glucosylceramides. Chromatin immunoprecipitation-sequence analysis and luciferase reporter assays identified UGCG as a direct AHR target. The AHR antagonist, GNF351, inhibited the 2,3,7,8-tetrachlorodibenzo-p-dioxin-mediated RNA and transcriptional increases. Tapinarof, an AHR ligand approved for the treatment of psoriasis, increased UGCG RNA, protein, and its lipid metabolites hexosylceramides as well as increased the RNA expression of ABCA12, GBA1, and SMPD1. In Ahr-null mice, Ugcg RNA and hexosylceramides were lower than those in the wild type. These results indicate that the AHR regulates the expression of UGCG, a ceramide-metabolizing enzyme required for ceramide trafficking, keratinocyte differentiation, and epidermal permeability barrier formation.
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  • 文章类型: Journal Article
    果蝇细胞系是跨越基因组学的一系列研究的重要资源,分子遗传学和细胞生物学。在这些有价值的细胞系中,有Kc167和S2细胞,它最初是在1960年代后期从胚胎来源中分离出来的,已被广泛用于研究广泛的生物活性,包括细胞-细胞信号传导和免疫系统功能。十年前,作为modENCODE项目的一部分,对这两种细胞类型的总RNA进行了全基因组拼接微阵列分析,并揭示了它们共享许多基因表达特征。这里,我们通过使用深度覆盖RNA测序方法来详细研究Kc和S2细胞中的转录谱来扩展这些早期研究。转录组的比较表明,在至少一种细胞系中,约有75%的13,919个注释基因以可检测的水平表达。这些基因中的大多数在两种细胞系中都以高水平表达。尽管两种细胞类型的转录景观总体相似,鉴定了2588个差异表达的基因。许多具有最大倍数变化的基因只有它们的“CG”名称才知道,这表明Kc和S2细胞身份的分子控制可能部分受到一组相对未表征的基因的调节。我们的数据还表明,两种细胞系都具有不同的血细胞样身份,但是共享活跃的信号通路,并在网络中表达许多基因,这些基因负责早期胚胎的背-腹模式。
    Drosophila melanogaster cell lines are an important resource for a range of studies spanning genomics, molecular genetics, and cell biology. Amongst these valuable lines are Kc167 (Kc) and Schneider 2 (S2) cells, which were originally isolated in the late 1960s from embryonic sources and have been used extensively to investigate a broad spectrum of biological activities including cell-cell signaling and immune system function. Whole-genome tiling microarray analysis of total RNA from these two cell types was performed as part of the modENCODE project over a decade ago and revealed that they share a number of gene expression features. Here, we expand on these earlier studies by using deep-coverage RNA-sequencing approaches to investigate the transcriptional profile in Kc and S2 cells in detail. Comparison of the transcriptomes reveals that ∼75% of the 13,919 annotated genes are expressed at a detectable level in at least one of the cell lines, with the majority of these genes expressed at high levels in both cell lines. Despite the overall similarity of the transcriptional landscape in the two cell types, 2,588 differentially expressed genes are identified. Many of the genes with the largest fold change are known only by their \"CG\" designations, indicating that the molecular control of Kc and S2 cell identity may be regulated in part by a cohort of relatively uncharacterized genes. Our data also indicate that both cell lines have distinct hemocyte-like identities, but share active signaling pathways and express a number of genes in the network responsible for dorsal-ventral patterning of the early embryo.
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  • 文章类型: Journal Article
    在本文中,我们对CXC基序趋化因子配体1(CXCL1)在生理学中的作用进行了文献综述,在选定的心血管系统的主要非癌症疾病中,呼吸系统和皮肤。CXCL1,一种属于趋化因子CXC亚家族的细胞因子,以CXC基序趋化因子受体2(CXCR2)为主要受体,导致中性粒细胞向高表达部位的迁移和浸润。这暗示CXCL1处于与炎症和嗜中性粒细胞积累相关的许多不利状况中。这项研究的目的是描述CXCL1在心血管系统疾病(动脉粥样硬化,心房颤动,慢性缺血性心脏病,高血压,脓毒症,包括脓毒症相关性脑病和脓毒症相关性急性肾损伤),呼吸系统(哮喘,慢性阻塞性肺疾病(COPD),慢性鼻-鼻窦炎,2019年冠状病毒病(COVID-19),流感,肺移植和缺血再灌注损伤和结核病)和皮肤(伤口愈合,牛皮癣,晒伤和着色性干皮病)。此外,CXCL1在血管生理学中的意义被描述,如CXCL1对血管生成和动脉生成的影响。
    In this paper, we present a literature review of the role of CXC motif chemokine ligand 1 (CXCL1) in physiology, and in selected major non-cancer diseases of the cardiovascular system, respiratory system and skin. CXCL1, a cytokine belonging to the CXC sub-family of chemokines with CXC motif chemokine receptor 2 (CXCR2) as its main receptor, causes the migration and infiltration of neutrophils to the sites of high expression. This implicates CXCL1 in many adverse conditions associated with inflammation and the accumulation of neutrophils. The aim of this study was to describe the significance of CXCL1 in selected diseases of the cardiovascular system (atherosclerosis, atrial fibrillation, chronic ischemic heart disease, hypertension, sepsis including sepsis-associated encephalopathy and sepsis-associated acute kidney injury), the respiratory system (asthma, chronic obstructive pulmonary disease (COPD), chronic rhinosinusitis, coronavirus disease 2019 (COVID-19), influenza, lung transplantation and ischemic-reperfusion injury and tuberculosis) and the skin (wound healing, psoriasis, sunburn and xeroderma pigmentosum). Additionally, the significance of CXCL1 is described in vascular physiology, such as the effects of CXCL1 on angiogenesis and arteriogenesis.
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  • 文章类型: Journal Article
    CXCL1是一种CXC趋化因子,中性粒细胞CXCR2配体和趋化因子。在本文中,我们对趋化因子CXCL1在生理和口腔和腹部器官的某些主要非癌症疾病中的作用进行了综述(牙龈,唾液腺,胃,肝脏,胰腺,肠子,和肾脏)。我们专注于CXCL1对植入和胎盘形成以及人类多能干细胞的重要性。我们还显示了CXCL1在选定的腹部器官疾病中的意义,包括胃肠道和口腔(牙周病,牙周炎,干燥综合征,幽门螺杆菌感染,糖尿病,肝硬化,酒精性肝病(ALD),非酒精性脂肪性肝病(NAFLD),HBV和HCV感染,肝脏缺血再灌注损伤,炎症性肠病(克罗恩病和溃疡性结肠炎),肥胖和超重,肾移植和缺血再灌注损伤,子宫内膜异位症和子宫腺肌病)。
    CXCL1 is a CXC chemokine, CXCR2 ligand and chemotactic factor for neutrophils. In this paper, we present a review of the role of the chemokine CXCL1 in physiology and in selected major non-cancer diseases of the oral cavity and abdominal organs (gingiva, salivary glands, stomach, liver, pancreas, intestines, and kidneys). We focus on the importance of CXCL1 on implantation and placentation as well as on human pluripotent stem cells. We also show the significance of CXCL1 in selected diseases of the abdominal organs, including the gastrointestinal tract and oral cavity (periodontal diseases, periodontitis, Sjögren syndrome, Helicobacter pylori infection, diabetes, liver cirrhosis, alcoholic liver disease (ALD), non-alcoholic fatty liver disease (NAFLD), HBV and HCV infection, liver ischemia and reperfusion injury, inflammatory bowel disease (Crohn\'s disease and ulcerative colitis), obesity and overweight, kidney transplantation and ischemic-reperfusion injury, endometriosis and adenomyosis).
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  • 文章类型: Journal Article
    这篇综述描述了CXCL1的作用,CXCL1是一种在炎症中至关重要的趋化因子,作为嗜中性粒细胞的趋化因子,在生理学和选定的主要非癌症疾病中。由于大量的可用信息,我们专注于CXCL1在骨骼生理学中的作用,骨髓,肌肉和神经系统。出于这个原因,我们描述了它对造血干细胞的影响,成肌细胞,少突胶质细胞祖细胞和破骨细胞前体。我们还介绍了CXCL1参与某些组织和器官的疾病,包括阿尔茨海默病,癫痫,单纯疱疹病毒1型(HSV-1)脑炎,缺血性卒中,严重的抑郁症,多发性硬化症,视神经脊髓炎,神经性疼痛,骨质疏松,朊病毒病,类风湿性关节炎,蜱传脑炎(TBE),创伤性脊髓损伤和西尼罗河热。
    This review describes the role of CXCL1, a chemokine crucial in inflammation as a chemoattractant for neutrophils, in physiology and in selected major non-cancer diseases. Due to the vast amount of available information, we focus on the role CXCL1 plays in the physiology of bones, bone marrow, muscle and the nervous system. For this reason, we describe its effects on hematopoietic stem cells, myoblasts, oligodendrocyte progenitors and osteoclast precursors. We also present the involvement of CXCL1 in diseases of selected tissues and organs including Alzheimer\'s disease, epilepsy, herpes simplex virus type 1 (HSV-1) encephalitis, ischemic stroke, major depression, multiple sclerosis, neuromyelitis optica, neuropathic pain, osteoporosis, prion diseases, rheumatoid arthritis, tick-borne encephalitis (TBE), traumatic spinal cord injury and West Nile fever.
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  • 文章类型: Journal Article
    BACKGROUND: As the United States becomes more diverse, determining differences in health care utilization and costs in the management of skin cancers is fundamental to decision-making in health care resource allocation and improving care for underserved populations.
    OBJECTIVE: To compare health care use and costs among non-Hispanic White, Hispanic White, and non-Hispanic Black patients with keratinocyte carcinoma.
    METHODS: A nationwide cross-sectional study was performed using Medical Expenditure Panel Survey data from 1996 to 2015.
    RESULTS: Among 54,503,447 patients with keratinocyte carcinoma (weighted) over a 20-year period, 53,134,351 (97%) were non-Hispanic White; 836,030 (1.5%) were Hispanic White; and 170,755 (0.3%) were non-Hispanic Black. Compared to non-Hispanic White patients, Hispanic White patients had significantly more ambulatory visits per person per year (5.4 vs 3.5, P = .003). Compared to non-Hispanic White patients, non-Hispanic Black patients had significantly more ambulatory visits (13.1 vs 3.5, P = .027) and emergency department visits (2.3 vs 1.1, P < .001), and incurred significantly higher ambulatory costs ($5089 vs $1131, P = .05), medication costs ($523 vs $221, P = .022), and total costs per person per year ($13,430 vs $1290, P = .032).
    CONCLUSIONS: Data for squamous cell carcinomas and basal cell carcinomas are combined.
    CONCLUSIONS: Keratinocyte carcinoma was more costly to treat and required more health care resources in non-Hispanic Black and Hispanic White patients than in non-Hispanic White patients.
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  • 文章类型: Journal Article
    Tooth eruption is characterized by a coordinated complex cascade of cellular and molecular events that promote tooth movement through the eruptive pathway. During tooth eruption, the stratum intermedium structurally changes to the papillary layer with tooth organ development. We previously reported intercellular adhesion molecule-1 (ICAM-1) expression on the papillary layer, which is the origin of the ICAM-1-positive junctional epithelium. ICAM-1 expression is induced by proinflammatory cytokines, including interleukin-1 and tumor necrosis factor. Inflammatory reactions induce tissue degradation. Therefore, this study aimed to examine whether inflammatory reactions are involved in tooth eruption. Reverse transcription-polymerase chain reaction (RT-PCR) analysis revealed sequential expression of hypoxia-induced factor-1α, interleukin-1β, and chemotactic factors, including keratinocyte-derived chemokine (KC) and macrophage inflammatory protein-2 (MIP-2), during tooth eruption. Consistent with the RT-PCR results, immunohistochemical analysis revealed KC and MIP-2 expression in the papillary layer cells of the enamel organ from the ameloblast maturation stage. Moreover, there was massive macrophage and neutrophil infiltration in the connective tissue between the tooth organ and oral epithelium during tooth eruption. These findings suggest that inflammatory reactions might be involved in the degradation of tissue overlying the tooth organ. Further, these reactions might be induced by hypoxia in the tissue overlying the tooth organ, which results from decreased capillaries in the tissue. Our findings indicate that bacterial infections are not associated with the eruption process. Therefore, tooth eruption might be regulated by innate inflammatory mechanisms.
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