KRAS G12V

  • 文章类型: Journal Article
    尽管许多研究关注胰腺腺癌(PAADs)的预后生物标志物,人们对它们的基因组特征和免疫特征之间的关系知之甚少.在这里,我们深入研究了主要驱动突变亚型与免疫表型对PAAD结局的影响.基于PAAD中基于RNA表达的免疫亚型的公开数据分析,与KRASG12D和TP53共同突变患者的不良结局相反,以Th1/Th2比率高为特征的最佳免疫亚型C3(炎症)在具有更好生存率的KRASnon-G12DTP53wt患者中相对富集,而低Th1/Th2比率的下亚型C2(IFN-γ占优势)在前者比后者更常见。此外,与高度免疫抑制的微环境(高Treg,在KRASG12DTP53mut患者中,Treg与肿瘤特异性CD4+T细胞的高比率),KRASG12VTP53wt个体通过多重免疫组织化学表现出发炎的背景。如我们的队列所示,在接受辅助化疗的术后PAAD患者中,这可能是他们优于其他患者的生存优势。一起,KRASG12VTP53wt可能是一种有前途的生物标志物,可用于预后评估和用PAAD筛选某些候选者,以从辅助化疗中获得理想的生存益处。
    Despite many studies focusing on the prognostic biomarkers in pancreatic adenocarcinomas (PAADs), there is ill-informed about the relationships between their genomic features and immune characteristics. Herein, we deeply investigated the involvement of major driver mutation subtypes with immunophenotypes impacting PAAD outcomes. Based on public data analyses of RNA expression-based immune subtypes in PAAD, in contrast to KRAS G12D & TP53 co-mutant patients with poor outcomes, the best immune subtype C3 (inflammatory) characterized by high Th1/Th2 ratio was relatively enriched in KRASnon-G12DTP53wt patients with better survival, whereas the inferior subtype C2 (IFN-γ dominant) with low Th1/Th2 ratio was more common in the former than in the latter. Moreover, contrary to the highly immunosuppressive microenvironment (high Treg, high ratio of Treg to tumor-specific CD4+ T cell) in KRASG12DTP53mut patients, KRASG12VTP53wt individuals exhibited an inflamed context profiled by multiplex immunohistochemistry. It could be responsible for their outstanding survival advantage over others in postsurgical PAAD patients receiving adjuvant chemotherapy as shown by our cohort. Together, KRASG12VTP53wt may be a promising biomarker for prognostic evaluation and screening certain candidates with PAAD to get desirable survival benefit from adjuvant chemotherapy.
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  • 文章类型: Journal Article
    急性髓细胞性白血病(AML)是一种起源于骨髓造血干细胞的恶性疾病。最近的研究表明,某些基因突变通过影响肿瘤细胞的代谢机制,促进肿瘤细胞的存活并影响患者的预后。RAS基因突变在AML中普遍存在,RAS信号通路与许多代谢通路密切相关。然而,不同RAS基因突变对AML细胞代谢的影响尚不清楚.
    本研究的主要目的是探讨RAS基因突变对肿瘤细胞代谢途径的影响。
    在这项研究中,我们首先使用携带突变基因的逆转录病毒制备具有RAS基因突变的Ba/F3细胞系,然后比较RAS基因突变前后Ba/F3细胞的全转录组数据,发现NRASQ61K和KRASG12V突变后差异表达基因。
    我们在NRASQ61K和KRASG12V突变后发现了总共1899个差异表达基因。1089个基因参与代谢过程,其中167个基因富集在代谢相关途径中。在代谢相关途径中,差异基因与脂质代谢途径相关。此外,通过比较群体,我们发现DGKzeta和PLA2G4A基因在甘油磷脂代谢途径中的表达显著上调。
    总而言之,本研究发现,Ba/F3细胞中RAS基因突变与甘油磷脂代谢途径密切相关,这可能有助于新的精准治疗策略以及新的AML治疗药物的开发和应用。
    UNASSIGNED: Acute myeloid leukemia (AML) is a malignant disease originating from myeloid hematopoietic stem cells. Recent studies have shown that certain gene mutations promote tumor cell survival and affect the prognosis of patients by affecting metabolic mechanisms in tumor cells. RAS gene mutations are prevalent in AML, and the RAS signaling pathway is closely related to many metabolic pathways. However, the effects of different RAS gene mutations on AML cell metabolism are unclear.
    UNASSIGNED: The main purpose of this study was to explore the effect of RAS gene mutation on the metabolic pathway of tumor cells.
    UNASSIGNED: In this study, we first used a retrovirus carrying a mutant gene to prepare Ba/F3 cell lines with RAS gene mutations, and then compared full-transcriptome data of Ba/F3 cells before and after RAS gene mutation and found that differentially expressed genes after NRASQ61K and KRASG12V mutation.
    UNASSIGNED: We found a total of 1899 differentially expressed genes after NRASQ61K and KRASG12V mutation. 1089 of these genes were involved in metabolic processes, of which 167 genes were enriched in metabolism-related pathways. In metabolism-related pathways, differential genes were associated with the lipid metabolism pathway. Moreover, by comparing groups, we found that the expression of the DGKzeta and PLA2G4A genes in the glycerophospholipid metabolism pathway was significantly upregulated.
    UNASSIGNED: In conclusion, our study revealed that RAS gene mutation is closely related to the glycerophospholipid metabolism pathway in Ba/F3 cells, which may contribute to new precision therapy strategies and the development and application of new therapeutic drugs for AML.
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  • 文章类型: Journal Article
    像KRAS这样的“不可用”目标在药物开发中尤其具有挑战性。我们设计了一种新颖的化学击倒策略,CANDDY(具有亲和力的化学击倒Nd降解动力学)技术,其使用与从蛋白酶体抑制剂修饰的降解标签(CANDDY标签)缀合的小分子(CANDDY分子)促进蛋白质降解。我们证明了CANDDY标签允许直接蛋白酶体靶标降解而不依赖于泛素化。我们合成了一种KRAS降解CANDDY分子,TUS-007,其在KRAS突变体(G12D和G12V)和野生型KRAS中诱导降解。我们证实了TUS-007在腹膜内给药的人结肠细胞皮下异种移植模型(KRASG12V)和口服给药的人胰腺细胞原位异种移植模型(KRASG12D)中的肿瘤抑制作用。因此,CANDDY技术有可能在治疗上靶向以前不可用的蛋白质,提供了一种更简单、更实用的药物靶向方法,并避免了E3酶与靶标匹配的困难。
    \"Undruggable\" targets such as KRAS are particularly challenging in the development of drugs. We devised a novel chemical knockdown strategy, CANDDY (Chemical knockdown with Affinity aNd Degradation DYnamics) technology, which promotes protein degradation using small molecules (CANDDY molecules) that are conjugated to a degradation tag (CANDDY tag) modified from proteasome inhibitors. We demonstrated that CANDDY tags allowed for direct proteasomal target degradation independent of ubiquitination. We synthesized a KRAS-degrading CANDDY molecule, TUS-007, which induced degradation in KRAS mutants (G12D and G12V) and wild-type KRAS. We confirmed the tumor suppression effect of TUS-007 in subcutaneous xenograft models of human colon cells (KRAS G12V) with intraperitoneal administrations and in orthotopic xenograft models of human pancreatic cells (KRAS G12D) with oral administrations. Thus, CANDDY technology has the potential to therapeutically target previously undruggable proteins, providing a simpler and more practical drug targeting approach and avoiding the difficulties in matchmaking between the E3 enzyme and the target.
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  • 文章类型: Case Reports
    目的:探讨影响胰腺癌患者长期生存的肿瘤免疫微环境的分子特征。
    方法:一名女性PAAD患者(生存超过13年)的肿瘤相关遗传特征,该患者患有多次复发和转移,并深入调查了十年来的六次行动。表征了她的原发性病变以及不同时间点的六个转移性肿瘤的基因组特征和免疫微环境特征。
    结果:在这些标本中发现的高频克隆新基因突变表明克隆新抗原与每次手术后的预后之间存在显著关联。同时,TCGA和ICGC数据库用于分析胰腺癌中KRASG12V的功能.
    结论:克隆新抗原的基因组分析与肿瘤免疫微环境相结合,可以促进对个性化预后评估的理解和对切除的PAAD患者进行分层。
    OBJECTIVE: To investigate the molecular characteristics in tumor immune microenvironment that affect long-term survival of patients with pancreatic adenocarcinoma (PAAD).
    METHODS: The tumor related genetic features of a female PAAD patient (over 13-year survival) who suffered from multiple recurrences and metastases, and six operations over one decade were investigated deeply. Genomic features and immune microenvironment signatures of her primary lesion as well as six metastatic tumors at different time-points were characterized.
    RESULTS: High-frequency clonal neoantigenic mutations identified in these specimens revealed the significant associations between clonal neoantigens with her prognosis after each surgery. Meanwhile, the TCGA and ICGC databases were employed to analyse the function of KRAS G12V in pancreatic cancer.
    CONCLUSIONS: The genomic analysis of clonal neoantigens combined with tumor immune microenvironment could promote the understandings of personalized prognostic evaluation and the stratification of resected PAAD individuals with better outcome.
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  • 文章类型: Journal Article
    Limited clinical application of antibody-drug conjugates (ADCs) targeting tumor associated antigens (TAAs) is usually caused by on-target off-tumor side effect. Tumor-specific mutant antigens (TSMAs) only expressed in tumor cells which are ideal targets for ADCs. In addition, intracellular somatic mutant proteins can be presented on the cell surface by human leukocyte antigen class I (HLA I)molecules forming tumor-specific peptide/HLA I complexes. KRAS G12V mutation frequently occurred in varied cancer and was verified as a promising target for cancer therapy. In this study, we generated two TCR-mimic antibody-drug conjugates (TCRm-ADCs), 2E8-MMAE and 2A5-MMAE, targeting KRAS G12V/HLA-A*0201 complex, which mediated specific antitumor activity in vitro and in vivo without obvious toxicity. Our findings are the first time validate the strategy of TCRm-ADCs targeting intracellular TSMAs, which improves the safety of antibody-based drugs and provides novel strategy for precision medicine in cancer therapy.
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  • 文章类型: Journal Article
    Approximately 30%-50% of colorectal cancers (CRCs) harbor the somatic mutated KRAS gene. KRAS G12V, one of the most common KRAS mutations in CRCs, is linked to increased tumor aggressiveness, less response to anti-epidermal growth factor receptor (EGFR) therapy, and poor survival rate. In this study, we sought to determine whether resistance to EGFR inhibitors in colorectal cancer cells harboring KRAS G12V mutation is associated with hypoxia. Our data indicated that HIF-1α was induced by KRAS G12V signaling at transcription level. Hypoxia or HIF-1α overexpression could increase KRAS G12V activity. Therefore, a positive feedback between hypoxia and KRAS G12V activation was formed. Cetuximab, an EGFR inhibitor, which has a minor effect on KRAS-mutant CRCs, could effectively inhibit the proliferation of CRC cells harboring KRAS G12V mutation when combined with HIF-1α inhibitor PX-478. Our data indicated that hypoxia was involved in resistance to anti-EGFR therapy, and a combination therapy might be necessary for CRC patients with KRAS mutation.
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