Intestinal infection

肠道感染
  • 文章类型: Journal Article
    目的分析重症监护病房(ICU)肺炎患者肠道感染的患病率及肠道感染对肺炎患者预后的影响,探讨肺炎与肠道感染的双向关联。本研究旨在探讨ICU患者发生肺炎与肠道感染的相关性,利用医疗信息集市重症监护IV(MIMIC-IV)数据库,以及肠道感染对肺炎患者预后的影响。首先将入选患者分为肺炎组和非肺炎组,主要结局是患者出现肠道感染.采用多因素logistic回归分析肺炎与肠道感染的关系,使用倾向评分匹配(PSM)和治疗加权逆概率(IPTW)来验证我们的研究结果.然后我们根据肺炎患者是否并发肠道感染分为两组,并分析了肠道感染对28天死亡率的影响,ICU住院时间,肺炎患者的住院时间。这项研究包括50,920名患者,其中7493人被诊断为肺炎。与非肺炎患者相比,肺炎患者肠道感染发生率显著升高[OR1.58(95%CI1.34~1.85;P<0.001)].Cox比例风险回归模型显示合并感染对肺炎患者28天死亡率无显著影响(P=0.223)。肠道感染组患者在ICU和住院时间均明显长于未发生肠道感染组(P<0.001)。在ICU,肺炎患者更可能与肠道感染有关.此外,并发肠道感染可以延长肺炎患者的ICU和住院时间.
    The purpose is to analyze the prevalence of intestinal infection in patients with pneumonia in intensive care units (ICU) and the impact of intestinal infection on the prognosis of patients with pneumonia, so as to explore the bidirectional association between pneumonia and intestinal infection. The study aims to investigate the correlation between the occurrence of pneumonia and intestinal infection among patients in the ICU, utilizing the Medical Information Mart for Intensive Care IV (MIMIC-IV) database, as well as the impact of intestinal infection on the prognosis of pneumonia patients. The enrolled patients were first divided into pneumonia group and non-pneumonia group, and the primary outcome was that patients developed intestinal infection. Multivariate logistic regression was used to elucidate the association between pneumonia and the prevalence of intestinal infection, and propensity score matching (PSM) and inverse probability of treatment weighing (IPTW) were used to validate our findings. We then divided patients with pneumonia into two groups according to whether they were complicated by intestinal infection, and analyzed the effect of intestinal infection on 28-day mortality, length of ICU stay, and length of hospital stay in patients with pneumonia. This study included 50,920 patients, of which 7493 were diagnosed with pneumonia. Compared with non-pneumonia patients, the incidence of intestinal infection in pneumonia patients was significantly increased [OR 1.58 (95% CI 1.34-1.85; P < 0.001)]. Cox proportional hazards regression model showed no significant effect of co-infection on 28-day mortality in patients with pneumonia (P = 0.223). Patients in the intestinal infection group exhibited a longer length stay in ICU and hospital than those without intestinal infection (P < 0.001). In the ICU, patients with pneumonia were more likely linked to intestinal infection. In addition, the presence of concurrent intestinal infections can prolong both ICU and hospital stays for pneumonia patients.
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  • 文章类型: Journal Article
    SARS-CoV-2的Omicron变体以BA.1,XBB.1.5,EG.5和JN.1等多个亚变体为特征,在2022年初成为主要菌株。研究表明,与祖先菌株相比,Omicron在肺组织中的复制效率较低。然而,Omicron在胃肠道中的传染性尚未完全定义,尽管70%的COVID-19患者出现消化疾病症状。这里,使用原发性人类结肠,我们发现,不管个体差异如何,与祖先菌株或Delta变体相比,Omicron感染结肠细胞的效率相似或较低。该变体诱导了有限的III型干扰素表达,并且对上皮完整性没有显着影响。进一步的实验表明,Omicron刺突蛋白的细胞间扩散和刺突蛋白裂解效率低下,可能导致其较低的感染性颗粒水平。这些发现强调了人类结肠样中变异特异性复制的差异,提供对Omicron的肠道嗜性及其与长期COVID症状的相关性的见解。
    The Omicron variant of SARS-CoV-2, characterized by multiple subvariants including BA.1, XBB.1.5, EG.5, and JN.1, became the predominant strain in early 2022. Studies indicate that Omicron replicates less efficiently in lung tissue compared to the ancestral strain. However, the infectivity of Omicron in the gastrointestinal tract is not fully defined, despite the fact that 70% of COVID-19 patients experience digestive disease symptoms. Here, using primary human colonoids, we found that, regardless of individual variability, Omicron infects colon cells similarly or less effectively than the ancestral strain or the Delta variant. The variant induced limited type III interferon expression and showed no significant impact on epithelial integrity. Further experiments revealed inefficient cell-to-cell spread and spike protein cleavage in the Omicron spike protein, possibly contributing to its lower infectious particle levels. The findings highlight the variant-specific replication differences in human colonoids, providing insights into the enteric tropism of Omicron and its relevance to long COVID symptoms.
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  • 文章类型: Journal Article
    检查肠道病原体和肠道微生物群之间的相互作用对于充分理解肠道病原体的致病作用及其对人类健康的更广泛影响至关重要。在实验室实践中引入了人类研究的有效替代方法,以评估感染因子对肠道微生物群的影响。从而探索它们在肠道功能和整体健康中的翻译意义。目前,不同的动物物种被用作有价值的肠道感染模型。此外,考虑到生物工程的最新进展,类似于肠道环境的未来体外模型也可用于此目的。在这次审查中,主要人类肠病原体的影响(即,艰难梭菌,空肠弯曲杆菌,致泻性大肠杆菌,非伤寒沙门氏菌,福氏志贺氏菌和宋内志贺氏菌,霍乱弧菌,和蜡样芽孢杆菌)对肠道微生物群落的影响进行了总结,特别强调采用动物和体外模型的研究结果。
    Examining the interplay between intestinal pathogens and the gut microbiota is crucial to fully comprehend the pathogenic role of enteropathogens and their broader impact on human health. Valid alternatives to human studies have been introduced in laboratory practice to evaluate the effects of infectious agents on the gut microbiota, thereby exploring their translational implications in intestinal functionality and overall health. Different animal species are currently used as valuable models for intestinal infections. In addition, considering the recent advances in bioengineering, futuristic in vitro models resembling the intestinal environment are also available for this purpose. In this review, the impact of the main human enteropathogens (i.e., Clostridioides difficile, Campylobacter jejuni, diarrheagenic Escherichia coli, non-typhoidal Salmonella enterica, Shigella flexneri and Shigella sonnei, Vibrio cholerae, and Bacillus cereus) on intestinal microbial communities is summarized, with specific emphasis on results derived from investigations employing animal and in vitro models.
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  • 文章类型: Journal Article
    目的:延续性腹泻(ProD)是指持续超过1周的急性腹泻。作为病因,风险因素和管理定义不清,我们前瞻性纳入了在高收入地区住院的儿童,以评估这些结局并调查肠道微生物群的潜在作用.
    方法:纳入所有30天至14岁因急性腹泻持续7-14天入院的儿童。同期连续入院的急性腹泻(AD)儿童作为对照。16SrRNA基因扩增子的高通量测序用于分析来自患者和健康对照的子集的粪便样品。
    结果:68名ProD患者和104名AD患者入选。肠道感染是两组腹泻的主要病因(ProD92.9%vs.AD97.8%)。与AD相比,ProD儿童的细菌感染率更高(30.8%vs.8.9%,p=0.024)。无论是年龄,宿主相关因素,微生物组改变也不与ProD特异性相关。然而,ProD儿童的初始临床表现比AD更严重。
    结论:ProD通常是异常严重的肠道感染的结果,其病程比预期的要长,但通常没有进一步的问题就可以解决。在大多数情况下,不应进行特定的管理或治疗。
    Prolonged diarrhoea (ProD) refers to acute-onset diarrhoea that persists for longer than 1 week. As the aetiology, risk factors and management are poorly defined, we prospectively enrolled children hospitalised in a high-income setting to assess these outcomes and investigate the potential role of gut microbiota.
    All children aged 30 days to 14 years admitted for acute-onset diarrhoea lasting 7-14 days were included. Children consecutively admitted in the same period for acute diarrhoea (AD) served as controls. High-throughput sequencing of 16S rRNA gene amplicons was used to analyse stool samples from a subset of patients and healthy controls.
    Sixty-eight with ProD and 104 with AD were enrolled. Intestinal infections were the main aetiology of diarrhoea in both groups (ProD 92.9% vs. AD 97.8%). ProD children showed a higher prevalence of bacterial infections compared to AD (30.8% vs. 8.9%, p = 0.024). Neither age, host-related factors, nor microbiome alterations were specifically linked to ProD. However, ProD children had a more severe initial clinical presentation than AD.
    ProD is often the result of an unusually severe intestinal infection that runs a course longer than expected but generally resolves without further problems. No specific management or therapies should be undertaken in most cases.
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  • 文章类型: Case Reports
    Streptococcus dysgalactiae subsp. equisimillis (SDSE) is classified as a group G streptococcus (GGS). In systemic SDSE infection, septic shock is easily induced and has a high mortality of 44%. The case was a 78-year-old man presented with fever and chills of 20 hours duration. He was in shock at the presentation and developed melena on day nine. CT images showed bowel wall thickening with emphysema and bedside colonoscopy showed active bleeding in the descending colon and rectum. Blood cultures were positive for Streptococcus dysgalactiae and a diagnosis of streptococcal toxic shock syndrome (STSS) due to SDSE was made. Urgent Hartmann procedure with laparotomy for removal of descending and rectal colon was performed to relieve his shock status. His shock status was reversed after surgery. Surgical specimens confirmed the presence of SDSE on the intestinal mucosa. This is the first case of STSS due to SDSE infection of the intestinal wall. Resection of infected tissue in the setting of multiple organ dysfunction syndrome and necrotizing enterocolitis is indicated in such cases.
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  • 文章类型: Journal Article
    志贺氏菌属。是细菌性痢疾和志贺氏菌病的病原体,主要是生活在发展中国家的儿童。由于缺乏合适的感染动物模型,对志贺氏菌在体内的整个生命周期的研究以及对候选疫苗的保护效力的评估受到了阻碍。到目前为止,没有一项研究评估(兔子,豚鼠,小鼠)允许在志贺氏菌口服攻击后重述完整的志贺氏菌病症状。历史报道表明,痢疾和镰刀病都是与抗坏血酸缺乏相关的代谢性疾病。哺乳动物,易患志贺氏菌感染(人类,非人灵长类动物和豚鼠)是少数无法合成抗坏血酸盐的物种之一。我们优化了低抗坏血酸饮食以诱导中度抗坏血酸缺乏,但不是镰刀病,在豚鼠中研究维生素C状态不良是否会增加志贺氏菌病的进展。在所有测试的菌株中(志贺氏菌宋内志贺氏菌,福氏志贺氏菌5a,and2a).在较晚的时间点,在破裂的结肠粘膜和腔室中都观察到大量的中性粒细胞流入,尽管志贺氏菌能够传播到器官深处,到达粘膜下层和血液。此外,我们发现,在Gulo-/-小鼠感染模型中,抗坏血酸缺乏也会增加志贺氏菌向结肠上皮层的渗透。这些新的志贺氏菌病啮齿动物模型的使用为志贺氏菌感染策略和志贺氏菌感染的免疫反应的研究打开了新的大门。
    Shigella spp. are the causative agents of bacterial dysentery and shigellosis, mainly in children living in developing countries. The study of Shigella entire life cycle in vivo and the evaluation of vaccine candidates\' protective efficacy have been hampered by the lack of a suitable animal model of infection. None of the studies evaluated so far (rabbit, guinea pig, mouse) allowed the recapitulation of full shigellosis symptoms upon Shigella oral challenge. Historical reports have suggested that dysentery and scurvy are both metabolic diseases associated with ascorbate deficiency. Mammals, which are susceptible to Shigella infection (humans, non-human primates and guinea pigs) are among the few species unable to synthesize ascorbate. We optimized a low-ascorbate diet to induce moderate ascorbate deficiency, but not scurvy, in guinea pigs to investigate whether poor vitamin C status increases the progression of shigellosis. Moderate ascorbate deficiency increased shigellosis symptom severity during an extended period of time (up to 48 h) in all strains tested (Shigella sonnei, Shigella flexneri 5a, and 2a). At late time points, an important influx of neutrophils was observed both within the disrupted colonic mucosa and in the luminal compartment, although Shigella was able to disseminate deep into the organ to reach the sub-mucosal layer and the bloodstream. Moreover, we found that ascorbate deficiency also increased Shigella penetration into the colon epithelium layer in a Gulo-/- mouse infection model. The use of these new rodent models of shigellosis opens new doors for the study of both Shigella infection strategies and immune responses to Shigella infection.
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  • 文章类型: Case Reports
    沙门氏菌雷丁是一种罕见的肠道沙门氏菌血清型,与世界各地的散发病例和罕见暴发有关。本文描述了从印度尼西亚进口到莫斯科的罕见的全身性S.Reading感染病例,俄罗斯。一名三十七岁男子因发烧入院,弱点,从印度尼西亚回来后头痛。在印尼逗留期间,他出现了胃肠道感染的症状,在那里解决了。然而,回到莫斯科后,他的病情因高烧而恶化,他被诊断为由S.Reading引起的全身性沙门氏菌病(血液和粪便培养阳性)。该病例强调了发热患者鉴别诊断的重要性。强调了与前往异国旅行相关的健康风险以及预防措施的重要性。这是东欧第一个出版的S.Reading案例。
    Salmonella Reading is a rare serotype of Salmonella enterica and is associated with sporadic cases and rare outbreaks worldwide. This article describes a rare case of generalized S. Reading infection imported from Indonesia to Moscow, Russia. A 37-year-old man was admitted to the hospital with fever, weakness, and headache after returning from Indonesia. During his stay in Indonesia, he developed symptoms of a gastrointestinal infection, which resolved there. However, upon return to Moscow, his condition worsened due to high fever, and he was diagnosed with a generalized salmonellosis caused by S. Reading (positive blood and stool culture). This case highlights the importance of differential diagnosis in patients with fever. The health risks associated with traveling to exotic countries and the importance of preventive measures are emphasized. This is the first published case of S. Reading in Eastern Europe.
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  • 文章类型: Journal Article
    艰难梭菌(CD)是抗生素相关性腹泻和假膜性肠炎的主要原因。艰难梭菌感染(CDI)越来越多地存在于社区中,并且代表了医疗保健系统的重大负担。迫切需要从对其分子发病机理的更好理解中鉴定新的基于免疫的治疗靶标。Toll样受体7(TLR7)是一种重要的模式识别受体,作为一种免疫传感器,可以触发宿主对病原体的防御。但是TLR7和CDI之间的关系仍然未知。这里,我们报道TLR7的表达水平在CDI患者和小鼠中显著升高。在CDI小鼠中缺乏TLR7表现出增强的肠道内容物的细菌清除和减少的肠道炎症,水肿,伤害和延长生存。TLR7丢失降低了肿瘤坏死因子(TNF)-α的浓度,干扰素(IFN)-γ和IFN-α1在肠道和改善组织损伤和炎症。流式细胞术和免疫荧光结果表明,TLR7增强了感染肠道中白细胞的募集。体外研究结果表明,TLR7能损害巨噬细胞对CD的吞噬和杀伤能力,促进活性氧(ROS)的产生并加速细胞凋亡。据我们所知,我们的研究首次确定TLR7是一个关键因素,有助于CDI的免疫病理学,提示靶向TLR7可能是CDI的潜在治疗方法.
    Clostridioides difficile (CD) is a major cause of antibiotic-associated diarrhea and pseudomembranous enteritis. C. difficile infection (CDI) is increasingly present in the community and represents a significant burden on the healthcare system. Identification of novel immune-based therapeutic targets from a better understanding of their molecular pathogenesis is urgently required. Toll-like receptor 7 (TLR7) is an important pattern recognition receptor and function as an immune sensor that can trigger host defenses against pathogens, but the relationship between TLR7 and CDI remains unknown. Here, we reported that the expression levels of TLR7 increased significantly in patients and mice with CDI. Absence of TLR7 in mice with CDI demonstrated enhanced bacterial clearance of intestinal contents and reduced intestinal inflammation, edema, injury and prolonged the survival. TLR7 loss decreased the concentrations of tumor necrosis factor (TNF)-α, interferon (IFN)-γ and IFN-α1 in the intestine and improved tissue damage and inflammation. Flow cytometry and immunofluorescence results indicated that TLR7 enhanced leukocyte recruitment in the infected intestine. In-vitro results have shown that TLR7 impairs the phagocytosis and killing ability of macrophages to CD, prompts reactive oxygen species (ROS) production and accelerates apoptosis. To our knowledge, our study first identified TLR7 as a critical factor that contributes to the immunopathology of CDI, suggesting that targeting TLR7 might serve as a potential treatment for CDI.
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  • 文章类型: Journal Article
    抗生素粘菌素是抵抗多药耐药(MDR)革兰氏阴性细菌感染的最后一道防线。微生物中粘菌素抗性的出现是一个关键的挑战。在这里,姜黄素被发现了,第一次,通过棋盘法逆转粘菌素耐药菌的耐药表型。对于姜黄素和粘菌素的共同递送,制备包封两种药物(Lipo-cc)的带负电荷的聚(乙二醇)官能化脂质体。杀死动力学和活/死试验证实了Lipo-cc对粘菌素抗性细菌的抗菌活性,比游离姜黄素和粘菌素组合更有效。力学研究表明,Lipo-cc恢复了粘菌素对细菌膜的亲和力,并改善了姜黄素的摄取,导致外排泵活动减少,实现粘菌素和姜黄素的协同作用。在有效抗菌剂量下,Lipo-cc没有表现出任何毒性。在粘菌素抗性大肠杆菌诱导的肠道细菌感染模型中进一步证明了Lipo-cc的治疗功效。Lipo-cc减少了细菌负担,减少了6个对数以上,并减轻了由感染引起的炎症。重要的是,不像粘菌素,Lipo-cc不影响肠道菌群的稳态。一起来看,Lipo-cc成功克服了粘菌素抗性,表明其治疗粘菌素耐药细菌感染的潜力。本文受版权保护。保留所有权利。
    Antibiotic colistin is the last line of defense against multidrug-resistant (MDR) Gram-negative bacterial infections. Emergence of colistin resistance in microbes is a critical challenge. Herein, curcumin is discovered, for the first time, to reverse the resistance phenotype of colistin-resistant bacteria via a checkerboard assay. For the co-delivery of curcumin and colistin, negatively charged poly(ethylene glycol)-functionalized liposomes encapsulating both drugs (Lipo-cc) are prepared. Killing kinetics and live/dead assays confirm the antibacterial activity of Lipo-cc against colistin-resistant bacteria, which is more potent than that of the free curcumin and colistin combination. Mechanistical studies reveal that Lipo-cc restores the affinity of colistin for the bacterial membrane and improves the uptake of curcumin, which leads to reduced efflux pump activity, achieving a synergistic effect of colistin and curcumin. At the effective antibacterial dose, Lipo-cc does not exhibit any toxicity. The therapeutic efficacy of Lipo-cc is further demonstrated in an intestinal bacterial infection model induced with colistin-resistant Escherichia coli. Lipo-cc reduces the bacterial burden with over 6-log reduction and alleviated inflammation caused by infection. Importantly, unlike colistin, Lipo-cc does not affect the homeostasis of the intestinal flora. Taken together, Lipo-cc successfully overcame colistin resistance, indicating its potential for the treatment of colistin-resistant bacterial infections.
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  • 文章类型: Journal Article
    肠道微生物组可能在结肠癌的病因和进展中起重要作用。本假设检验研究比较了诊断为肠道梭状芽孢杆菌(以前为艰难梭状芽孢杆菌)(Cdiff队列)的成年人与未诊断为肠道Cdiff感染的成年人(非Cdiff队列)的结肠癌发病率。
    检查了1990年至2012年在佛罗里达医疗补助系统中注册的纵向成人队列(整体队列)中的独立医疗保健研究数据库(IHRD)中的取消识别资格和索赔记录。对连续8年以上门诊就诊的成年人进行了检查。Cdiff队列中有964名成年人,非Cdiff队列中有292,136名成年人。使用频率和Cox比例风险模型。
    在整个研究期间,非Cdiff队列中的结肠癌发病率保持相对一致,而在Cdiff诊断的前4年内,Cdiff队列中观察到显著增加。与非Cdiff队列(每1000人年1.16)相比,Cdiff队列(每1000人年3.11)的结肠癌发病率显着增加(约2.7倍)。性别调整,年龄,residence,出生日期,结肠镜检查筛查,癌症家族史,以及个人的烟草滥用史,酗酒/依赖,药物滥用/依赖,超重/肥胖,以及考虑溃疡性结肠炎和感染性结肠炎的诊断状态,免疫缺陷,和个人癌症史没有显著改变观察到的结果。
    这是第一个将Cdiff与结肠癌风险增加相关的流行病学研究。未来的研究应该进一步评估这种关系。
    UNASSIGNED: The gut microbiome may play an important role in the etiology and progression of colon cancer. The present hypothesis-testing study compared the colon cancer incidence rate among adults diagnosed with intestinal Clostridioides (formerly Clostridium) difficile (Cdiff) (the Cdiff cohort) to adults not diagnosed with intestinal Cdiff infection (the non-Cdiff cohort).
    UNASSIGNED: De-identified eligibility and claim healthcare records within the Independent Healthcare Research Database (IHRD) from a longitudinal cohort of adults (the overall cohort) enrolled in the Florida Medicaid system between 1990 through 2012 were examined. Adults with ≥ 8 outpatient office visits over 8 years of continuous eligibility were examined. There were 964 adults in the Cdiff cohort and 292,136 adults in the non-Cdiff cohort. Frequency and Cox proportional hazards models were utilized.
    UNASSIGNED: Colon cancer incidence rate in the non-Cdiff cohort remained relatively uniform over the entire study period, whereas a marked increase was observed in the Cdiff cohort within the first 4 years of a Cdiff diagnosis. Colon cancer incidence was significantly increased (about 2.7-fold) in the Cdiff cohort (3.11 per 1,000 person-years) compared to the non-Cdiff cohort (1.16 per 1,000 person-years). Adjustments for gender, age, residency, birthdate, colonoscopy screening, family history of cancer, and personal history of tobacco abuse, alcohol abuse/dependence, drug abuse/dependence, and overweight/obesity, as well as consideration of diagnostic status for ulcerative and infection colitis, immunodeficiency, and personal history of cancer did not significantly change the observed results.
    UNASSIGNED: This is the first epidemiological study associating Cdiff with an increased risk for colon cancer. Future studies should further evaluate this relationship.
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