Induction

感应
  • 文章类型: Journal Article
    一些多发性硬化症(MS)患者在阿仑单抗(ALM)后表现出疾病活动性的原因尚不清楚,但是奥克瑞珠单抗(OCR)可以代表一种有趣的序贯治疗方法.
    研究OCR在两个ALM疗程后有疾病活动的MS患者中的安全性和有效性。
    观察性回顾性多中心意大利队列研究。
    包括72名受试者。平均随访(FU)为2.4(±1)年。45名患者(62.5%)经历了至少一次不良事件(AE),感染占病例的96.7%。在OCR开始和6个月FU之间观察到总淋巴细胞减少,由BCD19+淋巴细胞耗竭驱动(p<0.001)。免疫球蛋白M(IgM)水平在OCR开始和6个月FU之间降低(p<0.001)。在2年FU,复发,磁共振成像(MRI)活动和无残疾恶化生存率为92.1%,90.8%,和89.2%。两个ALM疗程之间炎症活动的证据与较高的复发风险相关,MRI活动,复发缓解型多发性硬化症的NEDA-3状态丧失(RRMS;分别为p=0.02,p=0.05,p=0.01)。
    两次ALM疗程后的OCR似乎是安全有效的。早期IgM低球蛋白血症发生在高比例的患者中。ALM疗程之间炎症活动的证据似乎增加了OCR治疗中MS再激活的风险。
    UNASSIGNED: The reason why some multiple sclerosis (MS) patients show disease activity after alemtuzumab (ALM) is still unclear, but ocrelizumab (OCR) could represent an interesting sequential therapeutic approach.
    UNASSIGNED: To investigate safety and efficacy of OCR in MS patients with disease activity after two ALM courses.
    UNASSIGNED: Observational retrospective multi-centers Italian cohort study.
    UNASSIGNED: Seventy-two subjects were included. Mean follow-up (FU) was 2.4 (±1) years. Forty-five patients (62.5%) experienced at least one adverse event (AE), with infections accounting for 96.7% of cases. A reduction in total lymphocytes was observed between OCR start and 6 months FU, driven by BCD19+ lymphocytes depletion (p < 0.001). Immunoglobulin M (IgM) levels decreased between OCR start and 6 months FU (p < 0.001). At 2-year FU, relapse, magnetic resonance imaging (MRI) activity and disability worsening-free survival were 92.1%, 90.8%, and 89.2%. The evidence of inflammatory activity between the two ALM courses was associated with higher risk of relapse, MRI activity, and NEDA-3 status loss in relapsing-remitting multiple sclerosis (RRMS; p = 0.02, p = 0.05, p = 0.01, respectively).
    UNASSIGNED: OCR after two ALM courses seemed to be safe and effective. Early IgM hypogammaglobulinemia occurred in a high proportion of patients. The evidence of inflammatory activity between ALM courses seemed to increase the risk of MS re-activation on OCR treatment.
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  • 文章类型: Journal Article
    目的:评估普萘洛尔对引产或延长分娩时间的影响。
    方法:PubMed,Scopus,科克伦图书馆,ClinicalTrials.gov,和CINAHL(EBSCO)从开始到2023年12月进行了搜索。
    方法:研究普萘洛尔对接受引产或延长分娩的患者分娩时间的影响的随机对照试验(RCT)。随机分组前包括死产的随机对照试验,非随机试验,观察,队列,案例控制,或对照组包括标准治疗以外的干预措施的研究被排除.
    方法:主要结局是在接受引产或增加分娩的患者中给予普萘洛尔后的分娩时间。汇总措施报告为汇总平均差(MD)或相对风险,置信区间为95%(CI)。
    结果:本荟萃分析纳入了9项随机对照试验,包括1,182例患者。五项研究调查了普萘洛尔在接受引产(IOL)的患者中的作用,并证明了分娩时间的显着减少(MD,-91.5分钟,95%CI-110.6至-72.4)。四项研究调查了普萘洛尔在接受分娩的患者中的作用,并且显示分娩时间没有显着减少(MD,-2.98分钟,95%CI-21.6至15.6)。我们的汇总分析表明,与安慰剂相比,在IOL和增强术中使用普萘洛尔与服用普萘洛尔的分娩时间减少有关(平均差异,-46.15分钟,95%CI-59.48至-32.81)。荟萃分析发现PPH的风险没有增加,输血,剖宫产率,或在分娩期间使用普萘洛尔入院NICU。
    结论:在引产期间使用普萘洛尔可将分娩的总时间缩短约91分钟,而在那些接受分娩的患者中,并没有显著缩短分娩时间。
    OBJECTIVE: To assess the effect of propranolol on time to delivery among patients undergoing induction or augmentation of labor.
    METHODS: PubMed, Scopus, Cochrane Library, ClinicalTrials.gov, and CINAHL (EBSCO) were searched from inception to December 2023.
    METHODS: Randomized controlled trials (RCTs) that examined the impact of propranolol on time to delivery among patients undergoing induction or augmentation of labor were included. RCTs that included stillbirth before randomization, non-randomized trials, observational, cohort, case control, or studies in which the control group included an intervention other than standard care were excluded.
    METHODS: Primary outcome was time to delivery after administration of propranolol among patients undergoing induction or augmentation of labor. The summary measures were reported as summary mean difference (MD) or relative risk with 95% of confidence interval (CI).
    RESULTS: Nine RCTs including 1,182 patients were included in this meta-analysis. Five studies investigated the effect of propranolol among patients undergoing induction of labor (IOL) and demonstrated a significant decrease in time to delivery (MD, -91.5 minutes, 95% CI -110.6 to -72.4). Four studies investigated the effect of propranolol among patients undergoing augmentation of labor and showed no significant decrease in time to delivery (MD, -2.98 minutes, 95% CI -21.6 to 15.6). Our pooled analysis demonstrated that the use of propranolol in IOL and augmentation was associated with a decrease in time to delivery from administration of propranolol compared to placebo (mean difference, -46.15 minutes, 95% CI -59.48 to -32.81). The meta-analysis found no increased risk of PPH, blood transfusion, cesarean delivery rates, or NICU admission with the use of propranolol during labor.
    CONCLUSIONS: The use of propranolol during induction of labor shortens overall time to delivery by about 91 minutes and did not significantly decrease time to delivery in those undergoing augmentation of labor.
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  • 文章类型: Journal Article
    诱导在低风险中的作用,活体肾移植接受他克莫司治疗,霉酚酸酯,强的松龙是有争议的。
    这是一项回顾性研究,包括2010年2月至2021年6月期间接受活体肾移植的患者,其中有一个相关的单叶形供者,与他克莫司的维持免疫抑制,霉酚酸酯,和泼尼松龙。高危移植,例如第二次或更多次移植,免疫不相容的移植,和无类固醇的移植,被排除在外。患者分为三组:无诱导,巴利昔单抗诱导,和胸腺球蛋白诱导,并对三者的结局进行了比较.
    总共进行了350次移植。两组之间的受体性别分布(P=0.0373)和抢先移植数量(P=0.0272)存在显着差异。其他参数具有可比性。经活检证实的急性排斥反应(BPAR)在胸腺球蛋白组中的发生率明显低于未诱导组(5.3%vs.17.5%;P=0.0051)或巴利昔单抗(5.3%vs.18.8%;P=0.0054)组。即使在我们进行多元回归分析后,这种情况仍然存在(胸腺球蛋白与无诱导组,P=0.0146;胸腺球蛋白与巴利昔单抗组,P=0.0237)。巴利昔单抗组和非诱导组之间的BPAR没有差异。两组之间的其他结果没有差异。
    在低风险单形模式中,相关,他克莫司活体肾移植,霉酚酸酯,和泼尼松龙,与无诱导或巴利昔单抗诱导相比,胸腺球蛋白的BPAR显着降低,短期患者和死亡审查的移植物存活率和感染率相似。巴利昔单抗没有提供超过无诱导的任何益处。
    UNASSIGNED: The role of induction in low-risk, living-donor kidney transplants being treated with tacrolimus, mycophenolate mofetil, and prednisolone is debatable.
    UNASSIGNED: This was a retrospective study that consisted of patients undergoing living kidney transplantation between February 2010 and June 2021 with a related haplomatch donor, with maintenance immunosuppression of tacrolimus, mycophenolate mofetil, and prednisolone. High-risk transplants, such as second or more transplants, immunologically incompatible transplants, and steroid-free transplants, were excluded. Patients were divided into three groups: no induction, basiliximab induction, and thymoglobulin induction, and the outcomes of all three were compared.
    UNASSIGNED: A total of 350 transplants were performed. There was a significant difference in the recipient sex distribution (P = 0.0373) and the number of preemptive transplants (P = 0.0272) between the groups. Other parameters were comparable. Biopsy-proven acute rejection (BPAR) was significantly less frequent in the thymoglobulin group than in the no-induction (5.3% vs. 17.5%; P = 0.0051) or basiliximab (5.3% vs. 18.8%; P = 0.0054) group. This persisted even after we performed multivariate regression analysis (thymoglobulin vs. no-induction group, P = 0.0146; thymoglobulin vs. basiliximab group, P = 0.0237). There was no difference in BPAR between the basiliximab and no-induction groups. There were no differences in other outcomes between the groups.
    UNASSIGNED: In a low-risk haplomatch, related, living-donor kidney transplant on tacrolimus, mycophenolate mofetil, and prednisolone, BPAR was significantly lower with thymoglobulin as opposed to no induction or basiliximab induction with a similar short-term patient and death-censored graft survival and infection rates. Basiliximab did not provide any benefit over no induction.
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  • 文章类型: Journal Article
    背景:在克罗恩病(CD)的诱导缓解中,诸如专有肠内营养(EEN)等高度限制性饮食疗法的功效已得到证实,然而,存在持续的问题,其适口性差,限制,和坚持。这篇综述的主要目的是评估目前的证据,证明完全固体食物饮食对诱导和维持CD临床和生化缓解的有效性。次要目标包括对内窥镜愈合和生活质量的影响。
    方法:对所有随机对照试验(RCT)的系统评价,对活动性或非活动性克罗恩病患者进行了评估固体食物饮食干预的开放标签随机试验和头对头临床试验.研究包括在基线和随访时具有经过验证的疾病活动指数的成人和儿科患者(HarveyBradshaw指数,HBI;克罗恩病活动指数,CDAI和儿科CDAI,PCDAI)。其他次要终点在研究之间有所不同,包括内窥镜和生化反应,以及生活质量指标。两位作者独立对研究进行了批判性评估,包括研究选择和偏见风险评估。
    结果:14项研究纳入综述,几项研究表明有临床意义的发现。在接受地中海饮食(MD)(中度偏倚风险)的儿科人群中实现了临床缓解。在成年人中,在诱导缓解(中度偏倚风险)方面,克罗恩病排除饮食(CDED)与部分肠内营养(PEN)饮食的CDED相当.低发酵低聚糖,二糖,单糖和多元醇(FODMAP)饮食也被证明可以减少静态或轻度活跃CD(高偏倚风险)患者的症状,然而,这没有得到其他低FODMAP饮食研究的证实.
    结论:MD和CDED在诱导轻度至中度CD的临床缓解方面具有良好的结果。由于设计限制,需要谨慎解释结果,包括合并CD和UC患者结局的问题,样本量小。目前在CD中进行固体食物饮食治疗的证据受到缺乏高质量研究和中等偏倚的限制。未来需要精心设计的研究来证实其疗效。
    BACKGROUND: The efficacy of highly restrictive dietary therapies such as exclusive enteral nutrition (EEN) in the induction of remission in Crohn\'s disease (CD) are well established, however, ongoing issues exist with its poor palatability, restrictions, and adherence. The primary aim of this review is to evaluate the current evidence for the efficacy of exclusively solid food diets on the induction and maintenance of clinical and biochemical remission in CD. Secondary aims include impact on endoscopic healing and quality of life.
    METHODS: A systematic review of all randomised controlled trials (RCTs), open-label randomised trials and head-to-head clinical trials assessing solid food diet intervention in patients with active or inactive Crohn\'s disease was conducted. Studies included adult and paediatric patients with a verified disease activity index at baseline and follow up (Harvey Bradshaw Index, HBI; Crohn\'s disease activity index, CDAI and paediatric CDAI, PCDAI). Additional secondary endpoints varied between studies, including endoscopic and biochemical responses, as well as quality of life measures. Two authors independently performed critical appraisals of the studies, including study selection and risk of bias assessments.
    RESULTS: 14 studies were included for review, with several studies suggesting clinically significant findings. Clinical remission was achieved in a paediatric population undertaking the Mediterranean diet (MD) (moderate risk of bias). In adults, the Crohn\'s disease exclusion diet (CDED) was comparable to the CDED with partial enteral nutrition (PEN) diet in induction of remission (moderate risk of bias). A low fermentable oligosaccharides, disaccharides, monosaccharides and polyols (FODMAP) diet was also shown to decrease symptoms in patients with quiescent or mildly active CD (high risk of bias), however, this was not corroborated by other low FODMAP diet studies.
    CONCLUSIONS: There are promising outcomes for the MD and CDED in inducing clinical remission in mild to moderate CD. The results need to be interpreted with caution due to design limitations, including issues with combining outcomes among CD and UC patients, and small sample size. The current evidence for solid food dietary therapy in CD is limited by the lack of high quality studies and moderate to high bias. Future well designed studies are needed to confirm their efficacy.
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  • 文章类型: Journal Article
    Aficamten,一种小分子选择性心肌肌球蛋白抑制剂,在临床前研究中表征。人血浆中的蛋白质结合为10.4%未结合,并且在物种间范围为1.6%至24.9%未结合。不同物种的血液与血浆比率范围为0.69至1.14。根据在人肝微粒体中观察到的高代谢稳定性,预测人的Aficamten肝清除率较低。Aficanten在Caco-2细胞单层中表现出高渗透性。在小鼠中,Aficamten清除率在物种中很低,分别为8.8、2.1、3.3和11mL/min/kg,rat,狗,猴子,分别。分布体积从低到高,范围从大鼠的0.53到狗的11L/kg。口服生物利用度范围从猴的41%到小鼠的98%。Aficamten在体外代谢为八种代谢物,其中羟基化代谢物M1a和M1b占优势。CYP表型表明多个CYP(2C8,2C9,2D6和3A4)有助于非卡汀的代谢。使用“指数规则”使用4种异速测法预测了人类清除率(1.1mL/min/kg)和分布体积(6.5L/kg)。预测的69小时半衰期与在人1期中观察到的半衰期一致。对于非卡坦汀,没有预测基于CYP的DDI作为沉淀剂的责任。
    Aficamten, a small molecule selective inhibitor of cardiac myosin, was characterised in preclinical in vitro and in vivo studies.Protein binding in human plasma was 10.4% unbound and ranged from 1.6% to 24.9% unbound across species. Blood-to-plasma ratios ranged from 0.69 to 1.14 across species. Aficamten hepatic clearance in human was predicted to be low from observed high metabolic stability in vitro in human liver microsomes. Aficamten demonstrated high permeability in Caco-2 cell monolayers.Aficamten in vivo clearance was low across species at 8.8, 2.1, 3.3, and 11 mL/min/kg in mouse, rat, dog, and monkey, respectively. The volume of distribution was low-to-high ranging from 0.53 in rat to 11 L/kg in dog. Oral bioavailability ranged from 41% in monkey to 98% in mouse.Aficamten was metabolised in vitro to eight metabolites with hydroxylated metabolites M1a and M1b predominating. CYP phenotyping indicated multiple CYPs (2C8, 2C9, 2D6, and 3A4) contributing to the metabolism of aficamten.Human clearance (1.1 mL/min/kg) and volume of distribution (6.5 L/kg) were predicted using 4-species allometry employing \'rule-of-exponents\'. A predicted 69 hour half-life is consistent with observed half-life in human Phase-1.No CYP-based drug-drug interaction liability as a precipitant was predicted for aficamten.
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  • 文章类型: Journal Article
    背景:结膜胎盘是一系列发展成结膜(巩膜)乳头并最终在许多脊椎动物的眼睛中诱导一系列巩膜小骨的胎盘。本研究建立了氢化可的松注射程序(包括。剂量)始终抑制胚胎鸡眼中的所有结膜乳头。这种氢化可的松治疗对细胞凋亡的影响,脉管系统,和胎盘相关基因的表达进行了评估。
    结果:氢化可的松治疗不会增加凋亡性细胞死亡,也不会对眼中的睫状动脉或血管丛产生重大影响。β-catenin和Eda表达水平在氢化可的松治疗后没有显著改变,尽管没有结膜乳头。值得注意的是,Fgf20表达在氢化可的松治疗后显著降低,β-catenin的分布发生了改变。
    结论:我们的研究表明,结膜乳头诱导早在HH27.5(E5.5)开始。氢化可的松治疗可独立于β-连环蛋白和Eda降低Fgf20表达,并且可能会影响Wnt/β-连环蛋白或Eda/Edar途径的其他成员,或者它可能影响形态发生素通过细胞外基质扩散的能力。这项研究有助于在placode发育过程中不断增长的基因表达数据,并增强了我们对某些脊椎动物眼睛如何发育这些迷人骨骼的理解。
    BACKGROUND: Conjunctival placodes are a series of placodes that develop into the conjunctival (scleral) papillae and ultimately induce a series of scleral ossicles in the eyes of many vertebrates. This study establishes a hydrocortisone injection procedure (incl. dosage) that consistently inhibits all conjunctival papillae in the embryonic chicken eye. The effects of this hydrocortisone treatment on apoptosis, vasculature, and placode-related gene expression were assessed.
    RESULTS: Hydrocortisone treatment does not increase apoptotic cell death or have a major effect on the ciliary artery or vascular plexus in the eye. β-catenin and Eda expression levels were not significantly altered following hydrocortisone treatment, despite the absence of conjunctival papillae. Notably, Fgf20 expression was significantly reduced following hydrocortisone treatment, and the distribution of β-catenin was altered.
    CONCLUSIONS: Our study showed that conjunctival papillae induction begins as early as HH27.5 (E5.5). Hydrocortisone treatment reduces Fgf20 expression independently of β-catenin and Eda and may instead affect other members of the Wnt/β-catenin or Eda/Edar pathways, or it may affect the ability of morphogens to diffuse through the extracellular matrix. This study contributes to a growing profile of gene expression data during placode development and enhances our understanding of how some vertebrate eyes develop these fascinating bones.
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  • 文章类型: Journal Article
    背景:初级生产者和细菌之间的共生对于促进宿主生长和生态位适应的营养交换至关重要。然而,感染细菌(噬菌体)的病毒如何影响这些细菌-真核生物的相互作用在很大程度上仍然未知。这里,我们研究了病毒对与中上层马尾藻相关的细菌的基因组多样性和功能适应的作用。在过去的十年中,这种褐藻在大西洋的分布范围急剧增加,并预计将继续扩大,对沿海生态系统造成严重影响,经济,和人类健康。
    结果:我们重建了73个细菌和3963个病毒宏基因组组装的基因组(bMAG和vMAG,分别)来自沿海的SargassumnatansVIII和周围的海水。与海水相比,S.natansVIIIbMAG在原种中富集(28%和0.02%,分别)。红杆菌属和复合球菌bMAG,S.natansVIII微生物组的丰富成员,在藻类和海水之间共享,但在每种环境中都与不同的噬菌体有关。与生物膜形成和群体感应相关的基因在S.natansVIII噬菌体中富集,表明它们可能影响细菌宿主中藻类的结合。从马尾藻表面生物膜中收获的细菌群落并耗尽了游离病毒的体外试验表明,这些细菌受到保护免受海水病毒的裂解感染,但包含完整且可诱导的原种。与海水对照相比,这些细菌在补充马尾藻的海水中生长时形成较厚的生物膜,使用丝裂霉素C进行噬菌体诱导与生物膜形成的显着减少有关。与未诱导的对照相比,诱导的宏基因组富集在分类为温带病毒的基因组序列中。
    结论:我们的数据表明,原虫有助于S.natansVIII相关细菌的灵活基因组。这些预言编码具有共生功能的基因,它们的诱导减少了生物膜的形成,细菌和藻类之间灵活共生的基本能力。这些结果表明,在马尾藻-细菌共生过程中,噬菌体的获取和诱导有助于基因组和功能多样化,对藻类生长有潜在影响。视频摘要。
    BACKGROUND: Symbioses between primary producers and bacteria are crucial for nutrient exchange that fosters host growth and niche adaptation. Yet, how viruses that infect bacteria (phages) influence these bacteria-eukaryote interactions is still largely unknown. Here, we investigate the role of viruses on the genomic diversity and functional adaptations of bacteria associated with pelagic sargassum. This brown alga has dramatically increased its distribution range in the Atlantic in the past decade and is predicted to continue expanding, imposing severe impacts on coastal ecosystems, economies, and human health.
    RESULTS: We reconstructed 73 bacterial and 3963 viral metagenome-assembled genomes (bMAGs and vMAGs, respectively) from coastal Sargassum natans VIII and surrounding seawater. S. natans VIII bMAGs were enriched in prophages compared to seawater (28% and 0.02%, respectively). Rhodobacterales and Synechococcus bMAGs, abundant members of the S. natans VIII microbiome, were shared between the algae and seawater but were associated with distinct phages in each environment. Genes related to biofilm formation and quorum sensing were enriched in S. natans VIII phages, indicating their potential to influence algal association in their bacterial hosts. In-vitro assays with a bacterial community harvested from sargassum surface biofilms and depleted of free viruses demonstrated that these bacteria are protected from lytic infection by seawater viruses but contain intact and inducible prophages. These bacteria form thicker biofilms when growing on sargassum-supplemented seawater compared to seawater controls, and phage induction using mitomycin C was associated with a significant decrease in biofilm formation. The induced metagenomes were enriched in genomic sequences classified as temperate viruses compared to uninduced controls.
    CONCLUSIONS: Our data shows that prophages contribute to the flexible genomes of S. natans VIII-associated bacteria. These prophages encode genes with symbiotic functions, and their induction decreases biofilm formation, an essential capacity for flexible symbioses between bacteria and the alga. These results indicate that prophage acquisition and induction contribute to genomic and functional diversification during sargassum-bacteria symbioses, with potential implications for algae growth. Video Abstract.
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  • 文章类型: Journal Article
    背景:新辅助化疗(NAC)后进行的经口机器人手术(TORS)是晚期口咽癌(OPSCC)的有希望的治疗方法,能够降低辅助治疗的给药速率。
    方法:进行了一项回顾性双中心研究,以分析NAC+TORS与前期TORS患者。使用1:1倾向评分匹配来比较两组。
    结果:在300例III-IV期OPSCC患者中,对204例患者进行匹配,比较NAC+TORS与前期TORS。在两组之间,在复发和RFS生存率方面没有观察到显著差异,操作系统,和DSS。在NAC+TORSp16阳性人群中,由于NAC后病理危险因素的发生频率较低,因此在前期手术队列中,辅助治疗可以节省51%,而在前期手术队列中(p<0.001)为16%.
    结论:对于局部晚期OPSCC,NAC和TORS证明其取得的生存结果不低于前期手术,而在p16阳性人群中,允许显著节省辅助治疗。
    BACKGROUND: Transoral robotic surgery (TORS) performed after neoadjuvant chemotherapy (NAC) is a promising treatment for advanced-stage oropharyngeal carcinoma (OPSCC) able to reduce the adjuvant therapy administration rate.
    METHODS: A retrospective bi-centric study was conducted to analyze NAC + TORS versus upfront TORS patients. A 1:1 propensity score matching was used to compare the two groups.
    RESULTS: Among the 300 patients with stage III-IV OPSCC, 204 patients were matched for comparing NAC + TORS versus upfront TORS. Between the two groups, no significant difference was observed in recurrences and in survival for RFS, OS, and DSS. In the NAC + TORS p16-positive population, adjuvant therapy could be spared in 51% versus 16% in the upfront surgery cohort (p < 0.001) due to the lower frequency of pathological risk factors after NAC.
    CONCLUSIONS: NAC followed by TORS for locoregionally advanced OPSCC demonstrated to achieve non-inferior survival outcomes to upfront surgery, while in the p16-positive population allowed to significantly spare adjuvant therapy.
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  • 文章类型: Journal Article
    准确计算核苷酸中的非共价相互作用能对于理解控制核酸结构和功能的驱动力至关重要。以及开发针对核酸的先进分子力学力场或机器学习潜力。这里,我们将核苷酸结构分解为三个主要成分:核碱基(A,G,C,T,andU),糖部分(核糖和脱氧核糖),和磷酸基团。分析了这些碎片之间以及碎片与水之间的相互作用。比较了不同的量子力学方法捕获相互作用能的准确性。非共价相互作用能被分解成静电,交换排斥,色散,并使用两种从头算方法进行诱导:对称适应微扰理论(SAPT)和绝对定位分子轨道(ALMO)。这些计算为不同的QM方法提供了基准,除了提供了一个有价值的理解的作用的各种分子间力在氢键和芳香堆叠。有了SAPT,更高的理论水平和/或更大的基础集并不一定提供更高的准确性.很难知道哪种组合对于给定系统是最好的。相比之下,ALMOEDA2没有显示出对理论水平或基础集的依赖;此外,它更快。
    Accurate calculation of non-covalent interaction energies in nucleotides is crucial for understanding the driving forces governing nucleic acid structure and function, as well as developing advanced molecular mechanics forcefields or machine learning potentials tailored to nucleic acids. Here, we dissect the nucleotides\' structure into three main constituents: nucleobases (A, G, C, T, and U), sugar moieties (ribose and deoxyribose), and phosphate group. The interactions among these fragments and between fragments and water were analyzed. Different quantum mechanical methods were compared for their accuracy in capturing the interaction energy. The non-covalent interaction energy was decomposed into electrostatics, exchange-repulsion, dispersion, and induction using two ab initio methods: Symmetry-Adapted Perturbation Theory (SAPT) and Absolutely Localized Molecular Orbitals (ALMO). These calculations provide a benchmark for different QM methods, in addition to providing a valuable understanding of the roles of various intermolecular forces in hydrogen bonding and aromatic stacking. With SAPT, a higher theory level and/or larger basis set did not necessarily give more accuracy. It is hard to know which combination would be best for a given system. In contrast, ALMO EDA2 did not show dependence on theory level or basis set; additionally, it is faster.
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  • 文章类型: Journal Article
    酶介导的药代动力学药物-药物相互作用可由药物代谢酶活性的改变引起,主要通过抑制或诱导。我们发现了在药物开发背景下评估这种DDI风险的最新技术详细概述的文献中的差距。本手稿讨论了在药物发现和开发过程中使用的体外和体内方法来预测临床酶介导的DDI,包括清除途径的确定,代谢酶的贡献,以及酶抑制和诱导的机制和动力学。我们讨论了监管指导,并强调了基于生理学的药代动力学模型的实用性,一种在支持监管文件方面继续获得应用和吸引力的方法。展望未来,我们考虑对靶向蛋白质降解物进行DDI风险评估,一种新兴的小分子模式,没有推荐的DDI评估指南。我们撰写本报告的目的是为早期职业研究人员提供酶介导的药代动力学DDI景观的全面视图,以帮助他们的药物开发工作。
    Enzyme-mediated pharmacokinetic drug-drug interactions can be caused by altered activity of drug metabolizing enzymes in the presence of a perpetrator drug, mostly via inhibition or induction. We identified a gap in the literature for a state-of-the art detailed overview assessing this type of DDI risk in the context of drug development. This manuscript discusses in vitro and in vivo methodologies employed during the drug discovery and development process to predict clinical enzyme-mediated DDIs, including the determination of clearance pathways, metabolic enzyme contribution, and the mechanisms and kinetics of enzyme inhibition and induction. We discuss regulatory guidance and highlight the utility of in silico physiologically-based pharmacokinetic modeling, an approach that continues to gain application and traction in support of regulatory filings. Looking to the future, we consider DDI risk assessment for targeted protein degraders, an emerging small molecule modality, which does not have recommended guidelines for DDI evaluation. Our goal in writing this report was to provide early-career researchers with a comprehensive view of the enzyme-mediated pharmacokinetic DDI landscape to aid their drug development efforts.
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