ITGA2

ITGA2
  • 文章类型: Journal Article
    背景:结直肠癌(CRC)是世界上第三大恶性肿瘤。基于5-氟尿嘧啶(5-FU)的化疗是CRC的一线化疗方案,而获得性耐药对治疗CRC患者构成巨大障碍,其机制仍不清楚。因此,鉴定与5-FU化疗相关的基因并寻求二线治疗是改善CRC患者生存和预后的必要手段。
    方法:使用癌症治疗反应门户(CTRP)数据库和癌症药物敏感性基因组学(GDSC)数据库来鉴定CRC相关基因和5-FU耐药CRC的潜在二线治疗。从GEO数据集获得CRC组织的单细胞RNA测序数据。在体外和体内模型中研究了ITGA2和5-FU抗性之间的关系。
    结果:ACOX1和ITGA2被确定为与5-FU耐药相关的风险生物标志物。我们开发了一个风险签名,由ACOX1和ITGA2组成,能够很好地区分5-FU抗性和5-FU敏感性。单细胞测序数据显示,ITGA2主要富集在恶性细胞中。ITGA2与大多数小分子抑制剂的IC50值呈负相关,其中司米替尼的负相关性最高。最后,敲低ITGA2可以使5-FU耐药CRC细胞对5-FU敏感,联合司美替尼可以提高5-FU耐药细胞的治疗效果。
    结论:总之,我们的研究结果证明了ITGA2在增强CRC细胞化疗耐药中的关键作用,并提示司美替尼可以通过抑制ITGA2表达恢复化疗耐药CRC细胞对5-FU的敏感性.
    BACKGROUND: Colorectal cancer (CRC) is the third most malignant tumor in the world. 5-fluorouracil (5‑FU) -based chemotherapy is the first-line chemotherapy scheme for CRC, whereas acquired drug resistance poses a huge obstacle to curing CRC patients and the mechanism is still obscure. Therefore, identification of genes associated with 5‑FU chemotherapy and seeking second-line treatment are necessary means to improve survival and prognosis of patients with CRC.
    METHODS: The Cancer Therapeutics Response Portal (CTRP) database and Genomics of Drug Sensitivity in Cancer (GDSC) database were used to identify CRC-related genes and potential second-line therapies for 5-FU-resistant CRC. The single-cell RNA sequencing data for CRC tissues were obtained from a GEO dataset. The relationship between ITGA2 and 5-FU-resistant was investigated in vitro and in vivo models.
    RESULTS: ACOX1 and ITGA2 were identified as risk biomarkers associated with 5-FU-resistance. We developed a risk signature, consisting of ACOX1 and ITGA2, that was able to distinguish well between 5-FU-resistance and 5-FU-sensitive. The single-cell sequencing data showed that ITGA2 was mainly enriched in malignant cells. ITGA2 was negatively correlated with IC50 values of most small molecule inhibitors, of which selumetinib had the highest negative correlation. Finally, knocking down ITGA2 can make 5-FU-resistant CRC cells sensitive to 5-FU and combining with selumetinib can improve the therapeutic effect of 5-FU resistant cells.
    CONCLUSIONS: In summary, our findings demonstrated the critical role of ITGA2 in enhancing chemotherapy resistance in CRC cells and suggested that selumetinib can restore the sensitivity of chemotherapy-resistant CRC cells to 5-FU by inhibiting ITGA2 expression.
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  • 文章类型: Journal Article
    与发达国家的下降趋势相反,我国宫颈鳞癌的发病率和死亡率均有明显上升。为了提高患者的生存率和生活质量,迫切需要筛选和鉴定可靠的宫颈鳞癌生物标志物和候选药物靶点。在这项研究中,我们证明MUC1在宫颈肿瘤组织中的表达高于非肿瘤组织,MUC1高表达的宫颈鳞状细胞癌患者的总体生存率明显低于MUC1低表达的宫颈鳞状细胞癌患者,表明其对宫颈鳞状细胞癌的早期诊断的潜力。接下来,我们探讨了MUC1在宫颈鳞癌中的调控机制。MUC1可以通过ERK磷酸化上调ITGA2和ITGA3的表达,促进宫颈癌细胞的增殖和转移。进一步敲低ITGA2和ITGA3可显著抑制宫颈癌细胞的肿瘤发生。此外,我们设计了一种包含MUC1-siRNA和一种新型ERK抑制剂的体内联合用药方案,发现这些药物的联合用药在异种移植动物中取得了比单独使用MUC1更好的效果.总的来说,我们发现了一条新的调控途径,MUC1/ERK/ITGA2/3,在宫颈鳞状细胞癌中可能成为未来潜在的生物标志物和治疗靶点。
    MUC1在宫颈鳞状细胞癌中过度表达。MUC1调节ERK磷酸化,并随后上调ITGA2和ITGA3的表达以促进宫颈鳞状细胞癌的肿瘤发生。与单独的MUC1相比,靶向MUC1和ERK的组合药物方案取得了更好的结果。
    In contrast to the decreasing trends in developed countries, the incidence and mortality rates of cervical squamous cell carcinoma in China have increased significantly. The screening and identification of reliable biomarkers and candidate drug targets for cervical squamous cell carcinoma are urgently needed to improve the survival rate and quality of life of patients. In this study, we demonstrated that the expression of MUC1 was greater in neoplastic tissues than in non-neoplastic tissues of the cervix, and cervical squamous cell carcinoma patients with high MUC1 expression had significantly worse overall survival than did those with low MUC1 expression, indicating its potential for early diagnosis of cervical squamous cell carcinoma. Next, we explored the regulatory mechanism of MUC1 in cervical squamous cell carcinoma. MUC1 could upregulate ITGA2 and ITGA3 expression via ERK phosphorylation, promoting the proliferation and metastasis of cervical cancer cells. Further knockdown of ITGA2 and ITGA3 significantly inhibited the tumorigenesis of cervical cancer cells. Moreover, we designed a combination drug regimen comprising MUC1-siRNA and a novel ERK inhibitor in vivo and found that the combination of these drugs achieved better results in animals with xenografts than did MUC1 alone. Overall, we discovered a novel regulatory pathway, MUC1/ERK/ITGA2/3, in cervical squamous cell carcinoma that may serve as a potential biomarker and therapeutic target in the future.
    MUC1 is overexpressed in cervical squamous cell carcinoma. MUC1 regulates ERK phosphorylation, and subsequently upregulates ITGA2 and ITGA3 expression to promote tumorigenesis in cervical squamous cell carcinoma. A combination drug regimen targeting MUC1 and ERK achieved better results compared than MUC1 alone.
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  • 文章类型: Journal Article
    放射治疗是脑恶性神经胶质瘤手术干预后的主要和广泛使用的辅助治疗。然而,由于肿瘤固有的辐射耐受性,患者经常在放射靶区内遇到肿瘤复发和恶性进展,最终屈服于治疗无效。由于缺乏体外模型和与动物模型相关的限制,辐射耐受的精确机制仍然难以捉摸。因此,我们设计了一个3D生物打印的神经胶质瘤模型,表征了体外3D培养的胶质瘤模型的表型特征,并与接受X射线辐射的2D神经胶质瘤模型相比,评估了3D模型的辐射耐受性。通过比较2D和3D胶质瘤模型之间的差异基因表达谱,识别功能基因,并分析基因表达模式的区别,以查明功能基因。相对于2D模型,3D神经胶质瘤模型表现出与基质微环境相关的基因表达的实质性改变,辐射耐受基因ITGA2(整合素亚基A2)显着增加。在3D神经胶质瘤模型中,通过shRNA敲除ITGA2导致神经胶质瘤细胞的辐射耐受性降低,并同时抑制p-AKT途径.总的来说,与2D模型相比,3D生物打印的神经胶质瘤模型忠实地概括了体内肿瘤微环境(TME),并表现出增强的抗辐射能力,通过ITGA2/p-AKT途径介导。该模型代表了研究神经胶质瘤放疗耐受性的优越的体外平台。本文受版权保护。保留所有权利。
    Due to the inherent radiation tolerance, patients who suffered from glioma frequently encounter tumor recurrence and malignant progression within the radiation target area, ultimately succumbing to treatment ineffectiveness. The precise mechanism underlying radiation tolerance remains elusive due to the dearth of in vitro models and the limitations associated with animal models. Therefore, a bioprinted glioma model is engineered, characterized the phenotypic traits in vitro, and the radiation tolerance compared to 2D ones when subjected to X-ray radiation is assessed. By comparing the differential gene expression profiles between the 2D and 3D glioma model, identify functional genes, and analyze distinctions in gene expression patterns. Results showed that 3D glioma models exhibited substantial alterations in the expression of genes associated with the stromal microenvironment, notably a significant increase in the radiation tolerance gene ITGA2 (integrin subunit A2). In 3D glioma models, the knockdown of ITGA2 via shRNA resulted in reduced radiation tolerance in glioma cells and concomitant inhibition of the p-AKT pathway. Overall, 3D bioprinted glioma model faithfully recapitulates the in vivo tumor microenvironment (TME) and exhibits enhanced resistance to radiation, mediated through the ITGA2/p-AKT pathway. This model represents a superior in vitro platform for investigating glioma radiotherapy tolerance.
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  • 文章类型: Journal Article
    骨关节炎(OA)是常见的,受多种因素影响,比如年龄,体重,性别,和遗传学。OA的发病机制尚不清楚。因此,使用碘乙酸钠(MIA)诱导的OA的大鼠模型,我们使用甲基-seq检查了全基因组DNA甲基化,并使用RNA-seq对阴性对照(NC)和MIA诱导的大鼠关节软骨组织中的转录组进行了表征。我们在OA中鉴定了受DNA甲基化调控的170个基因(100个低甲基化和上调基因和70个高甲基化和下调基因)。DNA甲基化调节基因的功能与粘着斑相关,细胞外基质(ECM)-受体相互作用以及PI3K-Akt和Hippo信号通路。与细胞外基质组织有关的功能,细胞外基质蛋白聚糖,骨胶原的形成与OA有关。使用甲基化表达相关基因构建了分子和蛋白质-蛋白质网络。Erk1/2是OA诱导的DNA甲基化和RNA表达变化的下游靶标。我们发现整合素亚基α2(ITGA2)基因在粘着斑,α6-β4整合素信号传导,和OA中的炎症反应通路。总的来说,基因表达变化,因为DNA甲基化影响OA的发病机制。ITGA2,其基因表达变化在OA发病过程中受到DNA甲基化的调控,是一个候选基因。我们的发现为大鼠OA过程的表观遗传靶标提供了见解。
    Osteoarthritis (OA) is common and affected by several factors, such as age, weight, sex, and genetics. The pathogenesis of OA remains unclear. Therefore, using a rat model of monosodium iodoacetate (MIA)-induced OA, we examined genomic-wide DNA methylation using methyl-seq and characterized the transcriptome using RNA-seq in the articular cartilage tissue from a negative control (NC) and MIA-induced rats. We identified 170 genes (100 hypomethylated and upregulated genes and 70 hypermethylated and downregulated genes) regulated by DNA methylation in OA. DNA methylation-regulated genes were enriched in functions related to focal adhesion, extracellular matrix (ECM)-receptor interaction and the PI3K-Akt and Hippo signaling pathways. Functions related to extracellular matrix organization, extracellular matrix proteoglycans, and collagen formation were involved in OA. A molecular and protein-protein network was constructed using methylated expression-correlated genes. Erk1/2 was a downstream target of OA-induced changes in DNA methylation and RNA expression. We found that the integrin subunit alpha 2 (ITGA2) gene is important in focal adhesion, alpha6-beta4 integrin signaling, and the inflammatory response pathway in OA. Overall, gene expression changes because DNA methylation influences OA pathogenesis. ITGA2, whose gene expression changes are regulated by DNA methylation during OA onset, is a candidate gene. Our findings provide insights into the epigenetic targets of OA processes in rats.
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  • 文章类型: Journal Article
    胶质瘤是成年人中最常见的恶性脑肿瘤,死亡率和复发率高。整合素α2(ITGA2)参与细胞粘附,干细胞调节,血管生成和免疫细胞功能。ITGA2在胶质瘤恶性侵袭中的作用尚不清楚。通过生物信息学数据库分析ITGA2的功能和临床相关性。流式细胞术和免疫荧光双染色法检测亲代细胞和GSCs中ITGA2的表达。通过干细胞功能测定和Westernblot鉴定了ITGA2在GSCs恶性表型和上皮间质转化(EMT)中的作用。通过颅内原位异种移植模型确定ITGA2对体内神经胶质瘤进展的影响。免疫组织化学,采用Spearman相关和Kaplan-Meier分析ITGA2与胶质瘤临床特征及预后的关系。生物学分析表明ITGA2可能与细胞侵袭和迁移有关。富含GSCs并与SOX2共表达的ITGA2通过激活STAT3磷酸化和增强EMT促进GSCs的侵袭和迁移。ITGA2敲除抑制了颅内原位异种移植物的生长并延长了异种移植物小鼠的存活。此外,ITGA2的表达水平与肿瘤的恶性程度显著相关,N-cadherin和Ki67。ITGA2高表达提示胶质瘤患者预后较差。作为预测预后的生物标志物,ITGA2通过激活STAT3磷酸化和增强EMT促进GSCs的恶性侵袭,导致肿瘤复发和预后不良。
    Glioma is the most common malignant brain tumor in adults with a high mortality and recurrence rate. Integrin alpha 2 (ITGA2) is involved in cell adhesion, stem cell regulation, angiogenesis and immune cell function. The role of ITGA2 in glioma malignant invasion remains unknown. The function and clinical relevance of ITGA2 were analysed by bioinformatics databases. The expression of ITGA2 in parent cells and GSCs was detected by flow cytometry and immunofluorescence double staining. The role of ITGA2 on the malignant phenotype of GSCs and epithelial-mesenchymal transition (EMT) was identified by stem cell function assays and Western blot. The effect of ITGA2 on glioma progression in vivo was determined by the intracranial orthotopic xenograft model. Immunohistochemistry, Spearman correlation and Kaplan-Meier were used to analyse the relationship of ITGA2 with clinical features and glioma prognosis. Biological analysis showed that ITGA2 might be related to cell invasion and migration. ITGA2, enriched in GSCs and co-expressed with SOX2, promoted the invasion and migration of GSCs by activating STAT3 phosphorylation and enhancing EMT. ITGA2 knockout suppressed the intracranial orthotopic xenograft growth and prolonged the survival of xenograft mice. In addition, the expression level of ITGA2 was significantly correlated to the grade of malignancy, N-cadherin and Ki67. High expression of ITGA2 indicated a worse prognosis of glioma patients. As a biomarker for the prediction of prognosis, ITGA2 promotes the malignant invasion of GSCs by activating STAT3 phosphorylation and enhancing EMT, leading to tumor recurrence and poor prognosis.
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  • 文章类型: Journal Article
    胰腺癌的特征是预后不良,被认为是最可怕的恶性肿瘤之一。在不同肿瘤组织中显示高表达的基因中,ITGA2是癌症治疗的有希望的候选者。在胰腺癌中促进癌症是无效的。这项研究的目的是评估胰腺癌中ITGA2,EMT和PD-L1的存在。
    我们检查了ITGA2,MET,E-cadherin,使用多组织免疫荧光和免疫组织化学技术在62个胰腺癌组织样本中的PD-L1,CD4和CD8蛋白。功能测定,如细胞迁移测定和transwell测定,用于确定ITGA2在胰腺癌中的生物学作用。使用Westernblot分析和RT-qPCR检测ITGA2,EMT和PD-L1的关系。
    在我们的研究中,我们观察到ITGA2,E-cadherin,PD-L1在胰腺癌肿瘤和间质组织中的表达。此外,ITGA2、E-cadherin、和PD-L1在肿瘤区域(r=0.559,P<0.001和r=0.511,P<0.001),间质区PD-L1(r=0.512,P<0.001)。胰腺癌组织中ITGA2、CD4和CD8的表达水平高于癌旁组织(P<0.05)。此外,ITGA2与CD4、CD8呈负相关(r=-0.344,P<0.005,r=-0.398,P<0.005)。此外,发现ITGA2、CD4和CD8与患者的生存时间相关(P<0.05)。阻断ITGA2显著抑制胰腺癌细胞的增殖和侵袭能力,此外,sh-ITGA2可以下调EMT和PD-L1的表达。
    我们发现了一种新的机制,其中ITGA2在调节胰腺癌的生长和侵袭中起着至关重要的作用。该机制涉及胰腺癌细胞中MET和PD-L1表达的上调。此外,我们发现,在胰腺癌患者中,ITGA2表达增加与预后不良相关.此外,ITGA2也影响这些患者的免疫调节。因此,靶向ITGA2是增强检查点免疫疗法疗效和阻止肿瘤生长的有效方法。
    Pancreatic cancer is characterized by a grim prognosis and is regarded as one of the most formidable malignancies. Among the genes exhibiting high expression in different tumor tissues, ITGA2 stands out as a promising candidate for cancer therapy. The promotion of cancer in pancreatic cancer is not effective. The objective of this study is to assess the presence of ITGA2, EMT and PD-L1 in pancreatic cancer.
    We examined the expression of ITGA2, MET, E-cadherin, PD-L1, CD4, and CD8 proteins in 62 pancreatic cancer tissue samples using multi-tissue immunofluorescence and immunohistochemistry techniques. Functional assays, such as the cell migration assay and transwell assay, were used to determine the biological role of ITGA2 in pancreatic cancer. The relationship of ITGA2,EMT and PD-L1 were examined using Western blot analysis and RT-qPCR assay.
    In our study, we observed the expression of ITGA2, E-cadherin, and PD-L1 in both tumor and stroma tissues of pancreatic cancer. Additionally, a positive correlation between ITGA2, E-cadherin, and PD-L1 in the tumor region (r=0.559, P<0.001 and r=0.511, P<0.001), and PD-L1 in the stroma region (r=0.512, P<0.001).The expression levels of ITGA2, CD4, and CD8 were found to be higher in pancreatic cancer tissues compared to adjacent tissues (P < 0.05). Additionally, ITGA2 was negatively correlated with CD4 and CD8 (r = -0.344, P < 0.005 and r = -0.398, P < 0.005).Furthermore, ITGA2, CD4, and CD8 were found to be correlated with the survival time of patients (P < 0.05). Blocking ITGA2 inhibited the proliferation and invasion ability of pancreatic cancer cells significantly, Additionally, sh-ITGA2 can down-regulate the expression of EMT and PD-L1.
    We identified a novel mechanism in which ITGA2 plays a crucial role in the regulation of pancreatic cancer growth and invasion. This mechanism involves the upregulation of MET and PD-L1 expression in pancreatic cancer cells. Additionally, we found that increased expression of ITGA2 is associated with a poor prognosis in pancreatic cancer patients. Furthermore, ITGA2 also affects immune regulation in these patients. Therefore, targeting ITGA2 is an effective method to enhance the efficacy of checkpoint immunotherapy and prohibiting tumor growth against pancreatic cancer.
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  • 文章类型: Journal Article
    本研究旨在描述整合素α2(ITGA2)在非小细胞肺癌(NSCLC)细胞免疫逃逸中的机制和功能作用。生物信息学分析用于分析ITGA2在NSCLC组织中的表达,ITGA2表达与患者生存时间的相关性,ITGA2表达和PD-L1(CD274)表达,和ITGA2表达和CD8+T细胞浸润。qRT-PCR检测ITGA2表达。透射电子显微镜用于检查外泌体的形态,蛋白质印迹检测CD9、CD63和PD-L1水平。CCK-8测量细胞活力。细胞毒性实验测定了CD8+T细胞对癌细胞的杀伤作用。酶联免疫吸附测定(ELISA)评估L-2,IFN-γ,TNF-α,和外泌体中PD-L1的表达。免疫组织化学(IHC)检测患者组织样品中的ITGA2、CD8和PD-L1表达。ITGA2在NSCLC中高表达,Pearson相关分析显示,ITGA2与CD8+T细胞浸润呈负相关,与PD-L1表达呈正相关。细胞实验显示沉默ITGA2阻碍NSCLC细胞进展和CD8+T细胞分泌因子水平升高。进一步的机制研究发现,ITGA2通过增加PD-L1表达降低CD8+T细胞介导的抗肿瘤免疫。临床样品测试揭示了ITGA2在NSCLC组织中上调。从患者血液中分离的外泌体中观察到PD-L1上调,相关性分析显示,外泌体PD-L1在血液中的表达与组织中ITGA2的表达呈正相关。本研究显示了ITGA2在NSCLC免疫逃逸中的新机制和作用,为非小细胞肺癌患者的临床治疗提供指导。
    This study intended to delineate the mechanism and functional role of integrin α2 (ITGA2) in non-small-cell lung cancer (NSCLC) cell immune escape. Bioinformatics analysis was utilized to analyze ITGA2 expression in NSCLC tissues, and correlations between ITGA2 expression and patient survival time, ITGA2 expression and programmed cell death ligand 1 (PD-L1; CD274) expression, and ITGA2 expression and CD8+ T-cell infiltration. Quantitative real-time polymerase chain reaction detected ITGA2 expression. Transmission electron microscopy was applied to examine the morphology of exosomes, and western blot measured CD9, CD63, and PD-L1 levels. CCK-8 measured cell viability. Cell toxicity experiment measured the killing effect of CD8+ T cells on cancer cells. Enzyme-linked immunosorbent assay assessed secretion levels of interleukin-2, interferon-gamma, tumor necrosis factor-alpha, and PD-L1 expression in exosomes. Immunohistochemistry detected ITGA2, CD8, and PD-L1 expression in patient tissue samples. ITGA2 was highly expressed in NSCLC, and Pearson correlation analysis showed a negative correlation of ITGA2 with CD8+ T-cell infiltration and a positive correlation of ITGA2 with PD-L1 expression. Cell experiments showed that silencing ITGA2 hindered NSCLC cell progression and increased levels of CD8+ T-cell secretory factors. Further mechanism studies found that ITGA2 reduced CD8+ T-cell-mediated antitumor immunity via the increase in PD-L1 expression. Clinical sample testing unveiled that ITGA2 was upregulated in NSCLC tissues. PD-L1 upregulation was seen in exosomes separated from patient blood, and correlation analysis showed a positive correlation of exosomal PD-L1 expression in blood with ITGA2 expression in tissues. This study displays a novel mechanism and role of ITGA2 in NSCLC immune escape, providing directions for the clinical therapy of NSCLC patients.
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  • 文章类型: Journal Article
    背景:胰腺导管腺癌(PDAC)是一种恶性肿瘤,其特征是具有挑战性的早期诊断和不良预后。认为凝血对PDAC的肿瘤微环境有影响。这项研究的目的是进一步区分凝血相关基因并研究PDAC中的免疫浸润。
    方法:我们从KEGG数据库收集了凝血相关基因的两种亚型,并从癌症基因组图谱(TCGA)数据库中获得PDAC的转录组测序数据和临床信息。使用无监督聚类方法,我们将患者分为不同的组.我们调查了突变频率以探索基因组特征并进行富集分析,利用基因本体论(GO)和京都基因百科全书(KEGG)探索通路。应用BERSORTCI剖析肿瘤免疫浸润与两簇的关系。建立了风险分层的预后模型,并建立列线图以帮助确定风险评分.对免疫疗法的反应使用IMsporyp210队列进行评估。最后,招募PDAC患者,并收集实验样本以使用免疫组织化学验证中性粒细胞的浸润。此外,并通过分析单细胞测序数据来鉴定ITGA2的表达和功能。
    结果:根据PDAC患者中存在的凝血途径建立了两个凝血相关的簇。功能富集分析揭示了两个簇中的不同途径。约49.4%的PDAC患者发生凝血相关基因的DNA突变。两组患者在免疫细胞浸润方面表现出显著差异,免疫检查点,肿瘤微环境和TMB。我们通过LASSO分析建立了4基因预后分层模型。根据风险评分,列线图可以准确预测PDAC患者的预后。我们将ITGA2鉴定为hub基因,这与不良的总生存期(OS)和短的无病生存期(DFS)有关。单细胞测序分析表明ITGA2在PDAC中由导管细胞表达。
    结论:我们的研究证明了凝血相关基因与肿瘤免疫微环境之间的相关性。分层模型可以预测预后和计算药物治疗的益处,从而为临床个性化治疗提供建议。
    BACKGROUND: Pancreatic ductal adenocarcinoma (PDAC) is a malignancy characterized by challenging early diagnosis and poor prognosis. It is believed that coagulation has an impact on the tumor microenvironment of PDAC. The aim of this study is to further distinguish coagulation-related genes and investigate immune infiltration in PDAC.
    METHODS: We gathered two subtypes of coagulation-related genes from the KEGG database, and acquired transcriptome sequencing data and clinical information on PDAC from The Cancer Genome Atlas (TCGA) database. Using an unsupervised clustering method, we categorized patients into distinct clusters. We investigated the mutation frequency to explore genomic features and performed enrichment analysis, utilizing Gene Ontology (GO) and Kyoto Encyclopedia of Genes (KEGG) to explore pathways. CIBERSORT was used to analyze the relationship between tumor immune infiltration and the two clusters. A prognostic model was created for risk stratification, and a nomogram was established to assist in determining the risk score. The response to immunotherapy was assessed using the IMvigor210 cohort. Finally, PDAC patients were recruited, and experimental samples were collected to validate the infiltration of neutrophils using immunohistochemistry. In addition, and identify the ITGA2 expression and function were identified by analyzing single cell sequencing data.
    RESULTS: Two coagulation-related clusters were established based on the coagulation pathways present in PDAC patients. Functional enrichment analysis revealed different pathways in the two clusters. Approximately 49.4% of PDAC patients experienced DNA mutation in coagulation-related genes. Patients in the two clusters displayed significant differences in terms of immune cell infiltration, immune checkpoint, tumor microenvironment and TMB. We developed a 4-gene prognostic stratified model through LASSO analysis. Based on the risk score, the nomogram can accurately predict the prognosis in PDAC patients. We identified ITGA2 as a hub gene, which linked to poor overall survival (OS) and short disease-free survival (DFS). Single-cell sequencing analysis demonstrated that ITGA2 was expressed by ductal cells in PDAC.
    CONCLUSIONS: Our study demonstrated the correlation between coagulation-related genes and the tumor immune microenvironment. The stratified model can predict the prognosis and calculate the benefits of drug therapy, thus providing the recommendations for clinical personalized treatment.
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  • 文章类型: Journal Article
    BACH1在促进癌症中起着重要作用。本研究旨在进一步验证BACH1表达水平与肺腺癌预后的关系,以及BACH1表达对肺腺癌的影响和可能的机制。采用肺腺癌组织芯片分析结合生物信息学方法评价BACH1在肺腺癌中的表达水平及其与预后的关系。通过基因敲低和过表达来研究BACH1在肺腺癌细胞中的功能和分子机制。通过生物信息学和RNA测序数据分析探索BACH1在肺腺癌细胞中的调控下游通路和靶基因,实时PCR,蛋白质印迹分析,和细胞免疫荧光和细胞粘附测定。进行染色质免疫沉淀和双荧光素酶报告基因测定以验证靶基因结合位点。在本研究中,BACH1在肺腺癌组织中异常高表达,BACH1高表达与患者预后呈负相关。BACH1促进肺腺癌细胞的迁移和侵袭。机械上,BACH1直接与ITGA2启动子的上游序列结合,促进ITGA2的表达,BACH1-ITGA2轴通过激活FAK-RAC1-PAK信号通路参与肺腺癌细胞的细胞骨架调节。我们的结果表明,BACH1通过转录机制正向调节ITGA2的表达,从而激活FAK-RAC1-PAK信号通路参与肿瘤细胞骨架的形成,进而促进肿瘤细胞的迁移和侵袭。
    BACH1 plays an important role in promoting cancer. This study aims to further verify the relationship between the expression level of BACH1 in lung adenocarcinoma prognosis, as well as the influence of BACH1 expression on lung adenocarcinoma and the potential mechanism. The expression level of BACH1 in lung adenocarcinoma and its relationship with prognosis was evaluated by lung adenocarcinoma tissue microarray analysis combined with bioinformatics approaches. Gene knockdown and overexpression were used to investigate the functions and molecular mechanisms of BACH1 in lung adenocarcinoma cells. The regulatory downstream pathways and target genes of BACH1 in lung adenocarcinoma cells were explored by bioinformatics and RNA sequencing data analysis, real-time PCR, western blot analysis, and cell immunofluorescence and cell adhesion assays. Chromatin immunoprecipitation and dual-luciferase reporter assays were carried out to verify the target gene binding site. In the present study, BACH1 is abnormally highly expressed in lung adenocarcinoma tissues, and high BACH1 expression is negatively correlated with patient prognosis. BACH1 promotes the migration and invasion of lung adenocarcinoma cells. Mechanistically, BACH1 directly binds to the upstream sequence of the ITGA2 promoter to promote ITGA2 expression, and the BACH1-ITGA2 axis is involved in cytoskeletal regulation in lung adenocarcinoma cells by activating the FAK-RAC1-PAK signaling pathway. Our results indicated that BACH1 positively regulates the expression of ITGA2 through a transcriptional mechanism, thereby activating the FAK-RAC1-PAK signaling pathway to participate in the formation of the cytoskeleton in tumor cells and then promoting the migration and invasion of tumor cells.
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  • 文章类型: Journal Article
    卵巢癌是经常表现出广泛的腹膜播散的转移性疾病。最近的研究表明,肿瘤微环境中的非癌细胞,如巨噬细胞和间皮细胞,可能在卵巢癌转移中起作用。在这项研究中,我们发现,与未刺激的对照Met5A细胞相比,人卵巢癌细胞(A2780和SKOV3)更多地粘附于巨噬细胞刺激的人间皮Met5A细胞(M-Met5A).mRNA测序显示94个粘附相关基因,包括FMN1、ITGA2、COL13A1、VEGFC、和NRG1在M-Met5A细胞中显著上调。敲除M-Met5A细胞中ITGA2和VEGFC显著抑制卵巢癌细胞的粘附。JNK和Akt信号通路的抑制抑制了ITGA2和VEGFC在M-Met5A细胞中的表达以及卵巢癌-间皮细胞粘附。此外,巨噬细胞增加了CC趋化因子配体2(CCL2)和CCL5的产生,从而提高了卵巢癌-间皮细胞的粘附力。这些发现暗示巨噬细胞可能通过JNK和Akt途径诱导粘附相关基因的间皮表达,在卵巢癌-间皮细胞粘附中起重要作用。
    Ovarian cancer is a metastatic disease that frequently exhibits extensive peritoneal dissemination. Recent studies have revealed that noncancerous cells inside the tumor microenvironment, such as macrophages and mesothelial cells, may play a role in ovarian cancer metastasis. In this study, we found that human ovarian cancer cells (A2780 and SKOV3) adhered more to human mesothelial Met5A cells stimulated by macrophages (M-Met5A) in comparison to unstimulated control Met5A cells. The mRNA sequencing revealed that 94 adhesion-related genes, including FMN1, ITGA2, COL13A1, VEGFC, and NRG1, were markedly upregulated in M-Met5A cells. Knockdown of ITGA2 and VEGFC in M-Met5A cells significantly inhibited the adhesion of ovarian cancer cells. Inhibition of the JNK and Akt signaling pathways suppressed ITGA2 and VEGFC expression in M-Met5A cells as well as ovarian cancer-mesothelial cell adhesion. Furthermore, increased production of CC chemokine ligand 2 (CCL2) and CCL5 by macrophages elevated ovarian cancer-mesothelial cell adhesion. These findings imply that macrophages may play a significant role in ovarian cancer-mesothelial cell adhesion by inducing the mesothelial expression of adhesion-related genes via the JNK and Akt pathways.
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