IFT

IFT
  • 文章类型: Journal Article
    视觉的第一步发生在感光细胞的睫状外段隔室中。外节段的蛋白质组成独特地适合于执行该功能。这些蛋白质中最丰富的是视觉色素,视紫红质,其外段贩运涉及滑膜内运输(IFT)。这里,我们报告了对小鼠的分析的三个主要发现,其中有条件的IFT-B亚基敲除会严重损害纤毛运输。首先,我们证明了一种分选机制的存在,其中错误定位的视紫红质在释放之前被募集并集中在细胞外囊泡中,可能是为了保护细胞免受蛋白质错位的不利影响。第二,减少视紫红质的表达显着延迟由IFT破坏引起的光感受器变性,提示控制视紫红质水平可能是一些视网膜退行性疾病的有效治疗方法。最后,IFT-B亚基的丢失并不能概括在BBSome(另一种依赖IFT的纤毛转运蛋白复合物)突变体中观察到的表型,其中非纤毛蛋白在外部片段中积累。尽管人们普遍认为BBSome的作用主要是参与纤毛运输,我们的数据表明,BBSome具有另一个独立于IFT的主要功能,可能与维持睫状过渡区的扩散屏障有关。
    The first steps of vision take place in the ciliary outer segment compartment of photoreceptor cells. The protein composition of outer segments is uniquely suited to perform this function. The most abundant among these proteins is the visual pigment, rhodopsin, whose outer segment trafficking involves intraflagellar transport (IFT). Here, we report three major findings from the analysis of mice in which ciliary transport was acutely impaired by conditional knockouts of IFT-B subunits. First, we demonstrate the existence of a sorting mechanism whereby mislocalized rhodopsin is recruited to and concentrated in extracellular vesicles prior to their release, presumably to protect the cell from adverse effects of protein mislocalization. Second, reducing rhodopsin expression significantly delays photoreceptor degeneration caused by IFT disruption, suggesting that controlling rhodopsin levels may be an effective therapy for some cases of retinal degenerative disease. Last, the loss of IFT-B subunits does not recapitulate a phenotype observed in mutants of the BBSome (another ciliary transport protein complex relying on IFT) in which non-ciliary proteins accumulate in the outer segment. Whereas it is widely thought that the role of the BBSome is to primarily participate in ciliary transport, our data suggest that the BBSome has another major function independent of IFT and possibly related to maintaining the diffusion barrier of the ciliary transition zone.
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  • 文章类型: Journal Article
    低盐度水驱(LSWF)是一种旨在改变岩石与流体之间的相互作用的技术,特别是改变润湿性并降低界面张力(IFT)。然而,关于异质润湿性和初始水饱和度(Swi)的存在如何影响LSWF的有效性的理解仍然有限。这项研究有助于在异质润湿性的背景下更深入地了解LSWF机制,同时也考虑Swi。模拟是使用OpenFOAM进行的,采用非反应性准三相流求解器,该求解器考虑了低盐度(LSW)和高盐度水(HSW)混合过程中的润湿性改变和IFT降低。设计了异质孔隙几何形状,模拟了四个不同的场景,考虑到Swi的存在,同时涵盖异质和均匀的润湿性条件。这些情景包括二次高盐度水淹(HSWF),三级和二级LSWF。值得注意的是,模拟显示,二级LSWF在所有情况下始终产生最高的石油采收率,达到96.98%的回收率。此外,Swi的存在显著影响LSWF在采油方面的性能,特别是在不均匀的润湿性条件下,它可以提高高达3.5%的回收率,但是在均匀的润湿性中,它使回收率降低了近26%。这些模拟还强调了石油和HSW相的分布在深刻影响LSWF结果方面所起的关键作用。
    Low-Salinity Water Flooding (LSWF) is a technique aimed at modifying the interactions between rock and fluids particularly altering wettability and reducing interfacial tension (IFT). However, there remains limited understanding of how heterogeneous wettability and the presence of Initial Water Saturation (Swi) can impact the effectiveness of LSWF. This study contributes to a deeper understanding of LSWF mechanisms in the context of heterogeneous wettability, while also considering Swi. The simulations were conducted using OpenFOAM, employing a non-reactive quasi-three-phase flow solver that accounts for wettability alteration and IFT reduction during the mixing of Low-Salinity (LSW) and High-Salinity Water (HSW). A heterogeneous pore geometry is designed, and four distinct scenarios are simulated, encompassing both heterogeneous and homogeneous wettability conditions while considering the presence of Swi. These scenarios included secondary High-Salinity Water Flooding (HSWF), tertiary and secondary LSWF. Notably, the simulations reveal that secondary LSWF consistently yields the highest oil recovery across all scenarios, achieving recovery rates of up to 96.98 %. Furthermore, the presence of Swi significantly influences the performance of LSWF in terms of oil recovery, particularly in heterogeneous wettability conditions where it boosts recovery by up to 3.5 %, but in homogeneous wettability, it decreases recovery by nearly 26 %. These simulations also underscore the pivotal role played by the distribution of oil and HSW phases in profoundly affecting the outcomes of LSWF.
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  • 文章类型: Journal Article
    纤毛组装需要步行内运输(IFT)。IFT机械包括IFT马达驱动蛋白-2和IFT动力蛋白加上IFT-A和IFT-B复合物,它们在纤毛中组装成IFT列车。为了获得对IFT和纤毛组装的机械理解,我们对纤毛衣藻的IFT机制进行了绝对定量。每个纤毛大约有756、532、276、350个IFT-B分子,IFT-A,IFT动力蛋白和驱动蛋白-2。IFT-B的量足以维持微管蛋白递送方面的快速纤毛生长。IFT-B/IFT-A/动力蛋白的化学计量比约为3:2:1,而IFT动力蛋白突变体中的IFT-B/IFT-A比为2:1,表明IFT-A和IFT-B之间的塑性相互作用可能受IFT动力蛋白的影响。考虑到驱动蛋白-2在逆行IFT过程中的扩散,据估计,在顺行IFT过程中,一个驱动蛋白2驱动八个IFT-B分子。这些数据为IFT列车和纤毛组件的组装提供了新的见解。
    Intraflagellar transport (IFT) is required for ciliary assembly. The IFT machinery comprises the IFT motors kinesin-2 and IFT dynein plus IFT-A and IFT-B complexes, which assemble into IFT trains in cilia. To gain mechanistic understanding of IFT and ciliary assembly, here, we performed an absolute quantification of IFT machinery in Chlamydomonas reinhardtii cilium. There are ∼756, ∼532, ∼276 and ∼350 molecules of IFT-B, IFT-A, IFT dynein and kinesin-2, respectively, per cilium. The amount of IFT-B is sufficient to sustain rapid ciliary growth in terms of tubulin delivery. The stoichiometric ratio of IFT-B:IFT-A:dynein is ∼3:2:1 whereas the IFT-B:IFT-A ratio in an IFT dynein mutant is 2:1, suggesting that there is a plastic interaction between IFT-A and IFT-B that can be influenced by IFT dynein. Considering diffusion of kinesin-2 during retrograde IFT, it is estimated that one kinesin-2 molecule drives eight molecules of IFT-B during anterograde IFT. These data provide new insights into the assembly of IFT trains and ciliary assembly.
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  • 文章类型: Journal Article
    在提高采收率(EOR)工艺中,界面张力(IFT)对渣油采收率的影响已成为影响渣油采收率的关键因素。表面活性剂和生物表面活性剂的使用可以降低IFT并通过降低IFT来提高石油采收率。原油中的沥青质具有作为表面活性材料的结构能力。在微生物强化采油(MEOR)中,生物表面活性剂生产,即使是少量的,是降低IFT的重要机制。本研究旨在通过使用NaCl结合低生物表面活性剂值和低盐度水研究流体/流体相互作用,浓度为0、1000和5000ppm的MgCl2和CaCl2盐,还有嗜热脂肪地芽孢杆菌.通过评估IFT,这项研究调查了0、1和5wt的不同百分比。%的不同沥青质,其中含水体积含有低盐度水及其与细菌的组合。结果表明,嗜热G.Stearothermophilus导致了生物表面活性剂的形成,导致酸性和碱性沥青质的IFT减少。此外,在酸性和碱性条件下,沥青质与嗜热G.Stearothermophilus之间的相互作用表明,在酸性和碱性条件下,IFT均降低。此外,研究发现,酸性沥青质与嗜热硬脂酵母之间的相互作用,在CaCl2,NaCl,和MgCl2盐,导致在两个相的界面处形成更多的生物表面活性剂和固有表面活性剂,与涉及碱性沥青质的相互作用相反。这些发现强调了沥青质和G.Stearothermophilus之间相互作用的依赖性,盐,和细菌对沥青质的具体类型和浓度。
    In the enhanced oil recovery (EOR) process, interfacial tension (IFT) has become a crucial factor because of its impact on the recovery of residual oil. The use of surfactants and biosurfactants can reduce IFT and enhance oil recovery by decreasing it. Asphaltene in crude oil has the structural ability to act as a surface-active material. In microbial-enhanced oil recovery (MEOR), biosurfactant production, even in small amounts, is a significant mechanism that reduces IFT. This study aimed to investigate fluid/fluid interaction by combining low biosurfactant values and low-salinity water using NaCl, MgCl2, and CaCl2 salts at concentrations of 0, 1000, and 5000 ppm, along with Geobacillus stearothermophilus. By evaluating the IFT, this study investigated different percentages of 0, 1, and 5 wt.% of varying asphaltene with aqueous bulk containing low-salinity water and its combination with bacteria. The results indicated G. Stearothermophilus led to the formation of biosurfactants, resulting in a reduction in IFT for both acidic and basic asphaltene. Moreover, the interaction between asphaltene and G. Stearothermophilus with higher asphaltene percentages showed a decrease in IFT under both acidic and basic conditions. Additionally, the study found that the interaction between acidic asphaltene and G. stearothermophilus, in the presence of CaCl2, NaCl, and MgCl2 salts, resulted in a higher formation of biosurfactants and intrinsic surfactants at the interface of the two phases, in contrast to the interaction involving basic asphaltene. These findings emphasize the dependence of the interactions between asphaltene and G. Stearothermophilus, salt, and bacteria on the specific type and concentration of asphaltene.
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  • 文章类型: Journal Article
    目的:术中筋膜牵引(IFT)治疗大型腹侧疝和网域缺失(LOD)疝是腹壁手术中一种有前途的工具。然而,关于肌筋膜前移的增加程度知之甚少,尤其是前直肌鞘。我们,因此,使用尸体模型来确定IFT过程中的中介。
    方法:使用4份新鲜冷冻标本。进行肌肉后准备,然后通过对角线垂直牵引进行IFT30分钟。在15和30分钟以及牵引力后测量前直肌鞘的内侧前进。
    结果:IFT30分钟后,前直肌鞘的总介质为10.5cm(平均)。平均牵引力为16.28kg。在垂直筋膜牵引的前15分钟内,总的内在化程度明显更高(p<0.05)。
    结论:IFT为尸体模型中前直肌鞘提供了显着的中介作用。研究结果与回顾性案例研究的结果一致。因此,我们将IFT视为腹壁手术中的有益工具。
    OBJECTIVE: Intraoperative fascial traction (IFT) for the treatment of large ventral hernias and loss of domain (LOD) hernias is a promising tool in abdominal wall surgery. However, little is known about the extent of gain in myofascial advancement especially for the anterior rectus sheath. We, therefore, used a cadaveric model to determine the medialization during IFT.
    METHODS: 4 fresh frozen specimens were used. Retromuscular preparation was carried out followed by IFT with diagonal vertical traction for 30 min. Medial advancement of the anterior rectus sheath was measured after 15 and 30 min as well as traction forces.
    RESULTS: Total medialization for anterior rectus sheath after 30 min of IFT was 10.5 cm (mean). The mean traction force was 16.28 kg. Total medialization was significantly higher during the first 15 min of vertical fascial traction (p < 0.05).
    CONCLUSIONS: IFT provides significant medialization for the anterior rectus sheath in the cadaveric model. The findings align with results from a retrospective case study. Therefore, we see IFT as a beneficial tool in abdominal wall surgery.
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  • 文章类型: Journal Article
    研究表明,使用碱聚合物(AP)驱油处理反应性粘性油,罗马尼亚油田的石油产量显着提高。我们对各种碱和AP浓度进行了全面的界面张力(IFT)测量,以及阶段行为评估。微模型驱油实验用于检查孔隙尺度效应并选择合适的化学浓度。我们测试了岩心水平的驱替效率,并对不同顺序和浓度的碱和聚合物进行了实验,以最大程度地降低成本,同时最大程度地提高反应性粘性油的额外采收率。IFT分析表明,油碱界面的皂化作用显著降低IFT,但随着肥皂从界面扩散,IFT逐渐增加。微观模型表明,单独注入聚合物或碱只能在注水之外实现最小的增量采收率。然而,AP驱油通过有效地将流动的油与粘性流体一起移动并增加更多的油暴露于碱溶液中来显著提高增量油采收率。Coreflood实验证实了这些发现。我们还探索了二价阳离子如何影响聚合物浓度选择,发现软化注射盐水显着增加了AP段塞的粘度。
    The study demonstrates the significant enhancement in oil production from a Romanian oil field using alkali-polymer (AP) flooding for reactive viscous oil. We conducted comprehensive interfacial tension (IFT) measurements across various alkali and AP concentrations, along with phase behavior assessments. Micromodel flooding experiments were used to examine pore-scale effects and select appropriate chemical concentrations. We tested displacement efficiency at the core level and experimented with different sequences and concentrations of alkali and polymers to minimize costs while maximizing the additional recovery of reactive viscous oil. The IFT analysis revealed that saponification at the oil-alkali interface significantly lowers IFT, but IFT gradually increases as soap diffuses away from the interface. Micromodels indicated that polymer or alkali injection alone achieve only minimal incremental recovery beyond waterflooding. However, AP flooding significantly enhanced incremental oil recovery by efficiently moving the mobilized oil with the viscous fluid and increasing exposure of more oil to the alkali solution. Coreflood experiments corroborated these findings. We also explored how divalent cations influence polymer concentration selection, finding that softening the injection brine significantly increased the viscosity of the AP slug.
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  • 文章类型: Journal Article
    The intraflagellar transport (IFT) machinery is essential for cilia assembly, maintenance, and trans-localization of signaling proteins. The IFT machinery consists of two large multiprotein complexes, one of which is the IFT-B. TTC30A and TTC30B are integral components of this complex and were previously shown to have redundant functions in the context of IFT, preventing the disruption of IFT-B and, thus, having a severe ciliogenesis defect upon loss of one paralog. In this study, we re-analyzed the paralog-specific protein complexes and discovered a potential involvement of TTC30A or TTC30B in ciliary signaling. Specifically, we investigated a TTC30A-specific interaction with protein kinase A catalytic subunit α, a negative regulator of Sonic hedgehog (Shh) signaling. Defects in this ciliary signaling pathway are often correlated to synpolydactyly, which, intriguingly, is also linked to a rare TTC30 variant. For an in-depth analysis of this unique interaction and the influence on Shh, TTC30A or B single- and double-knockout hTERT-RPE1 were employed, as well as rescue cells harboring wildtype TTC30 or the corresponding mutation. We could show that mutant TTC30A inhibits the ciliary localization of Smoothened. This observed effect is independent of Patched1 but associated with a distinct phosphorylated PKA substrate accumulation upon treatment with forskolin. This rather prominent phenotype was attenuated in mutant TTC30B. Mass spectrometry analysis of wildtype versus mutated TTC30A or TTC30B uncovered differences in protein complex patterns and identified an impaired TTC30A-IFT57 interaction as the possible link leading to synpolydactyly. We could observe no impact on cilia assembly, leading to the hypothesis that a slight decrease in IFT-B binding can be compensated, but mild phenotypes, like synpolydactyly, can be induced by subtle signaling changes. Our systematic approach revealed the paralog-specific influence of TTC30A KO and mutated TTC30A on the activity of PRKACA and the uptake of Smoothened into the cilium, resulting in a downregulation of Shh. This downregulation, combined with interactome alterations, suggests a potential mechanism of how mutant TTC30A is linked to synpolydactyly.
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  • 文章类型: Journal Article
    随着能源需求的增加,石油仍然是全球重要的燃料来源。化学驱油工艺在石油工程中用于提高剩余油的采收率。作为一项很有前途的提高采油技术,聚合物驱油在实现这一目标方面仍然面临一些挑战。聚合物溶液的稳定性容易受到高温和高盐的恶劣储层条件的影响,以及高盐度等外部环境的影响,高价阳离子,pH值,温度和它自己的结构突出。本文还涉及到常用纳米粒子的介绍,其独特的性能用于提高聚合物在苛刻条件下的性能。讨论了纳米粒子改善聚合物性能的机理,也就是说,它们之间的相互作用如何提高粘度,剪切稳定性,聚合物的耐热性和耐盐性能。纳米颗粒-聚合物流体表现出它们自身不能表现出的性质。介绍了纳米粒子-聚合物流体在三次采油中对降低界面张力和改善储层岩石润湿性的积极作用。描述了纳米粒子-聚合物流体的稳定性。在分析和评估纳米粒子-聚合物流体研究的同时,指出现阶段仍然存在的障碍和挑战,提出了纳米粒子-聚合物流体的未来研究工作。
    With the increasing energy demand, oil is still an important fuel source worldwide. The chemical flooding process is used in petroleum engineering to increase the recovery of residual oil. As a promising enhanced oil-recovery technology, polymer flooding still faces some challenges in achieving this goal. The stability of a polymer solution is easily affected by the harsh reservoir conditions of high temperature and high salt, and the influence of the external environment such as high salinity, high valence cations, pH value, temperature and its own structure is highlighted. This article also involves the introduction of commonly used nanoparticles, whose unique properties are used to improve the performance of polymers under harsh conditions. The mechanism of nanoparticle improvement on polymer properties is discussed, that is, how the interaction between them improves the viscosity, shear stability, heat-resistance and salt-tolerant performance of the polymer. Nanoparticle-polymer fluids exhibit properties that they cannot exhibit by themselves. The positive effects of nanoparticle-polymer fluids on reducing interfacial tension and improving the wettability of reservoir rock in tertiary oil recovery are introduced, and the stability of nanoparticle-polymer fluid is described. While analyzing and evaluating the research on nanoparticle-polymer fluid, indicating the obstacles and challenges that still exist at this stage, future research work on nanoparticle-polymer fluid is proposed.
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  • 文章类型: Journal Article
    通道视紫红质(ChRs)的易位是由步道内运输(IFT)机制介导的。然而,涉及光感受器的网络的功能作用,IFT和其他蛋白质在控制藻类纤毛运动中的作用仍未完全描述。在目前的研究中,我们已经在ChR1的C端鉴定了两个重要的基序,VXPX和LKNE。VXPX是动物中已知的纤毛靶向序列,和LKNE是众所周知的磺酰化基序。据我们所知,这项研究提供了初步的见解SUMO化在衣藻中的作用。我们证明ChR1的VMPS重要与GTPaseCrARL11的互相感化。我们表明SUMO基序存在于来自绿藻的推定ChR1的C末端。使用正乙基马来酰亚胺(NEM)和泛素样蛋白酶1(ULP-1)进行实验,我们显示SUMO化可能调节衣藻中的ChR1蛋白。用2D08,一种已知的sumoylation阻断剂,增加ChR1蛋白的浓度。最后,我们显示了C.reinhardtii的内源性SUMO化蛋白(SUMOylome),通过使用免疫沉淀然后纳米LC-MS/MS检测来鉴定。本报告建立了进化保守的SUMOylation之间的联系,和纤毛机械,用于整个真核生物的纤毛维护和运作。我们丰富的C.reinhardtiiSUMOylome理解与纤毛发育相关的蛋白质,光信号,以及与人类纤毛病相关的直系同源物作为SUMO靶标。
    Translocation of channelrhodopsins (ChRs) is mediated by the intraflagellar transport (IFT) machinery. However, the functional role of the network involving photoreceptors, IFT and other proteins in controlling algal ciliary motility is still not fully delineated. In the current study, we have identified two important motifs at the C-terminus of ChR1, VXPX and LKNE. VXPX is a known ciliary targeting sequence in animals, and LKNE is a well-known SUMOylation motif. To the best of our knowledge, this study gives prima facie insight into the role of SUMOylation in Chlamydomonas. We prove that VMPS of ChR1 is important for interaction with GTPase CrARL11. We show that SUMO motifs are present in the C-terminus of putative ChR1s from green algae. Performing experiments with n-Ethylmaleimide (NEM) and Ubiquitin-like protease 1 (ULP-1), we show that SUMOylation may modulate ChR1 protein in Chlamydomonas. Experiments with 2D08, a known sumoylation blocker, increased the concentration of ChR1 protein. Finally, we show the endogenous SUMOylated proteins (SUMOylome) of C. reinhardtii, identified by using immunoprecipitation followed by nano-LC-MS/MS detection. This report establishes a link between evolutionarily conserved SUMOylation and ciliary machinery for the maintenance and functioning of cilia across the eukaryotes. Our enriched SUMOylome of C. reinhardtii comprehends the proteins related to ciliary development and photo-signaling, along with the orthologue(s) associated to human ciliopathies as SUMO targets.
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  • 文章类型: Journal Article
    目的:本研究的目的是翻译成西班牙语,跨文化适应和验证TFI。
    方法:将TFI问卷翻译成西班牙语(Sp-TFI),并按照已发布的关于跨文化适应健康问卷的指南进行跨文化适应,使用两个指标进行评估。考虑到耳鸣障碍清单(THI)作为黄金标准,使用Cronbach的α评估了其内部一致性。Further,采用组内相关系数(ICC)评估其重测信度.还计算了所有参与者的THI和视觉模拟量表(VAS)的耳鸣测试和重新测试的ICC。
    结果:18名参与者的平均年龄为45.77(SD:11.87)岁;12名女性(66.67%),6名男性(33.33%)。一半的参与者在他们的左耳经历耳鸣,一半在他们的右边。受影响耳朵的平均纯音平均值(PTA)为29.34(SD:8.08)dB-HL。关于Sp-TFI的内部一致性和可靠性,Cronbach'sα为0.83,ICC类型(2,1)为1(CI:0.99-1)。在研究的变量中,我们发现以下独立预测因子对THI评分有统计学意义:性别(p<0.01),PTA(p=0.03),Sp-TFI总评分(p=0.02)和Sp-TFISL,R和A分量表评分(分别为p=0.03,p=0.03和p<0.01)。
    结论:根据本研究获得的内部一致性和可靠性结果,跨文化改编的西班牙语版本的TFI(Sp-TFI)已在西班牙得到验证.
    方法:2B:个体队列研究/低质量随机对照研究。
    OBJECTIVE: The objectives of this study were to translate into Spanish, cross-culturally adapt and validate the TFI.
    METHODS: The TFI questionnaire translated into Spanish (Sp-TFI) and cross-culturally adapted following the published guidelines on cross-cultural adaptation of health questionnaires was evaluated using two indicators. Its internal consistency was assessed with Cronbach\'s α considering the Tinnitus Handicap Inventory (THI) as the gold standard. Further, its test-retest reliability was assessed with intraclass correlation coefficients (ICCs). ICCs were also calculated for the THI and visual analogue scales (VAS) for tinnitus tested and retested in all participants.
    RESULTS: The mean age of the 18 participants was 45.77 (SD: 11.87) years; 12 were female (66.67 %) and 6 were male (33.33%). Half of the participants experienced tinnitus in their left ear and half in their right. The mean pure-tone average (PTA) in the affected ear was 29.34 (SD: 8.08) dB-HL. Regarding internal consistency and reliability of the Sp-TFI respectively, Cronbach\'s α was 0.83 and the ICC type (2,1) was 1 (CI: 0.99-1). Among the variables studied, we found the following independent predictors had statistically significant effects on THI score: sex (p < 0.01), PTA (p = 0.03), overall Sp-TFI score (p = 0.02) and Sp-TFI SL, R and A subscale scores (p = 0.03, p = 0.03, and p < 0.01, respectively).
    CONCLUSIONS: Based on the internal consistency and reliability results obtained in this study, the cross-culturally adapted Spanish version of the TFI (Sp-TFI) has been validated for use in Spain.
    METHODS: 2B: Individual cohort study/low-quality randomized control studies.
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