IDH, isocitrate dehydrogenase

  • 文章类型: Journal Article
    弥漫性神经胶质瘤是一种高度异质性的中枢神经系统肿瘤,对常规治疗难以治疗。残余的胶质瘤细胞从手术和放化疗中逃逸,导致致命的复发。了解这种复发过程的分子机制对于开发成功的疗法至关重要。这里,我们通过一个统一的管道分析了来自46例神经胶质瘤患者的97个配对的原发和复发样本的全外显子组测序(WES)数据.克隆性和系统发育分析表明,分支进化在神经胶质瘤的复发过程中普遍存在。复发性肿瘤继续通过放化疗独立进化,并具有多种复发选择的遗传改变。如PPFIBP1,PDE4DIP的扩增,还有KRAS,TNFRSF14,DCC,CDKN2A,和MSH6,以及ATRX的突变,ARID1A,KEL,TP53、MSH6和KMT2B。同时,在原发性和复发性神经胶质瘤中鉴定出部分驱动基因内的躯干变异,表明它们可能是理想的治疗目标。有趣的是,与原发性肿瘤相比,复发性胶质瘤的免疫原性没有显著增加.复发性神经胶质瘤的基因组分析提供了鉴定在临床采样的原发性肿瘤中未检测到的潜在临床信息改变的机会。
    Diffuse glioma is a highly heterogeneous central nervous system tumor that is refractory to conventional therapy. Residual glioma cells escape from surgery and chemoradiotherapy, leading to lethal recurrence. Understanding the molecular mechanism of this recurrence process is critical to the development of successful therapies. Here, we analyzed whole-exome sequencing (WES) data of 97 paired primary and recurrent samples from 46 patients with glioma via a uniform pipeline. Clonality and phylogenetic analyses revealed that branching evolution was widespread in the recurrent process of gliomas. Recurrent tumors continued to evolve independently with chemoradiotherapy and harbored multiple recurrence-selected genetic alterations, such as amplification of PPFIBP1, PDE4DIP, and KRAS, deletion of TNFRSF14, DCC, CDKN2A, and MSH6, and mutations in ATRX, ARID1A, KEL, TP53, MSH6, and KMT2B. Meanwhile, truncal variants within partial driver genes were identified among primary and recurrent gliomas, suggesting that they might be ideal therapeutic targets. Intriguingly, the immunogenicity of recurrent gliomas did not increase significantly compared to the primary tumors. Genomic analysis of recurrent gliomas provided an opportunity to identify potentially clinically informative alterations not detected in clinically sampled primary tumors.
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  • 文章类型: Journal Article
    未经授权:软骨肉瘤是一种常见的恶性骨肿瘤,治疗选择有限。大约一半的软骨肉瘤在异柠檬酸脱氢酶(IDH)中具有功能获得突变,和突变体IDH产生2-羟基戊二酸(2-HG),这是一种有助于恶性转化的癌代谢物。因此,抑制2-HG的产生是晚期软骨肉瘤的一种新颖且有前途的治疗方法。2-HG也有望成为诊断和治疗IDH突变型肿瘤的有用生物标志物。然而,很少有研究使用软骨肉瘤临床标本证实这一点。2-HG水平的非侵入性监测可用于推断突变型IDH抑制剂达到治疗靶标并确认其在临床实践中的治疗功效。
    UASSIGNED:为了评估2-HG作为诊断和治疗效果的替代生物标志物的临床实用性,我们使用软骨肉瘤患者的冷冻组织和外周血测量了肿瘤内和血清中2-HG的水平.我们还开发了一种使用磁共振波谱(MRS)在体内检测肿瘤内2-HG信号的非侵入性方法。
    未经证实:IDH突变型肿瘤的瘤内和血清2-HG水平均显著升高,这些水平与生存率下降有关。此外,我们使用MR波谱在IDH突变软骨肉瘤的异种移植模型中检测到肿瘤内2-HG峰,并观察到2-HG峰信号在施用突变体IDH1的抑制剂后消失。
    UNASSIGNED:我们的研究结果表明,肿瘤内和血清2-HG水平都代表了IDH突变肿瘤的潜在有用生物标志物,并且MR光谱中的2-HG信号具有作为非侵入性生物标志物的潜在价值。一起来看,这些发现可能对突变IDH抑制剂治疗晚期软骨肉瘤的临床发展产生积极影响.
    UNASSIGNED: Chondrosarcoma is a common form of malignant bone tumor with limited treatment options. Approximately half of chondrosarcomas harbor gain-of-function mutations in isocitrate dehydrogenase (IDH), and mutant IDH produces 2-hydroxyglutarate (2-HG), which is an oncometabolite that contributes to malignant transformation. Therefore, inhibiting 2-HG production is a novel and promising treatment for advanced chondrosarcoma. 2-HG is also expected to be a useful biomarker for the diagnosis and treatment of IDH-mutant tumors. However, few studies have confirmed this using chondrosarcoma clinical specimens. Non-invasive monitoring of 2-HG levels is useful to infer that mutant IDH inhibitors reach therapeutic targets and to confirm their therapeutic efficacy in clinical practice.
    UNASSIGNED: To evaluate the clinical utility of 2-HG as a surrogate biomarker for diagnosis and therapeutic efficacy, we measured intra-tumor and serum levels of 2-HG using frozen tissues and peripheral blood from patients with chondrosarcoma. We also developed a non-invasive method to detect intra-tumor 2-HG signals in vivo using magnetic resonance spectroscopy (MRS).
    UNASSIGNED: Both intratumoral and serum 2-HG levels were significantly elevated in IDH-mutant tumors, and these levels correlated with decreased survival. Furthermore, we detected intratumoral 2-HG peaks using MR spectroscopy in a xenograft model of IDH-mutant chondrosarcoma, and observed that 2-HG peak signals disappeared after administering an inhibitor of mutant IDH1.
    UNASSIGNED: Our findings suggest that both intratumoral and serum 2-HG levels represent potentially useful biomarkers for IDH-mutant tumors and that the 2-HG signal in MR spectra has potential value as a non-invasive biomarker. Taken together, these findings may positively impact the clinical development of mutant IDH inhibitors for the treatment of advanced chondrosarcoma.
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  • 文章类型: Journal Article
    UNASSIGNED:目的研究放疗(RT)剂量浴在低级别神经胶质瘤(LGG)治疗患者中的临床相关性。
    UNASSIGNED:使用神经认知功能(NCF)测试和结构磁共振成像(MRI)对接受LGGRT治疗的患者(n=17)进行评估,并根据肿瘤侧向化分为亚组。RT剂量,提取对侧大脑的体积结果和脑微出血(CMB)数,对侧海马,还有小脑.RT临床靶体积(CTV)被包括在分析中作为局灶性肿瘤和其他治疗效果的替代。RT剂量之间的关系,CTV,每个亚组分析NCF和放射学结果。
    UNASSIGNED:患有左侧肿瘤的亚组(n=10)在口头测试中表现明显较低。右脑的RT剂量,以及CTV,与处理速度测试性能较差有关,注意,和视觉空间能力,更多CMB在右侧肿瘤亚组(n=7),左大脑中的RT剂量与较低的言语记忆表现有关,(立即和延迟召回,r=-0.821,p=0.023和r=-0.937,p=0.002),左侧海马的RT剂量与海马体积有关(r=-0.857,p=0.014),CTV和NCF之间没有相关性。
    未经评估:通过使用一种新颖的方法,我们能够更具体地研究在LGG患者中RT剂量浴的临床相关性。我们使用联合MRI和NCF结果测量来评估辐射诱发的脑损伤,并观察到对左侧大脑的潜在RT效应,导致言语记忆能力和海马体积降低。
    UNASSIGNED: To investigate the clinical relevance of the radiotherapy (RT) dose bath in patients treated for lower grade glioma (LGG).
    UNASSIGNED: Patients (n = 17) treated with RT for LGG were assessed with neurocognitive function (NCF) tests and structural Magnetic Resonance Imaging (MRI) and categorized in subgroups based on tumour lateralisation. RT dose, volumetric results and cerebral microbleed (CMB) number were extracted for contralateral cerebrum, contralateral hippocampus, and cerebellum. The RT clinical target volume (CTV) was included in the analysis as a surrogate for focal tumour and other treatment effects. The relationships between RT dose, CTV, NCF and radiological outcome were analysed per subgroup.
    UNASSIGNED: The subgroup with left-sided tumours (n = 10) performed significantly lower on verbal tests. The RT dose to the right cerebrum, as well as CTV, were related to poorer performance on tests for processing speed, attention, and visuospatial abilities, and more CMB.In the subgroup with right-sided tumours (n = 7), RT dose in the left cerebrum was related to lower verbal memory performance, (immediate and delayed recall, r = -0.821, p = 0.023 and r = -0.937, p = 0.002, respectively), and RT dose to the left hippocampus was related to hippocampal volume (r = -0.857, p = 0.014), without correlation between CTV and NCF.
    UNASSIGNED: By using a novel approach, we were able to investigate the clinical relevance of the RT dose bath in patients with LGG more specifically. We used combined MRI-derived and NCF outcome measures to assess radiation-induced brain damage, and observed potential RT effects on the left-sided brain resulting in lower verbal memory performance and hippocampus volume.
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  • 文章类型: Journal Article
    目的:晚期胆道癌(ABTC)与不良预后相关。关于ABTC患者接受序贯化疗的结果的真实数据仍然很少,除了既定的吉西他滨+顺铂和FOLFOX一线和二线治疗外,对治疗方案知之甚少。这项研究旨在评估患者对不同肿瘤治疗的结果,并确定预后因素。
    方法:从2010年1月至2019年12月,142例患者在我们的三级护理肝脏中心开始姑息性化疗。使用Kaplan-Meier图计算总生存期(OS)。使用cox比例风险评估预后因素。
    结果:患者接受2行化疗的中位数。接受1、2和3行化疗的患者的中位OS分别为6.7、15.2和18.2个月,分别。用FOLFIRINOX治疗的患者具有23.8个月的显著延长的OS(对数秩检验:p=0.018)。单变量cox回归分析确定了与生存相关的几个临床参数(例如白蛋白,胆红素,癌胚抗原,碳水化合物抗原19-9水平)。
    结论:我们的研究提供了ABTC预后的真实数据,包括接受第三行及以后行化疗患者的生存时间。
    背景:在对照试验框架之外描述晚期胆道癌患者预后的真实世界数据仍然很少见,尽管这对于临床决策非常重要。因此,这项研究提供了关于吉西他滨+顺铂和FOLFOX的一线和二线治疗的重要现实数据,以及其他化疗方案或后期化疗方案。它进一步证明FOLFIRINOX的使用与有希望的生存有关,并且各种临床参数之间存在关联,例如治疗前白蛋白,胆红素或碳水化合物抗原19-9水平和生存率。
    OBJECTIVE: Advanced biliary tract cancer (ABTC) is associated with a poor prognosis. Real-world data on the outcome of patients with ABTC undergoing sequential chemotherapies remain scarce, and little is known about treatment options beyond the established first- and second-line treatments with gemcitabine + cisplatin and FOLFOX. This study aimed to evaluate the outcome of patients with regard to different oncological therapies and to identify prognostic factors.
    METHODS: From January 2010 until December 2019, 142 patients started palliative chemotherapy at our tertiary care liver center. Overall survival (OS) was calculated using Kaplan-Meier plots. Prognostic factors were evaluated using cox proportional-hazards.
    RESULTS: Patients received a median number of 2 lines of chemotherapy. Median OS was 6.7, 15.2 and 18.2 months for patients who received 1, 2 and 3 lines of chemotherapy, respectively. Patients treated with FOLFIRINOX had a significantly extended OS of 23.8 months (log-rank test: p = 0.018). The univariate cox regression analysis identified several clinical parameters associated with survival (e.g. albumin, bilirubin, carcinoembryonic antigen, carbohydrate antigen 19-9 levels).
    CONCLUSIONS: Our study provides real-world data on the prognosis of ABTC including survival times for patients receiving third and later lines of chemotherapy.
    BACKGROUND: Real-world data depicting the outcome of patients with advanced biliary tract cancer outside the framework of controlled trials remain rare despite being extremely important for clinical decision-making. This study therefore provides important real-world data on the established first- and second-line treatments with gemcitabine + cisplatin and FOLFOX, as well as on other chemotherapy regimens or later lines of chemotherapy. It further demonstrates that the use of FOLFIRINOX is associated with promising survival and that there is an association between various clinical parameters such as pre-therapeutic albumin, bilirubin or carbohydrate antigen 19-9 levels and survival.
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  • 文章类型: Journal Article
    肿瘤患者心血管护理的一个重要优先事项是降低发病率和死亡率,并通过跨学科努力提高癌症幸存者的生活质量。在过去的几十年中,癌症患者的生存率显着提高。尽管如此,从长远来看,幸存者更有可能死于心血管疾病,次要,不仅对癌症疗法的潜在毒性,还有癌症的生物学。在这种情况下,基础和转化研究的努力对于理解癌症患者和幸存者心血管疾病的分子机制至关重要,并确定可以预防和治疗这两种疾病的新治疗靶点。这篇综述旨在强调我们目前对癌症和心脏之间的代谢相互作用的理解。包括潜在的治疗靶点。还提供了可以支持研究和临床管理的成像技术的概述。最后,本综述重点介绍了在心脏肿瘤学背景下促进我们对代谢的理解所必需的机遇和挑战.
    An important priority in the cardiovascular care of oncology patients is to reduce morbidity and mortality, and improve the quality of life in cancer survivors through cross-disciplinary efforts. The rate of survival in cancer patients has improved dramatically over the past decades. Nonetheless, survivors may be more likely to die from cardiovascular disease in the long term, secondary, not only to the potential toxicity of cancer therapeutics, but also to the biology of cancer. In this context, efforts from basic and translational studies are crucial to understanding the molecular mechanisms causal to cardiovascular disease in cancer patients and survivors, and identifying new therapeutic targets that may prevent and treat both diseases. This review aims to highlight our current understanding of the metabolic interaction between cancer and the heart, including potential therapeutic targets. An overview of imaging techniques that can support both research studies and clinical management is also provided. Finally, this review highlights opportunities and challenges that are necessary to advance our understanding of metabolism in the context of cardio-oncology.
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  • 文章类型: Journal Article
    胆道癌(BTC)是侵袭性上皮恶性肿瘤,可在胆道树的任何部位出现。尽管很罕见,在过去的40年里,它们的发病率和死亡率一直在稳步上升,强调需要改进当前的诊断和治疗策略。BTC在形态和分子水平上都显示出高的肿瘤间和肿瘤内异质性。这种复杂的异质性对有效的干预措施构成了实质性障碍。人们普遍认为,观察到的异质性可能是不同元素复杂相互作用的结果,包括风险因素,不同的分子改变和多个潜在的起源细胞。在实验模型中使用遗传谱系追踪系统已经确定了胆管细胞,肝细胞和/或祖细胞样细胞作为BTC的起源细胞。支持不同起源细胞假说的基因组证据正在增加。在这次审查中,我们关注BTC组织病理学亚型的最新进展,讨论当前的基因组证据,并概述谱系追踪研究,这些研究有助于围绕这些肿瘤的起源细胞的当前知识。
    Biliary tract cancers (BTCs) are aggressive epithelial malignancies that can arise at any point of the biliary tree. Albeit rare, their incidence and mortality rates have been rising steadily over the past 40 years, highlighting the need to improve current diagnostic and therapeutic strategies. BTCs show high inter- and intra-tumour heterogeneity both at the morphological and molecular level. Such complex heterogeneity poses a substantial obstacle to effective interventions. It is widely accepted that the observed heterogeneity may be the result of a complex interplay of different elements, including risk factors, distinct molecular alterations and multiple potential cells of origin. The use of genetic lineage tracing systems in experimental models has identified cholangiocytes, hepatocytes and/or progenitor-like cells as the cells of origin of BTCs. Genomic evidence in support of the distinct cell of origin hypotheses is growing. In this review, we focus on recent advances in the histopathological subtyping of BTCs, discuss current genomic evidence and outline lineage tracing studies that have contributed to the current knowledge surrounding the cell of origin of these tumours.
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  • 文章类型: Journal Article
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  • 文章类型: Journal Article
    BACKGROUND: Chondrosarcomas are malignant cartilage-producing tumors showing mutations and changes in gene expression in metabolism related genes. In this study, we aimed to explore the metabolome and identify targetable metabolic vulnerabilities in chondrosarcoma.
    METHODS: A custom-designed metabolic compound screen containing 39 compounds targeting different metabolic pathways was performed in chondrosarcoma cell lines JJ012, SW1353 and CH2879. Based on the anti-proliferative activity, six compounds were selected for validation using real-time metabolic profiling. Two selected compounds (rapamycin and sapanisertib) were further explored for their effect on viability, apoptosis and metabolic dependency, in normoxia and hypoxia. In vivo efficacy of sapanisertib was tested in a chondrosarcoma orthotopic xenograft mouse model.
    RESULTS: Inhibitors of glutamine, glutathione, NAD synthesis and mTOR were effective in chondrosarcoma cells. Of the six compounds that were validated on the metabolic level, mTOR inhibitors rapamycin and sapanisertib showed the most consistent decrease in oxidative and glycolytic parameters. Chondrosarcoma cells were sensitive to mTORC1 inhibition using rapamycin. Inhibition of mTORC1 and mTORC2 using sapanisertib resulted in a dose-dependent decrease in viability in all chondrosarcoma cell lines. In addition, induction of apoptosis was observed in CH2879 after 24 h. Treatment of chondrosarcoma xenografts with sapanisertib slowed down tumor growth compared to control mice.
    CONCLUSIONS: mTOR inhibition leads to a reduction of oxidative and glycolytic metabolism and decreased proliferation in chondrosarcoma cell lines. Although further research is needed, these findings suggest that mTOR inhibition might be a potential therapeutic option for patients with chondrosarcoma.
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  • 文章类型: Journal Article
    Background: B7-H3 is an immune checkpoint member that belongs to B7-CD28 families and plays a vital role in the inhibition of T-cell function. Importantly, B7-H3 is widely overexpressed on solid tumors, making it become an attractive target for cancer immunotherapy. To clarify the expression panel of B7-H3 in glioma, we explored the clinical and immune features of B7-H3 expression in a large-scale study. Methods and patients: Totally, 1323 glioma samples from Chinese Glioma Genome Atlas (CGGA) dataset, including 325 RNAseq data and 301 mRNA microarray data, and The Cancer Genome Atlas (TCGA) dataset, including 697 RNAseq data, were gathered into our research. The statistical analysis and graphical work were mainly realized by R language. Results: B7-H3 expression was found positively correlated with the grade of malignancy, which might be caused by hypomethylation. The expression level of B7-H3 was consistently up-regulated in IDH wild-type glioma and highly enriched in mesenchymal subtype. GSEA analysis suggested that B7-H3 related genes were more involved in immune response and angiogenesis in glioma. Moreover, B7-H3 showed a consistent positive relationship with stromal and immune cell populations. Further analysis confirmed that B7-H3 played an important role in T-cell-mediated immunity, especially in T-cell-mediated immune response to tumor cell. Circos plots revealed that B7-H3 was tightly associated with most B7 members and other immune checkpoints. Univariate and multivariate cox analysis demonstrated that B7-H3 was an independent prognosticator for glioma patients. Conclusion: B7-H3 represents the malignant phenotype of glioma and independently predicted worse prognosis in glioma patients. Moreover, B7-H3 collaborating with other checkpoint members may contribute to the dysfunctional phenotype of T cell. These findings will be helpful for further optimizing immunotherapies for glioma.
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  • 文章类型: Journal Article
    活石马铃薯(PlectranthusesculenthusN.E.Br)对血清葡萄糖的影响,糖化血红蛋白(HbA1C),血清甘油三酯,总胆固醇,高密度脂蛋白(HDL),低密度脂蛋白(LDL),极低密度脂蛋白(VLDL),肝苹果酸酶(ME),使用标准技术研究了链脲佐菌素诱导的糖尿病大鼠的异柠檬酸脱氢酶(IDH)和过氧化氢酶活性。以LDL与HDL和总胆固醇与HDL的比值计算大鼠的动脉粥样硬化指数(AI)和冠状动脉危险指数(CRI),分别。非糖尿病患者的血清葡萄糖,糖尿病对照和糖尿病大鼠给予livingstone马铃薯掺入饲料(测试饲料)分别为92.58±3.97、352.30±4.88和165.50±7.88mg/dl,分别。第3组糖尿病大鼠摄入试验饲料,使其血糖显著下降(P<0.05),HbA1c,甘油三酯,胆固醇,LDL,VLDL,AI和CRI,但显著增加(P<0.05)肝脏的ME水平,IDH,过氧化氢酶和血清HDL与糖尿病对照大鼠相比,这些参数与非糖尿病大鼠相比有显着变化(P<0.05)。非糖尿病患者的饲料摄入量,在实验的最后一周,接受测试饲料的糖尿病对照和糖尿病大鼠分别为133.34±1.32、137.84±5.77和146.38±4.33g/大鼠/周。尽管采食量增加,但与非糖尿病大鼠相比,糖尿病对照大鼠记录到显著的体重减轻(P<0.05)。标准饲料和试验饲料的化学分析表明,标准大鼠饲料含有15.00±0.78%的蛋白质,7.24±1.20%脂肪,31.55±2.62%碳水化合物,能量值为290.65±4.77千卡/100克,10%粗纤维和0.12±0.04mg没食子酸当量,而试验饲料含有40.10±0.16%碳水化合物,17.22±0.40%蛋白质,22.16±0.34%脂肪,能量值为428.70±2.12千卡/100克,8.51±0.16%粗纤维,1.3±0.2mg没食子酸当量/g样品和与标准槲皮素相当的强抗氧化活性。该研究显示了livingstone马铃薯在糖尿病和高脂血症管理中的潜力。
    The effect of livingstone potato (Plectranthus esculenthus N.E.Br) on serum glucose, glycated hemoglobin (HbA1C), serum triglyceride, total cholesterol, high density lipoprotein (HDL), low density lipoprotein (LDL), very low density lipoprotein (VLDL), hepatic malic enzyme (ME), isocitrate dehydrogenase (IDH) and catalase activities of Streptozotocin induced diabetic rats were investigated using standard techniques. The atherogenic index (AI) and coronary risk index (CRI) of the rats were calculated as the ratios of LDL to HDL and total cholesterol to HDL, respectively. The serum glucose of the non-diabetic, diabetic control and diabetic rats given livingstone potato incorporated feeds (test feed) were 92.58 ± 3.97, 352.30 ± 4.88 and 165.50 ± 7.88 mg/dl, respectively. Intake of the test feed by the diabetic rats of group 3, resulted in significant (P < 0.05) decrease of their serum glucose, HbA1c, triglyceride, cholesterol, LDL, VLDL, AI and CRI but significant increase (P < 0.05) of hepatic levels of ME, IDH, catalase and serum HDL compared with the diabetic control rats that had significant alteration of these parameters (P < 0.05) compared with the non-diabetic rats. The feed intakes of the non-diabetic, diabetic control and diabetic rats given the test feed were 133.34 ± 1.32, 137.84 ± 5.77 and 146.38 ± 4.33 g/rat/week by the last week of experimentation. The diabetic control rats recorded significant loss of weight (P < 0.05) compared with the non diabetic rats despite increased feed intake. Chemical analysis of the standard and test feeds showed that the standard rat feed contained 15.00 ± 0.78% protein, 7.24 ± 1.20% fat, 31.55 ± 2.62% carbohydrates, energy value of 290.65 ± 4.77 kcal/100 g, 10% crude fiber and 0.12 ± 0.04 mg Gallic Acid Equivalent while the test feed contained 40.10 ± 0.16% carbohydrates, 17.22 ± 0.40% protein, 22.16 ± 0.34% fat, energy value of 428.70 ± 2.12 kcal/100 g, 8.51 ± 0.16% crude fiber, 1.3 ± 0.2 mg Gallic Acid Equivalent/g of sample and strong antioxidant activity comparable to standard quercetin. The study shows the potentials of livingstone potato in the management of diabetes and hyperlipidemia.
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