Coffin-Siris综合征(CSS)是一种罕见的常染色体显性遗传障碍,以独特的面部特征为特征,远端指骨或第五个和其他指头的指甲发育不全,不同程度的发育或认知延迟,低张力,多毛症/多毛症,稀疏的头皮毛发和各种先天性异常。由于其遗传和表型异质性,CSS很容易被误诊为具有相似临床表现的其他综合征或疾病。我们描述了来自健康中国家庭的一名患者的基因型-表型相关性,首先在眼科诊断为早发性高度近视(eoHM)。对参与者进行全面的眼科检查以及其他全身性检查以确认表型。使用全外显子组测序鉴定基因型,并通过Sanger测序进一步验证了其他家庭成员之间的结果。采用实时定量PCR(RT-qPCR)技术检测先证者与正常家族成员候选基因的相对mRNA表达水平。鉴定的变异体的致病性由美国医学遗传学和基因组学学院(ACMG)指南确定。采用STRING蛋白-蛋白相互作用(PPIs)网络分析检测候选基因相关蛋白与高度近视基因相关蛋白的相互作用。病人有过量的eoHM,锥杆营养不良,粗糙的面,头发在脸上过度生长,稀疏的头皮头发,发育迟缓,智力残疾,中度听力损失,牙齿发育不全,卵圆孔未闭,慢性非萎缩性胃炎,双侧肾囊肿,麦格纳池,和侵略性的情绪爆发。遗传评估显示,该患者在ARID1Bc.3981dup中携带从头杂合移码插入变体(pGlu1328ArgfsTer5),这与CSS患者的典型临床特征密切相关。RT-qPCR检测结果显示,先证者ARID1B基因mRNA表达量较正常对照家系低约30%,表明该变体在mRNA表达水平上对基因功能有影响。根据ACMG指南的评估,该变体具有致病性。STRING在线数据库中蛋白质相互作用的分析表明,ARID1A蛋白与高度近视基因相关蛋白FGFR3,ASXL1,ERBB3和SOX4相互作用,而ARID1A蛋白拮抗ARID1B蛋白。因此,在本文中,我们是第一个报道ARID1B基因中的从头杂合移码插入变体,导致CSS具有过量的eoHM。我们的研究扩展了ARID1B-CSS的基因型和表型谱,并提供了eoHM与ARID1B基因变异显著相关的证据。由于CSS具有较高的遗传和表型异质性,我们的研究结果强调了分子遗传学检测和跨学科临床诊断检查的重要性,以避免误诊为一些具有类似CSS表现的疾病.
Coffin-Siris syndrome (CSS) is a rare autosomal dominant inheritance disorder characterized by distinctive facial features, hypoplasia of the distal phalanx or nail of the fifth and additional digits, developmental or cognitive delay of varying degree, hypotonia, hirsutism/hypertrichosis, sparse scalp hair and varying kind of congenital anomalies. CSS can easily be misdiagnosed as other syndromes or disorders with a similar clinical picture because of their genetic and phenotypic heterogeneity. We describde the genotype-phenotype correlation of one patient from a healthy Chinese family with a novel genotype underlying CSS, who was first diagnosed in the ophthalmology department as early-onset high myopia (eoHM). Comprehensive ophthalmic tests as well as other systemic examinations were performed on participants to confirm the phenotype. The genotype was identified using whole exome sequencing, and further verified the results among other family members by Sanger sequencing. Real-time quantitative PCR (RT-qPCR) technology was used to detect the relative mRNA expression levels of candidate genes between proband and normal family members. The pathogenicity of the identified variant was determined by The American College of Medical Genetics and Genomics (ACMG) guidelines. STRING protein-protein interactions (PPIs) network analysis was used to detect the interaction of candidate gene-related proteins with high myopia gene-related proteins. The patient had excessive eoHM, cone-rod dystrophy, coarse face, excessive hair growth on the face, sparse scalp hair, developmental delay, intellectual disability, moderate hearing loss, dental hypoplasia, patent foramen ovale, chronic non-atrophic gastritis, bilateral renal cysts, cisterna magna, and emotional outbursts with aggression. The genetic assessment revealed that the patient carries a de novo heterozygous frameshift insertion variant in the ARID1B c.3981dup (p.Glu1328ArgfsTer5), which are strongly associated with the typical clinical features of CSS patients. The test results of RT-qPCR showed that mRNA expression of the ARID1B gene in the proband was approximately 30% lower than that of the normal control in the family, suggesting that the variant had an impact on the gene function at the level of mRNA expression. The variant was pathogenic as assessed by ACMG guidelines. Analysis of protein interactions in the STRING online database revealed that the ARID1A protein interacts with the high myopia gene-related proteins FGFR3, ASXL1, ERBB3, and SOX4, whereas the ARID1A protein antagonizes the ARID1B protein. Therefore, in this paper, we are the first to report a de novo heterozygous frameshift insertion variant in the ARID1B gene causing CSS with excessive eoHM. Our study extends the genotypic and phenotypic spectrums for ARID1B-CSS and supplies evidence of significant association of eoHM with variant in ARID1B gene. As CSS has high genetic and phenotypic heterogeneity, our findings highlight the importance of molecular genetic testing and an interdisciplinary clinical diagnostic workup to avoid misdiagnosis as some disorders with similar manifestations of CSS.