Gull

海鸥
  • 文章类型: Journal Article
    塑料摄入给野生动物带来了许多潜在的风险。了解哪些物种和环境最容易受到塑料污染是研究塑料暴露对健康的影响的关键第一步。这项研究的目的如下:1)利用尸检作为正在进行的被动疾病监测的一部分,调查在安大略省和努纳武特收集的鸟类中摄入的介体,并检查鸟类水平因素与摄入的碎片之间的关系;2)评估与猛禽中摄入的中段碎片相比的微塑料摄入;3)确定潜在的哨兵物种,用于在研究不足的淡水和陆地(内陆)环境中进行塑料污染监测。在2020年至2022年之间,接收了52种457只自由放养的鸟类进行验尸。使用标准技术检查上消化道的中塑料和其他碎片(>2mm)。24个人(5.3%)保留了中质碎片,并且患病率因物种而异,用觅食技术,食物类型,和觅食基质都与不同的碎片摄取指标相关。非猛禽物种摄取任何类型的人为中间碎片的几率是猛禽的九倍。对于14个物种的猛禽子集(N=54),用氢氧化钾消化远端肠道的末端部分,并使用立体显微镜评估微粒.尽管两项分析中包含的54只猛禽中只有1只(1.9%)保留了上消化道的中膜碎片,24(44.4%)在远端肠中含有微粒。这项研究表明,各种加拿大鸟类在内陆系统中摄取人为碎片,并表明生活史和行为与摄入风险有关。对于猛禽来说,控制中塑料暴露和摄入的机制似乎与控制微塑料的机制不同。建议将鲱鱼海鸥(Larusargentatus)和环嘴海鸥(Larusdelawarensis)作为内陆系统中塑料污染监测的理想哨兵。
    Plastic ingestion presents many potential avenues of risk for wildlife. Understanding which species and environments are most exposed to plastic pollution is a critical first step in investigating the One Health implications of plastic exposure. The objectives of this study were the following: 1) Utilize necropsy as part of ongoing passive disease surveillance to investigate ingested mesoplastics in birds collected in Ontario and Nunavut, and examine the relationships between bird-level factors and ingested debris; 2) evaluate microplastic ingestion compared to ingested mesodebris in raptors; and 3) identify potential sentinel species for plastic pollution monitoring in understudied freshwater and terrestrial (inland) environments. Between 2020 and 2022, 457 free-ranging birds across 52 species were received for postmortem examination. The upper gastrointestinal tracts were examined for mesoplastics and other debris (>2 mm) using standard techniques. Twenty-four individuals (5.3%) retained mesodebris and prevalence varied across species, with foraging technique, food type, and foraging substrate all associated with different metrics of debris ingestion. The odds of ingesting any type of anthropogenic mesodebris was nine times higher for non-raptorial species than for raptors. For a subset of raptors (N = 54) across 14 species, the terminal portion of the distal intestinal tract was digested with potassium hydroxide and microparticles were assessed using stereo-microscopy. Although only one of 54 (1.9%) raptors included in both analyses retained mesodebris in the upper gastrointestinal tract, 24 (44.4%) contained microparticles in the distal intestine. This study demonstrates that a variety of Canadian bird species ingest anthropogenic debris in inland systems, and suggests that life history and behaviour are associated with ingestion risk. For raptors, the mechanisms governing exposure and ingestion of mesoplastics appear to be different than those that govern microplastics. Herring gulls (Larus argentatus) and ring-billed gulls (Larus delawarensis) are proposed as ideal sentinels for plastic pollution monitoring in inland systems.
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  • 文章类型: Journal Article
    禽流感病毒(AIV)是一种具有人畜共患和大流行潜力的病原体。候鸟是所有已知AIV亚型的天然宿主,除H17N10和H18N11外,它们与以前的全球高致病性禽流感疫情有关。这项研究从韩国的Vega鸥(Larusvegaemongolicus)中鉴定并鉴定了H13N6亚型的第一个分离株。血凝素基因的氨基酸序列显示低致病性AIV亚型,与参考序列和已知的H13分离株相比,该序列中发现了各种氨基酸取代。在HA中发现与其他H13N6分离株具有很高的序列同源性,NA,PB1和PA基因,但不是PB2,NP,M,和NS基因。有趣的是,在所有基因片段上都发现了各种点氨基酸突变,有些与人类受体的结合增加有关,对抗病毒药物的抗性,和毒力。进化和系统发育分析表明,所有基因片段都是适应海鸥的,主要起源于欧亚地区,除了PB2,PA,和M.这项研究的发现支持了AIV在自然界中持续发生的重新组合的证据,候鸟在禽流感病毒的洲际传播中至关重要。
    Avian influenza virus (AIV) is a pathogen with zoonotic and pandemic potential. Migratory birds are natural reservoirs of all known subtypes of AIVs, except for H17N10 and H18N11, and they have been implicated in previous highly pathogenic avian influenza outbreaks worldwide. This study identified and characterized the first isolate of the H13N6 subtype from a Vega gull (Larus vegae mongolicus) in South Korea. The amino acid sequence of hemagglutinin gene showed a low pathogenic AIV subtype and various amino acid substitutions were found in the sequence compared to the reference sequence and known H13 isolates. High sequence homology with other H13N6 isolates was found in HA, NA, PB1, and PA genes, but not for PB2, NP, M, and NS genes. Interestingly, various point amino acid mutations were found on all gene segments, and some are linked to an increased binding to human-type receptors, resistance to antivirals, and virulence. Evolutionary and phylogenetic analyses showed that all gene segments are gull-adapted, with a phylogeographic origin of mostly Eurasian, except for PB2, PA, and M. Findings from this study support the evidence that reassortment of AIVs continuously occurs in nature, and migratory birds are vital in the intercontinental spread of avian influenza viruses.
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  • 文章类型: Video-Audio Media
    背景:遏制抗生素耐药性的潜在负面影响,我们这个时代日益增长的全球公共卫生危机之一,需要定期监测抵抗情况,包括抗性基因的储备。野生鸟类,一种可能的抗生素耐药性的生物指示剂,有人建议在抗生素抗性细菌的传播中发挥作用。因此,这项研究的目的是通过使用Kirby-Bauer圆盘扩散法和PCR来确定100株海鸥和鸽子来源的大肠杆菌的表型和基因型耐药性。此外,通过RAPD-PCR确定分离株的遗传关系。
    结果:表型抗生素药敏试验显示,63%(63/100)和29%(29/100)的大肠杆菌分离株对至少一种抗生素具有耐药性和多重耐药(MDR),分别。除了头孢菌素,大肠杆菌分离株100%易感,四环素(52%),卡那霉素(38%),链霉素(37%),氨苄青霉素(28%),氯霉素(21%),甲氧苄啶/磺胺甲恶唑(19%),庆大霉素(13%),恩诺沙星(12%)和环丙沙星(12%)在不同程度上检测到耐药。在研究的抗性基因中,tet(B)(66%),tet(A)(63%),aphA1(48%),sul3(34%),sul2(26%),检测到strA/strB(24%)和sul1(16%)。关于分离株的遗传多样性,基于RAPD-PCR的树状图基于70%的相似性阈值将鸽子和海鸥分离株分为5个不同的簇.树状图分析显示,鸽子源菌株之间的相似性为47-100%,鸥源大肠杆菌菌株之间的相似性为40-100%。
    结论:这项研究表明,海鸥和鸽子携带MDR大肠杆菌分离株,这可能会通过用粪便污染环境而对动物和人类健康构成威胁。然而,从“一个健康”的角度调查菌株的遗传关系的大规模流行病学研究是必要的,以确定抗生素抗性细菌在野生鸟类之间可能的传播模式,环境,人类,和其他主机。视频摘要。
    BACKGROUND: Curbing the potential negative impact of antibiotic resistance, one of our era\'s growing global public health crises, requires regular monitoring of the resistance situations, including the reservoir of resistance genes. Wild birds, a possible bioindicator of antibiotic resistance, have been suggested to play a role in the dissemination of antibiotic-resistant bacteria. Therefore, this study was conducted with the objective of determining the phenotypic and genotypic antibiotic resistance profiles of 100 Escherichia coli isolates of gull and pigeon origin by using the Kirby-Bauer disk diffusion method and PCR. Furthermore, the genetic relationships of the isolates were determined by RAPD-PCR.
    RESULTS: Phenotypic antibiotic susceptibility testing revealed that 63% (63/100) and 29% (29/100) of E. coli isolates were resistant to at least one antibiotic and multidrug-resistant (MDR), respectively. With the exception of cephalothin, to which the E. coli isolates were 100% susceptible, tetracycline (52%), kanamycin (38%), streptomycin (37%), ampicillin (28%), chloramphenicol (21%), trimethoprim/sulfamethoxazole (19%), gentamicin (13%), enrofloxacin (12%) and ciprofloxacin (12%) resistances were detected at varying degrees. Among the investigated resistance genes, tet(B) (66%), tet(A) (63%), aphA1 (48%), sul3 (34%), sul2 (26%), strA/strB (24%) and sul1 (16%) were detected. Regarding the genetic diversity of the isolates, the RAPD-PCR-based dendrograms divided both pigeon and gull isolates into five different clusters based on a 70% similarity threshold. Dendrogram analysis revealed 47-100% similarities among pigeon-origin strains and 40-100% similarities among gull-origin E.coli strains.
    CONCLUSIONS: This study revealed that gulls and pigeons carry MDR E. coli isolates, which may pose a risk to animal and human health by contaminating the environment with their feces. However, a large-scale epidemiological study investigating the genetic relationship of the strains from a \"one health\" point of view is warranted to determine the possible transmission patterns of antibiotic-resistant bacteria between wild birds, the environment, humans, and other hosts. Video Abstract.
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  • 文章类型: Journal Article
    2022年夏季,高致病性甲型流感(H5N1)病毒到达了肯特岛上的鲱鱼(Larusargentatus亚种smithsonianus)繁殖群,新不伦瑞克省,加拿大。实时监测显示,自限性爆发,死亡率低。积极的海鸟监测对于监测这种有限的疫情至关重要,保护海鸟,追踪人畜共患传播途径。
    In summer 2022, highly pathogenic influenza A(H5N1) virus reached the herring gull (Larus argentatus subspecies smithsonianus) breeding colony on Kent Island, New Brunswick, Canada. Real-time monitoring revealed a self-limiting outbreak with low mortality. Proactive seabird surveillance is crucial for monitoring such limited outbreaks, protecting seabirds, and tracing zoonotic transmission routes.
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  • 文章类型: Journal Article
    在当前的生物多样性危机中,下降物种的基因组资源的可用性可以为驱动种群下降的因素提供重要的见解。90年代初,黑腿Kittiwake(RissaTridactyla),远洋海鸥广泛分布在北极,亚北极和温带,在整个分布范围内的海面温度突然变暖之后,人口急剧下降,目前被IUCN列为脆弱。Kittiwakes长期以来一直是生理学领域研究的重点,生态学,和生态毒理学,并且是北极和亚北极海洋生态系统中波动的生态条件的主要指标。我们使用PacBioHiFi测序的组合为黑腿kittiwake提供了高质量的染色体水平注释参考基因组和注释,Bionano光学地图,Hi-C读数和RNA-Seq数据。最终组装跨越32条染色体的1.35Gbp,支架N50为88.21Mbp,BUSCO的完整性为97.4%。这种基因组组装大大提高了先前基因组草图的质量,显示了5倍的连续性增加和更完整的注释。使用这种新的染色体水平参考基因组和三个Charadriiformes的染色体水平组装,我们发现了几种谱系特异性染色体融合和裂变,但是没有发现共同的重新安排,这表明染色体间重排在Charadriiformes多样化中很常见。这种新的高质量基因组组装将使群体基因组,转录组,以及在广泛研究的哨兵物种中进行的表型-基因型关联研究,这可能为全球变化对海洋系统的影响提供重要的见解。
    Amidst the current biodiversity crisis, the availability of genomic resources for declining species can provide important insights into the factors driving population decline. In the early 1990s, the black-legged kittiwake (Rissa tridactyla), a pelagic gull widely distributed across the arctic, subarctic, and temperate zones, suffered a steep population decline following an abrupt warming of sea surface temperature across its distribution range and is currently listed as Vulnerable by the International Union for the Conservation of Nature. Kittiwakes have long been the focus for field studies of physiology, ecology, and ecotoxicology and are primary indicators of fluctuating ecological conditions in arctic and subarctic marine ecosystems. We present a high-quality chromosome-level reference genome and annotation for the black-legged kittiwake using a combination of Pacific Biosciences HiFi sequencing, Bionano optical maps, Hi-C reads, and RNA-Seq data. The final assembly spans 1.35 Gb across 32 chromosomes, with a scaffold N50 of 88.21 Mb and a BUSCO completeness of 97.4%. This genome assembly substantially improves the quality of a previous draft genome, showing an approximately 5× increase in contiguity and a more complete annotation. Using this new chromosome-level reference genome and three more chromosome-level assemblies of Charadriiformes, we uncover several lineage-specific chromosome fusions and fissions, but find no shared rearrangements, suggesting that interchromosomal rearrangements have been commonplace throughout the diversification of Charadriiformes. This new high-quality genome assembly will enable population genomic, transcriptomic, and phenotype-genotype association studies in a widely studied sentinel species, which may provide important insights into the impacts of global change on marine systems.
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  • 文章类型: Journal Article
    在本研究中,肝脏,收集了黄腿鸥(Larusmichahellis)的肾脏和脂肪组织。样品用于确定肝脏和肾脏中重金属/类金属之间的关系(Hg,Cd,Pb,Se和As)或脂肪组织中的持久性有机污染物(7种PCB和11种有机氯农药),具有氧化应激的生物标志物(CAT,GPx,GR,GSH,GST,MDA)在两个内脏器官中进行了分析。研究了三个可能的影响变量:年龄,性别和采样面积。因此,仅根据采样面积发现统计学差异(P<0.05,P<0.01),在两个器官中发现的三个研究区域之间存在差异。在肝脏中发现显着正相关(P<0.01)(Hgvs.商品及服务税;Sevs.MDA)和肾脏(Asvs.GR;Asvs.GPx;PCB52vs.CAT;PCB138vs.CAT)。相关性的稀缺性表明,在动物中发现的污染物水平不足以引发氧化水平的影响。
    In the present study, livers, kidneys and adipose tissue of Yellow-legged Gull (Larus michahellis) were collected. Samples were used to determine relationships between heavy metals/metalloids in liver and kidneys (Hg, Cd, Pb, Se and As) or persistent organic pollutants in adipose tissue (7 PCBs and 11 organochlorine pesticides) with biomarkers of oxidative stress (CAT, GPx, GR, GSH, GST, MDA) analysed in both internal organs. Three possible influencing variables have been studied: age, sex and sampling area. As a result, statistically significant differences (P < 0.05, P < 0.01) were only found according to the sampling area, with differences among the three studied areas found in both organs. Significant positive correlations (P < 0.01) were found in liver (Hg vs. GST; Se vs. MDA) and in kidney (As vs. GR; As vs. GPx; PCB52 vs. CAT; PCB138 vs. CAT). The scarcity in correlations suggests that the levels of pollutants found in animals were not high enough to trigger an effect at the oxidative level.
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  • 文章类型: Journal Article
    最近的一项研究表明,候鸟可能是禽类轮状病毒A(RVA)在全球传播的原因。然而,关于候鸟中保留的RVA类型知之甚少。在这项研究中,为了获得候鸟中RVA菌株的信息,我们鉴定了一个RVA菌株,Ho374,在来自海鸥物种的粪便样品中检测到(Larussp。).遗传分析表明,该菌株的所有11个基因均被分类为新基因型(G28-P[39]-I21-R14-C14-M13-A24-N14-T16-E21-H16)。这清楚地表明,禽类RVA的遗传多样性比以前认识到的要大。我们的发现强调了对保留在候鸟中的RVA菌株进行调查的必要性,包括海鸥.
    A recent study demonstrated the possibility that migratory birds are responsible for the global spread of avian rotavirus A (RVA). However, little is known about what types of RVAs are retained in migratory birds. In this study, to obtain information on RVA strains in migratory birds, we characterised an RVA strain, Ho374, that was detected in a faecal sample from a gull species (Larus sp.). Genetic analysis revealed that all 11 genes of this strain were classified as new genotypes (G28-P[39]-I21-R14-C14-M13-A24-N14-T16-E21-H16). This clearly indicates that the genetic diversity of avian RVAs is greater than previously recognised. Our findings highlight the need for investigations of RVA strains retained in migratory birds, including gulls.
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  • 文章类型: Journal Article
    耐碳青霉烯类肠杆菌(CRE)是全球公共卫生的威胁,然而,环境在CRE流行病学中的作用仍然难以捉摸。鉴于野生鸟类可以获得CRE,可能是在受人为影响的地区觅食,并可能有助于在环境中维护和传播CRE,来自不同地区和时间点的分离株的时空比较可能有助于阐明流行病学信息.因此,我们从从海鸥中机会收集的粪便样品中表征了CRE的基因组多样性(Larusspp。)居住在阿拉斯加(美国),智利,西班牙,土耳其,和乌克兰以及在巴基斯坦采样的黑色风筝(Milvusmigrans),并评估了时空传播模式的证据。在采样地点内和采样地点之间,发现了高多样性的碳青霉烯酶,包括肺炎克雷伯菌碳青霉烯酶(KPC),新德里金属β-内酰胺酶(NDM),氧嘧啶酶(OXA),维罗纳整合子金属β-内酰胺酶(VIM)。尽管样本之间的大多数基因组比较没有提供空间传播的证据,我们确实找到了在阿拉斯加传播的有力证据,西班牙,和土耳其。我们还在阿拉斯加和巴基斯坦收集的样本中发现了时间传播的有力证据,尽管大多数CRE克隆是暂时性的,并且在纵向收集样品的位置之间没有重复检测到。从西班牙和乌克兰的海鸥中分离出产生碳青霉烯酶的高毒力肺炎克雷伯氏菌,一些分离株具有抗微生物药物抗性基因,可对多达10种不同的抗生素类别产生抗性。包括粘菌素.我们的结果与野生鸟类对CRE的本地获取一致,其空间传播受中间传播途径的影响,可能涉及人类。此外,我们的结果支持这样一个前提,即人为相关的野鸟可能是了解当地人群临床相关抗菌素耐药性负担的良好前哨.
    Carbapenem resistant Enterobacteriaceae (CRE) are a threat to public health globally, yet the role of the environment in the epidemiology of CRE remains elusive. Given that wild birds can acquire CRE, likely from foraging in anthropogenically impacted areas, and may aid in the maintenance and dissemination of CRE in the environment, a spatiotemporal comparison of isolates from different regions and timepoints may be useful for elucidating epidemiological information. Thus, we characterized the genomic diversity of CRE from fecal samples opportunistically collected from gulls (Larus spp.) inhabiting Alaska (USA), Chile, Spain, Turkey, and Ukraine and from black kites (Milvus migrans) sampled in Pakistan and assessed evidence for spatiotemporal patterns of dissemination. Within and among sampling locations, a high diversity of carbapenemases was found, including Klebsiella pneumoniae carbapenemase (KPC), New Delhi metallo-beta-lactamase (NDM), oxacillinase (OXA), and Verona integron Metallo beta-lactamase (VIM). Although the majority of genomic comparisons among samples did not provide evidence for spatial dissemination, we did find strong evidence for dissemination among Alaska, Spain, and Turkey. We also found strong evidence for temporal dissemination among samples collected in Alaska and Pakistan, though the majority of CRE clones were transitory and were not repeatedly detected among locations where samples were collected longitudinally. Carbapenemase-producing hypervirulent K. pneumoniae was isolated from gulls in Spain and Ukraine and some isolates harbored antimicrobial resistance genes conferring resistance to up to 10 different antibiotic classes, including colistin. Our results are consistent with local acquisition of CRE by wild birds with spatial dissemination influenced by intermediary transmission routes, likely involving humans. Furthermore, our results support the premise that anthropogenically-associated wild birds may be good sentinels for understanding the burden of clinically-relevant antimicrobial resistance in the local human population.
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  • 文章类型: Journal Article
    Gulls are ubiquitous in urban areas due to a growing reliance on anthropogenic feeding sites, which has led to changes in their abundance, distribution, and migration ecology, with implications for disease transmission. Gulls offer a valuable model for testing hypotheses regarding the dynamics of influenza A virus (IAV) - for which gulls are a natural reservoir in urban areas. We sampled sympatric populations of Ring-billed (Larus delawarensis), Herring (L. argentatus), and Great Black-backed Gulls (L. marinus) along the densely populated Atlantic rim of North America to understand how IAV transmission is influenced by drivers such as annual cycle, host species, age, habitat type, and their interplay. We found that horizontal transmission, rather than vertical transmission, played an outsized role in the amplification of IAV due to the convergence of gulls from different breeding grounds and age classes. We detected overlapping effects of age and season in our prevalence model, identifying juveniles during autumn as the primary drivers of the seasonal epidemic in gulls. Gulls accumulated immunity over their lifespan, however short-term fluctuations in seroprevalence were observed, suggesting that migration may impose limits on the immune system to maintain circulating antibodies. We found that gulls in coastal urban habitats had higher viral prevalence than gulls captured inland, correlating with higher richness of waterbird species along the coast, a mechanism supported by our movement data. The peak in viral prevalence in newly fledged gulls that are capable of long-distance movement has important implications for the spread of pathogens to novel hosts during the migratory season as well as for human health as gulls increasingly utilize urban habitats.
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  • 文章类型: Journal Article
    抗菌素抗性基因(ARGs)是环境污染物和人类化指标。我们通过25只野生海鸟灌肠样品中21种质粒介导的ARGs的出现和定量(实时PCR)评估了人类对海洋生态系统的干扰,接受康复治疗后:海带海鸥(Larusdominicanus,n=14)和麦哲伦企鹅(Speniscusmagellanicus,n=11)。总的来说,与麦哲伦企鹅(迁徙的上层非同食)相比,海带海鸥(非迁徙的沿海同食)的抗性值较高。物种之间存在显着差异(分别,海带鸥和麦哲伦企鹅):ARGs发生(blaTEM[p=0.032];tetM[p=0.015];tetA[p=0.003];和sulII[p=0.007]),每个样本的平均ARG数(p=0.031),ARGs平均负荷百分比(aadA[p=0.045],tetA[p=0.031],tetM[p=0.016],blaTEM[p=0.032],sulII[p=0.008]),赋予抗微生物类抗性的基因百分比(β-内酰胺[p=0.036]和磺胺类药物[p=0.033]),赋予一个或多个抗微生物类别抗性的基因的平均数(p=0.024]),多抗性微生物组的百分比(p=0.032),和聚类(p=0.006)。这些差异可能是由于这些物种与生物学和生态学的对比-海鸟中ARG流行病学的关键因素。此外,这是美洲海鸟中有关mecA的第一份报告。需要进一步研究以阐明海鸟中ARGs的发生和多样性,以及它们作为ARGs单一健康链中潜在感染和传播源的作用。
    Antimicrobial resistance genes (ARGs) are environmental pollutants and anthropization indicators. We evaluated human interference in the marine ecosystem through the ocurrence and quantification (real-time PCRs) of 21 plasmid-mediated ARGs in enema samples of 25 wild seabirds, upon admission into rehabilitation: kelp gull (Larus dominicanus, n = 14) and Magellanic penguin (Spheniscus magellanicus, n = 11). Overall, higher resistance values were observed in kelp gulls (non-migratory coastal synanthropic) in comparison with Magellanic penguins (migratory pelagic non-synanthropic). There were significant differences between species (respectively, kelp gull and Magellanic penguin): ARGs occurrence (bla TEM [p = 0.032]; tetM [p = 0.015]; tetA [p = 0.003]; and sulII [p = 0.007]), mean number of ARGs per sample (p = 0.031), ARGs mean load percentage (aadA [p = 0.045], tetA [p = 0.031], tetM [p = 0.016], bla TEM [p = 0.032], sulII [p = 0.008]), percentage of genes conferring resistance to an antimicrobial class (betalactams [p = 0.036] and sulfonamides [p = 0.033]), mean number of genes conferring resistance to one or more antimicrobial classes (p = 0.024]), percentage of multiresistant microbiomes (p = 0.032), and clustering (p = 0.006). These differences are likely due to these species\' contrasting biology and ecology - key factors in the epidemiology of ARGs in seabirds. Additionally, this is the first report of mecA in seabirds in the Americas. Further studies are necessary to clarify the occurrence and diversity of ARGs in seabirds, and their role as potential sources of infection and dispersal within the One Health chain of ARGs.
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