Glutamine-Fructose-6-Phosphate Transaminase (Isomerizing)

谷氨酰胺 - 果糖 - 6 - 磷酸转氨酶 (异构化)
  • 文章类型: Journal Article
    葡萄糖代谢紊乱和蛋白质错误折叠是年龄相关性神经退行性疾病(包括帕金森病)的关键特征。然而,它们的机械联系在很大程度上是未经探索的。己糖胺生物合成途径利用葡萄糖和尿苷-5'-三磷酸生成内质网中蛋白质折叠所需的N-连接聚糖。在这里,我们发现帕金森病患者的中脑培养物积累葡萄糖和尿苷-5'-三磷酸,而N-聚糖合成速率降低。限速酶的选择性还原导致葡萄糖通量受损,GFPT2,通过破坏未折叠蛋白反应和己糖胺途径之间的信号传导。未折叠蛋白反应失败和N-糖基化减少导致未成熟溶酶体水解酶错误折叠和积累,在加速通过己糖胺途径的葡萄糖通量的同时,挽救了水解酶的功能并减少了病理性α-突触核蛋白。我们的数据表明,己糖胺途径整合了葡萄糖代谢与溶酶体活性,其在帕金森病中的失败是通过解偶联未折叠的蛋白反应-己糖胺途径轴而发生的。这些发现提供了通过增强己糖胺途径来恢复蛋白稳定的新方法。
    Disrupted glucose metabolism and protein misfolding are key characteristics of age-related neurodegenerative disorders including Parkinson\'s disease, however their mechanistic linkage is largely unexplored. The hexosamine biosynthetic pathway utilizes glucose and uridine-5\'-triphosphate to generate N-linked glycans required for protein folding in the endoplasmic reticulum. Here we find that Parkinson\'s patient midbrain cultures accumulate glucose and uridine-5\'-triphosphate, while N-glycan synthesis rates are reduced. Impaired glucose flux occurred by selective reduction of the rate-limiting enzyme, GFPT2, through disrupted signaling between the unfolded protein response and the hexosamine pathway. Failure of the unfolded protein response and reduced N-glycosylation caused immature lysosomal hydrolases to misfold and accumulate, while accelerating glucose flux through the hexosamine pathway rescued hydrolase function and reduced pathological α-synuclein. Our data indicate that the hexosamine pathway integrates glucose metabolism with lysosomal activity, and its failure in Parkinson\'s disease occurs by uncoupling of the unfolded protein response-hexosamine pathway axis. These findings offer new methods to restore proteostasis by hexosamine pathway enhancement.
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  • 文章类型: Journal Article
    脂肪酸合成已被广泛研究作为癌症的治疗靶标。包括结直肠癌(CRC)。脂肪酸合成酶(FASN),从头合成脂质的关键酶,在CRC中显著上调,和靶向这种酶的治疗方法目前正在多个临床试验中进行测试。然而,FASN的原癌作用背后的机制仍未完全了解.这里,第一次,我们显示FASN的过表达增加谷氨酰胺-果糖-6-磷酸转氨酶1(GFPT1)和O-连接的N-乙酰葡糖胺转移酶(OGT)的表达,参与己糖胺代谢的酶,以及体外和体内O-GlcNAcylation的水平。始终如一,FASN的表达与人CRC组织中GFPT1和OGT的表达显著相关。shRNA介导的GFPT1和OGT下调在体外抑制细胞增殖和蛋白O-GlcNAcylation水平,GFPT1的敲除导致体内肿瘤生长和转移的显着减少。GFPT1和OGT的药理学抑制导致CRC细胞中细胞增殖和集落形成的显著抑制。总之,我们的结果表明,FASN的过表达增加了GFPT1和OGT的表达以及蛋白O-GlcNAcylation的水平,从而促进CRC的进展;靶向己糖胺生物合成途径可能是该疾病的治疗方法.
    Fatty acid synthesis has been extensively investigated as a therapeutic target in cancers, including colorectal cancer (CRC). Fatty acid synthase (FASN), a key enzyme of de novo lipid synthesis, is significantly upregulated in CRC, and therapeutic approaches of targeting this enzyme are currently being tested in multiple clinical trials. However, the mechanisms behind the pro-oncogenic action of FASN are still not completely understood. Here, for the first time, we show that overexpression of FASN increases the expression of glutamine-fructose-6-phosphate transaminase 1 (GFPT1) and O-linked N-acetylglucosamine transferase (OGT), enzymes involved in hexosamine metabolism, and the level of O-GlcNAcylation in vitro and in vivo. Consistently, expression of FASN significantly correlates with expression of GFPT1 and OGT in human CRC tissues. shRNA-mediated downregulation of GFPT1 and OGT inhibits cellular proliferation and the level of protein O-GlcNAcylation in vitro, and knockdown of GFPT1 leads to a significant decrease in tumor growth and metastasis in vivo. Pharmacological inhibition of GFPT1 and OGT leads to significant inhibition of cellular proliferation and colony formation in CRC cells. In summary, our results show that overexpression of FASN increases the expression of GFPT1 and OGT as well as the level of protein O-GlcNAcylation to promote progression of CRC; targeting the hexosamine biosynthesis pathway could be a therapeutic approach for this disease.
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  • 文章类型: Journal Article
    作为一种重要的功能性单糖,氨基葡萄糖(GlcN)广泛应用于医药等领域,食物营养,和医疗保健。这里,我们报告了一种独特的GlcN生物合成方法,该方法利用工程枯草芽孢杆菌葡糖胺-6-磷酸合酶(BsGlmS)将D-果糖转化为直接生成GlcN。通过使用组合活性位点饱和测试/迭代饱和诱变(CAST/ISM)策略获得的最佳变体是四重突变体S596D/V597G/S347H/G299Q(BsGlmS-BK19),其对D-果糖的催化活性是野生型的1736倍。在使用突变体BK19作为全细胞催化剂时,D-果糖在6h内转化为GlcN,转化率为65.32%,而野生型在相同条件下仅获得0.31%的转化率。实施分子对接和分子动力学模拟以提供对BK19活性增强的潜在机制的见解。重要的是,BsGlmS-BK19变体特异性催化D-果糖,而不需要磷酸化底物,代表了GlcN生物合成的显著进步。
    As an important functional monosaccharide, glucosamine (GlcN) is widely used in fields such as medicine, food nutrition, and health care. Here, we report a distinct GlcN biosynthesis method that utilizes engineered Bacillus subtilis glucosamine-6-phosphate synthase (BsGlmS) to convert D-fructose to directly generate GlcN. The best variant obtained by using a combinatorial active-site saturation test/iterative saturation mutagenesis (CAST/ISM) strategy was a quadruple mutant S596D/V597G/S347H/G299Q (BsGlmS-BK19), which has a catalytic activity 1736-fold that of the wild type toward D-fructose. Upon using mutant BK19 as a whole-cell catalyst, D-fructose was converted into GlcN with 65.32% conversion in 6 h, whereas the wild type only attained a conversion rate of 0.31% under the same conditions. Molecular docking and molecular dynamics simulations were implemented to provide insights into the mechanism underlying the enhanced activity of BK19. Importantly, the BsGlmS-BK19 variant specifically catalyzes D-fructose without the need for phosphorylated substrates, representing a significant advancement in GlcN biosynthesis.
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  • 文章类型: Journal Article
    由多种内在和外在机制引起的免疫抑制微环境给胰腺癌的免疫治疗带来了巨大挑战。我们鉴定了氨基己糖生物合成途径(HBP)的关键酶GFPT2,用转录组测序法进一步证实GFPT2促进巨噬细胞M2极化和胰腺癌恶性表型。HBP是导致尿苷二磷酸N-乙酰葡糖胺(UDP-GlcNAc)生成的葡萄糖代谢途径,其进一步用于蛋白质O-GlcNAcylation。我们证实GFPT2介导的O-GlcNAcylation在调节免疫微环境中起重要作用。通过细胞蛋白质组学,我们确定IL-18是GFPT2下游调节免疫微环境的关键.通过CO-IP和蛋白质质谱,我们证实YBX1是O-GlcNAcylated的,并通过GFPT2介导的O-GlcNAcylation进行核转位。然后,YBX1作为促进IL-18转录的转录因子发挥作用。我们的研究阐明了HBP在癌细胞中的代谢途径与免疫微环境之间的关系。这可能为胰腺癌中HBP脆弱性和免疫治疗的联合治疗提供一些见解。
    The immunosuppressive microenvironment caused by several intrinsic and extrinsic mechanism has brought great challenges to the immunotherapy of pancreatic cancer. We identified GFPT2, the key enzyme in hexosamine biosynthesis pathway (HBP), as an immune-related prognostic gene in pancreatic cancer using transcriptome sequencing and further confirmed that GFPT2 promoted macrophage M2 polarization and malignant phenotype of pancreatic cancer. HBP is a glucose metabolism pathway leading to the generation of uridine diphosphate N-acetylglucosamine (UDP-GlcNAc), which is further utilized for protein O-GlcNAcylation. We confirmed GFPT2-mediated O-GlcNAcylation played an important role in regulating immune microenvironment. Through cellular proteomics, we identified IL-18 as a key downstream of GFPT2 in regulating the immune microenvironment. Through CO-IP and protein mass spectrum, we confirmed that YBX1 was O-GlcNAcylated and nuclear translocated by GFPT2-mediated O-GlcNAcylation. Then, YBX1 functioned as a transcription factor to promote IL-18 transcription. Our study elucidated the relationship between the metabolic pathway of HBP in cancer cells and the immune microenvironment, which might provide some insights into the combination therapy of HBP vulnerability and immunotherapy in pancreatic cancer.
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  • 文章类型: Journal Article
    金属结合蛋白(MBP)在所有生物物种中具有各种重要的生物学作用,许多人类疾病与功能失调的MBP密切相关。这里,我们报告了一种化学蛋白质组学方法,称为“通过热蛋白质组分析记录的金属提取触发的搅动”(METAL-TPP),以全面分析蛋白质组中的MBP。该方法涉及使用螯合剂从MBP中提取金属,并通过热蛋白质组分析监测所得蛋白质稳定性变化。用广谱螯合剂将METAL-TPP应用于人类蛋白质组,EDTA,揭示了一组具有降低的热稳定性的蛋白质,其中包含先前已知的MBP和当前未注释的MBP候选物。一个潜在目标的生化表征,谷氨酰胺-果糖-6-磷酸转氨酶2(GFPT2),显示锌与蛋白质结合,抑制其酶活性并调节己糖胺生物合成途径。用另一种螯合剂对金属-TPP进行分析,TPEN,在蛋白质组中发现了额外的MBP。总的来说,这项研究为MBP的蛋白质组学发现开发了一个强大的工具,并为细胞生物学中金属的功能研究提供了丰富的资源。
    Metal-binding proteins (MBPs) have various and important biological roles in all living species and many human diseases are intricately linked to dysfunctional MBPs. Here, we report a chemoproteomic method named \'metal extraction-triggered agitation logged by thermal proteome profiling\' (METAL-TPP) to globally profile MBPs in proteomes. The method involves the extraction of metals from MBPs using chelators and monitoring the resulting protein stability changes through thermal proteome profiling. Applying METAL-TPP to the human proteome with a broad-spectrum chelator, EDTA, revealed a group of proteins with reduced thermal stability that contained both previously known MBPs and currently unannotated MBP candidates. Biochemical characterization of one potential target, glutamine-fructose-6-phosphate transaminase 2 (GFPT2), showed that zinc bound the protein, inhibited its enzymatic activity and modulated the hexosamine biosynthesis pathway. METAL-TPP profiling with another chelator, TPEN, uncovered additional MBPs in proteomes. Collectively, this study developed a robust tool for proteomic discovery of MBPs and provides a rich resource for functional studies of metals in cell biology.
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  • 文章类型: Journal Article
    三方基序14(TRIM14)是属于E3连接酶TRIM家族的癌蛋白,与非小细胞肺癌(NSCLC)有关的各种肿瘤的进展。然而,目前对TRIM14在NSCLC中的功能和相关机制知之甚少。这里,我们发现,与癌旁组织相比,TRIM14蛋白在肺腺癌组织中下调,在体外和体内都能抑制肿瘤细胞的增殖和迁移。此外,TRIM14可以直接结合谷氨酰胺果糖-6-磷酸酰胺转移酶1(GFAT1),这又导致GFAT1的降解和降低的O-糖基化水平。GFAT1是己糖胺生物合成途径(HBP)的限速步骤中的关键酶。补充N-乙酰-D-葡糖胺可以成功逆转TRIM14对NSCLC细胞生长和迁移的抑制作用。总的来说,我们的数据显示,TRIM14通过GFAT1的泛素化和降解抑制NSCLC细胞增殖和迁移,为TRIM14对HBP的调控提供了新的作用.
    Tripartite Motif 14 (TRIM14) is an oncoprotein that belongs to the E3 ligase TRIM family, which is involved in the progression of various tumors except for non-small cell lung carcinoma (NSCLC). However, little is currently known regarding the function and related mechanisms of TRIM14 in NSCLC. Here, we found that the TRIM14 protein was downregulated in lung adenocarcinoma tissues compared with the adjacent tissues, which can suppress tumor cell proliferation and migration both in vitro and in vivo. Moreover, TRIM14 can directly bind to glutamine fructose-6-phosphate amidotransferase 1 (GFAT1), which in turn results in the degradation of GFAT1 and reduced O-glycosylation levels. GFAT1 is a key enzyme in the rate-limiting step of the hexosamine biosynthetic pathway (HBP). Replenishment of N-acetyl-d-glucosamine can successfully reverse the inhibitory effect of TRIM14 on the NSCLC cell growth and migration as expected. Collectively, our data revealed that TRIM14 suppressed NSCLC cell proliferation and migration through ubiquitination and degradation of GFAT1, providing a new regulatory role for TRIM14 on HBP.
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  • 文章类型: Journal Article
    背景:致癌KRAS突变,非小细胞肺癌(NSCLC)中最常见的突变,是一种侵袭性风险因素,并通过促进葡萄糖导致癌细胞的代谢重编程,谷氨酰胺,脂肪酸吸收和糖酵解。最近,sotorasib被FDA批准为一流的KRAS-G12C抑制剂。然而,Sotorasib仍然有衍生障碍,这对其他KRAS突变类型无效,除了G12C。此外,对索托拉西的抗性可能会发展,要求需要替代治疗策略。
    方法:KRAS突变体,和野生型NSCLC细胞用于体外细胞分析。细胞活力,扩散,通过MTT测量死亡,细胞计数,菌落分析,和用于FACS的膜联蛋白V染色。细胞跟踪器染料用于研究细胞形态,通过全息检查,和共聚焦显微镜。进行RNA测序以鉴定关键靶分子或途径,通过qRT-PCR证实,西方印迹,和代谢产物的UHPLC-MS分析将斑马鱼和小鼠异种移植模型用于体内分析。
    结果:在这项研究中,我们发现nutlin-3a,MDM2拮抗剂,抑制KRAS-PI3K/Akt-mTOR通路并破坏自噬小体和巨噬小体与溶酶体的融合。这进一步阐明了非凋亡性和灾难性巨细胞胞吞作用相关的类甲醇样细胞死亡。被发现依赖于己糖胺生物合成途径的GFPT2,特别是在KRAS突变体/p53野生型NSCLC细胞中。
    结论:这些结果表明nutlin-3a作为治疗KRAS突变/p53野生型NSCLC细胞的替代药物的潜力。
    BACKGROUND: Oncogenic KRAS mutation, the most frequent mutation in non-small cell lung cancer (NSCLC), is an aggressiveness risk factor and leads to the metabolic reprogramming of cancer cells by promoting glucose, glutamine, and fatty acid absorption and glycolysis. Lately, sotorasib was approved by the FDA as a first-in-class KRAS-G12C inhibitor. However, sotorasib still has a derivative barrier, which is not effective for other KRAS mutation types, except for G12C. Additionally, resistance to sotorasib is likely to develop, demanding the need for alternative therapeutic strategies.
    METHODS: KRAS mutant, and wildtype NSCLC cells were used in vitro cell analyses. Cell viability, proliferation, and death were measured by MTT, cell counting, colony analyses, and annexin V staining for FACS. Cell tracker dyes were used to investigate cell morphology, which was examined by holotomograpy, and confocal microscopes. RNA sequencing was performed to identify key target molecule or pathway, which was confirmed by qRT-PCR, western blotting, and metabolite analyses by UHPLC-MS/MS. Zebrafish and mouse xenograft model were used for in vivo analysis.
    RESULTS: In this study, we found that nutlin-3a, an MDM2 antagonist, inhibited the KRAS-PI3K/Akt-mTOR pathway and disrupted the fusion of both autophagosomes and macropinosomes with lysosomes. This further elucidated non-apoptotic and catastrophic macropinocytosis associated methuosis-like cell death, which was found to be dependent on GFPT2 of the hexosamine biosynthetic pathway, specifically in KRAS mutant /p53 wild type NSCLC cells.
    CONCLUSIONS: These results indicate the potential of nutlin-3a as an alternative agent for treating KRAS mutant/p53 wild type NSCLC cells.
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  • 文章类型: Case Reports
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  • 文章类型: Journal Article
    谷氨酰胺果糖-6-磷酸氨基转移酶2(GFPT2)是己糖胺生物合成中的限速酶,参与多种癌症的发生和发展。它在胃癌(GC)中起什么作用尚不清楚。在这项研究中,将哈尔滨医科大学(HMU)-GC队列和癌症基因组图谱(TCGA)数据集的转录组测序数据与HMU-TCGA训练队列相结合,分析GFPT2的生物学功能和临床意义。通过转录组测序数据和公共单细胞测序数据库,在GC免疫微环境中分析GFPT2与免疫细胞和基质细胞的相关性。在细胞系中,GC组织,和组织微阵列,通过蛋白质印迹和免疫组织化学证实GFPT2蛋白表达。GFPT2mRNA在肿瘤中高表达(p<0.001),和GC细胞和肿瘤表达高水平的GFPT2蛋白。与低表达相比,高GFPT2mRNA表达与较高水平的肿瘤侵袭相关,病理分期较高,GC患者预后不良(p=0.02)。在药物敏感性分析中,GFPT2mRNA表达与多种化疗药物敏感性相关,包括多西他赛,紫杉醇,和顺铂.基因富集分析发现GFPT2主要参与细胞外基质受体相互作用通路。估计,CIBERSORT,和ssGSEA算法显示GFPT2与免疫细胞浸润有关。此外,GFPT2更有可能在癌症相关成纤维细胞(CAFs)中表达,GFPT2的高水平表达与四个CAFs评分高度相关(均p<0.05)。最后,基于GFPT2蛋白表达和淋巴结转移率,构建了评估GC患者死亡风险的预后模型.总之,GFPT2在GC中CAFs的功能中起重要作用。它可以作为评价GC预后和免疫浸润的生物标志物。
    Glutamine fructose-6-phosphate aminotransferase 2 (GFPT2) is a rate-limiting enzyme in hexosamine biosynthesis involved in the occurrence and progress of many cancers. What role it plays in gastric cancer (GC) is still unclear. In this study, transcriptome sequencing data from the Harbin Medical University (HMU)-GC cohort and The Cancer Genome Atlas (TCGA) dataset were combined with the HMU-TCGA training cohort to analyze the biological function and clinical significance of GFPT2. The correlation of GFPT2 with immune cells and stromal cells was analyzed in the GC immune microenvironment through transcriptome sequencing data and a public single-cell sequencing database. In cell lines, GC tissues, and the tissue microarray, GFPT2 protein expression was confirmed by western blotting and immunohistochemistry. The mRNA of GFPT2 was highly expressed in the tumor (p < 0.001), and GC cells and tumors expressed high levels of GFPT2 protein. Compared to low expression, high GFPT2 mRNA expression was associated with higher levels of tumor invasion, higher pathological stages, and poor prognosis (p = 0.02) in GC patients. In a drug susceptibility analysis, GFPT2 mRNA expression was associated with multiple chemotherapeutic drug sensitivity, including docetaxel, paclitaxel, and cisplatin. Gene enrichment analysis found that GFPT2 was mainly primarily involved in the extracellular matrix receptor interaction pathway. The ESTIMATE, CIBERSORT, and ssGSEA algorithms showed that GFPT2 was associated with immune cell infiltration. In addition, GFPT2 was more likely to be expressed within cancer-associated fibroblasts (CAFs), and high levels of GFPT2 expression were highly correlated with four CAFs scores (all p < 0.05). Finally, a prognostic model to assess the risk of death in GC patients was constructed based on GFPT2 protein expression and lymph node metastasis rate. In conclusion, GFPT2 plays an essential role in the function of CAFs in GC. It can be used as a biomarker to assess GC prognosis and immune infiltration.
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  • 文章类型: Journal Article
    白色念珠菌是最常见的真菌之一,具有危及生命的全身感染和高死亡率。白色念珠菌的外细胞壁层填充有在与宿主细胞和组织的相互作用中起重要作用的甘露糖蛋白和糖基化多糖部分。葡糖胺-6-磷酸合成酶产生N-乙酰葡糖胺,是白色念珠菌细胞壁的重要化学成分。总的来说,这些组件是必不可少的,以维持细胞的形状和感染。所以,它的破坏会对细胞生长和形态产生严重影响,导致细胞死亡。因此,它被认为是一个很好的抗真菌靶标。在这项研究中,我们已经进行了一种计算机模拟方法来分析从植物中获得的一些多酚的抑制潜力。这些可以被认为在靶向酶葡糖胺-6-磷酸合酶(PDB-2VF5)中是重要的。研究结果表明,茶黄素和3-o-丙二酰葡萄糖苷的复合物的结合亲和力具有显着的对接得分和结合自由能,其次是显着的ADMET参数,可预测多酚作为潜在配体的药物似性和毒性。分子动力学模拟用于测试对接分数的有效性,它表明复合体在模拟期间保持稳定,范围从0到100ns。使用计算机辅助药物设计方法,茶黄素和3-o-丙二酰葡萄糖苷可能对白色念珠菌有效,这将进一步使研究人员能够进行未来的体外和体内研究,根据我们的计算机模拟研究.由RamaswamyH.Sarma沟通。
    Candida albicans is one of the most common species of fungus with life-threatening systemic infections and a high mortality rate. The outer cell wall layer of C. albicans is packed with mannoproteins and glycosylated polysaccharide moieties that play an essential role in the interaction with host cells and tissues. The glucosamine-6-phosphate synthase enzyme produces N-acetylglucosamine, which is a crucial chemical component of the cell wall of Candida albicans. Collectively, these components are essential to maintain the cell shape and for infection. So, its disruption can have serious effects on cell growth and morphology, resulting in cell death. Hence, it is considered a good antifungal target. In this study, we have performed an in silico approach to analyze the inhibitory potential of some polyphenols obtained from plants. Those can be considered important in targeting against the enzyme glucosamine-6-phosphate synthase (PDB-2VF5). The results of the study revealed that the binding affinity of complexes theaflavin and 3-o-malonylglucoside have significant docking scores and binding free energy followed by significant ADMET parameters that predict the drug-likeness property and toxicity of polyphenols as potential ligands. A molecular dynamic simulation was used to test the validity of the docking scores, and it showed that the complex remained stable during the period of the simulation, which ranged from 0 to 100 ns. Theaflavins and 3-o-malonylglucoside may be effective against Candida albicans using a computer-aided drug design methodology that will further enable researchers for future in vitro and in vivo studies, according to our in silico study.Communicated by Ramaswamy H. Sarma.
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