Genetics

遗传学
  • 文章类型: Journal Article
    目的:系统回顾有关单卵(MZ)和二卵(DZ)双胞胎之间睡眠磨牙症(SB)一致性的文献。
    方法:此系统评价的注册是在国际系统评价前瞻性注册(PROSPERO,不。CRD42021251751)。截至2022年7月,搜索了四个数据库,包括PubMed,Scopus,Embase,和WebofScience,以及谷歌学者和OpenGrey中的灰色文献。包括评估任何年龄和性别的MZ和DZ双胞胎中SB的观察性研究。对于偏差风险的评估,JoannaBriggs的检查表被利用了.通过建议分级评估来评估证据的确定性,发展,和评估(等级)系统。进行了汇总和亚组荟萃分析,以估计双胞胎之间SB的一致性(p<0.05)。
    结果:总计,确定了3,155条记录。在定性分析中,包括11项研究;其中,7例纳入荟萃分析.大多数文章表现出低偏倚风险(63.6%)。在总体一致性分析(OR=1.47;95%CI=1.07-2.02)和正一致性分析中,MZ双胞胎之间的SB一致性高于DZ双胞胎之间(OR=1.53;95%CI=1.29-1.81)。在亚组分析中,仅对于报告/自我报告的SB在总体一致性(OR=1.44;95%CI=1.07~1.95)和正一致性(OR=1.55;95%CI=1.28~1.88)方面的显著性仍然存在.在一般一致性分析中观察到证据的确定性低,而对于正一致性观察到中等确定性。
    结论:与DZ双胞胎相比,MZ双胞胎中SB的一致性更高,表明可能的遗传影响条件的发生。
    OBJECTIVE: To systematically review the literature regarding the concordance of sleep bruxism (SB) between monozygotic (MZ) and dizygotic (DZ) twins.
    METHODS: The registration for this systematic review was accomplished in the International Prospective Register of Systematic Reviews (PROSPERO, No. CRD42021251751). As of July 2022, four databases were searched, including PubMed, Scopus, Embase, and Web of Science, as well as the grey literature in Google Scholar and OpenGrey. Observational studies evaluating SB in MZ and DZ twins of any age and sex were included. For the evaluation of the risk of bias, the Joanna Briggs checklist was utilized. The certainty of evidence was assessed via the Grading of Recommendations Assessment, Development, and Evaluation (GRADE) system. Pooled and subgroup meta-analyses were performed to estimate concordance of SB ​​between twins (p < 0.05).
    RESULTS: In total, 3,155 records were identified. In the qualitative analysis, eleven studies were included; of these, seven were included in the meta-analysis. The majority of the articles exhibited a low risk of bias (63.6%). Greater SB concordance was observed between MZ twins than between DZ twins in the analysis of general concordance (OR = 1.47; 95% CI = 1.07-2.02) and also positive concordance (OR = 1.53; 95% CI = 1.29-1.81). Within the subgroup analyses, the significance of the findings remained only for the reported/self-reported SB regarding general concordance (OR = 1.44; 95% CI = 1.07-1.95) and positive concordance (OR = 1.55; 95% CI = 1.28-1.88). Low certainty of the evidence was observed for the general concordance analysis, while moderate certainty was observed for the positive concordance.
    CONCLUSIONS: There was a higher concordance of SB in MZ twins compared to DZ twins, indicating a possible genetic influence on the condition\'s occurrence.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

    求助全文

  • 文章类型: Journal Article
    应用染料了解感染的病因激发了抗菌化学疗法和第一波抗菌药物。第二波抗菌药物的发现是由天然产物的快速发现推动的,现在占目前抗菌药物的69%。但是现在已经发现了最普遍的天然产物,必须筛选107种新的居住在土壤中的细菌物种,以发现一类新的天然产物。因此,而不是第三波抗菌药物的发现,现在有一个发现瓶颈。与数十亿年的微生物拮抗作用所产生的天然产物不同,广阔的合成化学空间仍然需要通过抗菌药物的治疗科学进行人工管理-对小分子如何与细菌生理学相互作用的系统理解,影响所需的表型,并使主机受益。细菌分子遗传学可以阐明与治疗发展相关的病原体生物学,但它也可以直接应用于理解具有新作用机制的新化学试剂的机制和责任。因此,通过将化学专业知识与细菌感染生物学的系统解剖相结合,可以实现抗菌药物发现的下一阶段。面对雄心勃勃的努力,寻找来自自然界或新自然界的新分子来治愈细菌感染,现代化学生物学和分子遗传学提供的能力可用于寻找新靶标的化学调节剂,以规避普遍的抗性机制。
    The application of dyes to understanding the aetiology of infection inspired antimicrobial chemotherapy and the first wave of antibacterial drugs. The second wave of antibacterial drug discovery was driven by rapid discovery of natural products, now making up 69% of current antibacterial drugs. But now with the most prevalent natural products already discovered, ∼107 new soil-dwelling bacterial species must be screened to discover one new class of natural product. Therefore, instead of a third wave of antibacterial drug discovery, there is now a discovery bottleneck. Unlike natural products which are curated by billions of years of microbial antagonism, the vast synthetic chemical space still requires artificial curation through the therapeutics science of antibacterial drugs - a systematic understanding of how small molecules interact with bacterial physiology, effect desired phenotypes, and benefit the host. Bacterial molecular genetics can elucidate pathogen biology relevant to therapeutics development, but it can also be applied directly to understanding mechanisms and liabilities of new chemical agents with new mechanisms of action. Therefore, the next phase of antibacterial drug discovery could be enabled by integrating chemical expertise with systematic dissection of bacterial infection biology. Facing the ambitious endeavour to find new molecules from nature or new-to-nature which cure bacterial infections, the capabilities furnished by modern chemical biology and molecular genetics can be applied to prospecting for chemical modulators of new targets which circumvent prevalent resistance mechanisms.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

    求助全文

  • 文章类型: Journal Article
    背景:胸主动脉瘤(TAA)与显著的发病率和死亡率相关。尽管有TAA家族史的个体经常接受临床分子遗传学检测,患有非综合征性TAA的成年人通常不进行遗传原因评估.我们试图了解在单个中心具有非综合征性TAA的成年个体队列中种系和体细胞镶嵌变异的遗传贡献。
    结果:在马萨诸塞州总医院接受非综合征性TAA治疗的一百八十一名60岁以下的连续患者对与TAA及其相关功能通路相关的114个候选基因进行了深度(>500倍)靶向测序。来自354个年龄和性别匹配的没有TAA的个体的样本也进行了测序,2:1匹配。我们发现种系显著富集(比值比[OR],2.44,P=4.6×10-6[95%CI,1.67-3.58])以及体细胞花叶病变(OR,4.71,P=0.026[95%CI,1.20-18.43])在有和没有TAA的个体之间。可能的遗传原因存在于24%的非综合征性TAA,其中21%来自种系变异,3%来自体细胞花叶病等位基因。我们队列中最常见的3个突变基因是FLNA(编码FilaminA),NOTCH3(编码Notch受体3),和FBN1(编码纤溶蛋白-1)。在TAA个体中,错义和功能变异丧失的频率增加。
    结论:在近四分之一的TAA非综合征成年人中发现了可能的显性作用遗传变异。我们的发现表明TAA的遗传结构比预期的更广泛,并且基因检测可以改善非综合征性TAA成人的护理和临床管理。
    BACKGROUND: Thoracic aortic aneurysm (TAA) is associated with significant morbidity and mortality. Although individuals with family histories of TAA often undergo clinical molecular genetic testing, adults with nonsyndromic TAA are not typically evaluated for genetic causes. We sought to understand the genetic contribution of both germline and somatic mosaic variants in a cohort of adult individuals with nonsyndromic TAA at a single center.
    RESULTS: One hundred eighty-one consecutive patients <60 years who presented with nonsyndromic TAA at the Massachusetts General Hospital underwent deep (>500×) targeted sequencing across 114 candidate genes associated with TAA and its related functional pathways. Samples from 354 age- and sex-matched individuals without TAA were also sequenced, with a 2:1 matching. We found significant enrichments for germline (odds ratio [OR], 2.44, P=4.6×10-6 [95% CI, 1.67-3.58]) and also somatic mosaic variants (OR, 4.71, P=0.026 [95% CI, 1.20-18.43]) between individuals with and without TAA. Likely genetic causes were present in 24% with nonsyndromic TAA, of which 21% arose from germline variants and 3% from somatic mosaic alleles. The 3 most frequently mutated genes in our cohort were FLNA (encoding Filamin A), NOTCH3 (encoding Notch receptor 3), and FBN1 (encoding Fibrillin-1). There was increased frequency of both missense and loss of function variants in TAA individuals.
    CONCLUSIONS: Likely contributory dominant acting genetic variants were found in almost one quarter of nonsyndromic adults with TAA. Our findings suggest a more extensive genetic architecture to TAA than expected and that genetic testing may improve the care and clinical management of adults with nonsyndromic TAA.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

    求助全文

  • 文章类型: Journal Article
    成纤维细胞生长因子受体1(FGFR1)信号的激活改善了动物和人类的代谢健康,而失活导致小鼠糖尿病。关于FGFR1信号传导在人类代谢健康中的作用的直接人类基因证据尚未完全确定。
    我们假设具有天然存在的FGFR1变体(“自然实验”)的个体将表现出葡萄糖失调。
    具有罕见FGFR1变体和非携带者对照的参与者。使用按基因型召回的方法,与27名非携带者对照相比,我们检查了9名具有罕见FGFR1有害变异的个体的β细胞功能和胰岛素敏感性。在生殖内分泌单位和哈佛生殖医学中心的频繁采样的静脉葡萄糖耐量试验中,马萨诸塞州总医院。与对照组相比,FGFR1突变携带者在胰岛素敏感性较低的情况下表现出更高的β细胞功能。
    这些研究结果表明,受损的FGFR1信号可能有助于糖尿病发病机制的早期胰岛素抵抗阶段,并支持FGFR1信号通路作为改善人类代谢健康的治疗靶标的候选性。
    UNASSIGNED: Activation of fibroblast growth factor receptor 1 (FGFR1) signaling improves the metabolic health of animals and humans, while inactivation leads to diabetes in mice. Direct human genetic evidence for the role of FGFR1 signaling in human metabolic health has not been fully established.
    UNASSIGNED: We hypothesized that individuals with naturally occurring FGFR1 variants (\"experiments of nature\") will display glucose dysregulation.
    UNASSIGNED: Participants with rare FGFR1 variants and noncarrier controls. Using a recall-by-genotype approach, we examined the β-cell function and insulin sensitivity of 9 individuals with rare FGFR1 deleterious variants compared to 27 noncarrier controls, during a frequently sampled intravenous glucose tolerance test at the Reproductive Endocrine Unit and the Harvard Center for Reproductive Medicine, Massachusetts General Hospital. FGFR1-mutation carriers displayed higher β-cell function in the face of lower insulin sensitivity compared to controls.
    UNASSIGNED: These findings suggest that impaired FGFR1 signaling may contribute to an early insulin resistance phase of diabetes pathogenesis and support the candidacy of the FGFR1 signaling pathway as a therapeutic target for improving the human metabolic health.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

       PDF(Pubmed)

  • 文章类型: News
    暂无摘要。
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

    求助全文

  • 文章类型: Journal Article
    在过去的四十年里,已经在类风湿性关节炎患者队列中进行了大量的遗传关联研究.这些研究强调了疾病发病机理的关键方面并提出了因果机制。在这次审查中,我们讨论了我们对类风湿关节炎易感性遗传结构的理解的主要进展,严重程度和治疗反应,并解释遗传学如何支持当前的疾病发病机制和结果模型。我们概述了未来的研究方向,比如孟德尔随机化,并提出了许多临床翻译的潜在途径,包括风险和结果预测,将患者分层为治疗反应组和药物应用。
    In the past four decades, a plethora of genetic association studies have been carried out in cohorts of patients with rheumatoid arthritis. These studies have highlighted key aspects of disease pathogenesis and suggested causal mechanisms. In this review, we discuss major advances in our understanding of the genetic architecture of rheumatoid arthritis susceptibility, severity and treatment response and explain how genetics supports current models of disease pathogenesis and outcome. We outline future research directions, like Mendelian randomisation, and present a number of potential avenues for clinical translation, including risk and outcome prediction, patient stratification into treatment response groups and pharmacological applications.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

    求助全文

  • 文章类型: Journal Article
    系统性血管炎包括广泛的以血管中不同程度的炎症为特征的病症。虽然血管炎的病因尚不清楚,积累的数据表明,它是由某些环境因素的并发在遗传倾向个体中触发的。遗传成分的重要性一直得到家族聚集的证据的支持,不同种族的患病率不同,以及近年来报道的与疾病易感性和严重程度的多种遗传关联。大多数血管炎中最强的关联信号对应于HLA区域内的遗传变异,提示免疫系统在其病理生理学中的重要作用。然而,每种类型的血管炎都有不同的定义HLA关联标记,可能是由于疾病特异性差异的抗原驱动。此外,位于HLA区域之外的其他遗传多态性在对不同血管炎的易感性中起重要作用。最近的研究评估了不同血管炎之间明显的共同遗传易感性。未来的研究应该集中在鉴定遗传标记,这些标记可以作为早期诊断的可靠生物标志物。预后,和系统性血管炎的治疗反应。
    Systemic vasculitis encompasses a wide range of conditions characterized by varying degrees of inflammation in blood vessels. Although the etiology of vasculitis remains unclear, accumulated data suggest that it is triggered in genetically predisposed individuals by the concurrence of certain environmental factors. The importance of the genetic component has been consistently supported by evidence of familial aggregation, differential prevalence by ethnicity, and multiple genetic associations with disease susceptibility and severity reported in recent years. The strongest association signals in most vasculitides correspond to genetic variants within the HLA region, suggesting an important role of the immune system in its pathophysiology. However, each type of vasculitis has distinct defining HLA association markers, likely due to disease-specific differences in antigenic drivers. Furthermore, other genetic polymorphisms located outside the HLA region play an important role in susceptibility to different vasculitides. More recent research has assessed the shared genetic susceptibility evident across different vasculitides. Future studies should focus on the identification of genetic markers that can serve as reliable biomarkers for early diagnosis, prognosis, and treatment response in systemic vasculitis.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

    求助全文

  • 文章类型: Journal Article
    线粒体网络的动态性对于满足细胞不断变化的代谢和能量需求至关重要。线粒体裂变促进线粒体的降解和分布,而线粒体融合通过线粒体成分的互补维持线粒体功能。以前,我们已经报道了线粒体网络是管状的,互联,年轻时组织良好,健康的秀丽隐杆线虫,但随着年龄的增长和与年龄相关的神经退行性疾病的模型变得支离破碎和混乱。在这项工作中,我们研究了通过普遍过表达线粒体裂变基因drp-1或线粒体融合基因fzo-1和eat-3,单独或联合表达增加线粒体裂变或线粒体融合能力的影响。然后我们测量了线粒体功能,线粒体网络形态学,生理率,抗应力,和寿命。令人惊讶的是,我们发现线粒体分裂或融合机制的过表达均导致线粒体片段化增加.同样,线粒体分裂和线粒体融合过表达菌株都延长了寿命和增加了抗逆性,在线粒体融合过表达菌株的情况下,这似乎至少部分是由于这些菌株中多种细胞弹性途径的上调。总的来说,我们的工作表明,增加线粒体裂变或融合基因的表达可以延长寿命,并改善生物恢复能力,而不会促进年轻线粒体网络形态的维持。这项工作强调了线粒体对复原力和长寿的重要性。
    The dynamicity of the mitochondrial network is crucial for meeting the ever-changing metabolic and energy needs of the cell. Mitochondrial fission promotes the degradation and distribution of mitochondria, while mitochondrial fusion maintains mitochondrial function through the complementation of mitochondrial components. Previously, we have reported that mitochondrial networks are tubular, interconnected, and well-organized in young, healthy C. elegans, but become fragmented and disorganized with advancing age and in models of age-associated neurodegenerative disease. In this work, we examine the effects of increasing mitochondrial fission or mitochondrial fusion capacity by ubiquitously overexpressing the mitochondrial fission gene drp-1 or the mitochondrial fusion genes fzo-1 and eat-3, individually or in combination. We then measured mitochondrial function, mitochondrial network morphology, physiologic rates, stress resistance, and lifespan. Surprisingly, we found that overexpression of either mitochondrial fission or fusion machinery both resulted in an increase in mitochondrial fragmentation. Similarly, both mitochondrial fission and mitochondrial fusion overexpression strains have extended lifespans and increased stress resistance, which in the case of the mitochondrial fusion overexpression strains appears to be at least partially due to the upregulation of multiple pathways of cellular resilience in these strains. Overall, our work demonstrates that increasing the expression of mitochondrial fission or fusion genes extends lifespan and improves biological resilience without promoting the maintenance of a youthful mitochondrial network morphology. This work highlights the importance of the mitochondria for both resilience and longevity.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

    求助全文

  • 文章类型: Journal Article
    目的:成骨不全症(OI)是一组表型和遗传异质性结缔组织疾病,具有相似的骨骼异常,导致骨骼脆性和变形。本研究旨在通过全外显子组测序(WES)研究OI患者的分子遗传学病因,并确定基因型与表型之间的关系。
    方法:对年龄在0至18岁之间的病例进行了COL1A1和COL1A2和WES的多重连接依赖性探针扩增(MLPA)分析,这些病例在使用靶向下一代测序组前无法确定遗传病因,包括13个基因(COL1A1,COL1A2,IFITM5,SERPINF1,CRTAP,P3H1,PPIB,SERPINH1,FKBP10,SP7,BMP1,MBTPS2,PLOD2)负责OI。
    结果:本研究包括来自10个不同家庭的12名患者(女/男:4/8)。在6个(50%)家庭中,注意到近亲婚姻。根据Sillence分类进行临床分型;3例(25%)患者被认为是I型,7(58.3%)III型,和2(16.7%)IV型。在患者的MLPA分析中未检测到COL1A1和COL1A2基因的缺失/重复。12例患者通过WES进行分子分析,其中6个(50%),在3种不同基因(FKBP10,P3H1和WNT1)中鉴定出一种致病变异.在所有基因中检测到的两个(33.3%)变体以前在文献中没有报道,并且基于预测工具被认为是有害的。在6个案例中,在致病基因中未检测到变异.
    结论:这项研究显示了罕见的OI类型的临床和分子特征;通过WES分析确定了6例(50%)12例患者的遗传病因。此外,OI基因中的两个变异体已经被鉴定,为文学做出贡献。
    OBJECTIVE: Osteogenesis imperfecta (OI) is a group of phenotypically and genetically heterogeneous connective tissue disorders that share similar skeletal anomalies causing bone fragility and deformation. This study aimed to investigate the molecular genetic etiology and to determine the relationship between genotype and phenotype in OI patients with whole exome sequencing (WES).
    METHODS: Multiplex-Ligation dependent Probe Amplification (MLPA) analysis of COL1A1 and COL1A2 and WES were performed on cases between the ages of 0 and 18 whose genetic etiology could not be determined before using a targeted next-generation sequencing panel, including 13 genes (COL1A1, COL1A2, IFITM5, SERPINF1, CRTAP, P3H1, PPIB, SERPINH1, FKBP10, SP7, BMP1, MBTPS2, PLOD2) responsible for OI.
    RESULTS: Twelve patients (female/male: 4/8) from 10 different families were included in the study. In 6 (50 %) families, consanguineous marriage was noted. The clinical typing based on Sillence classification; 3 (25 %) patients were considered to be type I, 7 (58.3 %) type III, and 2 (16.7 %) type IV. Deletion/duplication wasn\'t detected in the COL1A1 and COL1A2 genes in the MLPA analysis of the patients. Twelve patients were molecularly analyzed by WES, and in 6 (50 %) of them, a disease-causing variant in three different genes (FKBP10, P3H1, and WNT1) was identified. Two (33.3 %) detected variants in all genes have not been previously reported in the literature and were considered deleterious based on prediction tools. In 6 cases, no variants were detected in disease-causing genes.
    CONCLUSIONS: This study demonstrates rare OI types\' clinical and molecular features; genetic etiology was determined in 6 (50 %) 12 patients with the WES analysis. In addition, two variants in OI genes have been identified, contributing to the literature.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

    求助全文

  • 文章类型: Journal Article
    哮喘是一种气道的慢性炎症性疾病,是异质性和多因素的,使其准确表征成为一个复杂的过程。因此,识别与哮喘相关的遗传变异,发现赋予发病风险的组学之间的分子相互作用,将有助于我们解开与哮喘发病机制有关的生物学途径。
    我们试图使用机器学习方法开发哮喘的预测遗传小组。
    我们测试了3种变量选择方法:Boruta\的算法,根据其各自的P值,排名前200位的全基因组关联研究标记,和弹性净回归。选择了十种不同的算法进行分类测试。基于分类算法之间的联合得分建立了预测小组。
    两种变量选择方法,Boruta和全基因组关联研究,在生成的平均准确度方面具有统计学上的相似性,而弹性网的整体表现最差。预测性遗传小组完成了155个单核苷酸变异,准确率为91.18%,灵敏度92.75%,和89.55%的特异性使用支持向量机算法。所用的标记物范围从已知的单核苷酸变体到文献中先前未描述的那些。我们的研究显示了创建遗传预测面板的潜力,每个标记都有量身定制的惩罚,帮助识别复杂结果的最佳机器学习方法。
    该方法能够有效地对哮喘和非哮喘进行分类,证明其在临床预测和诊断中的潜在实用性。
    UNASSIGNED: Asthma is a chronic inflammatory disease of the airways that is heterogeneous and multifactorial, making its accurate characterization a complex process. Therefore, identifying the genetic variations associated with asthma and discovering the molecular interactions between the omics that confer risk of developing this disease will help us to unravel the biological pathways involved in its pathogenesis.
    UNASSIGNED: We sought to develop a predictive genetic panel for asthma using machine learning methods.
    UNASSIGNED: We tested 3 variable selection methods: Boruta\'s algorithm, the top 200 genome-wide association study markers according to their respective P values, and an elastic net regression. Ten different algorithms were chosen for the classification tests. A predictive panel was built on the basis of joint scores between the classification algorithms.
    UNASSIGNED: Two variable selection methods, Boruta and genome-wide association studies, were statistically similar in terms of the average accuracies generated, whereas elastic net had the worst overall performance. The predictive genetic panel was completed with 155 single-nucleotide variants, with 91.18% accuracy, 92.75% sensitivity, and 89.55% specificity using the support vector machine algorithm. The markers used range from known single-nucleotide variants to those not previously described in the literature. Our study shows potential in creating genetic prediction panels with tailored penalties per marker, aiding in the identification of optimal machine learning methods for intricate results.
    UNASSIGNED: This method is able to classify asthma and nonasthma effectively, proving its potential utility in clinical prediction and diagnosis.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

       PDF(Pubmed)

公众号