Genetic Privacy

遗传隐私
  • 文章类型: Journal Article
    全基因组关联研究(GWAS)是识别与特定性状相关的遗传因素的重要工具。然而,伦理约束阻止了遗传信息的直接交换,提示需要隐私保护解决方案。为了解决这些问题,早期的工作是基于密码机制,如同态加密,安全多方计算,和差异隐私。最近,联合学习已成为实现安全和协作GWAS计算的有前途的解决方案。这项工作提供了现有的GWAS隐私保护方法的广泛概述,主要关注协作和分布式方法。这项调查全面分析了现有方法面临的挑战,其局限性,以及对设计高效解决方案的见解。
    Genome-wide association studies (GWAS) serve as a crucial tool for identifying genetic factors associated with specific traits. However, ethical constraints prevent the direct exchange of genetic information, prompting the need for privacy preservation solutions. To address these issues, earlier works are based on cryptographic mechanisms such as homomorphic encryption, secure multi-party computing, and differential privacy. Very recently, federated learning has emerged as a promising solution for enabling secure and collaborative GWAS computations. This work provides an extensive overview of existing methods for GWAS privacy preserving, with the main focus on collaborative and distributed approaches. This survey provides a comprehensive analysis of the challenges faced by existing methods, their limitations, and insights into designing efficient solutions.
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  • 文章类型: Journal Article
    背景:商业基因检测的在线报价,也称为直接对消费者的基因测试(DTC-GT),使公民能够根据他们的基因概况了解他们的健康和疾病风险。DTC-GT产品通常由服务或方面的组合组成,包括广告,信息,DNA分析,以及医疗或生活方式建议。对DTC-GT服务的风险和收益进行了广泛的辩论和研究,但是缺乏评估DTC-GT服务和援助政策的工具。这导致决策者之间的不确定性,执法人员,以及监管机构如何确保和平衡公共安全和自主权,以及这三个方面对公众的责任。
    目的:本研究旨在开发一个框架,概述导致政策问题的DTC-GT的各个方面,并帮助提供有关DTC-GT服务的政策指导。
    方法:我们进行了3个步骤:(1)综合文献综述,以确定Embase和Medline的DTC-GT服务对消费者和社会的风险和收益(2014年1月至2022年6月),(2)在消费者旅程的不同步骤中构建收益和风险,(3)制定政策指导清单。
    结果:DTC-GT服务的潜在风险和收益来自134篇论文,并分为6个阶段。总之,这些阶段被称为消费者旅程:(1)暴露,(2)预测试信息,(3)DNA分析,(4)数据管理,(5)后测信息,(6)个人和社会影响。DTC-GT服务评估清单包括8个主题,涵盖38个可能在DTC-GT服务中引发政策问题的项目。主题包括以下几个方面:一般服务内容,有效性和质量保证,潜在的数据和隐私风险,科学证据和稳健性,以及所提供信息的质量。
    结论:消费者旅程和清单都将DTC-GT产品细分为可能影响和损害个人和公共卫生的关键方面,安全,和自主性。这个框架有助于政策制定者,监管者,执法人员开发了解释的方法,评估,并在DTC-GT服务市场中发挥作用。
    BACKGROUND: The online offer of commercial genetic tests, also called direct-to-consumer genetic tests (DTC-GTs), enables citizens to gain insight into their health and disease risk based on their genetic profiles. DTC-GT offers often consist of a combination of services or aspects, including advertisements, information, DNA analysis, and medical or lifestyle advice. The risks and benefits of DTC-GT services have been debated and studied extensively, but instruments that assess DTC-GT services and aid policy are lacking. This leads to uncertainty among policy makers, law enforcers, and regulators on how to ensure and balance both public safety and autonomy and about the responsibilities these 3 parties have toward the public.
    OBJECTIVE: This study aimed to develop a framework that outlines aspects of DTC-GTs that lead to policy issues and to help provide policy guidance regarding DTC-GT services.
    METHODS: We performed 3 steps: (1) an integrative literature review to identify risks and benefits of DTC-GT services for consumers and society in Embase and Medline (January 2014-June 2022), (2) structuring benefits and risks in different steps of the consumer journey, and (3) development of a checklist for policy guidance.
    RESULTS: Potential risks and benefits of DTC-GT services were mapped from 134 papers and structured into 6 phases. In summary, these phases were called the consumer journey: (1) exposure, (2) pretest information, (3) DNA analysis, (4) data management, (5) posttest information, and (6) individual and societal impact. The checklist for evaluation of DTC-GT services consisted of 8 themes, covering 38 items that may raise policy issues in DTC-GT services. The themes included the following aspects: general service content, validity and quality assurance, potential data and privacy risks, scientific evidence and robustness, and quality of the provided information.
    CONCLUSIONS: Both the consumer journey and the checklist break the DTC-GT offer down into key aspects that may impact and compromise individual and public health, safety, and autonomy. This framework helps policy makers, regulators, and law enforcers develop methods to interpret, assess, and act in the DTC-GT service market.
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  • 文章类型: Journal Article
    在中国法律的法律背景下,遗传数据是复杂权利的客体。在私法层面,基因数据包含个人信息,因此受到《民法典》和《个人信息保护法》的保护;在公法层面,遗传数据是体现公共利益和国家利益的重要遗传资源,这也应受到生物安全法和数据安全法等公共法律的约束。最近发布的"人类遗传资源管理条例"对审批和备案程序进行了细化,以促进我国遗传数据的利用。目前,中国仍然缺乏足够的基因数据隐私保护,“知情同意”和“匿名化”系统无法有效工作。在改进的道路上,我们应该打破个人主义的约束,从三个层面加强基因数据隐私保护:制定专门立法,发挥团体组织和公益诉讼制度的功能。
    In the legal context of Chinese law, genetic data are an object of complex rights. At the level of private law, genetic data contain personal information, thus being protected by the Civil Code and the Personal Information Protection Law. At the level of public law, genetic data are important genetic resource that embody both public and national interests, which should also be regulated by public laws such as the Biosecurity Law and the Data Security Law. The recently issued Regulation on the Administration of Human Genetic Resources have refined the approval and record procedure, in order to promote the utilization of genetic data in China. At present, China still lacks sufficient protection for genetic data privacy, and the \"informed consent\" and \"anonymization\" system cannot work effectively. On the path of improvement, we should break constraints of individualism and start from the following three levels to strengthen genetic data privacy protection: formulating specialized legislation and leveraging the functions of group organizations and public interest litigation systems.
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    文章类型: Journal Article
    本节探讨了将基因组研究转化为基因组医学所涉及的挑战。在澳大利亚国家健康基因组学框架中已经确定了许多优先事项来应对这些挑战。负责收集,storage,基因组数据的使用和管理是这些优先事项之一,是本节的主要主题。最近发布的Genomical,澳大利亚的数据共享平台,被用作案例研究,以说明在解决这一优先事项时可以向卫生保健部门提供的援助类型。本节首先介绍了国家框架和其他涉及基因组医学发展的驱动因素。然后,本节将检查关键的道德,基因组学中的法律和社会因素,特别关注隐私和同意。最后,该部分检查了如何使用Genomical来帮助确保向基因组医学的转变是道德上的,在法律和社会上都是合理的,它优化了基因组和信息技术的进步。
    This section explores the challenges involved in translating genomic research into genomic medicine. A number of priorities have been identified in the Australian National Health Genomics Framework for addressing these challenges. Responsible collection, storage, use and management of genomic data is one of these priorities, and is the primary theme of this section. The recent release of Genomical, an Australian data-sharing platform, is used as a case study to illustrate the type of assistance that can be provided to the health care sector in addressing this priority. The section first describes the National Framework and other drivers involved in the move towards genomic medicine. The section then examines key ethical, legal and social factors at play in genomics, with particular focus on privacy and consent. Finally, the section examines how Genomical is being used to help ensure that the move towards genomic medicine is ethically, legally and socially sound and that it optimises advances in both genomic and information technology.
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  • 文章类型: Journal Article
    背景:遗传数据被广泛认为是固有可识别的。然而,遗传数据集有许多形状和大小,隐私攻击的可行性取决于其具体内容。评估基因数据的重新识别风险是复杂的,然而,缺乏支持数据处理器执行此类评估的指南或建议。
    目的:本研究旨在全面了解遗传数据的隐私漏洞,并创建一个可指导数据处理器评估遗传数据集隐私风险的摘要。
    方法:我们进行了两步搜索,我们首先确定了在2017年至2023年之间发表的21篇关于基因组隐私的评论,然后分析了评论中引用的所有参考文献(n=1645),以确定42项独特的原始研究研究,这些研究证明了对遗传数据的隐私攻击.然后,我们评估了用于这些攻击的遗传数据的类型和组成部分,以及实施这些攻击所需的努力和资源以及成功的可能性。
    结果:从我们的文献综述来看,我们得出了遗传数据的9个非互斥特征,这些特征既是任何遗传数据集固有的,也是关于隐私风险的信息:生物模态,实验测定,数据格式或处理级别,种系与体细胞变异含量,单核苷酸多态性的含量,短串联重复,汇总样本度量,结构变体,和罕见的单核苷酸变异。
    结论:根据我们的文献综述,对这9个特征的评估涵盖了遗传数据的绝大多数隐私关键方面,因此为评估遗传数据风险提供了基础和指导。
    BACKGROUND: Genetic data are widely considered inherently identifiable. However, genetic data sets come in many shapes and sizes, and the feasibility of privacy attacks depends on their specific content. Assessing the reidentification risk of genetic data is complex, yet there is a lack of guidelines or recommendations that support data processors in performing such an evaluation.
    OBJECTIVE: This study aims to gain a comprehensive understanding of the privacy vulnerabilities of genetic data and create a summary that can guide data processors in assessing the privacy risk of genetic data sets.
    METHODS: We conducted a 2-step search, in which we first identified 21 reviews published between 2017 and 2023 on the topic of genomic privacy and then analyzed all references cited in the reviews (n=1645) to identify 42 unique original research studies that demonstrate a privacy attack on genetic data. We then evaluated the type and components of genetic data exploited for these attacks as well as the effort and resources needed for their implementation and their probability of success.
    RESULTS: From our literature review, we derived 9 nonmutually exclusive features of genetic data that are both inherent to any genetic data set and informative about privacy risk: biological modality, experimental assay, data format or level of processing, germline versus somatic variation content, content of single nucleotide polymorphisms, short tandem repeats, aggregated sample measures, structural variants, and rare single nucleotide variants.
    CONCLUSIONS: On the basis of our literature review, the evaluation of these 9 features covers the great majority of privacy-critical aspects of genetic data and thus provides a foundation and guidance for assessing genetic data risk.
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  • 文章类型: Journal Article
    遗传歧视是一种不断发展的现象,影响尊严等基本人权,正义与公平。虽然,在过去,已经提出了更好地概念化遗传歧视的各种定义,这些都无法捕捉到这一现象的几个关键方面。从这个角度来看,我们探索跨学科遗传歧视的定义,考虑对这些定义的批评,并说明其他形式的歧视和污名化如何以影响个人的方式复合遗传歧视,团体和系统。我们提出了遗传歧视的细微差别和包容性定义,这反映了其多方面的影响,在面对不断变化的社会背景和不断发展的科学时,这些影响应保持相关性。我们认为,应采用我们的定义作为指导性学术框架,以促进有关遗传歧视的科学和政策讨论,并支持寻求解决这一现象的法律和行业政策的制定。
    Genetic discrimination is an evolving phenomenon that impacts fundamental human rights such as dignity, justice and equity. Although, in the past, various definitions to better conceptualize genetic discrimination have been proposed, these have been unable to capture several key facets of the phenomenon. In this Perspective, we explore definitions of genetic discrimination across disciplines, consider criticisms of such definitions and show how other forms of discrimination and stigmatization can compound genetic discrimination in a way that affects individuals, groups and systems. We propose a nuanced and inclusive definition of genetic discrimination, which reflects its multifaceted impact that should remain relevant in the face of an evolving social context and advancing science. We argue that our definition should be adopted as a guiding academic framework to facilitate scientific and policy discussions about genetic discrimination and support the development of laws and industry policies seeking to address the phenomenon.
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  • 文章类型: Journal Article
    基因组数据具有巨大的医学进步潜力,但由于其敏感性,需要严格的安全措施,以遵守数据保护法。这种冲突在全基因组关联研究(GWAS)中尤为明显,该研究依赖于大量的基因组数据来改善医学诊断。为了确保他们的利益和足够的数据安全性,我们提出了一种联合方法,结合隐私增强技术,利用对联合学习和法律法规的系统审查的结果,并将其应用于GWAS。
    Genomic data holds huge potential for medical progress but requires strict safety measures due to its sensitive nature to comply with data protection laws. This conflict is especially pronounced in genome-wide association studies (GWAS) which rely on vast amounts of genomic data to improve medical diagnoses. To ensure both their benefits and sufficient data security, we propose a federated approach in combination with privacy-enhancing technologies utilising the findings from a systematic review on federated learning and legal regulations in general and applying these to GWAS.
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  • 文章类型: Editorial
    对数据道德使用的担忧,隐私,随着监管机构开始对数据隐私和保护实施更严格的控制,数据危害在许多司法管辖区都是首要问题,以及人工智能(AI)的使用。尽管让公司负责其数据和数据驱动技术的部署的努力在很大程度上受到了学术界和民间社会的欢迎,人们越来越认识到个人数据权利的限制,考虑到科技巨头的联系能力,监视,目标,并对群体做出推论。关于集体数据权是否存在的问题,以及他们如何得到认可和保护,已经为研究人员提供了肥沃的土壤,但尚未渗透到关于数据权利和监管的更广泛的论述中。
    Concerns about the ethical use of data, privacy, and data harms are front of mind in many jurisdictions as regulators move to impose tighter controls on data privacy and protection, and the use of artificial intelligence (AI). Although efforts to hold corporations to account for their deployment of data and data-driven technologies have been largely welcomed by academics and civil society, there is a growing recognition of the limits to individual data rights, given the capacity of tech giants to link, surveil, target, and make inferences about groups. Questions about whether collective data rights exist, and how they can be recognized and protected, have provided fertile ground for researchers but have yet to penetrate the broader discourse on data rights and regulation.
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  • 文章类型: Journal Article
    调查遗传谱系(IGG)是一种新的技术,用于识别犯罪嫌疑人和身份不明的死者和活人,引发了争议。在刑事案件中,该技术涉及将假定的犯罪者在犯罪现场留下的遗传信息上传到一个或多个直接面向消费者的遗传家谱数据库,旨在识别犯罪者的遗传亲属,最终,在家谱上找到肇事者。2018年,IGG帮助确定了金州杀手,此后,它已在美国的数百项调查中使用。这里,我们报告了对24名参与IGG的美国人进行的深入访谈的结果,这些结果与该技术的当前实践和预测的未来相关.主要发现包括:强调将IGG作为概念和技术问题限制在铅发电上;支持IGG的私人和很大程度上是自我调节的行业的快速增长;伦理,和政策问题,以及不同程度的争议;以及感知舆论对IGG实践的重大影响。与这些和其他问题相关的IGG战壕中的个人的经验和观点是对正在进行的规范技术的努力的潜在有用投入。
    Investigative genetic genealogy (IGG) is a new technique for identifying criminal suspects and unidentified deceased and living persons that has sparked controversy. In a criminal case, the technique involves uploading genetic information left by a putative perpetrator at the crime scene to one or more direct-to-consumer genetic genealogy databases with the intention of identifying the perpetrator\'s genetic relatives and, eventually, locating the perpetrator on the family tree. In 2018, IGG helped to identify the Golden State Killer, and it has since been used in hundreds of investigations in the United States. Here, we report findings from in-depth interviews with 24 U.S.-based individuals involved in IGG that are relevant to the technique\'s current practice and predicted future. Key findings include: an emphasis on restricting IGG as a conceptual and technical matter to lead generation; the rapid growth of a private and largely self-regulating industry to support IGG; general recognition of three categories of cases associated with distinct practical, ethical, and policy questions, as well as varying degrees of controversy; and the significant influence of perceived public opinion on IGG practice. The experiences and perspectives of individuals in the IGG trenches related to these and other issues are potentially useful inputs to ongoing efforts to regulate the technique.
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  • DOI:
    文章类型: Journal Article
    一旦有人被诊断出患有遗传异常或疾病,这些信息对他们的亲生亲属来说非常有价值。它可以让他们获得预防性治疗或做出明智的决定,比如是否有一个亲生孩子。然而,当原始家庭成员拒绝向处于危险中的亲戚透露该信息时,他们对病人保密的权利和他们亲属的知情权之间产生了冲突。Aotearoa新西兰缺乏一个具体的,向有风险的亲属披露遗传信息的可行机制。本文回顾了非自愿披露遗传信息所涉及的理论和实践问题,为Aotearoa提出了一条新的道路。它认为当前,西方对自治的态度是个人权利,不承担对他人的义务,这不再是对遗传信息保密的适当理由。相反,被诊断患有遗传异常或疾病的患者只有在他们对隐私有合理期望的情况下才有权保密-通过权衡支持和反对披露的客观利益来确定。这种方法认识到,当我们对最终共享的家庭信息行使自主权时,我们应该考虑与他人的密切关系。
    Once someone is diagnosed with a genetic abnormality or disorder, that information can be extremely valuable to their biological relatives. It may allow them to access preventive treatment or make informed decisions, such as whether to have a biological child or not. However, when the original family member refuses to disclose that information to at-risk relatives, a conflict arises between their right to patient confidentiality and their relatives\' right to know. Aotearoa New Zealand lacks a specific, workable mechanism for disclosing genetic information to at-risk relatives. This article traverses the theoretical and practical issues involved in non-consensual disclosure of genetic information to suggest a new path for Aotearoa. It argues that the current, Western attitude of autonomy as an individual right free from obligations to others is no longer an appropriate justification for confidentiality over genetic information. Instead, patients diagnosed with a genetic abnormality or disorder should only be entitled to confidentiality where they have a reasonable expectation of privacy - determined by weighing the objective interests for and against disclosure. This approach recognises that we ought to consider our close relationships with others when we exercise autonomy over what is ultimately shared family information.
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