The combination of memory forensics and deep learning for malware detection has achieved certain progress, but most existing methods convert process dump to images for classification, which is still based on process byte feature classification. After the malware is loaded into memory, the original byte features will change. Compared with byte features, function call features can represent the behaviors of malware more robustly. Therefore, this article proposes the ProcGCN model, a deep learning model based on DGCNN (Deep Graph Convolutional Neural Network), to detect malicious processes in memory images. First, the process dump is extracted from the whole system memory image; then, the Function Call Graph (FCG) of the process is extracted, and feature vectors for the function node in the FCG are generated based on the word bag model; finally, the FCG is input to the ProcGCN model for classification and detection. Using a public dataset for experiments, the ProcGCN model achieved an accuracy of 98.44% and an F1 score of 0.9828. It shows a better result than the existing deep learning methods based on static features, and its detection speed is faster, which demonstrates the effectiveness of the method based on function call features and graph representation learning in memory forensics.

Convolutional Neural Networks (CNNs) have demonstrated outstanding performance in various domains, such as face recognition, object detection, and image segmentation. However, the lack of transparency and limited interpretability inherent in CNNs pose challenges in fields such as medical diagnosis, autonomous driving, finance, and military applications. Several studies have explored the interpretability of CNNs and proposed various post-hoc interpretable methods. The majority of these methods are feature-based, focusing on the influence of input variables on outputs. Few methods undertake the analysis of parameters in CNNs and their overall structure. To explore the structure of CNNs and intuitively comprehend the role of their internal parameters, we propose an Attribution Graph-based Interpretable method for CNNs (AGIC) which models the overall structure of CNNs as graphs and provides interpretability from global and local perspectives. The runtime parameters of CNNs and feature maps of each image sample are applied to construct attribution graphs (At-GCs), where the convolutional kernels are represented as nodes and the SHAP values between kernel outputs are assigned as edges. These At-GCs are then employed to pretrain a newly designed heterogeneous graph encoder based on Deep Graph Infomax (DGI). To comprehensively delve into the overall structure of CNNs, the pretrained encoder is used for two types of interpretable tasks: (1) a classifier is attached to the pretrained encoder for the classification of At-GCs, revealing the dependency of At-GC\'s topological characteristics on the image sample categories, and (2) a scoring aggregation (SA) network is constructed to assess the importance of each node in At-GCs, thus reflecting the relative importance of kernels in CNNs. The experimental results indicate that the topological characteristics of At-GC exhibit a dependency on the sample category used in its construction, which reveals that kernels in CNNs show distinct combined activation patterns for processing different image categories, meanwhile, the kernels that receive high scores from SA network are crucial for feature extraction, whereas low-scoring kernels can be pruned without affecting model performance, thereby enhancing the interpretability of CNNs.

Non-Euclidean data, such as social networks and citation relationships between documents, have node and structural information. The Graph Convolutional Network (GCN) can automatically learn node features and association information between nodes. The core ideology of the Graph Convolutional Network is to aggregate node information by using edge information, thereby generating a new node feature. In updating node features, there are two core influencing factors. One is the number of neighboring nodes of the central node; the other is the contribution of the neighboring nodes to the central node. Due to the previous GCN methods not simultaneously considering the numbers and different contributions of neighboring nodes to the central node, we design the adaptive attention mechanism (AAM). To further enhance the representational capability of the model, we utilize Multi-Head Graph Convolution (MHGC). Finally, we adopt the cross-entropy (CE) loss function to describe the difference between the predicted results of node categories and the ground truth (GT). Combined with backpropagation, this ultimately achieves accurate node classification. Based on the AAM, MHGC, and CE, we contrive the novel Graph Adaptive Attention Network (GAAN). The experiments show that classification accuracy achieves outstanding performances on Cora, Citeseer, and Pubmed datasets.

Graphitic carbon nitride mutated with metal nanoparticles has captivated great interest as an effective fluorescent sensor for the detection of harmful ions present in water. In the present work, bulk-gCN was synthesized using melamine as precursor, and further Au-gCN nanocomposite were fabricated via in-situ direct reduction deposition method. The structural, morphological, compositional, stability and optical properties of bulk gCN and Au-gCN nanocomposite were examined using various scattering and spectroscopic techniques such as HRTEM, XPS, XRD and SEM. The synthesized bulk gCN straggles during selectivity studies with different cations and anions because of its uneven surface morphology, however in Au-gCN gold nanoparticles are uniformly distributed on the gCN sheets which results in its enhanced selectivity over bulk gCN. This leads to the fabrication of an optical sensor for Fe3+ and Cr2O72- ions with limit of detection of 4.62 and 2.77 μM, respectively. The sensing of Fe3+ ions corresponds to the photoinduced electron transfer (PET) mechanism, while the detection of chromate species is associated with an inner filter effect (IFE). The practical applicability of the sensor was also evaluated for different environmental water samples. The high stability, sensitivity, and specificity of Au-gCN nanocomposite make it a potential fluorescent probe for Fe3+ and Cr2O72- ions in water samples.

Deciphering the targets of microRNAs (miRNAs) in plants is crucial for comprehending their function and the variation in phenotype that they cause. As the highly cell-specific nature of miRNA regulation, recent computational approaches usually utilize expression data to identify the most physiologically relevant targets. Although these methods are effective, they typically require a large sample size and high-depth sequencing to detect potential miRNA-target pairs, thereby limiting their applicability in improving plant breeding. In this study, we propose a novel miRNA-target prediction framework named kmerPMTF (k-mer-based prediction framework for plant miRNA-target). Our framework effectively extracts the latent semantic embeddings of sequences by utilizing k-mer splitting and a deep self-supervised neural network. We construct multiple similarity networks based on k-mer embeddings and employ graph convolutional networks to derive deep representations of miRNAs and targets and calculate the probabilities of potential associations. We evaluated the performance of kmerPMTF on four typical plant datasets: Arabidopsis thaliana, Oryza sativa, Solanum lycopersicum, and Prunus persica. The results demonstrate its ability to achieve AUPRC values of 84.9%, 91.0%, 80.1%, and 82.1% in 5-fold cross-validation, respectively. Compared with several state-of-the-art existing methods, our framework achieves better performance on threshold-independent evaluation metrics. Overall, our study provides an efficient and simplified methodology for identifying plant miRNA-target associations, which will contribute to a deeper comprehension of miRNA regulatory mechanisms in plants.

Addressing the challenges of suboptimal model performance and excessive parameters and operations in the optimization of energy storage power plants utilizing Graph Convolutional Network (GCN), this paper introduces a novel approach - the packet-switched graph convolutional network. Initially, a GCN extreme learning machine is established. Drawing inspiration from this solid foundation, we have innovatively crafted a group exchange graph convolution module. This module leverages group graph convolution techniques to amalgamate unique node feature information, tailored to diverse topology graph matrices based on various groupings. This innovative approach ensures that information flows freely and effectively among distinct groupings. Furthermore, we have designed a cutting-edge timing depth separation convolution module, comprising two innovative components. The first component introduces timing depth separation convolution, revolutionizing the original timing convolution module. The second component, the packet-switching graph convolutional network, revolutionizes the time sequence depth separation convolution process. It achieves this by employing 1 × 1 convolutional layers between different feature fusion packets, enabling seamless information exchange between distinct packets. Experimental results demonstrate the efficacy of the proposed model, with root mean square error (RMSE) metrics and root mean square error (MAE) metrics for single-step prediction reaching 46.08 and 26.22 at 60 min, respectively. In multi-step testing, the proposed model exhibits a 14.71 % reduction in RMSE error at the 15-min scale and a 9.29 % reduction at the 60-min scale compared to the benchmark model. This performance improvement enhances the operational efficiency and reliability of the energy storage plant, particularly under dynamic changes in the time series.

In Human-Robot Interaction (HRI), accurate 3D hand pose and mesh estimation hold critical importance. However, inferring reasonable and accurate poses in severe self-occlusion and high self-similarity remains an inherent challenge. In order to alleviate the ambiguity caused by invisible and similar joints during HRI, we propose a new Topology-aware Transformer network named HandGCNFormer with depth image as input, incorporating prior knowledge of hand kinematic topology into the network while modeling long-range contextual information. Specifically, we propose a novel Graphformer decoder with an additional Node-offset Graph Convolutional layer (NoffGConv). The Graphformer decoder optimizes the synergy between the Transformer and GCN, capturing long-range dependencies and local topological connections between joints. On top of that, we replace the standard MLP prediction head with a novel Topology-aware head to better exploit local topological constraints for more reasonable and accurate poses. Our method achieves state-of-the-art 3D hand pose estimation performance on four challenging datasets, including Hands2017, NYU, ICVL, and MSRA. To further demonstrate the effectiveness and scalability of our proposed Graphformer Decoder and Topology aware head, we extend our framework to HandGCNFormer-Mesh for the 3D hand mesh estimation task. The extended framework efficiently integrates a shape regressor with the original Graphformer Decoder and Topology aware head, producing Mano parameters. The results on the HO-3D dataset, which contains various and challenging occlusions, show that our HandGCNFormer-Mesh achieves competitive results compared to previous state-of-the-art 3D hand mesh estimation methods.

Spatial transcriptomics (ST), containing gene expression with fine-grained (i.e., different windows) spatial location within tissue samples, has become vital in developing innovative treatments. Traditional ST technology, however, rely on costly specialized commercial equipment. Addressing this, our article aims to creates a cost-effective, virtual ST approach using standard tissue images for gene expression prediction, eliminating the need for expensive equipment. Conventional approaches in this field often overlook the long-distance spatial dependencies between different sample windows or need prior gene expression data. To overcome these limitations, we propose the Edge-Relational Window-Attentional Network (ErwaNet), enhancing gene prediction by capturing both local interactions and global structural information from tissue images, without prior gene expression data. ErwaNet innovatively constructs heterogeneous graphs to model local window interactions and incorporates an attention mechanism for global information analysis. This dual framework not only provides a cost-effective solution for gene expression predictions but also obviates the necessity of prior knowledge gene expression information, a significant advantage in the field of cancer research where it enables a more efficient and accessible analytical paradigm. ErwaNet stands out as a prior-free and easy-to-implement Graph Convolution Network (GCN) method for predicting gene expression from tissue images. Evaluation of the two public breast cancer datasets shows that ErwaNet, without additional information, outperforms the state-of-the-art (SOTA) methods. Code is available at https://github.com/biyecc/ErwaNet.

Hepatocellular carcinoma (HCC) is one of the most common cancers in the world which ranks fourth in cancer deaths. Primary pathological necrosis is an effective prognostic indicator for hepatocellular carcinoma. We propose a GCN-based approach that mimics the pathologist\'s perspective for global assessment of necrosis tissue distribution to analyze patient survival. Specifically, we introduced a graph convolutional neural network to construct a spatial map with necrotic tissue and tumor tissue as graph nodes, aiming to mine the contextual information between necrotic tissue in pathological sections. We used 1381 slides from 303 patients from the First Affiliated Hospital of Zhejiang University School to train the model and used TCGA-LIHC for external validation. The C-index of our method outperforms the baseline by about 4.45%, which proves that the information about the spatial distribution of necrosis learned by GCN is meaningful for guiding patient prognosis.

BACKGROUND: Accurate and timely assessment of children\'s developmental status is crucial for early diagnosis and intervention. More accurate and automated developmental assessments are essential due to the lack of trained health care providers and imprecise parental reporting. In various areas of development, gross motor development in toddlers is known to be predictive of subsequent childhood developments.
OBJECTIVE: The purpose of this study was to develop a model to assess gross motor behavior and integrate the results to determine the overall gross motor status of toddlers. This study also aimed to identify behaviors that are important in the assessment of overall gross motor skills and detect critical moments and important body parts for the assessment of each behavior.
METHODS: We used behavioral videos of toddlers aged 18-35 months. To assess gross motor development, we selected 4 behaviors (climb up the stairs, go down the stairs, throw the ball, and stand on 1 foot) that have been validated with the Korean Developmental Screening Test for Infants and Children. In the child behavior videos, we estimated each child\'s position as a bounding box and extracted human keypoints within the box. In the first stage, the videos with the extracted human keypoints of each behavior were evaluated separately using a graph convolutional networks (GCN)-based algorithm. The probability values obtained for each label in the first-stage model were used as input for the second-stage model, the extreme gradient boosting (XGBoost) algorithm, to predict the overall gross motor status. For interpretability, we used gradient-weighted class activation mapping (Grad-CAM) to identify important moments and relevant body parts during the movements. The Shapley additive explanations method was used for the assessment of variable importance, to determine the movements that contributed the most to the overall developmental assessment.
RESULTS: Behavioral videos of 4 gross motor skills were collected from 147 children, resulting in a total of 2395 videos. The stage-1 GCN model to evaluate each behavior had an area under the receiver operating characteristic curve (AUROC) of 0.79 to 0.90. Keypoint-mapping Grad-CAM visualization identified important moments in each behavior and differences in important body parts. The stage-2 XGBoost model to assess the overall gross motor status had an AUROC of 0.90. Among the 4 behaviors, \"go down the stairs\" contributed the most to the overall developmental assessment.
CONCLUSIONS: Using movement videos of toddlers aged 18-35 months, we developed objective and automated models to evaluate each behavior and assess each child\'s overall gross motor performance. We identified the important behaviors for assessing gross motor performance and developed methods to recognize important moments and body parts while evaluating gross motor performance.