Fragmentation rules

碎片规则
  • 文章类型: Journal Article
    烷基甘油(1-O-烷基-sn-甘油)是食品中的微量但关键的脂质。常规脂质组学分析常常忽视烷基甘油分析。在这项研究中,我们开发了一种高覆盖率的假靶向脂质组学方法,用于分析烷基甘油。所开发的方法综合了GC-MS和LC-MS的优点,对烷基甘油类醚脂质进行了全面的分析,借助称为FFIMA(特征片段信息匹配算法)的数据处理Dart包。所开发的方法表现出与传统脂质组学相比的竞争优势,例如更广泛的覆盖范围和更高的准确性。通过三种水产品和三种牛奶对经过验证的方法进行了评估。总共25个烷基甘油,107二酰基甘油醚,21个单酰基甘油醚,28烷基甘油型醚磷脂,在这六种食物中鉴定出35种疟原虫。结果表明,该方法可对广泛的烷基甘油进行全面分析。
    Alkylglycerols (1-O-alkyl-sn-glycerols) are microscale but critical lipids in foods. Conventional lipidomics analysis often loses sight of alkylglycerol analysis. In this study, we developed a high coverage pseudotargeted lipidomics method for analyzing alkylglycerols. The developed method integrated the advantages of GC-MS and LC-MS to profile alkylglycerol-type ether lipids comprehensively, with the help of a data processing Dart package termed FFIMA (Feature Fragments Information Matching Algorithm). The developed method exhibited competitive superiority to conventional lipidomics, such as wider coverage and higher accuracy. The validated method was assessed by three aquatic products and three milks. A total of 25 alkylglycerols, 107 diacylglycerol ethers, 21 monoacylglycerol ethers, 28 alkylglycerol-type ether phospholipids, and 35 plasmalogens were identified in the six foods. The results demonstrated that this method offers a comprehensive analysis of a wide spectrum of alkylglycerols.
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  • 文章类型: Journal Article
    背景:根霉(MR),dauricumdenispermumDC的干燥根茎。(半潜科),已经被用来治疗喉咙痛,肠炎,痢疾,和风湿性关节痛。尽管对其药理作用进行了广泛的研究,体外和体内的化学成分尚未得到彻底研究。
    目的:建立一种高效的MR及其制剂中生物碱的快速分类和鉴别方法,以及口服MR后体内的代谢物。
    方法:使用超高效液相色谱四极杆飞行时间质谱(UPLC-Q-TOF-MS)结合UNFI软件对MR的生物碱和吸收成分进行快速鉴定。此外,总结了MR中不同类型生物碱的特征性碎裂和中性损失,以实现生物碱的快速分类。
    结果:在MR中明确或初步鉴定了总共55种成分。其中,在MR胶囊和片剂中发现了37和31种成分,分别。同时,在大鼠血浆中初步鉴定出109个化合物,尿液和粪便,包括55个原型和54个代谢物。加氢,羟基化,甲基化,葡萄糖醛酸和硫酸盐的结合是生物碱的主要代谢命运。
    结论:建立的数据后处理策略可以大大提高结构识别效率。所得结果为进一步解释临床疗效奠定了基础,MR的作用机制和质量控制。
    BACKGROUND: Menispermi Rhizoma (MR), the dried rhizome of Menispermum dauricum DC. (Menispermaceae), has been used to treat sore throat, enteritis, dysentery, and rheumatic arthralgia. Despite extensive research on its pharmacological effects, the chemical components in vitro and in vivo have not been thoroughly studied.
    OBJECTIVE: To establish an efficient method for rapid classification and identification of alkaloids in MR and its preparations, as well as metabolites in vivo after oral administration of MR.
    METHODS: Rapid identification of alkaloids and absorbed components of MR was performed using ultra-performance liquid chromatography quadrupole time-of-flight mass spectrometry (UPLC-Q-TOF-MS) coupled with UNIFI software. Moreover, the characteristic fragmentations and neutral losses of different types of alkaloids in MR were summarised to realise the rapid classification of alkaloids.
    RESULTS: A total of 55 components were unambiguously or tentatively identified in MR. Among them, 37 and 31 components were found in MR capsules and tablets, respectively. Meanwhile, 109 compounds were tentatively identified in rat plasma, urine and faeces, including 55 prototypes and 54 metabolites. Hydrogenation, hydroxylation, methylation, glucuronic acid and sulphate conjugations were the dominating metabolic fates of alkaloids.
    CONCLUSIONS: The data post-processing strategy established could greatly enhance the structural identification efficiency. The results obtained might lay the foundation for further interpretation of clinical effects, mechanism of action and quality control of MR.
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  • 文章类型: English Abstract
    本研究旨在基于超高效液相色谱-线性四极离子阱-轨道阱质谱(UPLC-LTQ-Orbitrap-MS)对四妙勇安汤的化学成分进行鉴定。通过UPLCBEHC_(18)柱(2.1mm×100mm,1.7μm),流动相为水(含0.1%甲酸)-乙腈,流速为0.4mL·min〜(-1)。采用具有热电喷雾离子(HESI)源的LTQ-Orbitrap-MS以负离子模式收集MS碎片信息。根据参考物质比较,共鉴定出72种化合物,碎片规则,准确的分子量,相关报告和数据库(MassBank和HMDB),包括30个环烯醚萜苷,9有机酸,15类黄酮,10种苯丙素类化合物,7种三萜类化合物,和1个糖类。本研究建立的方法是全面的,快速,准确,有助于总结成分的破碎规律,为揭示四妙勇安汤的活性成分和药效学机制提供参考。
    This study aims to identify the chemical constituents of Simiao Yong\'an Decoction based on ultra-performance liquid chromatography coupled with linear quadrupole ion trap-orbitrap mass spectrometry(UPLC-LTQ-Orbitrap-MS). The elution was performed through a UPLC BEH C_(18) column(2.1 mm × 100 mm, 1.7 μm) with the mobile phase of water(containing 0.1% formic acid)-acetonitrile at a flow rate of 0.4 mL·min~(-1). LTQ-Orbitrap-MS with heat electrospray ion(HESI) source was employed to collect MS fragment information in the negative ion mode. A total of 72 compounds were identified based on reference substance comparison, fragmentation rules, accurate molecular weight, related reports and databases(MassBank and HMDB), including 30 iridoid glycosides, 9 organic acids, 15 flavonoids, 10 phenylpropanoids, 7 triterpenoids, and 1 saccharide. The method established in this study is comprehensive, rapid, and accurate, which can help summarize the fragmentation rules of constituents and provide reference for revealing the active constituents and pharmacodynamic mechanism of Simiao Yong\'an Decoction.
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  • 文章类型: Journal Article
    Lycium barbarum fruit (Goji berry) have been used as a traditional Chinese medicine (TCM) with its outstanding biological and pharmacological activities. Spermidine alkaloids are a major class of bioactive constituents in goji berry, nevertheless, detailed information related to its identification remains scarce. In this study, chemical profiling of spermidines in goji berry was carried out by ultrahigh-performance liquid chromatography-quadrupole time-of-flight mass spectrometry (UPLC-Q-TOF/MS). Four structure types of standards were used to study the comprehensive fragmentation rules of spermidines. Different types of spermidines were identified by distinctive MS/MS fragment ions. Noticeably, it was first proposed that the co-existence of fragment ions at m/z 220 and 222 was the key characteristic for distinguishing spermidine isomers. According to the structural feature of spermidines, a quick, convenient, highly selective strong cation exchange solid-phase extraction (SCX-SPE) combined with RP-LC procedure was developed for selective enrichment and the MS detection compatibility. A total of 41 out of 58 spermidines were tentatively characterized using the established method, of which 26 were reported for the first time from goji berry. This study provides guidelines and references for the identification of spermidines in natural products.
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  • 文章类型: Journal Article
    This experiment was performed to analyze and identify the chemical constituents of Lycii Cortex by UPLC-LTQ-OrbitrapMS. The analysis was performed on a Waters Xbridge Shield RP18( 4. 6 mm×250 mm,5 μm) column with the mobile phase of 0. 1%formic acid( A)-acetonitrile( B) under gradient conditions at a flow rate of 1. 0 m L·min-1 and the temperature maintained at 35 ℃ .Electrospray ionization ion trap time-off light multistage mass spectrometry was applied for qualitative analysis under positive and negative ion modes. The results indicated that 55 compounds consisted of 39 phenolic amides,6 organic acids,3 cyclic peptides,2 coumarins and 5 others. In conclusion,an UPLC-LTQ-Orbitrap-MS method was established to qualitative analysis of Lycii Cortex in this study,and the fragmentation rules of phenolic amides were summarized,which provides a good foundation for further study of Lycii Cortex.
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  • 文章类型: Journal Article
    In this study, a combination of quadrupole time-of-flight mass spectrometry (Q-TOF-MS) and linear trap quadrupole orbitrap mass spectrometry (LTQ-Orbitrap-MS) was performed to investigate the fragmentation behaviors of prenylated flavonoids (PFs) from Artocarpus plants. Fifteen PFs were selected as the model molecules and divided into five types (groups A-E) according to their structural characteristics in terms of the position and existing form of prenyl substitution in the flavone skeleton. The LTQ-Orbitrap-MSn spectra of the [M - H]- ions for these compounds provided a wealth of structural information on the five different types of compounds. The main fragmentation pathways of group A were the ortho effect and retro Diels-Alder (RDA), and common losses of C4H10, CO, and CO2. The compounds in group B easily lose C6H12, forming a stable structure of a 1,4-dienyl group, unlike those in group A. The fragmentation pathway for group C is characterized by obvious 1,4A-, 1,4B- cracking of the C ring. The diagnostic fragmentation for group D is obvious RDA cracking of the C ring and the successive loss of CH3 and H2O in the LTQ-Orbitrap-MSn spectra. Fragmentation with successive loss of CO or CO2, ·CH3, and CH4 in the LTQ-Orbitrap-MSn spectra formed the characteristics of group E. The summarized fragmentation rules were successfully exploited to identify PFs from Artocarpus heterophyllus, a well-known Artocarpus plant, which led to the identification of a total of 47 PFs in this plant.
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  • 文章类型: Journal Article
    Oligostilbenes have attracted much interest due to their intricate structures and diverse bioactivities. In this study, two stilbene dimers, (-)-7,8-cis-ε-viniferin (1) and carasiphenol A (2), and two trimers, suffruticosol A (3) and suffruticosol C (4), were investigated by electrospray ionization ion-trap time-of-flight multistage mass spectrometry (ESI-IT-TOF-MSn). Based on the MSn study, the fragmentation pathways and diagnostic ions of four oligostilbenes in both positive and negative modes were proposed. The consecutive elimination of phenol (C6H6O) and resorcinol (C6H6O2) moieties were the particular dissociation for oligostilbenes due to the presence of 1,2-diphenylethylene nucleus. The present MSn fragmentation study will provide valuable information for the fast characterization of oligostilbenes from complicated natural mixtures.
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  • 文章类型: Journal Article
    Swerilactones H-K (1-4) as four unprecedented secoiridoid trimers represent a new type of natural product, which has attracted much interest of natural chemists due to their novel skeletons and promising bioactivity. In order to well understand their MS fragmentation behaviors, they were investigated by electrospray ionization ion-trap time-of-flight multistage product ion mass spectrometry (ESI-IT-TOF-MS n ) for the first time. The protonated molecules ([M+H]+) of swerilactones J and K, and deprotonated molecules ([M-H]-) of swerilactones H, J and K were readily observed in the conventional single-stage mass spectra (MS); however only the [M+Cl]- ion for swerilactone I was obtained in negative mode. Based on the MS n study, the fragmentation pathways of swerilactones H and I in negative mode, and swerilactones J and K in both positive and negative modes were proposed. The neutral losses of H2O, CO, CO2 and C2H4O moieties are the particular elimination from the precursor ions due to the presence of hydroxyl, δ-lactone and 1-O-ethyl moieties in their structures, of which the retro-Diels-Alder cleavage was the most particular dissociation. The fragment ions at m/z 341 and 291 in negative mode can be considered as the diagnostic ions for secoiridoid trimers. This investigation will provide valuable information for their fast characterization from complicated natural mixtures and extensive understanding their structural architectures.
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  • 文章类型: Evaluation Study
    More than 80 aristolochic acids (AAs) and aristololactams (ALs) have been found in plants of the Aristolochiaceae family, but relatively few have been fully studied. The present study aimed at developing and validating a liquid chromatography tandem mass spectrometry (LC/MS(n)) for the analysis of these compounds. We characterized the fragmentation behaviors of 31 AAs, ALs, and their analogues via high performance liquid chromatography coupled with electrospray ionization mass spectrometry. We summarized their fragmentation rules and used these rules to identify the constituents contained in Aristolochia contorta, Ar. debilis, Ar. manshurensis, Ar. fangchi, Ar. cinnabarina, and Ar. mollissima. The AAs and ALs showed very different MS behaviors. In MS(1) of AAs, the characteristic pseudomolecular ions were [M + NH4](+), [M + H](+), and [M + H - H2O](+). However, only [M + H](+) was found in the MS(1) of ALs, which was simpler than that of AAs. Distinct MS(n)fragmentation patterns were found for AAs and ALs, showing the same skeleton among the different substituent groups. The distribution of the 31 constituents in the 6 species of Aristolochia genus was reported for the first time. 25 Analogues of AAs and ALs were detected in this genus. A hierarchical schemes and a calculating formula of the molecular formula of these nitrophenanthrene carboxylic acids and their lactams were proposed. In conclusion, this method could be applied to identification of similar unknown constituents in other plants.
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  • 文章类型: Journal Article
    正离子模式的高分辨率电喷雾电离离子阱飞行时间串联质谱(HR-ESI-IT-TOF-MS(n))用于确定四种C的准确质量和碎裂途径(19)-二萜生物碱,乌头碱(1),云药碱(2),crassicaulineA(3),和苯甲酰基美松碱(4)。化合物1-4的[M+H](+)离子在常规单级质谱中容易观察到。根据MS(1-6)分析,提出了四种化合物的详细断裂规则。AcOH的中性损失,MeOH,H(2)O,CO,C(2)H(4),由于乙酰基的存在,PhCOOH和p-OMePhCOOH链段是前体离子的特征消除,甲氧基,羟基,N-乙基,结构中的苯甲酰基和对甲氧基-苯甲酰基单元。受益于质量分析仪的高分辨率,明确区分了产物离子中对应于CO或CH(4)片段的28Da的损失。主要取代基的丢失顺序总结为:C(8)-乙酰基>C(16)-甲基>C(15)-羟基>C(6)-甲氧基>C(1)-甲氧基/C(3)-羟基>C(18)-甲氧基>>C(13)-羟基。(16)-甲氧基部分和CO(从烯醇-酮互变异构产生)基团的顺序损失可以被认为是同时具有C(16)-甲氧基和C(15)-羟基的化合物的特征性消除。应用HR-ESI-IT-TOF-MS(n)技术研究C(19)-二萜生物碱的片段化行为为了解其片段化行为提供了有用的信息。
    High-resolution electrospray ionization ion-trap time-of-flight tandem mass spectrometry (HR-ESI-IT-TOF-MS(n)) in positive-ion mode was used to determine the accurate masses and fragmentation pathways of four C(19)-diterpenoid alkaloids, aconitine (1), yunnaconitine (2), crassicauline A (3), and benzoylmesaconine (4). The [M+H](+) ions of compounds 1-4 were readily observed in conventional single-stage mass spectrometry. Based on the MS(1-6) analyses, detailed fragmentation rules of the four compounds were proposed. The neutral losses of AcOH, MeOH, H(2)O, CO, C(2)H(4), PhCOOH and p-OMePhCOOH segments were the characteristic eliminations from the precursor ions due to the presence of acetyl, methoxyl, hydroxyl, N-ethyl, benzoyl and p-methoxyl-benzoyl units in the structures. Benefited from the high resolution of the mass analyzer, the loss of 28 Da corresponding to CO or CH(4) segment in product ions was unambiguously distinguished. The losing sequence of the main substituent groups was summarized as: C(8)-acetyl>C(16)-methotyl>C(15)-hydroxyl>C(6)-methoxyl>C(1)-methoxyl/C(3)-hydroxyl>C(18)-methoxyl>>C(13)-hydroxyl. The sequential loss of (16)-methoxyl moiety and CO (generating from enol-ketone tautomerism) groups could be recognized as the characteristic eliminations for the compounds with C(16)-methoxyl and C(15)-hydroxyl groups simultaneously. The application of HR-ESI-IT-TOF-MS(n) technique to investigate the fragmentation of C(19)-diterpenoid alkaloids provided useful information to understand their fragmentation behaviors.
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