ERLIN2

ERLIN2
  • 文章类型: Journal Article
    背景:前列腺癌(PCa)的转移和侵袭性已经成为与男性健康相关的主要恶性肿瘤威胁。由于其淋巴细胞抑制性质,针对PCa的免疫单一疗法的功效值得怀疑。
    方法:内质网应激-(ERS-)和PCa预后相关基因来自分子特征数据库和癌症基因组图谱数据库。表达式,通过“生存R包”探索关键基因的预后和免疫浸润值,\"rms\",\"xCELL算法\",以及单变量-多变量Cox和LASSO回归分析。使用“共识聚类加R包”进行聚类分析。
    结果:作为ERS相关基因,ERLIN2和CDK5RAP3显示显著表达,预后和临床病理价值。它们被定义为与免疫浸润和反应显着相关的关键基因。列线图由T分期和主要治疗结果构成,通过以下方式构建风险-预后模型:Riskscore=(-0.1918)*ERLIN2+(0.5254)*CDK5RAP3.随后,基于关键基因的预后亚组将高危人群分类为关键基因突变率较低的前癌症亚组(SPOP和MUC16),多种低表达免疫相关分子,和巨噬细胞(M1和M2)表达的差异。最后,通过细胞表型测定和免疫组织化学进一步证实了作为抑癌基因的ERLIN2和作为原癌基因的CDK5RAP3。
    结论:我们确定ERLIN2和CDK5RAP3是ERS相关基因,具有重要的预后和免疫学价值,并将患者分为高危和低危亚组,提供了新的预后标志物,免疫治疗靶点,和预后评估的基础。
    BACKGROUND: The metastasis and aggressive nature of prostate cancer (PCa) has become a major malignancy related threat that concerns men\'s health. The efficacy of immune monotherapy against PCa is questionable due to its lymphocyte-suppressive nature.
    METHODS: Endoplasmic reticulum stress- (ERS-) and PCa-prognosis-related genes were obtained from the Molecular Signatures Database and the Cancer Genome Atlas database. The expression, prognosis and immune infiltration values of key genes were explored by \"survival R package\", \"rms\", \"xCELL algorithm\", and univariate-multivariate Cox and LASSO regression analyses. The \"consensus cluster plus R package\" was used for cluster analysis.
    RESULTS: As ERS-related genes, ERLIN2 and CDK5RAP3 showed significant expressional, prognostic and clinic-pathologic values. They were defined as the key genes significantly correlated with immune infiltration and response. The nomogram was constructed with T-stage and primary treatment outcome, and the risk-prognostic model was constructed in the following way: Riskscore = (- 0.1918) * ERLIN2 + (0.5254) * CDK5RAP3. Subsequently, prognostic subgroups based on key genes classified the high-risk group as a pro-cancer subgroup that had lower mutation rates of critical genes (SPOP and MUC16), multiple low-expression immune-relevant molecules, and differences in macrophages (M1 and M2) expressions. Finally, ERLIN2 as an anti-oncogene and CDK5RAP3 as a pro-oncogene were further confirmed by cell phenotype assays and immunohistochemistry.
    CONCLUSIONS: We identified ERLIN2 and CDK5RAP3 as ERS-related genes with important prognostic and immunologic values, and classified patients between high- and low-risk subgroups, which provided new prognostic markers, immunotherapeutic targets, and basis for prognostic assessments.
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  • 文章类型: Journal Article
    背景:SPG18是由内质网脂筏相关2(ERLIN2)基因突变引起的。常染色体隐性(AR)突变通常与复杂的遗传性痉挛性截瘫(HSP)相关。而常染色体显性(AD)突变可导致纯SPG18。
    目的:定义SPG18的各种临床谱,并评估erlin2(由ERLIN2编码)对寡聚化的主要负面影响,从而导致AR和AD表型之间的差异。
    方法:在具有AD模式的四代谱系中,进行了痉挛性截瘫多基因小组测试。在先证者和健康受试者的成纤维细胞中,用速度梯度测定法分析了erlin2的寡聚化。
    结果:尽管常见的p。在ERLIN2中鉴定的V168M突变,在第二代中观察到向肌萎缩性侧索硬化症(ALS)的表型转化,第三代纯HSP,在第四代出现精神运动性延迟和癫痫的复杂形式。发现Erlin2寡聚化正常。
    结论:我们报告了第一个具有复杂表型的ADSPG18家族,我们排除了V168M对erlin2寡聚化的主要负面影响。因此,我们的数据不支持遗传模式和表型之间的关系的假设,但从遗传和临床角度证实了SPG18的多面性。临床医生应该意识到进行深入临床评估的重要性,以揭示与仅明显纯SPG18表型相关的所有可能表现。我们证实了V168M和ALS之间的基因型-表型相关性,强调了密切随访的价值。
    BACKGROUND: SPG18 is caused by mutations in the endoplasmic reticulum lipid raft associated 2 (ERLIN2) gene. Autosomal recessive (AR) mutations are usually associated with complicated hereditary spastic paraplegia (HSP), while autosomal dominant (AD) mutations use to cause pure SPG18.
    OBJECTIVE: To define the variegate clinical spectrum of the SPG18 and to evaluate a dominant negative effect of erlin2 (encoded by ERLIN2) on oligomerization as causing differences between AR and AD phenotypes.
    METHODS: In a four-generation pedigree with an AD pattern, a spastic paraplegia multigene panel test was performed. Oligomerization of erlin2 was analyzed with velocity gradient assay in fibroblasts of the proband and healthy subjects.
    RESULTS: Despite the common p.V168M mutation identified in ERLIN2, a phenoconversion to amyotrophic lateral sclerosis (ALS) was observed in the second generation, pure HSP in the third generation, and a complicated form with psychomotor delay and epilepsy in the fourth generation. Erlin2 oligomerization was found to be normal.
    CONCLUSIONS: We report the first AD SPG18 family with a complicated phenotype, and we ruled out a dominant negative effect of V168M on erlin2 oligomerization. Therefore, our data do not support the hypothesis of a relationship between the mode of inheritance and the phenotype, but confirm the multifaceted nature of SPG18 on both genetic and clinical point of view. Clinicians should be aware of the importance of conducting an in-depth clinical evaluation to unmask all the possible manifestations associated to an only apparently pure SPG18 phenotype. We confirm the genotype-phenotype correlation between V168M and ALS emphasizing the value of close follow-up.
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  • 文章类型: Journal Article
    ERLIN2和MFN2中的突变导致痉挛型截瘫18(SPG18)和Charcot-Marie-Tooth2A(CMT2A)的发展,分别。这些疾病都可以被称为遗传性轴突病。通过全外显子组测序(WES),有临床重叠的神经系统疾病患者比以往任何时候都获得遗传结果。这项研究描述了一个同时在ERLIN2和MFN2中具有突变的伊朗家族。案例介绍:先证者是一名73岁的男子,自童年后期以来就经历了下肢的虚弱和痉挛。他被诊断为遗传性痉挛性截瘫(HSP)。他的WES鉴定了ERLIN2中的新纯合变体以及MFN2中的已知杂合变体。这些变体与家族成员中的表型共分离。他的妹妹具有类似的表型,只是携带了纯合的ERLIN2变体,然而,他无症状的兄弟和女儿携带MFN2的杂合变体。通过神经传导研究对MFN2变体携带者的重新评估显示,只有先证者的女儿患有周围神经病变。
    这里,使用WES在先证者中检测到两种不同的致病变体,它们在ERLIN2和MFN2中具有不同的遗传模式.不出所料,具有确定的MFN2变体的个体,p.Arg468His,无症状或有轻度表型。这些疾病的共同发生,SPG18和CMT2A,可能导致轻度表型被忽视或其特征被认为是其他疾病症状的一部分。当然,在这种情况下提供遗传咨询可能具有挑战性。这些案例揭示了WES的重要性。
    Mutations in ERLIN2 and MFN2 lead to the development of spastic paraplegia-18 (SPG18) and Charcot-Marie-Tooth type-2A (CMT2A), respectively. These disorders are unified by the fact that both can be termed inherited axonopathies. With whole-exome sequencing (WES), more patients of neurological disorders with clinical overlaps receive a genetic result than ever before. This study describes an Iranian family who harbor mutations in ERLIN2 and MFN2, simultaneously. The proband was a 73-year old man who has experienced weakness and spasticity of lower limbs since late childhood. He was diagnosed with hereditary spastic paraplegia (HSP). His WES identified a novel homozygous variant in ERLIN2 as well as a known heterozygous variant in MFN2. These variants were cosegregated with the phenotypes among the family members. His sister with a similar phenotype just carried the homozygous ERLIN2 variant, whereas, his asymptomatic brother and daughter carried the heterozygous variant of MFN2. Re-evaluation of the MFN2 variant carriers by nerve conduction study revealed that only the proband\'s daughter has peripheral neuropathy. Herein, using WES two distinct disease-causing variants with different modes of inheritance in ERLIN2 and MFN2 were detected in the proband. As expected, individuals with a defined MFN2 variant, p.Arg468His, were asymptomatic or had a mild phenotype. The co-occurrence of such diseases, SPG18 and CMT2A, may result in the milder phenotype to be overlooked or its features considered as a part of the symptoms of other disease. Certainly, providing genetic counseling in such cases can be challenging. These cases reveal the importance of WES.
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  • 文章类型: Journal Article
    目的:由于ERLIN2基因突变导致的遗传性痉挛性截瘫(HSP)被命名为痉挛性截瘫18(SPG18)。迄今为止,SPG18家族/病例仍然很少报告。所有早期报告的病例都具有常染色体隐性(AR)遗传模式。在过去的3年里,常染色体显性遗传(AD)或散发性SPG18病例连续报道。这里,我们报道了中国第一个常染色体显性遗传SPG18家系的临床和遗传特征。
    方法:我们进行了详细的病史查询,先证者及其家人的神经系统检查,并绘制了家谱。先证者接受了脑部和颈部磁共振成像(MRI),肌电图(EMG),和整个外显子组测序。进行Sanger测序以验证先证者和一些家庭成员的遗传变异。对所有报道的SPG18家族/病例进行了文献回顾,以总结不同遗传模式下SPG18的临床遗传特征。
    结果:4例患者在常染色体显性遗传模型中连续三代被临床诊断为慢性痉挛性截瘫。所有患者均表现为青少年-青少年发作,并逐渐恶化纯HSP表型。临床表型在家庭中是一致的。先证者中的全外显子组测序鉴定出先前报道的杂合c.502G>A(p。ERLIN2基因第8外显子V168M)突变。该突变与家族中的表型共分离,并且根据美国医学遗传学和基因组学学院(ACMG)指南被分类为可能的致病性。迄今为止,八个AR-SPG18家族,五个AD-SPG18家族,报告了三例零星病例。AD-SPG18的临床表型为青少年-青少年发病纯HSP,而AR-SPG18的表型大多是复杂的HSP,发病更早,病情更严重。在极少数情况下,最初的痉挛性截瘫可能演变成快速进行性肌萎缩侧索硬化(ALS).
    结论:我们报道了中国汉族人群中第一个常染色体显性遗传SPG18谱系,这为V168M突变增加了更多的致病证据。随着更多SPG18病例的报道,SPG18的要点在临床实践中需要更新.在ERLIN2杂合突变缺失的情况下,上运动神经元疾病的基因检测应给予特别注意。
    OBJECTIVE: Hereditary spastic paraplegia (HSP) due to ERLIN2 gene mutations was designated as spastic paraplegia 18 (SPG18). To date, SPG18 families/cases are still rarely reported. All early reported cases shared the autosomal recessive (AR) inheritance pattern. Over the past 3 years, autosomal dominant (AD) or sporadic SPG18 cases had been continuously reported. Here, we reported the clinical and genetic features of the first autosomal dominant SPG18 pedigree in Chinese.
    METHODS: We conducted detailed medical history inquiry, neurological examinations of the proband and his family members, and charted the family tree. The proband underwent brain and cervical magnetic resonance imaging (MRI), electromyography (EMG), and whole exome sequencing. Sanger sequencing was performed to verify the genetic variation in the proband and some family members. A literature review of all reported SPG18 families/cases was carried out to summarize the clinical-genetic characteristics of SPG18 under different inheritance patterns.
    RESULTS: Four patients were clinically diagnosed as chronic spastic paraplegia in three consecutive generations with the autosomal dominant inheritance model. All the patients presented juvenile-adolescent onset and gradually worsening pure HSP phenotype. Clinical phenotypes were consistent within the family. Whole exome sequencing in the proband identified a previously reported heterozygous c.502G > A (p.V168M) mutation in exon 8 of ERLIN2 gene. This mutation was cosegregated with the phenotype in the family and was classified as likely pathogenic according to American College of Medical Genetics and Genomics (ACMG) guidelines. To date, eight AR-SPG18 families, five AD-SPG18 families, and three sporadic cases had been reported. Clinical phenotype of AD-SPG18 was juvenile-adolescent onset pure HSP, while the phenotype of AR-SPG18 was mostly complicated HSP with earlier onset and more severe conditions. In rare cases, the initial spastic paraplegia could evolve to rapidly progressive amyotrophic lateral sclerosis (ALS).
    CONCLUSIONS: We reported the first autosomal dominant SPG18 pedigree in Chinese Han population, which added more pathogenic evidence for V168M mutation. As more SPG18 cases reported, the essentials of SPG18 need to be updated in clinical practice. Special attentions should be given in gene test for upper motor neuron disorders in case of missing heterozygous mutations in ERLIN2.
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  • 文章类型: Journal Article
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  • 文章类型: Journal Article
    Endoplasmic reticulum lipid raft-associated protein 2 (ERLIN2) is protein contained in the membrane of the endoplasmic reticulum. In lung adenocarcinoma (LUAD), the molecular function of ERLIN2 and the correlation between ERLIN2 and tumor-infiltrating immune cells have been unclear. The aim of our study was to determine the role of ERLIN2 in LUAD development to provide a better understanding of the molecular pathogenesis of this disease and identify new therapeutic targets for its treatment.
    Immunohistochemistry, Western blotting, and real-time quantitative polymerase chain reaction were used to detect protein and mRNA levels of ERLIN2 in LUAD and adjacent normal tissues. Using the A549, H1299 cell line, ERLIN2-short hairpin RNA was applied to silence ERLIN2 to determine its role in LUAD cell proliferation and invasion. Based on mRNA expression of ERLIN2 from the Cancer Genome Atlas (TCGA) database, we identified ERLIN2-related protein-coding genes and analyzed the Kyoto Encyclopedia of Genes and Genomes pathway to explore its potential biological functions and determined the correlation between ERLIN2 and tumor-infiltrating immune cells.
    ERLIN2 was abnormally expressed in a variety of tumor tissues and is highly expressed in LUAD. This overexpression was associated with histological grade (P = 0.044), TNM stage (P = 0.01), and lymph node metastasis (P = 0.038). Patient overall survival was poorer with ERLIN2 overexpression. Downregulation of ERLIN2 inhibited LUAD cell proliferation and invasion in vitro. Based on mRNA expression of ERLIN2 from the TCGA database, 13 ERLIN2-related genes and 10 pathways were identified and showed a correlation between ERLIN2 and naive B cells and neutrophils.
    ERLIN2 could serve as a potential diagnostic and prognostic biomarker for LUAD and has demonstrated to be correlated with immune infiltrates, which suggests that it may represent a new therapeutic target for LUAD.
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  • 文章类型: Journal Article
    拷贝数改变在癌症基因组中广泛存在,并且是肿瘤性疾病发病机理的基因组不稳定性的一部分。特定染色体基因座的重复拷贝数改变可能导致癌基因的增加或肿瘤抑制基因的丢失,并在某些类型癌症的基因组框架中根深蒂固。染色体8p11.23的基因座表现出在鳞状肺癌中最常见的复发性扩增,乳腺癌,食管鳞癌,和尿路上皮癌.扩增在其他癌症中很少见。扩增的片段涉及几种描述的癌基因,这些癌基因可能促进癌细胞的存活和增殖。以及特征较差的基因,这些基因也可能有助于肿瘤的形成过程。在8p11.23扩增中被提议为“驱动因素”的基因包括ZNF703、FGFR1和PLPP5。在肿瘤网络中可能在功能上重要的基因座中的其他基因包括共伴侣BAG4,赖氨酸甲基转移酶NSD3,ASH2L,另一个甲基转移酶复合体的成员,MLL和mRNA加工和翻译调节因子LSM1和EIF4EBP1。在本文中,将检查位于8p11.23的扩增片段中的基因在癌症中的作用,并将提供有关其对癌症的重要性的数据。
    Copy number alterations are widespread in cancer genomes and are part of the genomic instability underlying the pathogenesis of neoplastic diseases. Recurrent copy number alterations of specific chromosomal loci may result in gains of oncogenes or losses of tumor suppressor genes and become entrenched in the genomic framework of certain types of cancers. The locus at chromosome 8p11.23 presents recurrent amplifications most commonly in squamous lung carcinomas, breast cancers, squamous esophageal carcinomas, and urothelial carcinomas. Amplification is rare in other cancers. The amplified segment involves several described oncogenes that may promote cancer cell survival and proliferation, as well as less well characterized genes that could also contribute to neoplastic processes. Genes proposed to be \"drivers\" in 8p11.23 amplifications include ZNF703, FGFR1 and PLPP5. Additional genes in the locus that could be functionally important in neoplastic networks include co-chaperone BAG4, lysine methyltransferase NSD3, ASH2L, a member of another methyltransferase complex, MLL and the mRNA processing and translation regulators LSM1 and EIF4EBP1. In this paper, genes located in the amplified segment of 8p11.23 will be examined for their role in cancer and data arguing for their importance for cancers with the amplification will be presented.
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  • 文章类型: Journal Article
    背景:星形细胞瘤是原发性中枢神经系统常见的肿瘤类型,在世界范围内死亡率很高。长非编码RNA(lncRNA)的异常表达已通过新兴研究引入,导致多种癌症的发展。
    方法:RT-qPCR检测了SNHG17、miR-876-5p和ERLIN2的表达,蛋白质印迹评估了ERLIN2蛋白水平。RNA下拉和荧光素酶报告基因测定说明了SNHG17与其下游分子之间的关系。
    结果:SNHG17在星形细胞瘤细胞中上调。此外,SNHG17的沉默可以抑制扩散,星形细胞瘤细胞的迁移和侵袭。此外,miR-876-5p是星形细胞瘤中SNHG17的下游分子。ERLIN2被确定为被miR-876-5p靶向。miR-876-5p过表达和SNHG17沉默可降低ERLIN2mRNA和蛋白水平。此外,miR-876-5p过表达减缓了星形细胞瘤细胞的生物学过程,ERLIN2击倒也是如此。更重要的是,SNHG17下调对星形细胞瘤细胞恶性行为的影响被过表达的ERLIN2抵消或抑制miR-876-5p。
    结论:SNHG17可以通过增强miR-876-5p以提高ERLIN2的表达来诱导星形细胞瘤的进展。这项研究表明SNHG17具有很高的潜力成为星形细胞瘤的治疗靶标。
    BACKGROUND: Astrocytoma is a common tumor type in primary central nervous system and has a high death rate around the world. Aberrant expression of long non-coding RNAs (lncRNAs) has been introduced by emerging studies to result in the development of diverse cancers.
    METHODS: RT-qPCR examined the expression of SNHG17, miR-876-5p and ERLIN2, and western blot evaluated ERLIN2 protein level. RNA pull down and luciferase reporter assays illustrated the relationships between SNHG17 and its downstream molecules.
    RESULTS: SNHG17 was up-regulated in astrocytoma cells. Moreover, SNHG17 silence could repress the proliferation, migration and invasion of astrocytoma cells. Besides, miR-876-5p was selected out as a downstream molecule of SNHG17 in astrocytoma. ERLIN2 was determined to be targeted by miR-876-5p. ERLIN2 mRNA and protein levels were lessened by miR-876-5p overexpression and SNHG17 silence. Additionally, miR-876-5p overexpression decelerated the biological processes of astrocytoma cells, so did ERLIN2 knockdown. More importantly, the impacts of SNHG17 down-regulation on the malignant behaviors of astrocytoma cells were counteracted by overexpressed ERLIN2 or inhibited miR-876-5p.
    CONCLUSIONS: SNHG17 could induce the progression of astrocytoma by sponging miR-876-5p to elevate the expression of ERLIN2. This study indicated that SNHG17 has a high potential to be a therapeutic target for astrocytoma.
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  • 文章类型: Journal Article
    The erlin1/2 complex is a ∼2-MDa endoplasmic reticulum membrane-located ensemble of the ∼40-kDa type II membrane proteins erlin1 and erlin2. The best defined function of this complex is to mediate the ubiquitination of activated inositol 1,4,5-trisphosphate receptors (IP3Rs) and their subsequent degradation. However, it remains unclear how mutations of the erlin1/2 complex affect its cellular function and cause cellular dysfunction and diseases such as hereditary spastic paraplegia. Here, we used gene editing to ablate erlin1 or erlin2 expression to better define their individual roles in the cell and examined the functional effects of a spastic paraplegia-linked mutation to erlin2 (threonine to isoleucine at position 65; T65I). Our results revealed that erlin2 is the dominant player in mediating the interaction between the erlin1/2 complex and IP3Rs and that the T65I mutation dramatically inhibits this interaction and the ability of the erlin1/2 complex to promote IP3R ubiquitination and degradation. Remarkably, we also discovered that the erlin1/2 complex specifically binds to phosphatidylinositol 3-phosphate, that erlin2 binds this phospholipid much more strongly than does erlin1, that the binding is inhibited by T65I mutation of erlin2, and that multiple determinants within the erlin2 polypeptide comprise the phosphatidylinositol 3-phosphate-binding site. Overall, these results indicate that erlin2 is the primary mediator of the cellular roles of the erlin1/2 complex and that disease-linked mutations of erlin2 can affect both IP3R processing and lipid binding.
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  • 文章类型: Journal Article
    OBJECTIVE: Endoplasmic reticulum lipid raft-associated 2 (ERLIN2) is reported to be overexpressed in human breast cancer cells and plays an important role in cell proliferation. MicroRNAs (miRNAs) act as post-transcriptional regulators of gene expression and are involved in the development of multiple malignancies, including breast cancer. However, the molecular mechanism of the aberrant ERLIN2 expression in human breast cancer remains poorly understood.
    METHODS: MiR-410 expression level was analyzed using Real-time PCR, and ERLIN2 expression was analyzed using Western blot, Real-time PCR and immunohistochemical staining. The effect of miR-410 on ERLIN2 3\'UTR intensity was performed using a luciferase assay. Cell proliferation was analyzed using CCK-8 and colony formation assay, together with an Annexin V-PE/7-AAD kit for cell apoptosis assay. Cell migration and invasion was detected using a Transwell migration and invasion assay. Methylation specific PCR was used to examine whether miR-410 promoter was demethylated.
    RESULTS: In this study, we validated that ERLIN2 was a direct target of miR-410 and miR-410 suppressed ERLIN2 expression at the post-transcriptional level. Importantly, the regulation of ERLIN2 by miR-410 was estrogen receptor (ER) dependent. Functional studies demonstrated that miR-410 inhibited breast cancer cell proliferation, migration and invasion, but promoted cell apoptosis. However, inhibition of miR-410 resulted in opposite effects. A xenograft nude mouse model further confirmed that miR-410 suppressed breast tumor growth. In addition, miR-410 modulated the expression levels of epithelial-mesenchymal transition (EMT)-related genes. ERLIN2 knockdown suppressed cell proliferation, migration and invasion, as well as EMT. ERLIN2 overexpression can restore the cell proliferation, migration and invasion that were inhibited by miR-410. Furthermore, our data demonstrated that miR-410 inhibition suppressed the expression of endoplasmic reticulum-stress (ERS)-related genes, while ERLIN2 knockdown abrogated the effects of miR-410 inhibitor. Finally, we showed that miR-410 was downregulated in human ER-positive breast cancer tissues, inversely correlated with ERLIN2. We further demonstrated the downregulation of miR-410 in breast cancer might be due to the hypermethylation of its promoter.
    CONCLUSIONS: Our study indicates that miR-410 suppresses cell growth, migration and invasion by directly downregulating ERLIN2 in ER positive breast cancer, acting as a tumor suppressor. Our study also suggests that miR-410 may serve as a potential therapeutic target for patients with ER positive breast cancer.
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