Dynamic MRI

动态 MRI
  • 文章类型: Journal Article
    从不完整的k空间数据重建动态磁共振图像由于其减少扫描时间的潜力而引起了重大的研究兴趣。然而,传统的迭代优化算法无法在较高的加速因子下忠实地重建图像,并且重建时间长。此外,基于端到端深度学习的重建算法存在模型参数大、重建结果缺乏鲁棒性等问题。最近,展开的深度学习模型,在算法稳定性和适用性灵活性方面显示出巨大的潜力。在本文中,我们提出了一个基于二阶半二次分裂(HQS)算法的展开深度学习网络,其中,该框架的前向传播过程严格遵循HQS算法的计算流程。特别是,我们提出了一个退化感知模块,通过将随机采样模式与中间变量相关联来指导迭代过程。我们引入了信息融合转换器(IFT)来从图像序列中提取局部和非局部先验信息,从而消除随机欠采样产生的混叠伪影。最后,我们在HQS算法中施加低秩约束以进一步增强重建结果。实验表明,我们提出的模型的每个组件模块有助于改善重建任务。我们提出的方法与最先进的方法相比,具有令人满意的性能,并且在不同的采样掩码中具有出色的泛化能力。在低加速因子下,PSNR提高了0.7%。此外,当加速因子达到8和12时,PSNR分别提高了3.4%和5.8%。
    The reconstruction of dynamic magnetic resonance images from incomplete k-space data has sparked significant research interest due to its potential to reduce scan time. However, traditional iterative optimization algorithms fail to faithfully reconstruct images at higher acceleration factors and incur long reconstruction time. Furthermore, end-to-end deep learning-based reconstruction algorithms suffer from large model parameters and lack robustness in the reconstruction results. Recently, unrolled deep learning models, have shown immense potential in algorithm stability and applicability flexibility. In this paper, we propose an unrolled deep learning network based on a second-order Half-Quadratic Splitting(HQS) algorithm, where the forward propagation process of this framework strictly follows the computational flow of the HQS algorithm. In particular, we propose a degradation-sense module by associating random sampling patterns with intermediate variables to guide the iterative process. We introduce the Information Fusion Transformer(IFT) to extract both local and non-local prior information from image sequences, thereby removing aliasing artifacts resulting from random undersampling. Finally, we impose low-rank constraints within the HQS algorithm to further enhance the reconstruction results. The experiments demonstrate that each component module of our proposed model contributes to the improvement of the reconstruction task. Our proposed method achieves comparably satisfying performance to the state-of-the-art methods and it exhibits excellent generalization capabilities across different sampling masks. At the low acceleration factor, there is a 0.7% enhancement in the PSNR. Furthermore, when the acceleration factor reached 8 and 12, the PSNR achieves an improvement of 3.4% and 5.8% respectively.
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  • 文章类型: Journal Article
    目的:本研究使用动态磁共振成像(MRI)比较了脊髓型颈椎病(CSM)患者颈脊髓的形态变化,并评估了其与运动学变化的相关性。帘线横截面积(CSA),在T2加权成像(T2WI)上具有高信号强度(SI)。
    方法:通过动态MRI评估CSM患者颈髓矢状和轴向CSA变化,脑脊液(CSF)储备率,绳索撞击程度,帘线压缩率,运动范围(ROM),和T2WI上SI的严重程度。使用Muhle分级系统评估帘线撞击的程度。使用日本骨科协会评分和Nurick等级评估临床结果。
    结果:该研究包括191名患者(113名男性),平均年龄55.34±12.09岁。延伸过程中,矢状CSF储备率和脐带占用率最低。脊髓撞击和SI改变在延伸定位的MRI中更为普遍。动态X线照片上的ROM和动态MRI之间没有差异。SI高度变化的患者术前宫颈ROM更大。
    结论:动态MRI可用于评估颈部运动。高SI患者术前ROM较高,但术后预后较差。与屈曲相比,颈部伸展加剧了宫颈狭窄和脊髓压迫,颈椎运动与CSM的严重程度有关。颈椎运动应仔细评估,特别是过度伸展,防止CSM恶化。
    The study compared the morphometric changes of the cervical spinal cord using dynamic magnetic resonance imaging (MRI) in patients with cervical spondylotic myelopathy (CSM) and assessed the correlation with kinematic changes, cord cross-sectional area (CSA), and high signal intensity (SI) on T2-weighted imaging (T2WI).
    Patients with CSM were evaluated through dynamic MRI for sagittal and axial CSA changes of the cervical cord, cerebrospinal fluid (CSF) reserve ratio, degree of cord impingement, cord compression rate, range of motion (ROM), and severity of SI on T2WI. The degree of cord impingement was evaluated using the Muhle grading system. Clinical outcomes were assessed using Japanese Orthopaedic Association scoring and Nurick grade.
    The study included 191 patients (113 males) with a mean age of 55.34 ± 12.09 years. The lowest sagittal CSF reserve ratio and cord occupation rate were observed during extension. Cord impingement and SI change were more prevalent in extension-positioned MRI. There was no difference between ROM on dynamic radiographs and dynamic MRI. Preoperative cervical ROM was greater in patients with intensely high SI change.
    Dynamic MRI is useful for evaluating neck movement. Patients with high SI had greater ROM before surgery but worse outcomes after. Neck extension exacerbated cervical stenosis and cord compression compared to flexion, and cervical spinal motion contributed to the severity of CSM. Cervical spinal motion should be carefully evaluated, particularly in hyperextension, to prevent worsening of CSM.
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  • 文章类型: Journal Article
    开发和评估深度学习(DL)管道,以从公开可用的自然视频(Inter4K)中学习动态MR图像重建。对一系列DL架构进行了学习(VarNet,3DUNet,FastDVDNet)和相应的采样模式(笛卡尔,径向,螺旋)来自真实的多线圈心脏MR数据(N=692)或从Inter4K自然视频(N=588)模拟的合成MR数据。使用用心脏数据和自然视频训练的DL网络重建实时欠采样动态MR图像,和压缩感知(CS)。在模拟(N=104个数据集)中评估了MSE的差异,PSNR,和SSIM,以及心脏电影的前瞻性(短轴,四个房间,N=20)和语音电影(N=10)数据在主观图像质量排名方面,SNR和边缘锐度。使用事后Nemenyi分析进行弗里德曼卡方检验以评估统计学意义。在模拟数据中,用心脏数据训练的DL网络优于用自然视频训练的DL网络,两者均优于CS(p<0.05)。然而,在前瞻性实验中,使用两种训练数据集的DL重建进行了类似的排名(并且高于CS),并且在大多数条件下在SNR和边缘锐度方面没有统计学差异。开发的管道能够从自然视频中学习动态MR重建,保留了DL重建优势,例如高质量的快速和超快重建,同时克服了一些限制(数据稀缺或共享)。自然视频数据集,代码和预先训练的网络在github上很容易获得。
    To develop and assess a deep learning (DL) pipeline to learn dynamic MR image reconstruction from publicly available natural videos (Inter4K). Learning was performed for a range of DL architectures (VarNet, 3D UNet, FastDVDNet) and corresponding sampling patterns (Cartesian, radial, spiral) either from true multi-coil cardiac MR data (N = 692) or from synthetic MR data simulated from Inter4K natural videos (N = 588). Real-time undersampled dynamic MR images were reconstructed using DL networks trained with cardiac data and natural videos, and compressed sensing (CS). Differences were assessed in simulations (N = 104 datasets) in terms of MSE, PSNR, and SSIM and prospectively for cardiac cine (short axis, four chambers, N = 20) and speech cine (N = 10) data in terms of subjective image quality ranking, SNR and Edge sharpness. Friedman Chi Square tests with post-hoc Nemenyi analysis were performed to assess statistical significance. In simulated data, DL networks trained with cardiac data outperformed DL networks trained with natural videos, both of which outperformed CS (p < 0.05). However, in prospective experiments DL reconstructions using both training datasets were ranked similarly (and higher than CS) and presented no statistical differences in SNR and Edge Sharpness for most conditions.The developed pipeline enabled learning dynamic MR reconstruction from natural videos preserving DL reconstruction advantages such as high quality fast and ultra-fast reconstructions while overcoming some limitations (data scarcity or sharing). The natural video dataset, code and pre-trained networks are made readily available on github.
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  • 文章类型: Journal Article
    低尿路症状(LUTS)影响了大多数老年人。3D动态MRI显示出有望作为一种非侵入性诊断工具,可以评估膀胱解剖结构和功能(尿动力学),同时克服与当前尿动力学评估方法相关的挑战。然而,这项技术的验证仍然是一个未满足的需求。在这项研究中,解剖学上的现实,我们创建了膀胱模拟体外血流模型,并使用高度可控的注射泵对3D动态MRI性能进行系统基准测试.在模拟充盈和排尿事件期间获得合成膀胱模型的时间分辨体积,并用于计算体积流速。在MRI采集期间,记录每个事件期间的压力,并用于创建PV回路以进行工作评估。排尿和充盈事件的对照和MRI衍生体积之间的误差表现出3.36%和4.66%的差异,分别。与对照流速相比,MRI得出的流速的平均误差略有增加(排尿和填充为4.90%和7.67%,分别)。总的来说,分段体积的平均误差随体积流量的减小而增加。在排空期间观察到压降。填充过程中压力增加。通过使用高分辨率PIV对膀胱模型内的速度进行可视化和量化,可以增强对新型3DMRI尿动力学的验证。这在3D动态MRI中是不可能的。
    Lowery urinary tract symptoms (LUTS) affect a large majority of the aging population. 3D Dynamic MRI shows promise as a noninvasive diagnostic tool that can assess bladder anatomy and function (urodynamics) while overcoming challenges associated with current urodynamic assessment methods. However, validation of this technique remains an unmet need. In this study, an anatomically realistic, bladder-mimicking in vitro flow model was created and used to systematically benchmark 3D dynamic MRI performance using a highly controllable syringe pump. Time-resolved volumes of the synthetic bladder model were obtained during simulated filling and voiding events and used to calculate volumetric flowrate. During MRI acquisitions, pressure during each event was recorded and used to create PV loops for work assessment. Error between control and MRI-derived volume for voiding and filling events exhibited 3.36% and 4.66% differences, respectively. A slight increase in average error was observed for MRI-derived flowrate when compared to the control flowrate (4.90% and 7.67% for voiding and filling, respectively). Overall, average error in segmented volumes increased with decreasing volume flowrate. Pressure drops were observed during voiding. Pressure increased during filling. Enhanced validation of novel 3D MRI urodynamics is achieved by using high-resolution PIV for visualizing and quantifying velocity inside the bladder model, which is not currently possible with 3D Dynamic MRI.
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  • 文章类型: Journal Article
    背景:盆底功能障碍(PFD)经常在男女中报告。动态磁共振排粪造影(DMRD)是首选模式,主要是由于其在临床检查中的优越性和补充作用。然而,从印度患者的角度进行的研究很少,而且大多局限于女性。因此,我们评估了DMRD在PFD患者中的诊断表现,并将结果与临床检查结果相关联.
    方法:这种前瞻性,观察性研究包括57名男女成人患者,表现为盆底症状(PFS)并诊断为PFD。最初,患者接受了临床检查,并记录诊断。随后,患者接受了DMRD。研究结果与Pearson“r”相关系数相关。
    结果:受累于多个隔室的患者比例明显更高(36vs.12,p<0.001),膀胱膨出(23vs.8,p=0.002),和直肠脱垂(25vs.14,p=0.030)在DMRD上比临床检查,而子宫脱垂没有显着差异(p=0.789)。膀胱膨出和直肠脱垂的分级以及肠膨出/腹膜膨出的诊断,直肠膨出,肠套叠只能用DMRD进行。DMRD与膀胱膨出的临床检查有很强的显著相关性(r=0.943,p=0.003),子宫脱垂(r=0.972,p=0.001),直肠脱垂(r=0.951,p=0.001)。
    结论:DMRD在多室受累的诊断中表现明显更好,膀胱膨出,直肠脱垂.关于膀胱膨出的诊断,DMRD和临床检查显着相关。子宫脱垂,直肠脱垂.因此,DMRD提供信息,除了临床检查,应用于有症状的患者。
    BACKGROUND: Pelvic floor dysfunction (PFD) is frequently reported in both sexes. Dynamic magnetic resonance defecography (DMRD) is the preferred modality, mainly due to its superiority and complementary role in clinical examination. However, studies from the perspective of Indian patients are scarce and mostly restricted to females. Thus, we assessed the diagnostic performance of DMRD in patients with PFD and correlated the findings with those on clinical examination.
    METHODS: This prospective, observational study involved 57 adult patients of either sex, presenting with pelvic floor symptoms (PFS) and diagnosed with PFD. Initially, the patients underwent clinical examination, and diagnosis was recorded. Subsequently, the patients were subjected to DMRD. The findings were correlated with the Pearson \"r\" correlation coefficient.
    RESULTS: A significantly greater proportion of patients had involvement of multiple compartments (36 vs. 12, p<0.001), cystocele (23 vs. 8, p=0.002), and rectal prolapse (25 vs. 14, p=0.030) on DMRD than clinical examination, while there was no significant difference regarding uterine prolapse (p=0.789). Grading of cystocele and rectal prolapse as well as diagnosis of enterocele/peritoneocele, rectocele, and intussusception could be done only with DMRD. DMRD had a strong and significant correlation with clinical examination regarding cystocele (r=0.943, p=0.003), uterine prolapse (r=0.972, p=0.001), and rectal prolapse (r=0.951, p=0.001).
    CONCLUSIONS: DMRD demonstrated significantly better performance in the diagnosis of multiple compartment involvement, cystocele, and rectal prolapse. DMRD and clinical examination were significantly correlated regarding the diagnosis of cystocele, uterine prolapse, and rectal prolapse. Thus, DMRD provides information, in addition to the clinical examination, and should be used in symptomatic patients.
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  • 文章类型: Journal Article
    动态对比增强(DCE)心脏磁共振成像(CMRI)是一种广泛用于诊断心肌血流(灌注)异常的方式。在典型的自由呼吸DCE-CMRI扫描中,在不同的对比“冲洗/冲洗”阶段获得了近300张时间分辨的心肌灌注图像。在DCE图像系列的每个时间帧中对心肌轮廓进行手动分割可能既繁琐又耗时,特别是当非刚性运动校正失败或不可用时。虽然深度神经网络(DNN)已经显示出分析DCE-CMRI数据集的前景,缺乏用于可靠检测失败分割的“动态质量控制”(dQC)技术。在这里,我们提出了一种新的时空不确定性度量作为dQC工具,用于基于DNN的自由呼吸DCE-CMRI数据集的分割,通过在外部数据集上验证所提出的度量并建立人在环框架来改善分割结果。在拟议的方法中,我们将我们的dQC工具检测到的最不确定的前10%的分段转介给人类专家进行细化。该方法导致Dice评分的显着增加(p<0.001),并且分割失败的图像数量显着减少(16.2%至11.3%),而随机选择相同数量的分割用于人类转诊的替代方法没有实现任何显着改善。我们的结果表明,所提出的dQC框架有可能准确识别质量较差的分割,并可能在人在环管道中对DCE-CMRI进行有效的基于DNN的分析,以用于动态CMRI数据集的临床解释和报告。
    Dynamic contrast-enhanced (DCE) cardiac magnetic resonance imaging (CMRI) is a widely used modality for diagnosing myocardial blood flow (perfusion) abnormalities. During a typical free-breathing DCE-CMRI scan, close to 300 time-resolved images of myocardial perfusion are acquired at various contrast \"wash in/out\" phases. Manual segmentation of myocardial contours in each time-frame of a DCE image series can be tedious and time-consuming, particularly when non-rigid motion correction has failed or is unavailable. While deep neural networks (DNNs) have shown promise for analyzing DCE-CMRI datasets, a \"dynamic quality control\" (dQC) technique for reliably detecting failed segmentations is lacking. Here we propose a new space-time uncertainty metric as a dQC tool for DNN-based segmentation of free-breathing DCE-CMRI datasets by validating the proposed metric on an external dataset and establishing a human-in-the-loop framework to improve the segmentation results. In the proposed approach, we referred the top 10% most uncertain segmentations as detected by our dQC tool to the human expert for refinement. This approach resulted in a significant increase in the Dice score (p < 0.001) and a notable decrease in the number of images with failed segmentation (16.2% to 11.3%) whereas the alternative approach of randomly selecting the same number of segmentations for human referral did not achieve any significant improvement. Our results suggest that the proposed dQC framework has the potential to accurately identify poor-quality segmentations and may enable efficient DNN-based analysis of DCE-CMRI in a human-in-the-loop pipeline for clinical interpretation and reporting of dynamic CMRI datasets.
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  • 文章类型: Case Reports
    颈椎管具有广泛的运动范围和特定的生物力学,涉及可能引起动态脊髓压迫的不同病理。这项研究引入了新的协议,用于获取颈椎MRI的扩展视图,以评估动态颈椎管受损。我们认为,在决定治疗有挑战性的患者的最佳方法时,包括俯卧位扩展视图的动态MRI可能是一个实用的选择。
    The cervical spinal canal has a wide range of motion and specific biomechanics involved with different pathologies that may cause dynamic cord compressions. This study has introduced new protocol for acquiring an extension view of cervical MRI to assess dynamic cervical spinal canal compromise. We posit that dynamic MRI comprising extension view in prone position could be a practical option when deciding the best approach in treating challenging patients.
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  • 文章类型: Journal Article
    由于MRI表现和症状之间的差异,诊断间歇性臂神经根病的颈椎间孔狭窄具有挑战性。这可以归因于MRI图像通常在放松的仰卧位中获得的事实。本研究旨在评估动态MRI压缩系统(DMRICS)的可行性,并评估宫颈孔的可能变化,具有定量测量和定性分级系统,在模拟喷涌测试期间使用MRI。十名患者(五名女性和五名男性,29-45岁)先前已确认的颈椎椎间孔狭窄患者使用DMRICS进行了MRI扫描。在放松和激发状态下都获得了MRI图像。放射科医生在两个患者位置的症状侧评估了30个孔(C4-C7)。进行了定量和定性测量,包括数字评分量表(NRS)和Park和Kim评分系统。在10例患者中,有9例引起了颈部和手臂的一致疼痛。注意到Park和Kim孔道等级的显着变化:挑衅后,27个Park等级中的13个等级和27个Kim等级中的9个等级升级。没有观察到定量变化。这项初步研究表明,DMRICS设备有可能提高神经根型颈椎病的诊断准确性,在进行MRI时,在模拟Spurling测试中显示出诱发的宫颈椎间孔变化。
    Diagnosing cervical foraminal stenosis with intermittent arm radiculopathy is challenging due to discrepancies between MRI findings and symptoms. This can be attributed to the fact that MRI images are often obtained in a relaxed supine position. This study aims to evaluate the feasibility of the Dynamic MRI Compression System (DMRICS) and to assess possible changes in cervical foramina, with both quantitative measurements and qualitative grading systems, with MRI during a simulated Spurling test. Ten patients (five women and five men, ages 29-45) with previously confirmed cervical foraminal stenosis underwent MRI scans using DMRICS. MRI images were acquired in both relaxed and provoked states. A radiologist assessed 30 foramina (C4-C7) on the symptomatic side in both patient positions. Quantitative and qualitative measures were performed, including the numeric rating scale (NRS) and the Park and Kim grading systems. The provoked state induced concordant neck and arm pain in 9 of 10 patients. Significant shifts in Park and Kim foraminal gradings were noted: 13 of 27 Park gradings and 9 of 27 Kim gradings escalated post provocation. No quantitative changes were observed. This pilot study indicates that the DMRICS device has the potential to improve diagnostic accuracy for cervical radiculopathy, demonstrating induced cervical foraminal changes during a simulated Spurling test while performing MRI.
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  • 文章类型: Journal Article
    MRI是语音成像的黄金标准。然而,它仍然相对缓慢,这使得快速运动的成像复杂化。因此,通常在2D中执行声带的MRI。虽然3DMRI提供了更多信息,这样的图像的质量往往是不够的。这项研究的目的是测试超分辨率算法在动态声道MRI中的适用性。总的来说,使用高度欠采样的径向2DFLASH序列连续采集25个8mm的矢状切片,面内分辨率为1.6×1.6mm2。志愿者正在阅读带有两种不同协议的法语文本。使用同时记录的声音对齐切片。超分辨率策略用于重建1.6×1.6×1.6mm3的各向同性体积。所得到的图像不如原生2D图像清晰,但表现出更高的信噪比。还表明,超分辨率允许消除导致切片之间规则过渡的不一致。此外,已经证明,使用视觉刺激和较短的文本片段可以提高切片间的一致性和超分辨图像的清晰度。因此,有了正确的演讲任务选择,所提出的方法允许在自然语音过程中重建声道的高质量动态3D体积。
    MRI is the gold standard modality for speech imaging. However, it remains relatively slow, which complicates imaging of fast movements. Thus, an MRI of the vocal tract is often performed in 2D. While 3D MRI provides more information, the quality of such images is often insufficient. The goal of this study was to test the applicability of super-resolution algorithms for dynamic vocal tract MRI. In total, 25 sagittal slices of 8 mm with an in-plane resolution of 1.6 × 1.6 mm2 were acquired consecutively using a highly-undersampled radial 2D FLASH sequence. The volunteers were reading a text in French with two different protocols. The slices were aligned using the simultaneously recorded sound. The super-resolution strategy was used to reconstruct 1.6 × 1.6 × 1.6 mm3 isotropic volumes. The resulting images were less sharp than the native 2D images but demonstrated a higher signal-to-noise ratio. It was also shown that the super-resolution allows for eliminating inconsistencies leading to regular transitions between the slices. Additionally, it was demonstrated that using visual stimuli and shorter text fragments improves the inter-slice consistency and the super-resolved image sharpness. Therefore, with a correct speech task choice, the proposed method allows for the reconstruction of high-quality dynamic 3D volumes of the vocal tract during natural speech.
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  • 文章类型: Journal Article
    目的:为4D-MRI重建开发一种新的深度学习方法,名为Movienet,它利用时空线圈相关性和运动保存,而不是k空间数据一致性,以加速金角径向数据的采集,并在动态MRI中实现亚秒重建时间。
    方法:Movienet使用U-net架构,具有完全在图像域中操作的修改的残差学习块,以去除混叠伪影并重建非混叠的运动分辨4D图像。通过对输入图像和参考进行分类以从到期到吸气的线性运动顺序进行训练来强制保持运动。以低于用于训练的参考XD-GRASP图像的扫描时间收集输入图像。Movienet在治疗性1.5TMR-Linac(1.5倍采集加速度)和诊断性3TMRI扫描仪(4D和3D的2倍和2.25倍采集加速度,分别)。专家临床读者对图像质量进行了定量和定性评估。
    结果:Movienet的重建时间为0.69s(4种运动状态)和0.75s(10种运动状态),大大低于迭代XD-GRASP和展开重建网络。Movienet实现比XD-GRASP更快的采集,具有相似的整体图像质量和改进的条纹伪影抑制。
    结论:Movienet相对于压缩传感加速数据采集,并在不到1s的时间内重建4D图像,这将使得能够在临床环境中有效实施4DMRI,用于快速抗运动3D解剖成像或运动分辨4D成像。
    OBJECTIVE: To develop a novel deep learning approach for 4D-MRI reconstruction, named Movienet, which exploits space-time-coil correlations and motion preservation instead of k-space data consistency, to accelerate the acquisition of golden-angle radial data and enable subsecond reconstruction times in dynamic MRI.
    METHODS: Movienet uses a U-net architecture with modified residual learning blocks that operate entirely in the image domain to remove aliasing artifacts and reconstruct an unaliased motion-resolved 4D image. Motion preservation is enforced by sorting the input image and reference for training in a linear motion order from expiration to inspiration. The input image was collected with a lower scan time than the reference XD-GRASP image used for training. Movienet is demonstrated for motion-resolved 4D MRI and motion-resistant 3D MRI of abdominal tumors on a therapeutic 1.5T MR-Linac (1.5-fold acquisition acceleration) and diagnostic 3T MRI scanners (2-fold and 2.25-fold acquisition acceleration for 4D and 3D, respectively). Image quality was evaluated quantitatively and qualitatively by expert clinical readers.
    RESULTS: The reconstruction time of Movienet was 0.69 s (4 motion states) and 0.75 s (10 motion states), which is substantially lower than iterative XD-GRASP and unrolled reconstruction networks. Movienet enables faster acquisition than XD-GRASP with similar overall image quality and improved suppression of streaking artifacts.
    CONCLUSIONS: Movienet accelerates data acquisition with respect to compressed sensing and reconstructs 4D images in less than 1 s, which would enable an efficient implementation of 4D MRI in a clinical setting for fast motion-resistant 3D anatomical imaging or motion-resolved 4D imaging.
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