Drug side-effect

  • 文章类型: Journal Article
    背景:抗肿瘤药物,包括阿霉素,伊达比星,和表柔比星,已发现由于氧化应激-线粒体功能障碍-铁凋亡(ORMFs)而对心脏产生不利影响,这是对蒽环类抗生素诱导的心脏毒性的贡献。为了更好地理解这种现象,本研究分析了ORMFS基因的时间分辨测量值.
    方法:使用人类3D心脏微组织细胞模型研究了三种蒽环类药物对ORMFs基因的影响。以两种剂量(治疗性和毒性)在14天内收集转录组数据。WGCNA确定了关键模块相关基因,功能富集分析研究了ssGSEA量化的生物过程,如免疫细胞浸润和血管生成。从心力衰竭患者和对照受试者收集活检。收集GSE59672和GSE2965用于验证。分子对接用于鉴定蒽环类抗生素与关键基因的相互作用。
    结果:在体内或体外筛选ORMFs基因。使用WGCNA,六个共表达的基因模块被分组,MEblue成为最重要的模块。获得了8个与蓝色模块相交的关键基因与动态响应基因:CD36,CDH5,CHI3L1,HBA2,HSD11B1,OGN,RPL8和VWF。与对照样品相比,除RPL8外,所有关键基因在体外ANT处理设置中都下调,他们的表达水平随着时间的推移而变化。根据功能分析,关键模块相关基因参与血管生成和免疫系统通路.在所有ANT处理的设置中,ssGSEA显示血管生成评分和免疫细胞活性的显著下调,包括活化的CD4T细胞,未成熟B细胞,记忆B细胞,自然杀伤细胞,1型辅助T细胞,和2型T辅助细胞。分子对接显示RPL8和CHI3L1对蒽环类药物显示出显著的结合亲和力。
    结论:本研究集中于人心脏微组织和ANT治疗患者心脏活检组织中ORMFs基因的动态特征。已经强调,在蒽环类抗生素诱导的心脏毒性的情况下,ORMF基因可能有助于免疫浸润和血管生成。对这些基因的透彻了解可能会导致疾病的诊断和治疗。
    BACKGROUND: Antineoplastic medications, including doxorubicin, idarubicin, and epirubicin, have been found to adversely affect the heart due to oxidative stress - mitochondrial dysfunction - ferroptosis (ORMFs), which act as contributing attributes to anthracycline-induced cardiotoxicity. To better understand this phenomenon, the time-resolved measurements of ORMFS genes were analyzed in this study.
    METHODS: The effect of three anthracycline drugs on ORMFs genes was studied using a human 3D cardiac microtissue cell model. Transcriptome data was collected over 14 days at two doses (therapeutic and toxic). WGCNA identified key module-related genes, and functional enrichment analysis investigated the biological processes quantified by ssGSEA, such as immune cell infiltration and angiogenesis. Biopsies were collected from heart failure patients and control subjects. GSE59672 and GSE2965 were collected for validation. Molecular docking was used to identify anthracyclines\'s interaction with key genes.
    RESULTS: The ORMFs genes were screened in vivo or in vitro. Using WGCNA, six co-expressed gene modules were grouped, with MEblue emerging as the most significant module. Eight key genes intersecting the blue module with the dynamic response genes were obtained: CD36, CDH5, CHI3L1, HBA2, HSD11B1, OGN, RPL8, and VWF. Compared with control samples, all key genes except RPL8 were down-regulated in vitro ANT treatment settings, and their expression levels varied over time. According to functional analyses, the key module-related genes were engaged in angiogenesis and the immune system pathways. In all ANT-treated settings, ssGSEA demonstrated a significant down-regulation of angiogenesis score and immune cell activity, including Activated CD4 T cell, Immature B cell, Memory B cell, Natural killer cell, Type 1 T helper cell, and Type 2 T helper cell. Molecular docking revealed that RPL8 and CHI3L1 show significant binding affinity for anthracyclines.
    CONCLUSIONS: This study focuses on the dynamic characteristics of ORMFs genes in both human cardiac microtissues and cardiac biopsies from ANT-treated patients. It has been highlighted that ORMFs genes may contribute to immune infiltration and angiogenesis in cases of anthracycline-induced cardiotoxicity. A thorough understanding of these genes could potentially lead to improved diagnosis and treatment of the disease.
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  • 文章类型: Journal Article
    Anthracyclines, including doxorubicin, idarubicin, and epirubicin, are common antitumor drugs as well as well-known cardiotoxic agents. This study analyzed the proteomics alteration in cardiac tissues caused by these 3 anthracyclines analogs. The in vitro human cardiac microtissues were exposed to drugs in 2 weeks; the proteomic data were measured at 7 time points. The heart biopsy data were collected from heart failure patients, in which some patients underwent anthracycline treatment. The anthracyclines-affected proteins were separately identified in the in vitro and in vivo dataset using the WGCNA method. These proteins engage in different cellular pathways including translation, metabolism, mitochondrial function, muscle contraction, and signaling pathways. From proteins detected in 2 datasets, a protein-protein network was established with 4 hub proteins, and 7 weighted proteins from both cardiac microtissue and human biopsies data. These 11 proteins, which involve in mitochondrial functions and the NF-κB signaling pathway, could provide insights into the anthracycline toxic mechanism. Some of them, such as HSPA5, BAG3, and SH3BGRL, are cardiac therapy targets or cardiotoxicity biomarkers. Other proteins, such as ATP5F1B and EEF1D, showed similar responses in both the in vitro and in vivo data. This suggests that the in vitro outcomes could link to clinical phenomena in proteomic analysis.
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  • 文章类型: Journal Article
    BACKGROUND: Initial clinical manifestations of NMOSD may rarely overlap with MS. Fingolimod may trigger severe attacks in patients with NMOSD previously misdiagnosed as MS. These cases are rare and their pathophysiology remains elusive.
    METHODS: We recruited all NMOSD patients treated by fingolimod in a single-center cohort of Afro-Caribbean neuro-inflammatory patients in Fort-de-France (French West Indies). Six patients were collected from the literature.
    RESULTS: Among 622 patients followed locally for MS, 101 received fingolimod and two suffered severe attacks revealing a typical NMOSD presentation. These two patients were found to have AQP4-IgG. The risk of misdiagnosed NMOSD in MS in our high-risk Afro-Caribbean patients was estimated to be 1.9% (0 to 4.7%). Among the whole cohort, relapses occurred within a month after fingolimod initiation in five patients. All attacks were severe and contrasted with previously benign attacks, suggesting a shift to a more severe disorder. An unusual finding in these patients was large brain lesions.
    CONCLUSIONS: AQP4-IgG should be obtained before initiation of fingolimod in high-risk patients, especially in those from areas of high NMOSD prevalence.
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  • 文章类型: Journal Article
    目的:大疱性类天疱疮(BP)可能是药物诱导的。本研究评估了BP与二肽基肽酶-4抑制剂(DPP4Is)之间的关系。
    方法:我们招募了2009年12月1日至2017年12月31日在Ogaki市立医院诊断为BP的患者。我们从病历中回顾性收集数据,并根据患者是否接受DPP4Is分为两组。此外,我们确定了在研究期间首次在我院接受DPP4Is治疗的患者的BP发生率.
    结果:在168例诊断为BP的患者中,133(79.1%)的抗BP180NC16a抗体呈阳性。共有32例(19.0%)患者服用了DPP4I,其中21例(65.6%)抗BP180NC16a抗体阳性;该比率低于未接受DPP4I的患者(82.3%;P=0.0360)。共有16例2型糖尿病患者未开DPP4I处方;只有1例(6.3%)抗BP180NC16a抗体呈阳性(P=0.0339)。在学习期间,9304名患者被处方DPP4Is,其中8人出现BP;6人(75.0%)患有非炎性BP,6例中有5例(83.3%)抗BP180NC16a抗体阴性。
    结论:伴DPP4I的BP患者抗BP180NC16a抗体阳性率低于不伴DPP4I的患者,无论2型糖尿病。在总体和2型糖尿病人群中,抗体滴度均较低。在接受DPP4Is的9304例患者中,BP的患病率为0.0859%,高于普通人群。由于DPP4Is是常见的糖尿病治疗方法,我们必须意识到英国石油公司的风险。
    OBJECTIVE: Bullous pemphigoid (BP) might be drug-induced. The present study evaluated the relationship between BP and dipeptidyl peptidase-4 inhibitors (DPP4Is).
    METHODS: We recruited patients diagnosed with BP at Ogaki Municipal Hospital from 1 December 2009 through 31 December 2017. We retrospectively collected data from medical records and divided patients into two groups based on whether they received DPP4Is. Additionally, we determined the incidence of BP in patients who were first prescribed DPP4Is at our hospital during the study period.
    RESULTS: Of 168 patients diagnosed with BP, 133 (79.1%) were positive for anti-BP180NC16a antibody. A total of 32 (19.0%) patients had been prescribed a DPP4I, 21 of whom (65.6%) were positive for anti-BP180NC16a antibody; this rate was lower than that in patients not receiving a DPP4I (82.3%; P = 0.0360). A total of 16 patients with type 2 diabetes mellitus had not been prescribed a DPP4I; only one (6.3%) was positive for anti-BP180NC16a antibody (P = 0.0339). During the study period, 9,304 patients were prescribed DPP4Is, eight of whom developed BP; six (75.0%) had non-inflammatory BP, and five of the six (83.3%) were negative for anti-BP180NC16a antibody.
    CONCLUSIONS: The positive rate of anti-BP180NC16a antibody was lower in BP patients with DPP4I than without DPP4I, regardless of type 2 diabetes mellitus. The antibody titer was low in both the overall and type 2 diabetes mellitus populations. The prevalence of BP in 9,304 patients receiving DPP4Is was 0.0859%, which is higher than that in the general population. As DPP4Is are common diabetes treatments, we must be aware of the risk of BP.
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  • 文章类型: Comparative Study
    在全球无关的蛋白质中检测相似的配体结合位点在现代药物发现中具有广泛的应用。包括药物再利用,副作用的预测,和药物-靶标相互作用。尽管已经开发了许多比较装订袋的技术,这个问题仍然构成重大挑战。
    我们评估了三种算法的性能,以计算配体结合位点之间的相似性,APoc,SiteEngine,G-LoSA.我们的评估不仅考虑了识别相似口袋和构建准确局部对齐的能力,以及这些比对序列顺序的依赖性。我们指出了以前编译的数据集的某些缺点,例如包含结构相似的蛋白质,导致高估的业绩。为了解决这些问题,严格的程序来准备无偏见,提出了高质量的基准设置。Further,我们采用AutoDockVina和rDock基于结构的虚拟筛查,对直接将结合袋与间接策略对齐的技术进行了比较评估.
    全面的基准测试显示,G-LoSA提供了相当稳健的整体性能,而APoc和SiteEngine的准确性仅在简单的数据集上令人满意。此外,将各种算法结合到元预测因子中,将现有方法检测无关蛋白质中相似结合位点的性能提高了5-10%。本文报告的所有数据均可在https://osf.io/6ngbs/上免费获得。
    Detecting similar ligand-binding sites in globally unrelated proteins has a wide range of applications in modern drug discovery, including drug repurposing, the prediction of side effects, and drug-target interactions. Although a number of techniques to compare binding pockets have been developed, this problem still poses significant challenges.
    We evaluate the performance of three algorithms to calculate similarities between ligand-binding sites, APoc, SiteEngine, and G-LoSA. Our assessment considers not only the capabilities to identify similar pockets and to construct accurate local alignments, but also the dependence of these alignments on the sequence order. We point out certain drawbacks of previously compiled datasets, such as the inclusion of structurally similar proteins, leading to an overestimated performance. To address these issues, a rigorous procedure to prepare unbiased, high-quality benchmarking sets is proposed. Further, we conduct a comparative assessment of techniques directly aligning binding pockets to indirect strategies employing structure-based virtual screening with AutoDock Vina and rDock.
    Thorough benchmarks reveal that G-LoSA offers a fairly robust overall performance, whereas the accuracy of APoc and SiteEngine is satisfactory only against easy datasets. Moreover, combining various algorithms into a meta-predictor improves the performance of existing methods to detect similar binding sites in unrelated proteins by 5-10%. All data reported in this paper are freely available at https://osf.io/6ngbs/ .
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  • 文章类型: Letter
    暂无摘要。
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  • 文章类型: Case Reports
    Transient lesions of the splenium of the corpus callosum are characterized by MRI findings. The lesions are very rare, but significant from a clinical standpoint as differential diagnoses include serious conditions such as encephalitis, meningitis, and neuroleptic malignant syndrome. In addition, it is reported that some are attributed to the withdrawal of antiepileptic drugs. Here, we present a case of transient lesions of the splenium of the corpus callosum following rapid withdrawal of levetiracetam alone. To the best of our knowledge, this is the first report of such a case. Moreover, it is reported that cases of incidental transient lesions of the splenium of the corpus callosum are detected in Japan more often than in other countries, and as a result are prone to over-triage. Taking this into consideration, in the event of transient lesions of the splenium of the corpus callosum, the utmost attention must be paid to clinical symptoms and history relating to any of the aforementioned serious conditions.
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  • 文章类型: Journal Article
    Some therapeutic side-effects result from simultaneous activation of homolog receptors by the same ligand. Tropomyosin receptor kinases (TrkA, TrkB and TrkC) play a major role in the development and biology of neurons through neurotrophin signaling. The wide range of cross-interactions between Trk receptors and neurotrophins vary in selectivity, affinity and function. In this study, we discuss new perspectives to the manipulation of side-effects via a better understanding of the cross-interactions at the molecular level, derived by computational methods. Available crystal structures of Trk receptors and neurotrophins are a valuable resource for exploitation via molecular mechanics (MM) and dynamics (MD). The study of the energetics and dynamics of neurotrophins or neurotrophic peptides interacting with Trk receptors will provide insight to structural regions that may be candidates for drug targeting and signaling pathway selection.
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