Distal Myopathies

远端肌病
  • 文章类型: Journal Article
    目的:肌原纤维性肌病(MFM)和远端肌病(DM)的诊断过程特别复杂,因为有大量的致病基因,仍然存在分子上不确定的疾病实体,以及两个类别之间的重叠特征。这项研究旨在表征受MFM和DM影响的大量患者,并确定这些疾病最重要的诊断和预后方面。
    方法:这项回顾性多中心国家研究包括肌病病理诊断为MFM或临床诊断为DM的患者。人口统计,遗传,临床,匿名患者的组织病理学数据来自意大利肌学协会网络的神经肌肉中心.
    结果:有关132例MFM患者的数据(平均年龄57.0±15.8岁,49%女性)和298例DM患者(平均年龄50.7±15.9岁,40%的女性)来自20个神经肌肉中心。69例患者符合两组的标准(远端肌病与肌原纤维病理,DM-MP)。在63%的患者中实现了分子确认。52%的MFM患者在任一DES中携带致病变异(n=30),MYOT(n=20),或DNAJB6(n=18),也是DM-MP中最常见的致病基因,而GNE(n=44)和MYH7(n=23)是DM中最常携带致病变异的基因。发病的平均年龄从MYH7和DYSF致病变异患者的<25岁到肌病患者的59岁不等。据报道,29%的MFM患者和16%的DM患者有心脏受累,DES和MYH7变异与心肌病的发展显着相关。呼吸损害在患有TTN和DES变异的患者中更为普遍,在其他疾病如GNE肌病和异常疾病中很少见。相反,它们是相关的,连同DNAJB6相关和PLIN4相关的肌病,在疾病过程中有失去行走的风险。
    结论:意大利MFM和DM患者队列概括了两组之间的表型异质性和部分重叠。然而,与所遇到的表型变异性形成相对对比,只有5个基因占大多数的分子诊断。特定的遗传实体与发生心肺并发症或失去下床活动的风险显着增加有关。具有相关的预后意义。
    OBJECTIVE: The diagnostic process for myofibrillar myopathies (MFM) and distal myopathies (DM) is particularly complex because of the large number of causative genes, the existence of still molecularly undefined disease entities, and the overlapping features between the 2 categories. This study aimed to characterize a large cohort of patients affected by MFM and DM and identify the most important diagnostic and prognostic aspects of these diseases.
    METHODS: Patients with either a myopathological diagnosis of MFM or a clinical diagnosis of DM were included in this retrospective multicentric national study. Demographic, genetic, clinical, and histopathologic data of anonymized patients were collected from the neuromuscular centers of the Italian Association of Myology network.
    RESULTS: Data regarding 132 patients with MFM (mean age 57.0 ± 15.8 years, 49% female) and 298 patients with DM (mean age 50.7 ± 15.9 years, 40% female) were gathered from 20 neuromuscular centers. 69 patients fulfilled the criteria for both groups (distal myopathies with myofibrillar pathology, DM-MP). Molecular confirmation was achieved in 63% of the patients. Fifty-two percent of the patients with MFM carried pathogenic variants in either DES (n = 30), MYOT (n = 20), or DNAJB6 (n = 18), which were also the most frequent disease-causing genes in DM-MP, while GNE (n = 44) and MYH7 (n = 23) were the genes most commonly carrying pathogenic variants in DM. The mean age at onset varied from <25 years in patients with causative variants in MYH7 and DYSF to 59 years in patients with myotilinopathies. Cardiac involvement was reported in 29% of patients with MFM and 16% of patients with DM, with DES and MYH7 variants significantly associated with the development of cardiomyopathy. Respiratory impairment was more prevalent in patients with TTN and DES variants and rare in other disorders such as GNE myopathy and dysferlinopathies, which were instead associated, together with DNAJB6-related and PLIN4-related myopathies, with the risk of losing ambulation during the disease course.
    CONCLUSIONS: The Italian cohort of patients with MFM and DM recapitulates the phenotypic heterogeneity and the partial overlap between the 2 groups. However, in relative contrast to the encountered phenotypic variability, only 5 genes accounted for most of the molecular diagnoses. Specific genetic entities are associated with significantly increased risk of developing cardiorespiratory complications or loss of ambulation, which has relevant prognostic implications.
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  • 文章类型: Journal Article
    远端肌病是一组罕见的异质性疾病,主要由遗传因素引起。至少有20个基因与远端肌病有关。我们进行了全外显子组测序,以确定患有远端肌病的家庭中疾病的遗传原因。遵循美国医学遗传学和基因组学学院(ACMG)的指导方针,我们分析了测序结果,并根据突变频率筛选了可疑突变,功能影响,和疾病遗传模式。使用生物信息学方法预测突变的危害性,并确定致病突变。我们鉴定了一个新的氨基酸突变(NP_005467.1:p.S663L)对可能引起家族性远端肌病的GNE基因。此突变是两个相邻核苷酸同时突变的结果(c.1988C>T,c.1989C>A)在密码子中。首先,我们测量了先证者及其家族成员的淋巴母细胞样细胞系(LCLs)中GNE基因的mRNA和蛋白质表达。第二,携带新突变的GNE载体,另外两个已知的致病突变,构建野生型基因并转染HEK293T细胞。研究了这些GNE变体的酶活性,表明p.S663L突变显著降低了双功能GNE酶的活性,而不改变GNE蛋白的表达水平。此外,突变还可能改变GNE蛋白3'末端的免疫原性,可能影响其低聚物的形成。在这项研究中,发现了一种可能导致远端肌病的新的GNE基因突变,扩大与这种疾病相关的基因突变谱。
    Distal myopathies are a group of rare heterogeneous diseases that are mostly caused by genetic factors. At least 20 genes have been associated with distal myopathies. We performed whole-exome sequencing to identify the genetic cause of disease in a family with distal myopathy. Following the American College of Medical Genetics and Genomics (ACMG) guidelines, we analyzed the sequencing results and screened suspicious mutations based on mutation frequency, functional impact, and disease inheritance pattern. The harmfulness of the mutations was predicted using bioinformatics methods, and the pathogenic mutations were determined. We identified a novel amino acid mutation (NP_005467.1:p.S663L) on the GNE gene that may cause familial distal myopathy. This mutation is the result of the simultaneous mutation of two adjacent nucleotides (c.1988C > T, c.1989C > A) in the codon. First, we measured the mRNA and protein expression of the GNE gene in the lymphoblastoid cell lines (LCLs) of the probands and their family members. Second, GNE vectors carrying the novel mutation, two other known pathogenic mutations, and the wild-type gene were constructed and transfected into HEK293T cells. The enzymatic activity of these GNE variants was investigated and showed that the p.S663L mutation significantly reduced the activity of the bifunctional GNE enzyme without altering the expression level of the GNE protein. Furthermore, the mutation may also alter the immunogenicity of the 3\' end of the GNE protein, potentially affecting its oligomer formation. In this study, a novel GNE gene mutation that may cause distal myopathy was identified, expanding the spectrum of genetic mutations associated with this disease.
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  • 文章类型: Journal Article
    细胞中的自噬现象通过消除受损的细胞器和蛋白质聚集体来维持蛋白质平衡。自噬通量的失衡可能导致各种神经退行性疾病中蛋白质聚集体的积累。钙或伴侣对自噬的调节在从细胞中去除蛋白质聚集体中起关键作用。神经肌肉罕见的遗传病,GNE肌病,其特征在于具有β-淀粉样蛋白和tau蛋白聚集体的有边液泡的积累,这可能是由改变的自噬通量引起的。在本研究中,在基于HEK细胞的GNE肌病模型中破译了自噬通量,该模型具有印度裔GNE突变。发现与野生型对照相比,在GNE突变细胞中HSP70伴侣的重折叠活性降低。与野生型细胞相比,自噬标记物LC3II/I比率随着GNE突变细胞中自噬体形成数量的增加而改变。印度裔GNE突变细胞的胞浆钙水平也增加。有趣的是,用HSP70激活剂处理GNE突变细胞,BGP-15恢复了HSP70的表达和重折叠活性,并形成自噬体。用钙螯合剂治疗,BAPTA-AM恢复了细胞质钙水平和自噬小体形成,但没有显着恢复LC3II/I比率。我们的研究为自噬调节的GNE突变特异性反应提供了见解,并为GNE相关肌病的钙信号和HSP70功能开辟了治疗进展领域。
    Autophagy phenomenon in the cell maintains proteostasis balance by eliminating damaged organelles and protein aggregates. Imbalance in autophagic flux may cause accumulation of protein aggregates in various neurodegenerative disorders. Regulation of autophagy by either calcium or chaperone play a key role in the removal of protein aggregates from the cell. The neuromuscular rare genetic disorder, GNE Myopathy, is characterized by accumulation of rimmed vacuoles having protein aggregates of β-amyloid and tau that may result from altered autophagic flux. In the present study, the autophagic flux was deciphered in HEK cell-based model for GNE Myopathy harbouring GNE mutations of Indian origin. The refolding activity of HSP70 chaperone was found to be reduced in GNE mutant cells compared to wild type controls. The autophagic markers LC3II/I ratio was altered with increased number of autophagosome formation in GNE mutant cells compared to wild type cells. The cytosolic calcium levels were also increased in GNE mutant cells of Indian origin. Interestingly, treatment of GNE mutant cells with HSP70 activator, BGP-15, restored the expression and refolding activity of HSP70 along with autophagosome formation. Treatment with calcium chelator, BAPTA-AM restored the cytoplasmic calcium levels and autophagosome formation but not LC3II/I ratio significantly. Our study provides insights towards GNE mutation specific response for autophagy regulation and opens up a therapeutic advancement area in calcium signalling and HSP70 function for GNE related Myopathy.
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  • 文章类型: Journal Article
    背景:GNE肌病是由GNE基因的致病变异引起的超罕见常染色体隐性遗传远端肌病,它编码唾液酸生物合成的关键酶。本研究旨在检查GNE肌病的长期进展,基因型-表型相关性,和并发症,以提供有用的信息来预测患者的进展和设计临床试验使用大量的注册数据在10年期间。
    方法:我们分析了来自日本国家注册局的220名日本GNE肌病患者。基因策展人根据基因分析报告确认了诊断结果。我们分析了由主治医师完成的登记表和每年更新的项目。
    结果:总计,220名参与者中有197名(89.5%)在至少一个等位基因中携带p.D207V或p.V603L。p.V603L纯合子(n=48)的中位疾病持续时间估计为10年,而90%以上的p.D207V/p.根据Kaplan-Meier分析,估计V603L复合杂合子甚至在疾病发作后20年仍可行走(p<0.001)。此外,发病年龄较小的参与者,无论基因型如何,均较早失去下床活动.随着疾病进展,观察到呼吸功能下降,特别是在p.V603L纯合子中,而没有p.D207V/p.V603L复合杂合子呈下降趋势。
    结论:本研究表明基因型之间在疾病进展和呼吸功能方面存在很大差异。此外,在GNE肌病患者中,无论基因型如何,发病年龄都是疾病严重程度的指标.这些结果可能有助于在临床试验中对患者进行分层并预测疾病进展。
    BACKGROUND: GNE myopathy is an ultra-rare autosomal recessive distal myopathy caused by pathogenic variants of the GNE gene, which encodes a key enzyme in sialic acid biosynthesis. The present study aimed to examine the long-term progression of GNE myopathy, genotype-phenotype correlations, and complications to provide useful information for predicting patient progression and designing clinical trials using a large collection of registry data over a 10-year period.
    METHODS: We analyzed 220 Japanese patients with GNE myopathy from a national registry in Japan. Diagnoses were confirmed by genetic curators based on genetic analysis reports. We analyzed registration sheets and annually updated items completed by attending physicians.
    RESULTS: In total, 197 of 220 participants (89.5%) carried p.D207V or p.V603L in at least one allele. The median disease duration to loss of ambulation was estimated to be 10 years in p.V603L homozygotes (n = 48), whereas more than 90% of p.D207V/p.V603L compound heterozygotes were estimated to be ambulatory even 20 years after disease onset according to Kaplan-Meier analysis (p < 0.001). Moreover, participants with a younger age of onset lost ambulation earlier regardless of genotype. A decline in respiratory function was observed as the disease progressed, particularly in p.V603L homozygotes, whereas none of the p.D207V/p.V603L compound heterozygotes showed a decline.
    CONCLUSIONS: The present study demonstrated large differences in disease progression and respiratory function between genotypes. Moreover, age of onset was found to be an indicator of disease severity regardless of genotype in GNE myopathy patients. These results may help stratify patients in clinical trials and predict disease progression.
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  • 文章类型: Journal Article
    肌球蛋白抑制剂mavacamten通过靶向肌球蛋白ATPase活性来减轻心脏收缩过度,从而改变了阻塞性肥厚型心肌病(HCM)的治疗。这种治疗机制已被证明对患有HCM的患者有效,而与肌球蛋白中的原发性基因突变无关。在本期JCI中,Buvoli等人。报告说,肌肉过度收缩是Laing远端肌病的潜在肌肉功能障碍的发病机制,一种以改变β肌球蛋白重链杆区的突变为特征的疾病。作者进行了详细的生理,分子,和生物力学分析,并证明肌球蛋白ATPase抑制可以在很大程度上纠正肌肉异常。这些发现为Laing远端肌病和其他潜在的肌病提供了治疗途径。该评论强调了重新评估肌球蛋白活性在整个肌病中的作用对于靶向肌球蛋白抑制剂治疗骨骼肌疾病的潜在发展的重要性。
    The myosin inhibitor mavacamten has transformed the management of obstructive hypertrophic cardiomyopathy (HCM) by targeting myosin ATPase activity to mitigate cardiac hypercontractility. This therapeutic mechanism has proven effective for patients with HCM independent of having a primary gene mutation in myosin. In this issue of the JCI, Buvoli et al. report that muscle hypercontractility is a mechanism of pathogenesis underlying muscle dysfunction in Laing distal myopathy, a disorder characterized by mutations altering the rod domain of β myosin heavy chain. The authors performed detailed physiological, molecular, and biomechanical analyses and demonstrated that myosin ATPase inhibition can correct a large extent of muscle abnormalities. The findings offer a therapeutic avenue for Laing distal myopathy and potentially other myopathies. This Commentary underscores the importance of reevaluating myosin activity\'s role across myopathies in general for the potential development of targeted myosin inhibitors to treat skeletal muscle disorders.
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  • 文章类型: Journal Article
    β-肌球蛋白基因(MYH7)的卷曲螺旋棒区域内的脯氨酸取代是导致Laing远端肌病(MPD1)的主要突变,以远端/近端肌肉进行性无力为特征的常染色体显性疾病。我们报道MDP1突变R1500P,在我们认为是第一个这种疾病的小鼠模型中进行了研究,尽管在指导粗丝组装的结构杆域中,但对肌球蛋白运动活动产生不利影响。在孤立的突变肌肉上进行的收缩性实验,肌原纤维,和肌纤维确定肌肉疲劳和无力表型,肌动蛋白-肌球蛋白脱离率增加,以及肌球蛋白头部向更具反应性的无序松弛(DRX)状态的构象偏移,导致过度收缩和更大的ATP消耗。同样,MPD1患者肌肉活检的分子分析显示肌节DRX含量显着增加,如在引起肥厚型心肌病的肌球蛋白运动结构域突变子集中观察到的。最后,口服MYK-581,一种小分子,可减少DRX构型中的头部数量,显着改善了R1500P转基因小鼠的有限运行能力,并纠正了患者肌原纤维的DRX状态增加。这些研究为脯氨酸杆突变的分子发病机理提供了证据,并为肌球蛋白调节剂的治疗进展奠定了基础。
    Proline substitutions within the coiled-coil rod region of the β-myosin gene (MYH7) are the predominant mutations causing Laing distal myopathy (MPD1), an autosomal dominant disorder characterized by progressive weakness of distal/proximal muscles. We report that the MDP1 mutation R1500P, studied in what we believe to be the first mouse model for the disease, adversely affected myosin motor activity despite being in the structural rod domain that directs thick filament assembly. Contractility experiments carried out on isolated mutant muscles, myofibrils, and myofibers identified muscle fatigue and weakness phenotypes, an increased rate of actin-myosin detachment, and a conformational shift of the myosin heads toward the more reactive disordered relaxed (DRX) state, causing hypercontractility and greater ATP consumption. Similarly, molecular analysis of muscle biopsies from patients with MPD1 revealed a significant increase in sarcomeric DRX content, as observed in a subset of myosin motor domain mutations causing hypertrophic cardiomyopathy. Finally, oral administration of MYK-581, a small molecule that decreases the population of heads in the DRX configuration, significantly improved the limited running capacity of the R1500P-transgenic mice and corrected the increased DRX state of the myofibrils from patients. These studies provide evidence of the molecular pathogenesis of proline rod mutations and lay the groundwork for the therapeutic advancement of myosin modulators.
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  • 文章类型: Journal Article
    常染色体隐性Nonaka远端肌病是一种罕见的常染色体隐性遗传病,其特征是远端肌肉进行性变性,导致肌肉无力和握力下降。它主要与GNE基因突变有关,其编码唾液酸生物合成的关键酶(UDP-N-乙酰葡糖胺2-差向异构酶/N-乙酰甘露糖胺激酶)。进行这项研究是为了使用全外显子组测序(WES)在6名有或没有周围神经病变的独立远端肌病患者中发现GNE突变。对突变型GNE蛋白进行计算机致病性预测和3D结构变化的模拟。因此,我们确定了五种致病性或可能的致病性错义变体:c.86T>C(p。Met29Thr),c.527A>T(p。Asp176Val),c.782T>C(p。Met261Thr),c.1714G>C(p。Val572Leu),和c.1771G>A(p。Ala591Thr)。五个受影响的个体显示出复合杂合突变,只有一名患者发现纯合突变。两名患者显示未报告的杂合突变组合。我们观察到一些特定的临床特征,如远端肌病与远端遗传性周围神经病变的复杂表型,腿部比手更早出现无力,以及具有相同复合杂合突变组的两名患者之间的临床异质性。我们对这些遗传原因的发现扩大了与GNE突变相关的临床范围,并可以帮助准备治疗策略。
    Autosomal recessive Nonaka distal myopathy is a rare autosomal recessive genetic disease characterized by progressive degeneration of the distal muscles, causing muscle weakness and decreased grip strength. It is primarily associated with mutations in the GNE gene, which encodes a key enzyme of sialic acid biosynthesis (UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase). This study was performed to find GNE mutations in six independent distal myopathy patients with or without peripheral neuropathy using whole-exome sequencing (WES). In silico pathogenic prediction and simulation of 3D structural changes were performed for the mutant GNE proteins. As a result, we identified five pathogenic or likely pathogenic missense variants: c.86T>C (p.Met29Thr), c.527A>T (p.Asp176Val), c.782T>C (p.Met261Thr), c.1714G>C (p.Val572Leu), and c.1771G>A (p.Ala591Thr). Five affected individuals showed compound heterozygous mutations, while only one patient revealed a homozygous mutation. Two patients revealed unreported combinations of combined heterozygous mutations. We observed some specific clinical features, such as complex phenotypes of distal myopathy with distal hereditary peripheral neuropathy, an earlier onset of weakness in legs than that of hands, and clinical heterogeneity between two patients with the same set of compound heterozygous mutations. Our findings on these genetic causes expand the clinical spectrum associated with the GNE mutations and can help prepare therapeutic strategies.
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  • 文章类型: Case Reports
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  • 文章类型: Journal Article
    GNEM(GNE肌病)是一种罕见的神经肌肉疾病,由于唾液酸生物合成GNE酶(UDP-N-乙酰葡糖胺2-差向异构酶/N-乙酰甘露糖胺激酶)的双等位基因突变而引起。最近已经阐明了GNE在其他细胞功能中的直接或间接作用。IGF-1R的去唾液酸化导致线粒体功能障碍导致细胞凋亡,而β1整合素受体的去唾液酸化导致F-肌动蛋白组装改变,破坏细胞骨架组织和缓慢的细胞迁移。在GNE突变存在下的其他细胞缺陷包括改变的ER氧化还原状态和伴侣表达,例如HSP70或PrdxIV。目前,没有治疗GNEM的方法。可能的治疗试验集中在补充唾液酸,ManNAc,唾液酸乳糖和基因治疗,减缓疾病进展。在本研究中,我们分析了小分子如BGP-15(HSP70调节剂)的作用,IGF-1(IGF-1R配体)和CGA(cofilin激活剂)对GNE杂合子敲除L6大鼠骨骼肌细胞系(SKM-GNEHz)的细胞表型的影响。对于SKM-GNEHz,BGP-15治疗可将GNE差向异构酶活性提高40%,并将ER压力降低45%。用IGF-1处理使差向异构酶活性提高了37.5%,F-肌动蛋白组装100%,SKM-GNEHz的细胞迁移高达36%(36小时),萎缩0.44倍。用CGA处理可恢复49%的差向异构酶活性,在SKM-GNEHz中,F-肌动蛋白组装达到132%,细胞迁移达到41%(24小时)。我们的研究表明,用这些小效应分子治疗可减少SKM-GNEHz中观察到的有害表型,因此,提供对GNEM潜在治疗靶点的见解。
    GNEM (GNE Myopathy) is a rare neuromuscular disease caused due to biallelic mutations in sialic acid biosynthetic GNE enzyme (UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine Kinase). Recently direct or indirect role of GNE in other cellular functions have been elucidated. Hyposialylation of IGF-1R leads to apoptosis due to mitochondrial dysfunction while hyposialylation of β1 integrin receptor leads to altered F-actin assembly, disrupted cytoskeletal organization and slow cell migration. Other cellular defects in presence of GNE mutation include altered ER redox state and chaperone expression such as HSP70 or PrdxIV. Currently, there is no cure to treat GNEM. Possible therapeutic trials focus on supplementation with sialic acid, ManNAc, sialyllactose and gene therapy that slows the disease progression. In the present study, we analyzed the effect of small molecules like BGP-15 (HSP70 modulator), IGF-1 (IGF-1R ligand) and CGA (cofilin activator) on cellular phenotypes of GNE heterozygous knock out L6 rat skeletal muscle cell line (SKM‑GNEHz). Treatment with BGP-15 improved GNE epimerase activity by 40 % and reduced ER stress by 45 % for SKM‑GNEHz. Treatment with IGF-1 improved epimerase activity by 37.5 %, F-actin assembly by 100 %, cell migration upto 36 % (36 h) and atrophy by 0.44-fold for SKM‑GNEHz. Treatment with CGA recovered epimerase activity by 49 %, F-actin assembly by 132 % and cell migration upto 41 % (24 h) in SKM‑GNEHz. Our study shows that treatment with these small effector molecules reduces the detrimental phenotype observed in SKM‑GNEHz, thereby, providing insights into potential therapeutic targets for GNEM.
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  • 文章类型: Journal Article
    目的:GNE肌病是由GNE基因的致病变异引起的一种罕见的常染色体隐性遗传疾病,这是唾液酸生物合成途径所必需的。尽管已经报道了超过300个GNE变体,一些患者仍未被诊断为单等位基因致病变异。这项研究旨在分析整个GNE基因组区域,以识别新的致病变异。
    方法:纳入具有临床相容性GNE肌病和GNE基因单等位基因致病变异的患者。使用包括外显子2定量聚合酶链反应和纳米孔长读单分子测序(LRS)在内的综合方法验证了其他GNE致病变体。
    结果:深度内含子GNE变体,c.862+870C>T,在来自8个无关家庭的9名患者中发现。这种变异产生了一个隐秘的剪接位点,导致外显子5和6之间的新型假外显子的激活。它导致额外的146个核苷酸插入到messengerRNA(mRNA)中,预测其产生截短的humanGNE1(hGNE1)蛋白。肌肉组织花生凝集素(PNA)凝集素染色显示黏蛋白O-聚糖对肌膜糖蛋白的唾液酸化作用减弱。值得注意的是,1/3的c.862+870C>T变异体患者出现血小板减少.在所有这些患者中都发现了具有深内含子GNE变体的常见核心单倍型。
    结论:具有假外显子激活的转录本可能通过无义介导的mRNA衰变影响唾液酸生物合成,或导致截短的hGNE1蛋白,这会干扰正常的酶功能。鉴于LRS在检测难以发现的致病变体方面的功效,预计LRS将更频繁地纳入遗传分析中。
    OBJECTIVE: GNE myopathy is a rare autosomal recessive disorder caused by pathogenic variants in the GNE gene, which is essential for the sialic acid biosynthesis pathway. Although over 300 GNE variants have been reported, some patients remain undiagnosed with monoallelic pathogenic variants. This study aims to analyze the entire GNE genomic region to identify novel pathogenic variants.
    METHODS: Patients with clinically compatible GNE myopathy and monoallelic pathogenic variants in the GNE gene were enrolled. The other GNE pathogenic variant was verified using comprehensive methods including exon 2 quantitative polymerase chain reaction and nanopore long-read single-molecule sequencing (LRS).
    RESULTS: A deep intronic GNE variant, c.862+870C>T, was identified in nine patients from eight unrelated families. This variant generates a cryptic splice site, resulting in the activation of a novel pseudoexon between exons 5 and 6. It results in the insertion of an extra 146 nucleotides into the messengerRNA (mRNA), which is predicted to result in a truncated humanGNE1(hGNE1) protein. Peanut agglutinin(PNA) lectin staining of muscle tissues showed reduced sialylation of mucin O-glycans on sarcolemmal glycoproteins. Notably, a third of patients with the c.862+870C>T variant exhibited thrombocytopenia. A common core haplotype harboring the deep intronic GNE variant was found in all these patients.
    CONCLUSIONS: The transcript with pseudoexon activation potentially affects sialic acid biosynthesis via nonsense-mediated mRNA decay, or resulting in a truncated hGNE1 protein, which interferes with normal enzyme function. LRS is expected to be more frequently incorporated in genetic analysis given its efficacy in detecting hard-to-find pathogenic variants.
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