Definition of life

  • 文章类型: Journal Article
    定义,生活的起源和娱乐仍然难以捉摸。正如其他人所建议的,只有当我们把生活归入还原论的物理术语时,我们才能解决这些问题。为此,这项工作提出了生命现象是两种耗散机制的产物。从他们那里,一个人描述了现存的生物生命,并为其起源推断了一个可测试的场景。提出的生命理论允许其复制,重新解释生态进化,并为寻找生命创造新的限制。
    The definition, origin and recreation of life remain elusive. As others have suggested, only once we put life into reductionist physical terms will we be able to solve those questions. To that end, this work proposes the phenomenon of life to be the product of two dissipative mechanisms. From them, one characterises extant biological life and deduces a testable scenario for its origin. The proposed theory of life allows its replication, reinterprets ecological evolution and creates new constraints on the search for life.
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  • 文章类型: Historical Article
    ErvinBauer(1890-1938)对当代生物学做出了历史贡献,为生命提供了新的定义,定义了理论生物学的内容。他在不同的国家工作,被深刻的历史事件所困扰。这些历史事件必然影响了他的命运,最终导致了他的生命和妻子的生命的暴力损失。他的作品和他的生命理论有着不亚于他个人生活史的复杂历史。鲍尔的主要著作“理论生物学”于1935年以俄语出版。提交人和他的妻子Stefánia成为大清洗的受害者。他们于1938年被处决,所有出版物都被禁止,“理论生物学”的大部分副本被销毁。Ervin和StefániaBauer于1956年康复,但Bauer作品的重新出版被推迟。1967年的“理论生物学”的第一版不是俄语,而是翻译成匈牙利语,Bauer的母语.俄罗斯首次转载“理论生物学”,其中原始的俄语章节后面是简短的英语摘要,1982年在匈牙利出版。这个版本是由匈牙利和俄罗斯科学家编写的。最著名的俄语版“理论生物学”于2002年在圣彼得堡出版。Bauer的主要作品“理论生物学”的完整英文翻译仍然非常出色。
    Ervin Bauer (1890-1938) made historical contributions to contemporary biology, provided a new definition of life, defined the contents of theoretical biology. He worked in different countries, perturbed by deep historical events. These historical events necessarily impacted his fate and finally led to the violent loss of his life and the life of his wife. His work and with it his theory of life had a no less complicated history than the history of his personal life. Bauer\'s main work \"Theoretical Biology\" was published in 1935 in Russian. The author and his wife Stefánia became victims of the Great Purge. They were executed in 1938, all their publications were banned and most copies of \"Theoretical Biology\" destroyed. Ervin and Stefánia Bauer were rehabilitated in 1956 but renewed publication of Bauer\'s works was delayed. The first reprint edition of \"Theoretical Biology\" of 1967 was not in Russian, but was a translation into Hungarian, the native language of Bauer. The first Russian reprint of \"Theoretical Biology\", in which the original Russian chapters are followed by short English summaries, was published in Hungary in 1982. This edition was prepared by Hungarian and Russian scientists. The best-known Russian edition of \"Theoretical Biology\" was published in 2002 in St. Petersburg. A complete English translation of Bauer\'s main work \"Theoretical Biology\" is still outstanding.
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  • 文章类型: Journal Article
    回顾了生物系统的主要独特特征,并制定了生命的四个必要和充分的属性,基于ErvinBauer的想法.分析了在生命起源过程中这些属性中每个属性出现的可能性。因此,呈现了生命起源的不同场景,他们所有的优点和缺点。接下来,讨论了生物进化的主流,认为它是一般复杂的特例,结构被定义为结构复杂性的定量度量。通过引入基于“冻结”模式的后耗散结构和棘轮过程的概念,证明了它们在生物进化背后的生物结构生成中的作用。此外,建议所有生物都可以分为微型(单细胞)和大型(多细胞)生物,它们之间的差异甚至比原核生物和单细胞真核生物之间的差异更大。第五,足够,但不是生命的必要属性,层次性,是公式化的,这完全适用于宏观生活。还表明,生物体主要是化学动力学系统,而不是热力学系统,并制定了三个基本的生物化学动力学定律。最后,生物的十五个基本特征,分为四个基本块,是总结的。
    The main unique features of biological systems are reviewed, and four necessary and sufficient attributes of life are formulated, based on the ideas of Ervin Bauer. The possibility of the occurrence of each of these attributes during the origin of life is analyzed. As a result, different scenarios for the origin of life are presented, with their pros and cons. Next, the mainstream of biological evolution is discussed, considering it as a special case of general complexification, and structuredness is defined as a quantitative measure of structural complexity. By introducing the concepts of post-dissipative structure and ratcheting process based on \"frozen\" patterns, their role in the generation of biological structures underlying biological evolution is demonstrated. Furthermore, it is proposed that all living things can be divided into micro- (unicellular) and macro- (multicellular) creatures, which differ from each other even more radically than the difference between prokaryotes and unicellular eukaryotes. Then the fifth, sufficient, but not necessary attribute of life, hierarchicality, is formulated, which is fully applicable only to macrolife. It is also shown that living organisms are primarily chemodynamic rather than thermodynamic systems, and three basic laws of biochemodynamics are formulated. Finally, fifteen basic features of living beings, grouped into four basic blocks, are summarized.
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  • 文章类型: Journal Article
    在本文中,我们从地球系统的角度探讨了系统理论和热力学的相关性和集成。建议一起,这些领域解释了进化,组织,地球上生命的功能和方向性。我们首先总结历史和当前对生活本身定义的思考。然后,我们调查一个生命单位的证据。鉴于生命的任何定义及其组织层次都是交织在一起的,我们从能量的角度探索地球系统的结构和功能,通过概述与分子有关的相关热力学理论,新陈代谢,细胞,个人,人口,物种,生态系统和生物群落组织。接下来,我们从地球系统的角度研究系统理论和热力学之间的基本关系,检查自组装的关键特征,自组织(包括自主性),出现,非线性,反馈和次优性。最后,我们从两个具体方面考察了系统理论和热力学的相关性:进化的节奏和方向性以及生态演替的方向性和可预测过程。我们讨论了熵驱动在理解利他主义中的重要性,多细胞,互惠和对抗关系,以及最大熵产生理论如何解释被认为是证明中间干扰假说的模式。
    In this paper we explore the relevance and integration of system theory and thermodynamics in terms of the Earth system. It is proposed that together, these fields explain the evolution, organization, functionality and directionality of life on Earth. We begin by summarizing historical and current thinking on the definition of life itself. We then investigate the evidence for a single unit of life. Given that any definition of life and its levels of organization are intertwined, we explore how the Earth system is structured and functions from an energetic perspective, by outlining relevant thermodynamic theory relating to molecular, metabolic, cellular, individual, population, species, ecosystem and biome organization. We next investigate the fundamental relationships between systems theory and thermodynamics in terms of the Earth system, examining the key characteristics of self-assembly, self-organization (including autonomy), emergence, non-linearity, feedback and sub-optimality. Finally, we examine the relevance of systems theory and thermodynamics with reference to two specific aspects: the tempo and directionality of evolution and the directional and predictable process of ecological succession. We discuss the importance of the entropic drive in understanding altruism, multicellularity, mutualistic and antagonistic relationships and how maximum entropy production theory may explain patterns thought to evidence the intermediate disturbance hypothesis.
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  • 文章类型: Journal Article
    任何进化论的最终目标都应该是描绘一个综合系统的轮廓来回答这个问题:生命(在其所有的复杂性中)是如何进化的(可以称为巨型进化)?但是如何合理地定义“生命”呢?我的答案(1994-2023)是:“生命”听起来像一个名词,但表示一个活动,因此是一个动词。寿命(L)仅表示由任何类型的发送者-接收者在其所有级别(至少15个)的隔室组织中执行的所有通信行为(信息传递)(C)的总和(∑):L=∑C。“连通隔间”更适合用作结构的通用单元,功能和进化比细胞,最小的单位。通过重视交流活动,就像重视分子生物学的中心教条一样,大量的新见解展现出来。主要如下。(1)生活区不仅有遗传记忆(DNA),但也是一个仍然神秘的认知和电记忆系统(因此是一个三重记忆系统)。(2)复杂的隔室可以有多达三种类型的后代:遗传后代/孩子,学生/学习者和电工。(3)对适应特别重要,任何通信行为都是解决问题的行为,因为所有消息都需要解码。因此,通过在选择之前解决问题,生命本身是其自身进化的驱动力(一个非常聪明但违反直觉和意想不到的逻辑推论)。也许,这是\'生力军\'哲学家和诺贝尔奖获得者(1927年)亨利·伯格森寻找但没有找到。
    It should be the ultimate goal of any theory of evolution to delineate the contours of an integrative system to answer the question: How does life (in all its complexity) evolve (which can be called mega-evolution)? But how to plausibly define \'life\'? My answer (1994-2023) is: \'life\' sounds like a noun, but denotes an activity, and thus is a verb. Life (L) denotes nothing else than the total sum (∑) of all acts of communication (transfer of information) (C) executed by any type of senders-receivers at all their levels (up to at least 15) of compartmental organization: L = ∑C. The \'communicating compartment\' is better suited to serve as the universal unit of structure, function and evolution than the cell, the smallest such unit. By paying as much importance to communication activity as to the Central Dogma of molecular biology, a wealth of new insights unfold. The major ones are as follows. (1) Living compartments have not only a genetic memory (DNA), but also a still enigmatic cognitive and an electrical memory system (and thus a triple memory system). (2) Complex compartments can have up to three types of progeny: genetic descendants/children, pupils/learners and electricians. (3) Of particular importance to adaptation, any act of communication is a problem-solving act because all messages need to be decoded. Hence through problem-solving that precedes selection, life itself is the driving force of its own evolution (a very clever but counterintuitive and unexpected logical deduction). Perhaps, this is the \'vital force\' philosopher and Nobel laureate (in 1927) Henri Bergson searched for but did not find.
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  • 文章类型: Journal Article
    生物体的多种内部运作很难与定义“活着”状态的单个特征相协调。的确,生命的定义依赖于新兴属性(生长,进化的能力,机构)仅是内在功能的症状。经验研究表明,包括棘轮或旋转酶和核酶在内的生物分子经历了由热力学梯度直接或间接驱动的重复构象状态变化。它们表现出不同的结构,而是依赖于定向物理运动(DNA转录,翻译,细胞骨架运输)并共享由热力学梯度驱动的重复单平面构象变化的原理,产生可靠的单向运动:“热机”利用热力学不平衡来做功。认识到不同的生物分子表现出涉及定向运动的构象状态变化,在自我调节的网络中工作,允许机械定义:生命是一个自我调节的过程,物质经历循环,将热力学不平衡转化为定向运动的单平面构象状态变化,执行局部减少熵的工作。“生物”是包括单元的自治网络的结构,该网络利用热力学梯度来驱动执行工作的单平面构象状态变化。这些原则独立于任何特定的化学环境,并且可以应用于其他生物圈。
    The multifarious internal workings of organisms are difficult to reconcile with a single feature defining a state of \'being alive\'. Indeed, definitions of life rely on emergent properties (growth, capacity to evolve, agency) only symptomatic of intrinsic functioning. Empirical studies demonstrate that biomolecules including ratcheting or rotating enzymes and ribozymes undergo repetitive conformation state changes driven either directly or indirectly by thermodynamic gradients. They exhibit disparate structures, but govern processes relying on directional physical motion (DNA transcription, translation, cytoskeleton transport) and share the principle of repetitive uniplanar conformation changes driven by thermodynamic gradients, producing dependable unidirectional motion: \'heat engines\' exploiting thermodynamic disequilibria to perform work. Recognition that disparate biological molecules demonstrate conformation state changes involving directional motion, working in self-regulating networks, allows a mechanistic definition: life is a self-regulating process whereby matter undergoes cyclic, uniplanar conformation state changes that convert thermodynamic disequilibria into directed motion, performing work that locally reduces entropy. \'Living things\' are structures including an autonomous network of units exploiting thermodynamic gradients to drive uniplanar conformation state changes that perform work. These principles are independent of any specific chemical environment, and can be applied to other biospheres.
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  • 文章类型: Journal Article
    生命起源的问题是一个顽强的问题,挑战许多科学分支,但也是极其多方面的。当益生元化学和微古生物学将这个问题重新表述为解释地球上生命在过去深处的外观时,系统化学和合成生物学通常将问题理解为独立于历史约束而证明从非生命物质合成新的生命物质。这一贡献的目的是解开科学中发现的生命起源问题的不同读数。我们确定了三个主要维度,可以根据上下文对问题进行不同的约束:历史充分性,自然自发性,和我们所知的生活相似。我们认为,当生命起源问题最受限制时,需要解释的东西-解释的认知状态与近似真实不同,而当限制最宽松时,则完全是推测性的。认知状态的这种差异引发了生命起源问题的性质的转变,从最受约束的情况下的寻求解释的问题转变为较小约束的情况下的事实确立问题。我们还探讨了对生命起源问题的某些解释的答案如何与其他解释有关。
    The question of the origin of life is a tenacious question that challenges many branches of science but is also extremely multifaceted. While prebiotic chemistry and micropaleontology reformulate the question as that of explaining the appearance of life on Earth in the deep past, systems chemistry and synthetic biology typically understand the question as that of demonstrating the synthesis of novel living matter from nonliving matter independently of historical constraints. The objective of this contribution is to disentangle the different readings of the origin-of-life question found in science. We identify three main dimensions along which the question can be differently constrained depending on context: historical adequacy, natural spontaneity, and similarity to life-as-we-know-it. We argue that the epistemic status of what needs to be explained-the explanandum-varies from approximately true when the origin-of-life question is the most constrained to entirely speculative when the constraints are the most relaxed. This difference in epistemic status triggers a shift in the nature of the origin-of-life question from an explanation-seeking question in the most constrained case to a fact-establishing question in the lesser-constrained ones. We furthermore explore how answers to some interpretations of the origin-of-life questions matter for other interpretations.
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  • 文章类型: Journal Article
    这是生物学和天体生物学的各种研究人员如何探索如何定义生物体的问题的摘要-基于在生物体中观察到的功能或结构的定义,或者在系统方面,或者像闭包这样的数学概念,手性,量子力学和热力学,或者生物符号学,或达尔文进化论-澄清该领域,使人工智能的努力更容易取得进展。描述了当前的想法,以促进天体生物学家和计算机科学家之间的工作,每个人都与生物体有关。一个四参数框架被呈现为一个脚手架,后来被发展成机器缺乏被认为活着的东西:系统,进化,能量和意识,包括Jagers算子和对偶闭包的思想。开发了一种新的意识定义,它描述了具有和不具有可传播特性的心理对象,这有助于澄清机器中的意识如何被研究为与系统中的选择函数相关的紧急过程。关于如何量化的观点,作用于核酸,对系统行为设置自然限制是对生物发生问题的部分解决方法。
    This is a digest of how various researchers in biology and astrobiology have explored questions of what defines living organisms-definitions based on functions or structures observed in organisms, or on systems terms, or on mathematical conceptions like closure, chirality, quantum mechanics and thermodynamics, or on biosemiotics, or on Darwinian evolution-to clarify the field and make it easier for endeavors in artificial intelligence to make progress. Current ideas are described to promote work between astrobiologists and computer scientists, each concerned with living organisms. A four-parameter framework is presented as a scaffold that is later developed into what machines lack to be considered alive: systems, evolution, energy and consciousness, and includes Jagers operators and the idea of dual closure. A novel definition of consciousness is developed which describes mental objects both with and without communicable properties, and this helps to clarify how consciousness in machines may be studied as an emergent process related to choice functions in systems. A perspective on how quantization, acting on nucleic acids, sets up natural limits to system behavior is offered as a partial address to the problem of biogenesis.
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  • 文章类型: Journal Article
    在这里,我们根据现有基因的功能和繁殖以及新基因的创造,提出了生命的新生物学定义,适用于单细胞和多细胞生物。首先,我们创造了一个新的术语“遗传信息代谢”,包括功能,繁殖,以及基因的创造及其在遗传信息的活体和非活体载体中的分布。包含这个概念,生命被定义为提供遗传信息代谢的有组织的物质。此外,我们将生命的一般生物学功能阐明为Tetz生物学定律:“生命的一般生物学功能是提供遗传信息代谢”,并对生命进行了新的定义:“生命是提供遗传信息代谢的有组织的物质”。生命的新定义和Tetz生物学定律允许在提供遗传信息代谢的基础上以新的方式区分地球和其他星球上的生物和非生物物体。
    Here we have proposed a new biological definition of life based on the function and reproduction of existing genes and creation of new ones, which is applicable to both unicellular and multicellular organisms. First, we coined a new term \"genetic information metabolism\" comprising functioning, reproduction, and creation of genes and their distribution among living and non-living carriers of genetic information. Encompassing this concept, life is defined as organized matter that provides genetic information metabolism. Additionally, we have articulated the general biological function of life as Tetz biological law: \"General biological function of life is to provide genetic information metabolism\" and formulated novel definition of life: \"Life is an organized matter that provides genetic information metabolism\". New definition of life and Tetz biological law allow to distinguish in a new way living and non-living objects on Earth and other planets based on providing genetic information metabolism.
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  • 文章类型: Historical Article
    暂无摘要。
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