DNA double strand breaks

  • 文章类型: Journal Article
    目的:PARP抑制剂(PARPi),他拉索帕尼(BMN673),有效和特异性放射增敏癌细胞。放射敏化是由电离辐射(IR)诱导的DNA双链断裂(DSB)向不依赖PARP1的修复转移介导的,替代端连接(alt-EJ)。DNA聚合酶theta(Polθ)是这种不依赖PARP1的alt-EJ途径的关键组成部分,我们在此表明其抑制可以进一步使talazoparib处理的细胞辐射敏感。本工作的目的是探索在HR丰富的癌细胞中通过Polθ抑制剂增强的talazoparib放射增敏作用的机制和动力学。
    方法:对PARPis的放射增敏,talazoparib,奥拉帕利,rucaparib和veliparib通过克隆形成的存活率进行评估。用PARPis和/或用Polθ抑制剂ART558或新生霉素处理Polθ丰富和缺乏的细胞。通过使用siRNA下调CtIP和MRE11表达来研究DNA末端切除的作用。通过对γH2AX病灶评分评估DSB修复。使用G2特异性细胞遗传学分析评估染色体异常的形成作为alt-EJ功能的证据。
    结果:Talazoparib发挥了明显的放射增敏作用,在测试的癌细胞系中有所不同;然而,在正常细胞中无法检测到放射致敏作用.其他常用的PARPis,奥拉帕利,在我们的条件下,veliparib或rucaparib是无效的放射增敏剂。尽管对Pole的遗传消融或药理学抑制仅轻度放射致敏的癌细胞,talazoparib处理的细胞明显进一步放射增敏。机械上,talazoparib通过以CtIP和MRE11依赖性方式增强DNA末端切除,将DSB分流到Polθ依赖性alt-EJ-在低,但不是高IR剂量。暴露于Pole抑制剂的talazoparib处理的细胞中的染色体易位分析表明,PARP1-和Pole依赖性alt-EJ途径可以补充,但也互相备份。
    结论:我们建议talazoparib促进低剂量,CtIP/MRE11依赖性切除,并增加了对辐照的HR高的癌细胞的依赖性,关于Polθ介导的alt-EJ。Pole抑制剂与talazoparib的组合抑制了这种选择并导致进一步的放射增敏。结果表明,可以利用Polθ抑制来最大程度地提高临床上HR高肿瘤的talazoparib放射敏感性。
    OBJECTIVE: The PARP inhibitor (PARPi), Talazoparib (BMN673), effectively and specifically radiosensitizes cancer cells. Radiosensitization is mediated by a shift in the repair of ionizing radiation (IR)-induced DNA double-strand breaks (DSBs) toward PARP1-independent, alternative end-joining (alt-EJ). DNA polymerase theta (Polθ) is a key component of this PARP1-independent alt-EJ pathway and we show here that its inhibition can further radiosensitize talazoparib-treated cells. The purpose of the present work is to explore mechanisms and dynamics underpinning enhanced talazoparib radiosensitization by Polθ inhibitors in HR-proficient cancer cells.
    METHODS: Radiosensitization to PARPis, talazoparib, olaparib, rucaparib and veliparib was assessed by clonogenic survival. Polθ-proficient and -deficient cells were treated with PARPis and/or with the Polθ inhibitors ART558 or novobiocin. The role of DNA end-resection was studied by down-regulating CtIP and MRE11 expression using siRNAs. DSB repair was assessed by scoring γH2AX foci. The formation of chromosomal abnormalities was assessed as evidence of alt-EJ function using G2-specific cytogenetic analysis.
    RESULTS: Talazoparib exerted pronounced radiosensitization that varied among the tested cancer cell lines; however, radiosensitization was undetectable in normal cells. Other commonly used PARPis, olaparib, veliparib, or rucaparib were ineffective radiosensitizers under our experimental conditions. Although genetic ablation or pharmacological inhibition of Polθ only mildly radiosensitized cancer cells, talazoparib-treated cells were markedly further radiosensitized. Mechanistically, talazoparib shunted DSBs to Polθ-dependent alt-EJ by enhancing DNA end-resection in a CtIP- and MRE11-dependent manner - an effect detectable at low, but not high IR doses. Chromosomal translocation analysis in talazoparib-treated cells exposed to Polθ inhibitors suggested that PARP1- and Polθ-dependent alt-EJ pathways may complement, but also back up each other.
    CONCLUSIONS: We propose that talazoparib promotes low-dose, CtIP/MRE11-dependent resection and increases the reliance of irradiated HR-proficient cancer cells, on Polθ-mediated alt-EJ. The combination of Polθ inhibitors with talazoparib suppresses this option and causes further radiosensitization. The results suggest that Polθ inhibition may be exploited to maximize talazoparib radiosensitization of HR-proficient tumors in the clinic.
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  • 文章类型: Journal Article
    在精子和卵子发育过程中保持基因组完整性对于生殖成功至关重要。在减数分裂期间,肿瘤抑制因子BRCA1/BRC-1与5/6号染色体结构维持(SMC-5/6)复合物遗传相互作用,促进高保真DNA双链断裂(DSB)修复,但是这些蛋白质调节的特定DSB修复结果仍然未知。使用遗传和细胞学方法监测秀丽隐杆线虫中具有不同修复伙伴的DSB的分辨率,我们证明BRC-1和SMC-5均抑制姐妹交叉重组事件。来自不依赖同系物的DSB修复事件的转换束的测序分析进一步表明BRC-1调节互系物/染色质内非交叉转换束长度。此外,我们发现,BRC-1特异性抑制了中粗线质诱导的DSBs的易错修复。最后,我们揭示了BRC-1和SMC-5/6在调节修复途径接合中的功能相互作用:BRC-1是smc-5突变体中重组酶蛋白定位至DSB所必需的,并通过抑制theta介导的末端连接(TMEJ)增强smc-5突变体中的DSB修复缺陷.这些结果与BRC-1的一些功能作用于SMC-5/6上游以促进重组和抑制易错DSB修复的模型一致。而SMC-5/6在BRC-1的下游起作用以调节重组中间体的形成或分解。一起来看,我们的研究阐明了BRC-1和SMC-5/6在种系中调节DSB修复结果的协调相互作用.
    The preservation of genome integrity during sperm and egg development is vital for reproductive success. During meiosis, the tumor suppressor BRCA1/BRC-1 and structural maintenance of chromosomes 5/6 (SMC-5/6) complex genetically interact to promote high fidelity DNA double strand break (DSB) repair, but the specific DSB repair outcomes these proteins regulate remain unknown. Using genetic and cytological methods to monitor resolution of DSBs with different repair partners in Caenorhabditis elegans, we demonstrate that both BRC-1 and SMC-5 repress intersister crossover recombination events. Sequencing analysis of conversion tracts from homolog-independent DSB repair events further indicates that BRC-1 regulates intersister/intrachromatid noncrossover conversion tract length. Moreover, we find that BRC-1 specifically inhibits error prone repair of DSBs induced at mid-pachytene. Finally, we reveal functional interactions of BRC-1 and SMC-5/6 in regulating repair pathway engagement: BRC-1 is required for localization of recombinase proteins to DSBs in smc-5 mutants and enhances DSB repair defects in smc-5 mutants by repressing theta-mediated end joining (TMEJ). These results are consistent with a model in which some functions of BRC-1 act upstream of SMC-5/6 to promote recombination and inhibit error-prone DSB repair, while SMC-5/6 acts downstream of BRC-1 to regulate the formation or resolution of recombination intermediates. Taken together, our study illuminates the coordinated interplay of BRC-1 and SMC-5/6 to regulate DSB repair outcomes in the germline.
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  • 文章类型: Journal Article
    基于相当大的兴趣,扩大了用氦离子辐照后抗辐射细胞的实验数据库,将HTB140、MCF-7和HTB177人类恶性细胞暴露于具有不同线性能量转移(LET)的氦离子束。
    沿加宽的62MeV/u氦离子布拉格峰照射细胞,提供4.9、9.8、23.4和36.8keV/µm的LET。使用Geant4工具包进行数值模拟用于实验设计。评估细胞存活并与参考γ-射线比较。通过γ-H2AX灶评估DNA双链断裂。
    随着LET的增加,2Gy时的存活分数减少,而RBE(2Gy,γ)逐渐增加。对于HTB140细胞,超过4Gy的剂量,在RBE增加(2Gy,γ)不受影响。随着LET的增加,γ-H2AX灶在辐照后0.5h增加。对于相同的LET,细胞系之间的病灶数目没有显著差异。从0.5到24小时,焦点的数量下降达到其残余水平。对于每个时间点,三种细胞系之间的DNADSB差异很小。
    分析氦离子辐照的三种细胞系的数据,有不同的LET,揭示了相对于γ射线的高消除能力和大量DNADSB的产生,介于质子和碳离子的报道之间。
    UNASSIGNED: Based on considerable interest to enlarge the experimental database of radioresistant cells after their irradiation with helium ions, HTB140, MCF-7 and HTB177 human malignant cells are exposed to helium ion beams having different linear energy transfer (LET).
    UNASSIGNED: The cells are irradiated along the widened 62 MeV/u helium ion Bragg peak, providing LET of 4.9, 9.8, 23.4 and 36.8 keV/µm. Numerical simulations with the Geant4 toolkit are used for the experimental design. Cell survival is evaluated and compared with reference γ-rays. DNA double strand breaks are assessed via γ-H2AX foci.
    UNASSIGNED: With the increase of LET, surviving fractions at 2 Gy decrease, while RBE (2 Gy, γ) gradually increase. For HTB140 cells, above the dose of 4 Gy, a slight saturation of survival is observed while the increase of RBE (2 Gy, γ) remains unaffected. With the increase of LET the increase of γ-H2AX foci is revealed at 0.5 h after irradiation. There is no significant difference in the number of foci between the cell lines for the same LET. From 0.5 to 24 h, the number of foci drops reaching its residual level. For each time point, there are small differences in DNA DSB among the three cell lines.
    UNASSIGNED: Analyses of data acquired for the three cell lines irradiated by helium ions, having different LET, reveal high elimination capacity and creation of a large number of DNA DSB with respect to γ-rays, and are between those reported for protons and carbon ions.
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  • 文章类型: Letter
    暂无摘要。
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  • 文章类型: Journal Article
    植物积累类黄酮作为UV-B适应的一部分,而高水平的UV-B照射会诱导DNA损伤并导致基因组不稳定。这里,我们表明,MYB4是MYB转录因子的R2R3亚家族的成员,通过直接抑制类黄酮生物合成和DNA双链断裂(DSBs)修复的关键基因,在调节植物对UV-B暴露的反应中起重要作用。我们的结果表明,MYB4在UV-B暴露后抑制拟南芥的种子萌发和幼苗建立。atmyb4-1单突变体系以及uvr8-6/atmyb4-1,cop1-6/atmyb4-1和hy5-215/atmyb4-1双突变体的表型分析表明,MYB4在UVR8介导的信号通路下游起作用,并对UV-B适应和子叶扩展产生负面影响。我们的结果表明,MYB4作为两个关键的类黄酮生物合成基因的转录抑制因子,包括4CL和FLS,通过直接结合它们的启动子,从而减少类黄酮的积累。另一方面,AtMYB4过表达导致更高的DSB积累水平以及几个关键DSB修复基因的表达被抑制。包括AtATM,分别为AtKU70、AtLIG4、AtXRCC4、AtBRCA1、AtSOG1、AtRAD51和AtRAD54。我们的结果进一步表明,MYB4蛋白抑制了两个关键的DSB修复基因的表达,AtKU70和AtXRCC4通过与其启动子直接结合。一起,我们的结果表明,MYB4是调节植物对UV-B反应的重要协调因子,通过转录调节黄酮类化合物生物合成和修复UV-B诱导的DNA损伤的关键基因。
    Plants accumulate flavonoids as part of UV-B acclimation, while a high level of UV-B irradiation induces DNA damage and leads to genome instability. Here, we show that MYB4, a member of the R2R3-subfamily of MYB transcription factor plays important role in regulating plant response to UV-B exposure through the direct repression of the key genes involved in flavonoids biosynthesis and repair of DNA double-strand breaks (DSBs). Our results demonstrate that MYB4 inhibits seed germination and seedling establishment in Arabidopsis following UV-B exposure. Phenotype analyses of atmyb4-1 single mutant line along with uvr8-6/atmyb4-1, cop1-6/atmyb4-1, and hy5-215/atmyb4-1 double mutants indicate that MYB4 functions downstream of UVR8 mediated signaling pathway and negatively affects UV-B acclimation and cotyledon expansion. Our results indicate that MYB4 acts as transcriptional repressor of two key flavonoid biosynthesis genes, including 4CL and FLS, via directly binding to their promoter, thus reducing flavonoid accumulation. On the other hand, AtMYB4 overexpression leads to higher accumulation level of DSBs along with repressed expression of several key DSB repair genes, including AtATM, AtKU70, AtLIG4, AtXRCC4, AtBRCA1, AtSOG1, AtRAD51, and AtRAD54, respectively. Our results further suggest that MYB4 protein represses the expression of two crucial DSB repair genes, AtKU70 and AtXRCC4 through direct binding with their promoters. Together, our results indicate that MYB4 functions as an important coordinator to regulate plant response to UV-B through transcriptional regulation of key genes involved in flavonoids biosynthesis and repair of UV-B induced DNA damage.
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  • 文章类型: Journal Article
    顺铂(CDDP)是卵巢癌标准治疗的基石。然而,卵巢癌细胞对CDDP的耐药性导致不可避免的复发。克服CDDP耐药性的策略之一是CDDP和依托泊苷(VP-16)联合治疗卵巢癌,虽然这种策略并不总是有效的。本文提出了一种使CDDP耐药的人卵巢癌细胞对CDDP和VP-16联合治疗敏感的新方法。为了复制癌症的肿瘤状况,我们在缺氧条件下进行了分析.由于CDDP和VP-16诱导DNA双链断裂(DSB),我们将DSB修复抑制剂引入治疗方案。我们使用了新的HRR和NHEJ抑制剂:YU238259抑制HRR途径,DDRI-18和A12B4C3作为NHEJ抑制剂。所有抑制剂都增强了CDDP/VP-16治疗方案的治疗效果,并降低了CDDP/VP16的有效剂量。抑制HRR或NHEJ降低存活率和增加DNA损伤水平,增加了γ-H2AX灶的数量,用CDDP/VP16处理后,细胞凋亡分数增加。此外,在HRR或NHEJ抑制的细胞中检测到DSB的延迟修复。这种有利的结果在缺氧下发生了改变,与有氧条件相比,在低氧条件下培养的细胞中转录组的转录组水平上的交替。这些变化表明,在缺氧期间,癌细胞中可能激活了经典的DSB修复系统。我们的研究表明,DSB抑制剂的引入可能会提高常用卵巢癌治疗的有效性,和HRR,以及NHEJ,是克服卵巢癌细胞对CDDP抗性的有吸引力的治疗靶标。然而,在我们的治疗方案中,观察到低氧介导的反应减少.
    Cisplatin (CDDP) is the cornerstone of standard treatment for ovarian cancer. However, the resistance of ovarian cancer cells to CDDP leads to an inevitable recurrence. One of the strategies to overcome resistance to CDDP is the combined treatment of ovarian cancer with CDDP and etoposide (VP-16), although this strategy is not always effective. This article presents a new approach to sensitize CDDP-resistant human ovarian carcinoma cells to combined treatment with CDDP and VP-16. To replicate the tumor conditions of cancers, we performed analysis under hypoxia conditions. Since CDDP and VP-16 induce DNA double-strand breaks (DSB), we introduce DSB repair inhibitors to the treatment scheme. We used novel HRR and NHEJ inhibitors: YU238259 inhibits the HRR pathway, and DDRI-18 and A12B4C3 act as NHEJ inhibitors. All inhibitors enhanced the therapeutic effect of the CDDP/VP-16 treatment scheme and allowed a decrease in the effective dose of CDDP/VP16. Inhibition of HRR or NHEJ decreased survival and increased DNA damage level, increased the amount of γ-H2AX foci, and caused an increase in apoptotic fraction after treatment with CDDP/VP16. Furthermore, delayed repair of DSBs was detected in HRR- or NHEJ-inhibited cells. This favorable outcome was altered under hypoxia, during which alternation at the transcriptome level of the transcriptome in cells cultured under hypoxia compared to aerobic conditions. These changes suggest that it is likely that other than classical DSB repair systems are activated in cancer cells during hypoxia. Our study suggests that the introduction of DSB inhibitors may improve the effectiveness of commonly used ovarian cancer treatment, and HRR, as well as NHEJ, is an attractive therapeutic target for overcoming the resistance to CDDP resistance of ovarian cancer cells. However, a hypoxia-mediated decrease in response to our scheme of treatment was observed.
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  • 文章类型: Journal Article
    背景:在真核细胞中,DNA双链断裂(DSB)主要通过规范的非同源末端连接(c-NHEJ)修复,同源重组(HR)和选择性NHEJ(alt-NHEJ)。锌指和SCAN结构域含有4(ZSCAN4),在1-5%小鼠胚胎干细胞(mESCs)中偶尔表达,已知通过促进HR来调节基因组稳定性。
    结果:在这里,我们显示ZSCAN4通过与聚(ADP-核糖)聚合酶1(PARP1)作用来促进DNA修复,它是alt-NHEJ途径的关键成员。在PARP1的存在下,与ZSCAN4阴性的相比,表达ZSCAN4的mESC与较低程度的内源性或化学诱导的DSB相关。与ZSCAN4相关的减少的DSB被PARP1抑制消除,在mESCs中通过小分子抑制剂或基因敲除实现。此外,PARP1直接与ZSCAN4结合,ZSCAN4的第二个螺旋和第四个锌指基序对这种结合至关重要。
    结论:这些数据表明PARP1和ZSCAN4具有蛋白质-蛋白质相互作用,并阐明了ZSCAN4减少mESC中DSB的分子机制。
    BACKGROUND: In eukaryotic cells, DNA double strand breaks (DSB) are primarily repaired by canonical non-homologous end joining (c-NHEJ), homologous recombination (HR) and alternative NHEJ (alt-NHEJ). Zinc finger and SCAN domain containing 4 (ZSCAN4), sporadically expressed in 1-5% mouse embryonic stem cells (mESCs), is known to regulate genome stability by promoting HR.
    RESULTS: Here we show that ZSCAN4 promotes DNA repair by acting with Poly (ADP-ribose) polymerase 1 (PARP1), which is a key member of the alt-NHEJ pathway. In the presence of PARP1, ZSCAN4-expressing mESCs are associated with lower extent of endogenous or chemical induced DSB comparing to ZSCAN4-negative ones. Reduced DSBs associated with ZSCAN4 are abolished by PARP1 inhibition, achieved either through small molecule inhibitor or gene knockout in mESCs. Furthermore, PARP1 binds directly to ZSCAN4, and the second ⍺-helix and the fourth zinc finger motif of ZSCAN4 are critical for this binding.
    CONCLUSIONS: These data reveal that PARP1 and ZSCAN4 have a protein-protein interaction, and shed light on the molecular mechanisms by which ZSCAN4 reduces DSB in mESCs.
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  • 文章类型: Journal Article
    六价铬[Cr(VI)]是一种人体肺部致癌物,具有广泛的暴露风险。Cr(VI)导致DNA双链断裂,如果不修复,进展为染色体不稳定(CIN),Cr(VI)诱导的肿瘤的关键驱动结果。Cr(VI)引起DNA断裂和抑制修复的能力在人肺上皮细胞中知之甚少,这是非常相关的,因为病理学数据显示Cr(VI)诱导的肿瘤起源于支气管上皮细胞。在本研究中,我们考虑了永生化和原代人支气管上皮细胞。用浓度为0.05至0.4μg/cm2的铬酸锌处理细胞,以进行急性(24小时)和长时间(120小时)的暴露。用中性彗星试验测定DNA双链断裂(DSBs)和同源重组修复状态,修复Cr(VI)诱导的DSB的主要途径,用免疫荧光法通过RAD51病灶形成来测量,共焦显微镜和姐妹染色单体交换的RAD51定位。我们发现急性和长时间的Cr(VI)暴露会引起DSB。急性暴露诱导同源重组修复,但是长时间的暴露会抑制它,从而导致永生化和原代人支气管上皮细胞的染色体不稳定。
    Hexavalent chromium [Cr(VI)] is a human lung carcinogen with widespread exposure risks. Cr(VI) causes DNA double strand breaks that if unrepaired, progress into chromosomal instability (CIN), a key driving outcome in Cr(VI)-induced tumors. The ability of Cr(VI) to cause DNA breaks and inhibit repair is poorly understood in human lung epithelial cells, which are extremely relevant since pathology data show Cr(VI)-induced tumors originate from bronchial epithelial cells. In the present study, we considered immortalized and primary human bronchial epithelial cells. Cells were treated with zinc chromate at concentrations ranging 0.05 to 0.4μg/cm2 for acute (24 h) and prolonged (120 h) exposures. DNA double strand breaks (DSBs) were measured by neutral comet assay and the status of homologous recombination repair, the main pathway to fix Cr(VI)-induced DSBs, was measured by RAD51 foci formation with immunofluorescence, RAD51 localization with confocal microscopy and sister chromatid exchanges. We found acute and prolonged Cr(VI) exposure induced DSBs. Acute exposure induced homologous recombination repair, but prolonged exposure inhibited it resulting in chromosome instability in immortalized and primary human bronchial epithelial cells.
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  • 文章类型: Journal Article
    家用化学产品通常通过摄入和吸入进行毒性评估,对皮肤吸收的信息有限。此外,目前的研究集中在这些家用化学产品中含有的有害物质的长期毒性作用,然而,人们对它们的急性毒性作用知之甚少。在这项研究中,1,2,4-三羟基苯(THB)在人角质形成细胞中的作用,通过检查其对应激颗粒(SG)形成的影响,急性应激反应的标志,和重复暴露引起的DNA双链断裂。THB通过内质网应激介导的eIF2α磷酸化在角质形成细胞中有效诱导SG形成。此外,反复暴露于THB会导致严重的DNA双链断裂导致细胞凋亡。总的来说,THB暴露会导致皮肤毒性,建议使用含THB的家用化学产品的预防措施。
    Household chemical products are typically evaluated for toxicity through ingestion and inhalation, with limited information on skin absorption. Furthermore, current research focuses on the long-term toxic effects of harmful substances contained in these household chemical products, however not much is known about their acute toxic effects. In this study, the effects of 1,2,4-trihydroxybenzene (THB) in human keratinocytes by examining its effects on stress granule (SG) formation, a marker of acute stress response, and DNA double strand breaks caused by repeated exposure. THB effectively induced SG formation via endoplasmic reticulum stress-mediated eIF2α phosphorylation in keratinocytes. Furthermore, repeated exposure to THB causes apoptotic cell death due to DNA double strand breaks. Collectively, THB exposure leads to skin toxicity, suggesting precautions for the use of THB-containing household chemical products.
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  • 文章类型: Journal Article
    在文献中,辐射后24小时及以后观察到的DNA修复(DNA损伤)病灶称为“残留”。他们被认为是复杂的维修地点,可能致命的DNA双链断裂。然而,其辐射后剂量依赖性数量变化的特征及其在细胞死亡和衰老过程中的作用仍未得到充分研究。第一次在一个作品中,同时研究关键DNA损伤反应(DDR)蛋白(γH2AX,pATM,53BP1,p-p53),caspase-3阳性的比例,LC-3II自噬和SA-β-gal衰老细胞在成纤维细胞以1-10Gy的剂量照射后24-72小时进行。结果表明,随着辐照后时间从24h增加到72h,残留灶的数量和caspase-3阳性细胞的比例减少,而衰老细胞的比例,相反,增加。辐射后48小时,自噬细胞数量最高。总的来说,获得的结果为了解受照射的成纤维细胞群体中剂量依赖性细胞反应发展的动力学提供了重要信息.
    DNA repair (DNA damage) foci observed 24 h and later after irradiation are called \"residual\" in the literature. They are believed to be the repair sites for complex, potentially lethal DNA double strand breaks. However, the features of their post-radiation dose-dependent quantitative changes and their role in the processes of cell death and senescence are still insufficiently studied. For the first time in one work, a simultaneous study of the association of changes in the number of residual foci of key DNA damage response (DDR) proteins (γH2AX, pATM, 53BP1, p-p53), the proportion of caspase-3 positive, LC-3 II autophagic and SA-β-gal senescent cells was carried out 24-72 h after fibroblast irradiation with X-rays at doses of 1-10 Gy. It was shown that with an increase in time after irradiation from 24 h to 72 h, the number of residual foci and the proportion of caspase-3 positive cells decrease, while the proportion of senescent cells, on the contrary, increases. The highest number of autophagic cells was noted 48 h after irradiation. In general, the results obtained provide important information for understanding the dynamics of the development of a dose-dependent cellular response in populations of irradiated fibroblasts.
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