DL

巴尔得-别德尔综合征
  • 文章类型: Journal Article
    糖尿病性视网膜病变(DR)是全球视觉障碍的主要原因。它是由于长期糖尿病和血糖水平波动而发生的。它已经成为工作年龄组的人们的一个重要问题,因为它可能导致未来的视力丧失。眼底图像的手动检查是耗时的并且需要大量的努力和专业知识来确定视网膜病变的严重程度。诊断和评估疾病,基于深度学习的技术已经被使用,分析血管,微动脉瘤,分泌物,黄斑,光盘,和出血也用于DR的初始检测和分级。这项研究检查了糖尿病的基本原理,其患病率,并发症,以及使用机器学习(ML)等人工智能方法的治疗策略,深度学习(DL),和联邦学习(FL)。这项研究涵盖了未来的研究,绩效评估,生物标志物,筛选方法,和当前数据集。各种神经网络设计,包括递归神经网络(RNN),生成对抗网络(GAN),以及ML的应用,DL,和FL在眼底图像处理中,例如卷积神经网络(CNN)及其变体,彻底检查。潜在的研究方法,例如开发DL模型和合并异构数据源,也概述了。最后,讨论了本研究面临的挑战和未来的发展方向。
    Diabetic retinopathy (DR) is the leading cause of visual impairment globally. It occurs due to long-term diabetes with fluctuating blood glucose levels. It has become a significant concern for people in the working age group as it can lead to vision loss in the future. Manual examination of fundus images is time-consuming and requires much effort and expertise to determine the severity of the retinopathy. To diagnose and evaluate the disease, deep learning-based technologies have been used, which analyze blood vessels, microaneurysms, exudates, macula, optic discs, and hemorrhages also used for initial detection and grading of DR. This study examines the fundamentals of diabetes, its prevalence, complications, and treatment strategies that use artificial intelligence methods such as machine learning (ML), deep learning (DL), and federated learning (FL). The research covers future studies, performance assessments, biomarkers, screening methods, and current datasets. Various neural network designs, including recurrent neural networks (RNNs), generative adversarial networks (GANs), and applications of ML, DL, and FL in the processing of fundus images, such as convolutional neural networks (CNNs) and their variations, are thoroughly examined. The potential research methods, such as developing DL models and incorporating heterogeneous data sources, are also outlined. Finally, the challenges and future directions of this research are discussed.
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  • 文章类型: Journal Article
    自然图像的检测,比如冰川和山脉,在交通自动化和户外活动中具有实际应用。卷积神经网络(CNN)已广泛用于图像识别和分类任务。虽然以前的研究集中在水果上,土地滑动,和医学图像,有必要对自然图像的检测进行进一步的研究,尤其是冰川和山脉。为了解决传统CNN的局限性,例如消失的梯度和对许多层的需要,这项拟议的工作引入了一个名为DenseHillNet的新模型。该模型利用DenseHillNet架构,一种具有密集连接层的CNN,准确地将图像分类为冰川或山脉。该模型有助于运输和户外活动中自动化技术的发展。本研究中使用的数据集包括“冰川”和“山”类别中每个类别的3,096张图像。采用严格的方法进行数据集准备和模型训练,确保结果的有效性。与先前工作的比较表明,提出的DenseHillNet模型,接受过冰川和山脉图像的训练,与仅利用冰川图像的CNN模型(72%)相比,实现了更高的准确度(86%)。研究人员和研究生是我们文章的受众。
    The detection of natural images, such as glaciers and mountains, holds practical applications in transportation automation and outdoor activities. Convolutional neural networks (CNNs) have been widely employed for image recognition and classification tasks. While previous studies have focused on fruits, land sliding, and medical images, there is a need for further research on the detection of natural images, particularly glaciers and mountains. To address the limitations of traditional CNNs, such as vanishing gradients and the need for many layers, the proposed work introduces a novel model called DenseHillNet. The model utilizes a DenseHillNet architecture, a type of CNN with densely connected layers, to accurately classify images as glaciers or mountains. The model contributes to the development of automation technologies in transportation and outdoor activities. The dataset used in this study comprises 3,096 images of each of the \"glacier\" and \"mountain\" categories. Rigorous methodology was employed for dataset preparation and model training, ensuring the validity of the results. A comparison with a previous work revealed that the proposed DenseHillNet model, trained on both glacier and mountain images, achieved higher accuracy (86%) compared to a CNN model that only utilized glacier images (72%). Researchers and graduate students are the audience of our article.
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  • 文章类型: Journal Article
    深度学习(DL)的广泛应用,推动了智能故障诊断的发展,带来显著的性能改进。然而,现有的方法大多不能捕获机械设备的时间信息和全局特征来收集足够的故障信息,导致性能崩溃。同时,由于复杂和恶劣的操作环境,单源故障诊断方法难以稳定、广泛地提取故障特征。因此,本文提出了一种新颖的分层视觉变换器(NHVT)和小波时频体系结构,并结合了多源信息融合(MSIF)策略,以通过提取和集成丰富的特征来提高稳定性能。目标是提高机械部件的端到端故障诊断性能。首先,将多源信号转换为二维时间和频率图。然后,引入了一种新颖的分层视觉变换器来改进特征图的非线性表示,以丰富故障特征。接下来,多源信息图融合到拟议的NHVT中,以产生更全面的演示。最后,我们使用两个不同的多源数据集来验证所提出的NHVT的优越性.然后,NHVT在机械部件的多源数据集上优于最先进的方法(SOTA),实验结果表明,该方法能够从多源信息中提取出有用的特征。
    Deep learning (DL) has been widely used to promote the development of intelligent fault diagnosis, bringing significant performance improvement. However, most of the existing methods cannot capture the temporal information and global features of mechanical equipment to collect sufficient fault information, resulting in performance collapse. Meanwhile, due to the complex and harsh operating environment, it is difficult to extract fault features stably and extensively using single-source fault diagnosis methods. Therefore, a novel hierarchical vision transformer (NHVT) and wavelet time-frequency architecture combined with a multi-source information fusion (MSIF) strategy has been suggested in this paper to boost stable performance by extracting and integrating rich features. The goal is to improve the end-to-end fault diagnosis performance of mechanical components. First, multi-source signals are transformed into two-dimensional time and frequency diagrams. Then, a novel hierarchical vision transformer is introduced to improve the nonlinear representation of feature maps to enrich fault features. Next, multi-source information diagrams are fused into the proposed NHVT to produce more comprehensive presentations. Finally, we employed two different multi-source datasets to verify the superiority of the proposed NHVT. Then, NHVT outperformed the state-of-the-art approach (SOTA) on the multi-source dataset of mechanical components, and the experimental results show that it is able to extract useful features from multi-source information.
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  • 文章类型: Journal Article
    背景:癌症患者经常经历与癌症及其治疗相关的严重和令人痛苦的症状。预测癌症患者的症状仍然是临床医生和研究人员面临的重大挑战。机器学习(ML)的快速发展凸显了对当前系统评价以改善癌症症状预测的必要性。
    目的:本系统综述旨在综合使用ML算法预测癌症症状发展的文献,并确定这些症状的预测因子。这对于整合新的发展和确定现有文献中的差距至关重要。
    方法:我们根据PRISMA(系统评价和荟萃分析的首选报告项目)核对表进行了系统评价。我们对CINAHL进行了系统的搜索,Embase,和PubMed,用于1984年至2023年8月11日发布的英语记录,使用以下搜索词:癌症,肿瘤,具体症状,神经网络,机器学习,特定的算法名称,和深度学习。所有符合资格标准的记录由2位共同作者单独审查,并提取和合成了关键发现。我们专注于使用ML算法预测癌症症状的研究,不包括非人类研究,技术报告,reviews,书籍章节,会议记录,和无法访问的全文。
    结果:共纳入42项研究,其中大部分是在2017年之后发布的。大多数研究在北美(18/42,43%)和亚洲(16/42,38%)进行。大多数研究(27/42,64%)的样本量通常在100至1000名参与者之间。最流行的算法类别是监督ML,占42项研究中的39项(93%)。每一种方法——深度学习,集成分类器,在42项研究中,无监督的ML构成了3项(3%)。性能最好的ML算法是逻辑回归(9/42,17%),随机森林(7/42,13%),人工神经网络(5/42,9%),和决策树(5/42,9%)。最常见的原发癌部位是头颈部(9/42,22%)和乳腺(8/42,19%),42项研究中有17项(41%)未指定该地点。最常见的症状是口干症(9/42,14%),抑郁症(8/42,13%),疼痛(8/42,13%),和疲劳(6/42,10%)。重要的预测因素是年龄,性别,治疗类型,治疗编号,癌症部位,癌症阶段,化疗,放射治疗,慢性疾病,合并症,物理因素,和心理因素。
    结论:这篇综述概述了用于预测癌症患者症状的算法。鉴于癌症患者症状的多样性,可以处理复杂和非线性关系的分析方法是至关重要的。这些知识可以为制定针对特定症状的算法铺平道路。此外,为了提高预测精度,未来的研究应该将深度学习和集成方法等前沿机器学习策略与传统的统计模型进行比较。
    BACKGROUND: People with cancer frequently experience severe and distressing symptoms associated with cancer and its treatments. Predicting symptoms in patients with cancer continues to be a significant challenge for both clinicians and researchers. The rapid evolution of machine learning (ML) highlights the need for a current systematic review to improve cancer symptom prediction.
    OBJECTIVE: This systematic review aims to synthesize the literature that has used ML algorithms to predict the development of cancer symptoms and to identify the predictors of these symptoms. This is essential for integrating new developments and identifying gaps in existing literature.
    METHODS: We conducted this systematic review in accordance with the PRISMA (Preferred Reporting Items for Systematic Reviews and Meta-Analyses) checklist. We conducted a systematic search of CINAHL, Embase, and PubMed for English records published from 1984 to August 11, 2023, using the following search terms: cancer, neoplasm, specific symptoms, neural networks, machine learning, specific algorithm names, and deep learning. All records that met the eligibility criteria were individually reviewed by 2 coauthors, and key findings were extracted and synthesized. We focused on studies using ML algorithms to predict cancer symptoms, excluding nonhuman research, technical reports, reviews, book chapters, conference proceedings, and inaccessible full texts.
    RESULTS: A total of 42 studies were included, the majority of which were published after 2017. Most studies were conducted in North America (18/42, 43%) and Asia (16/42, 38%). The sample sizes in most studies (27/42, 64%) typically ranged from 100 to 1000 participants. The most prevalent category of algorithms was supervised ML, accounting for 39 (93%) of the 42 studies. Each of the methods-deep learning, ensemble classifiers, and unsupervised ML-constituted 3 (3%) of the 42 studies. The ML algorithms with the best performance were logistic regression (9/42, 17%), random forest (7/42, 13%), artificial neural networks (5/42, 9%), and decision trees (5/42, 9%). The most commonly included primary cancer sites were the head and neck (9/42, 22%) and breast (8/42, 19%), with 17 (41%) of the 42 studies not specifying the site. The most frequently studied symptoms were xerostomia (9/42, 14%), depression (8/42, 13%), pain (8/42, 13%), and fatigue (6/42, 10%). The significant predictors were age, gender, treatment type, treatment number, cancer site, cancer stage, chemotherapy, radiotherapy, chronic diseases, comorbidities, physical factors, and psychological factors.
    CONCLUSIONS: This review outlines the algorithms used for predicting symptoms in individuals with cancer. Given the diversity of symptoms people with cancer experience, analytic approaches that can handle complex and nonlinear relationships are critical. This knowledge can pave the way for crafting algorithms tailored to a specific symptom. In addition, to improve prediction precision, future research should compare cutting-edge ML strategies such as deep learning and ensemble methods with traditional statistical models.
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  • 文章类型: Journal Article
    本文探讨微创手术在创伤中的作用,特别是腹腔镜和电视胸腔镜手术(VATS)。它讨论了腹腔镜手术优于传统剖腹手术的好处,包括其在检测腹膜侵犯和由穿透性创伤引起的腹膜内损伤方面的准确性。本文还探讨了腹腔镜检查作为腹部损伤非手术治疗的辅助手段以及腹部损伤不清的钝性创伤的辅助手段。此外,它强调了胸腔镜在诊断和治疗胸部损伤方面的好处,比如创伤性膈肌损伤,保留的血肿,和持续性气胸。
    This article delves into the role of minimally invasive surgeries in trauma, specifically laparoscopy and video-assisted thoracic surgery (VATS). It discusses the benefits of laparoscopy over traditional laparotomy, including its accuracy in detecting peritoneal violation and intraperitoneal injuries caused by penetrating trauma. The article also explores the use of laparoscopy as an adjunct to nonoperative management of abdominal injuries and in cases of blunt trauma with unclear abdominal injuries. Furthermore, it highlights the benefits of VATS in diagnosing and treating thoracic injuries, such as traumatic diaphragmatic injuries, retained hematomas, and persistent pneumothorax.
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  • 文章类型: Journal Article
    心律失常是心血管疾病发病率和死亡率的主要原因。便携式心电图(ECG)监测仪已经使用了数十年来监测心律失常患者。这些监测器提供心脏活动的实时数据,以识别不规则的心跳。然而,节律监测和电波检测,尤其是在12导联心电图中,这使得很难通过将ECG分析与患者的状况相关联来解释ECG分析。此外,即使是经验丰富的从业者也发现心电图分析具有挑战性。所有这些都是由于ECG读数中的噪声和噪声发生的频率。这项研究的主要目的是去除噪声和提取特征从ECG信号使用提出的无限脉冲响应(IIR)滤波器,以提高ECG的质量,非专家可以更好地理解。为此,这项研究使用了来自麻省理工学院贝丝以色列医院(MIT-BIH)数据库的ECG信号数据。这允许使用机器学习(ML)和深度学习(DL)模型轻松评估获取的数据,并将其分类为节奏。为了获得准确的结果,我们对ML分类器应用了超参数(HP)调整,对DL模型应用了微调(FT)。这项研究还检查了使用不同过滤器对心律失常的分类以及准确性的变化。因此,当评估所有模型时,没有FT的DenseNet-121实现了99%的准确度,而FT显示出更好的结果,准确率为99.97%。
    Arrhythmias are a leading cause of cardiovascular morbidity and mortality. Portable electrocardiogram (ECG) monitors have been used for decades to monitor patients with arrhythmias. These monitors provide real-time data on cardiac activity to identify irregular heartbeats. However, rhythm monitoring and wave detection, especially in the 12-lead ECG, make it difficult to interpret the ECG analysis by correlating it with the condition of the patient. Moreover, even experienced practitioners find ECG analysis challenging. All of this is due to the noise in ECG readings and the frequencies at which the noise occurs. The primary objective of this research is to remove noise and extract features from ECG signals using the proposed infinite impulse response (IIR) filter to improve ECG quality, which can be better understood by non-experts. For this purpose, this study used ECG signal data from the Massachusetts Institute of Technology Beth Israel Hospital (MIT-BIH) database. This allows the acquired data to be easily evaluated using machine learning (ML) and deep learning (DL) models and classified as rhythms. To achieve accurate results, we applied hyperparameter (HP)-tuning for ML classifiers and fine-tuning (FT) for DL models. This study also examined the categorization of arrhythmias using different filters and the changes in accuracy. As a result, when all models were evaluated, DenseNet-121 without FT achieved 99% accuracy, while FT showed better results with 99.97% accuracy.
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  • 文章类型: Journal Article
    在这项研究中,它旨在通过利用静态足底压力数据和胶囊网络(CapsNet)检测多发性硬化(MS)患者的共济失调,深度学习(DL)架构之一。CapsNet还配备了强大的动态路由机制,可确定下一个胶囊的输出。MS是一种慢性神经系统疾病,显示其在中枢神经系统中的作用,并表现为发作。MS最常见和最具挑战性的症状之一被称为共济失调。共济失调会导致肢体肌肉张力或步态障碍失去控制,导致失去平衡和协调。MS中共济失调的诊断应用标准扩展残疾状态量表(EDSS)评分。然而,由于医生误解等原因,医生之间的诊断差异,和不正确的病人信息,诊断需要更多公正的解决方案。结果包括灵敏度为96.34%±1.71,特异性为98.11%±2.04,精确度为98.08%±2.16,准确度为97.13%±0.33。该研究的主要动机是表明这些深度学习方法可以使用静态足底压力数据成功检测MS患者的共济失调。灵敏度的高性能测量,特异性,精度和准确性强调所提出的系统可以在临床实践中的有效工具。此外,结论是,拟议的自主系统将是一种支持机制,可以帮助医生检测MS患者的共济失调。
    In this study, it was aimed to detect ataxia in patients with Multiple Sclerosis (MS) by utilizing static plantar pressure data and capsule networks (CapsNet), one of the deep learning (DL) architectures. CapsNet is also equipped with a robust dynamic routing mechanism that determines the output of the next capsule. MS is a chronic nervous system disease that shows its effect in the central nervous system and manifests itself with attacks. One of the most common and challenging symptoms of MS is known as ataxia. Ataxia causes loss of control of limb muscle tone or gait disorders, leading to loss of balance and coordination. The diagnosis of ataxia in MS is applied employing the standard Expanded Disability Status Scale (EDSS) score. However, due to reasons such as physician misconception, diagnosis differences among physicians, and incorrect patient information, more unbiased solutions are required for the diagnosis. The results included Sensitivity at 96.34 % ± 1.71, Specificity at 98.11 % ± 2.04, Precision at 98.08 % ± 2.16, and Accuracy at 97.13 % ± 0.33. The main motivation of the study is to show that these deep learning methods can successfully detect ataxia in MS patients using static plantar pressure data. The high-performance measurements of sensitivity, specificity, precision and accuracy emphasize that the proposed system can be an effective tool in clinical practice. In addition, it was concluded that the proposed autonomous system would be a support mechanism to assist the physician in the detection of ataxia in patients with MS.
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  • 文章类型: Journal Article
    淀粉样蛋白转甲状腺素(ATTR)淀粉样变性是一种蛋白质错误折叠疾病,其特征是原纤维在细胞外空间中的积累,可导致局部组织破坏和器官功能障碍。心脏受累导致发病率和死亡率,心脏是ATTR淀粉样变性的主要器官。多模态心脏成像(即,超声心动图,闪烁显像,和心脏磁共振)可以准确诊断ATTR心肌病(ATTR-CM),这一点尤其重要,因为ATTR靶向治疗已经变得可用,并且可能在疾病的早期阶段发挥最大的益处.除了确定诊断,多模态心脏成像可能有助于更好地理解发病机制,预测预后,并监测治疗反应。这篇综述的目的是对当代和不断发展的心脏成像方法及其在诊断和管理ATTR-CM中的作用进行更新。Further,在ATTR-CM的背景下,对心脏成像中的人工智能如何改善未来的临床决策和患者管理进行了展望。
    Amyloid transthyretin (ATTR) amyloidosis is a protein-misfolding disease characterized by fibril accumulation in the extracellular space that can result in local tissue disruption and organ dysfunction. Cardiac involvement drives morbidity and mortality, and the heart is the major organ affected by ATTR amyloidosis. Multimodality cardiac imaging (ie, echocardiography, scintigraphy, and cardiac magnetic resonance) allows accurate diagnosis of ATTR cardiomyopathy (ATTR-CM), and this is of particular importance because ATTR-targeting therapies have become available and probably exert their greatest benefit at earlier disease stages. Apart from establishing the diagnosis, multimodality cardiac imaging may help to better understand pathogenesis, predict prognosis, and monitor treatment response. The aim of this review is to give an update on contemporary and evolving cardiac imaging methods and their role in diagnosing and managing ATTR-CM. Further, an outlook is presented on how artificial intelligence in cardiac imaging may improve future clinical decision making and patient management in the setting of ATTR-CM.
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  • 文章类型: Journal Article
    目的:未诊断或误治的肩胛骨韧带(SL)撕裂是退行性腕关节关节炎的常见原因。新开发的基于深度学习(DL)的X射线照片上SL距离的自动评估可以支持临床医生进行初始图像解释。
    方法:对预训练的DL算法在静态和动态背脉腕部X线摄影(训练数据集n=201)上进行了微调,以自动评估SL距离。之后对DL算法进行了评估(评估数据集n=364名患者,n=1604张X射线照片),并与经验丰富的人类读者的结果和关节镜检查结果相关联。
    结果:评估数据集包括根据Geissler的0-4阶段经关节镜诊断的SL功能不全(56.5%,2.5%,5.5%,7.5%,28.0%)。DL算法在背侧X射线照相术中对SL完整性的诊断准确性接近人类读者的诊断准确性(例如,区分Geissler的分期≤2与>2,敏感性为74%,特异性为78%,与77%和80%相比),相关系数为0.81(P<0.01)。
    结论:像这样的DL算法可能会成为一个有价值的工具,支持临床医生在关于SL完整性和后续分诊的X线照相术的初步决策,以便进一步管理患者。
    OBJECTIVE: Not diagnosed or mistreated scapholunate ligament (SL) tears represent a frequent cause of degenerative wrist arthritis. A newly developed deep learning (DL)-based automated assessment of the SL distance on radiographs may support clinicians in initial image interpretation.
    METHODS: A pre-trained DL algorithm was specifically fine-tuned on static and dynamic dorsopalmar wrist radiography (training data set n = 201) for the automated assessment of the SL distance. Afterwards the DL algorithm was evaluated (evaluation data set n = 364 patients with n = 1604 radiographs) and correlated with results of an experienced human reader and with arthroscopic findings.
    RESULTS: The evaluation data set comprised arthroscopically diagnosed SL insufficiency according to Geissler\'s stages 0-4 (56.5%, 2.5%, 5.5%, 7.5%, 28.0%). Diagnostic accuracy of the DL algorithm on dorsopalmar radiography regarding SL integrity was close to that of the human reader (e.g. differentiation of Geissler\'s stages ≤ 2 versus > 2 with a sensitivity of 74% and a specificity of 78% compared to 77% and 80%) with a correlation coefficient of 0.81 (P < 0.01).
    CONCLUSIONS: A DL algorithm like this might become a valuable tool supporting clinicians\' initial decision making on radiography regarding SL integrity and consequential triage for further patient management.
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  • 文章类型: Journal Article
    单细胞多组学测序技术的出现使研究人员可以利用单个细胞的多种模式并探索细胞异质性。然而,高维,离散,数据的稀疏性使得下游分析特别具有挑战性。这里,我们提出了一种称为moETM的可解释深度学习方法,以对高维单细胞多模态数据进行综合分析。moETM通过编码器中的专家产品集成多个组学数据,并采用多个线性解码器来学习多组学签名。在七个公开可用的数据集上,与六种最先进的方法相比,moETM表现出卓越的性能。通过将moETM应用于scRNA+scATAC数据,我们确定了与调节免疫基因特征的转录因子相对应的序列基序。将来自COVID-19患者的moETMtoCITE-seq数据不仅揭示了已知的免疫细胞类型特异性特征,而且还揭示了由于COVID-19导致的关键病症的复合多组学生物标志物,从而从生物学和临床角度提供了见解。
    The advent of single-cell multi-omics sequencing technology makes it possible for researchers to leverage multiple modalities for individual cells and explore cell heterogeneity. However, the high-dimensional, discrete, and sparse nature of the data make the downstream analysis particularly challenging. Here, we propose an interpretable deep learning method called moETM to perform integrative analysis of high-dimensional single-cell multimodal data. moETM integrates multiple omics data via a product-of-experts in the encoder and employs multiple linear decoders to learn the multi-omics signatures. moETM demonstrates superior performance compared with six state-of-the-art methods on seven publicly available datasets. By applying moETM to the scRNA + scATAC data, we identified sequence motifs corresponding to the transcription factors regulating immune gene signatures. Applying moETM to CITE-seq data from the COVID-19 patients revealed not only known immune cell-type-specific signatures but also composite multi-omics biomarkers of critical conditions due to COVID-19, thus providing insights from both biological and clinical perspectives.
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