DICOM, Digital Imaging and Communications in Medicine

DICOM,医学中的数字成像和通信
  • 文章类型: Journal Article
    在非霍奇金淋巴瘤(NHL)的治疗中,多种治疗选择是可用的。改善结果预测对于优化治疗至关重要。代谢活跃肿瘤体积(MATV)已被证明是NHL的预后因素。通常使用基于标准化摄取值(SUV)的半自动阈值方法检索,从18F-氟脱氧葡萄糖正电子发射断层扫描(18F-FDGPET)图像计算。然而,目前尚无NHL的共识方法。这项研究的目的是回顾有关所使用的不同分割方法的文献,并使用内部创建的软件工具评估选定的方法。一个软件工具,开发了MUltipleSUV阈值(MUST)分割器,通过在PET图像上放置种子点来识别肿瘤位置,其次是随后的地区增长。在文献综述的基础上,选择了9种SUV阈值方法并提取了MATV。在68例NHL患者的队列中使用了MUST节段。用配对t检验评估MATV的差异,以及相关性和分布数字。在NHL患者中观察到基于不同分割方法的MATV之间的高变异性和显着差异(p<0.05)。MATV的中位数范围为35至211cc。根据文献没有确定MATV的共识。使用MUST分割器和9种选定的SUV阈值方法,我们证明了MATV的巨大和显着的变化。确定NHL患者的最佳分割方法对于进一步改善毒性预测至关重要,回应,和治疗结果,这可以由MUST-Segmenter促进。
    In the treatment of Non-Hodgkin lymphoma (NHL), multiple therapeutic options are available. Improving outcome predictions are essential to optimize treatment. The metabolic active tumor volume (MATV) has shown to be a prognostic factor in NHL. It is usually retrieved using semi-automated thresholding methods based on standardized uptake values (SUV), calculated from 18F-Fluorodeoxyglucose Positron Emission Tomography (18F-FDG PET) images. However, there is currently no consensus method for NHL. The aim of this study was to review literature on different segmentation methods used, and to evaluate selected methods by using an in house created software tool. A software tool, MUltiple SUV Threshold (MUST)-segmenter was developed where tumor locations are identified by placing seed-points on the PET images, followed by subsequent region growing. Based on a literature review, 9 SUV thresholding methods were selected and MATVs were extracted. The MUST-segmenter was utilized in a cohort of 68 patients with NHL. Differences in MATVs were assessed with paired t-tests, and correlations and distributions figures. High variability and significant differences between the MATVs based on different segmentation methods (p < 0.05) were observed in the NHL patients. Median MATVs ranged from 35 to 211 cc. No consensus for determining MATV is available based on the literature. Using the MUST-segmenter with 9 selected SUV thresholding methods, we demonstrated a large and significant variation in MATVs. Identifying the most optimal segmentation method for patients with NHL is essential to further improve predictions of toxicity, response, and treatment outcomes, which can be facilitated by the MUST-segmenter.
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  • 文章类型: Journal Article
    UNASSIGNED:与双能CT(DECT)材料分解相比,评估放射学特征对腹部淋巴结转移的客观分层的潜力。
    未经评估:在这项回顾性研究中,我们纳入了81名患者(m,57岁;平均年龄,65(四分位数间距,58.7-73.3)年),淋巴结转移(n=36)或良性淋巴结(n=45)在2015年06月至2019年07月之间接受了对比增强腹部DECT。所有恶性淋巴结根据RECIST标准明确分类,并通过组织病理学证实。PET-CT或随访影像。三名研究人员分割淋巴结以提取DECT和影像组学特征。应用类内相关分析对稳健特征子集进行分层,并通过Pearson相关分析和LASSO进一步减少特征。独立的训练和测试数据集应用于四种不同的机器学习模型。我们计算了性能指标和基于置换的特征重要性值,以增加模型的可解释性。DeLong检验用于比较表现最好的模型。
    UNASSIGNED:距离矩阵和t-SNE图与仅DECT特征相比,使用DECT和影像组学特征的组合显示出更清晰的聚类。LASSO的特征减少排除了组合特征队列的所有DECT特征。表现最好的放射学特征模型(AUC=1.000;F1=1.000;精度=1.000;随机森林)显著优于表现最好的DECT特征模型(AUC=0.942;F1=0.762;精度=0.800;随机梯度提升)(DeLong<0.001)。
    UNASSIGNED:成像生物标志物有可能对明确的淋巴结转移进行分层。影像组学模型优于DECT材料分解,可以作为支持工具来促进腹部淋巴结转移的分层。
    UNASSIGNED: To assess the potential of radiomic features in comparison to dual-energy CT (DECT) material decomposition to objectively stratify abdominal lymph node metastases.
    UNASSIGNED: In this retrospective study, we included 81 patients (m, 57; median age, 65 (interquartile range, 58.7-73.3) years) with either lymph node metastases (n = 36) or benign lymph nodes (n = 45) who underwent contrast-enhanced abdominal DECT between 06/2015-07/2019. All malignant lymph nodes were classified as unequivocal according to RECIST criteria and confirmed by histopathology, PET-CT or follow-up imaging. Three investigators segmented lymph nodes to extract DECT and radiomics features. Intra-class correlation analysis was applied to stratify a robust feature subset with further feature reduction by Pearson correlation analysis and LASSO. Independent training and testing datasets were applied on four different machine learning models. We calculated the performance metrics and permutation-based feature importance values to increase interpretability of the models. DeLong test was used to compare the top performing models.
    UNASSIGNED: Distance matrices and t-SNE plots revealed clearer clusters using a combination of DECT and radiomic features compared to DECT features only. Feature reduction by LASSO excluded all DECT features of the combined feature cohort. The top performing radiomic features model (AUC = 1.000; F1 = 1.000; precision = 1.000; Random Forest) was significantly superior to the top performing DECT features model (AUC = 0.942; F1 = 0.762; precision = 0.800; Stochastic Gradient Boosting) (DeLong < 0.001).
    UNASSIGNED: Imaging biomarkers have the potential to stratify unequivocal lymph node metastases. Radiomics models were superior to DECT material decomposition and may serve as a support tool to facilitate stratification of abdominal lymph node metastases.
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  • 文章类型: Journal Article
    将成像转换为三维(3D)打印的患者特定体模(3DPSP)可以帮助可视化复杂的心血管解剖结构并实现治疗的定制。本文的目的是回顾幻影制作的整个过程,包括成像,材料,3D打印技术,以及3DPSP的验证。使用Embase和MEDLINE对已发表的研究进行了系统回顾,包括研究3DPSP在心血管医学中的研究。在2534篇筛选论文中,212符合纳入标准,并将3DPSP描述为计划和指导干预措施的有价值的辅助手段(n=108[51%]),模拟生理或病理状况(n=19[9%]),医疗保健专业人员的教学(n=23[11%]),患者教育(n=3[1.4%]),结果预测(n=6[2.8%]),或其他目的(n=53[25%])。实现3D打印的最常见成像方式是心脏计算机断层扫描(n=131[61.8%])和心脏磁共振(n=26[12.3%])。印刷过程主要通过材料喷射(n=54[25.5%])或立体光刻(n=43[20.3%])进行。评估3DPSP几何精度的10项最大研究描述了平均偏差<±1mm;然而,研究中的验证过程非常不均匀.三维打印的患者特定体模非常准确,用于教学,并用于指导心血管治疗。在标准化验证过程之后,有必要对成像和打印方式进行系统比较,以得出心血管医学领域3DPSP的最佳生产过程的结论。
    Translation of imaging into 3-dimensional (3D) printed patient-specific phantoms (3DPSPs) can help visualize complex cardiovascular anatomy and enable tailoring of therapy. The aim of this paper is to review the entire process of phantom production, including imaging, materials, 3D printing technologies, and the validation of 3DPSPs. A systematic review of published research was conducted using Embase and MEDLINE, including studies that investigated 3DPSPs in cardiovascular medicine. Among 2,534 screened papers, 212 fulfilled inclusion criteria and described 3DPSPs as a valuable adjunct for planning and guiding interventions (n = 108 [51%]), simulation of physiological or pathological conditions (n = 19 [9%]), teaching of health care professionals (n = 23 [11%]), patient education (n = 3 [1.4%]), outcome prediction (n = 6 [2.8%]), or other purposes (n = 53 [25%]). The most common imaging modalities to enable 3D printing were cardiac computed tomography (n = 131 [61.8%]) and cardiac magnetic resonance (n = 26 [12.3%]). The printing process was conducted mostly by material jetting (n = 54 [25.5%]) or stereolithography (n = 43 [20.3%]). The 10 largest studies that evaluated the geometric accuracy of 3DPSPs described a mean bias <±1 mm; however, the validation process was very heterogeneous among the studies. Three-dimensional printed patient-specific phantoms are highly accurate, used for teaching, and applied to guide cardiovascular therapy. Systematic comparison of imaging and printing modalities following a standardized validation process is warranted to allow conclusions on the optimal production process of 3DPSPs in the field of cardiovascular medicine.
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  • 文章类型: Journal Article
    非酒精性脂肪性肝病(NAFLD)是广泛存在于人类中的慢性疾病,患病率为美国人口的30%。1,2本研究的目标是验证定量超声算法在评估疑似NAFLD患者的肝脂肪变性中的性能。
    这项前瞻性研究共招募了31名临床怀疑NAFLD的患者,通过定量超声和参考MRI测量(质子密度脂肪分数,PDFF)。分析了基于原始超声RF(射频)数据和肝脏2DB模式图像的以下超声(US)参数,随后与MRI-PDFF相关:肝肾指数,声衰减系数,Nakagami系数参数,剪切波粘度,剪切波色散和剪切波弹性。超声参数也与高血压和糖尿病的存在相关。
    患者的平均(±SD)年龄和体重指数分别为49.03(±12.49)和30.12(±6.15),分别。在上述超声参数中,肝肾指数和声学衰减系数与肝脏脂肪变性的MRI-PDFF推导有很强的相关性,r值分别为0.829和0.765。其余的US参数均未显示与PDFF的强相关性。在有和没有高血压的患者中,Nakagami参数和声学衰减系数存在显着差异。
    肝肾指数和声学衰减系数与MRI-PDFF衍生的肝性脂肪变性的测量结果密切相关。定量超声是诊断和评估NAFLD患者的有前途的工具。
    UNASSIGNED: Non-alcoholic fatty liver disease (NAFLD) is widespread chronic disease of the live in humans with the prevalence of 30% of the United States population.1,2 The goal of the study is to validate the performance of quantitative ultrasound algorithms in the assessment of hepatic steatosis in patients with suspected NAFLD.
    UNASSIGNED: This prospective study enrolled a total of 31 patients with clinical suspicion of NAFLD to receive liver fat measurements by quantitative ultrasound and reference MRI measurements (proton density fat-fraction, PDFF). The following ultrasound (US) parameters based on both raw ultrasound RF (Radio Frequency) data and 2D B-mode images of the liver were analyzed with subsequent correlation with MRI-PDFF: hepatorenal index, acoustic attenuation coefficient, Nakagami coefficient parameter, shear wave viscosity, shear wave dispersion and shear wave elasticity. Ultrasound parameters were also correlated with the presence of hypertension and diabetes.
    UNASSIGNED: The mean (± SD) age and body mass index of the patients were 49.03 (± 12.49) and 30.12 (± 6.15), respectively. Of the aforementioned ultrasound parameters, the hepatorenal index and acoustic attenuation coefficient showed a strong correlation with MRI-PDFF derivations of hepatic steatosis, with r-values of 0.829 and 0.765, respectively. None of the remaining US parameters showed strong correlations with PDFF. Significant differences in Nakagami parameters and acoustic attenuation coefficients were found in those patients with and without hypertension.
    UNASSIGNED: Hepatorenal index and acoustic attenuation coefficient correlate well with MRI-PDFF-derived measurements of hepatic steatosis. Quantitative ultrasound is a promising tool for the diagnosis and assessment of patients with NAFLD.
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  • 文章类型: Journal Article
    我们的目的是评估慢性非肝硬化肝外门静脉阻塞(CNC-EHPVO)患者的长期预后,这些患者在没有经颈静脉肝内门体分流(TIPS)插入的情况下进行了门静脉再通(PVR),并确定预测PVR失败和支架闭塞的因素。
    这项回顾性单中心研究包括在2000年至2019年间在CNC-EHPVO背景下接受PVR而未插入TIPS的所有患者。主要通畅性定义为在随访成像中没有完全的支架闭塞。
    共有31例患者接受了PVR,中位随访时间为52个月(24-82个月)。适应症为消化道出血(n=13),由CNC-EHPVO引起的腹痛(n=7),在腹部手术之前(n=4),和其他人(n=7)。27例患者获得技术成功。PVR失败与肝内门静脉延伸(p=0.005)和腹痛再通(p=0.02)相关。6例患者发生不良事件,无死亡。在PVR技术成功后,对21例患者进行了抗凝治疗。在技术成功的患者中,5年原发性通畅率为73%,与1年时肌肉质量改善(p=0.007)和脾脏体积减少(p=0.01)相关。此外,21例(78%)PVR技术成功的患者在5年内没有门脉高压并发症。
    未插入TIPS的PVR在患有CNC-EHPVO和门静脉高压症并有过去或预期并发症的部分患者中是可行且安全的。在4例PVR技术成功的患者中,有3例获得了5年的主要通畅,并且与CNC-EHPVO并发症的控制有关。PVR与1年时肌肉减少症的改善和脾脏体积的减少有关。
    患有门静脉慢性阻塞且没有肝硬化或恶性肿瘤的患者会出现与静脉系统高压相关的并发症。本研究报告了用支架治疗梗阻的患者的长期有利结果。
    UNASSIGNED: We aimed to evaluate long-term outcome of patients with chronic non-cirrhotic extrahepatic portal vein obstruction (CNC-EHPVO) who underwent portal vein recanalisation (PVR) without transjugular intrahepatic portosystemic shunt (TIPS) insertion and to determine factors predicting PVR failure and stent occlusion.
    UNASSIGNED: This retrospective monocentric study included all patients who underwent PVR without TIPS insertion in the context of CNC-EHPVO between the years 2000 and 2019. Primary patency was defined by the absence of a complete stent occlusion on follow-up imaging.
    UNASSIGNED: A total of 31 patients underwent PVR with a median follow-up of 52 months (24-82 months). Indications were gastrointestinal bleeding (n = 13), abdominal pain attributed to CNC-EHPVO (n = 7), prior to abdominal surgery (n = 4), and others (n = 7). Technical success was obtained in 27 patients. PVR failure was associated with extension within the intrahepatic portal veins (p = 0.005) and recanalisation for abdominal pain (p = 0.02). Adverse events occurred in 6 patients with no mortality. Anticoagulation was administered in 21 patients after technical success of PVR. In patients with technical success, 5-year primary patency was 73% and was associated with improved muscle mass (p = 0.007) and decreased spleen volume (p = 0.01) at 1 year. Furthermore, 21 (78%) patients with PVR technical success were free of portal hypertension complication at 5 years.
    UNASSIGNED: PVR without TIPS insertion was feasible and safe in selected patients with CNC-EHPVO and portal hypertension with past or expected complications. Primary patency at 5 years was obtained in 3 of 4 patients with technical success of PVR and was associated with a control of complications of CNC-EHPVO. PVR was associated with improvement of sarcopenia and decreased spleen volume at 1 year.
    UNASSIGNED: Patients with chronic obstruction of the portal vein and without cirrhosis or malignancy can develop complications related to the high pressure in the venous system. The present study reports long-term favourable outcome of patients in whom the obstruction was treated with stents.
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  • 文章类型: Journal Article
    肝病学的临床常规涉及广泛代谢的诊断和治疗,传染性,自身免疫和肿瘤疾病。临床医生整合来自多个数据源的定性和定量信息来做出诊断,预测病程,并建议治疗。在过去的5年里,人工智能(AI)的进步,特别是在深度学习中,使得从复杂多样的临床数据集中提取临床相关信息成为可能。特别是,组织病理学和放射学图像数据包含诊断,AI可以提取的预后和预测信息。最终,这种人工智能系统可以作为决策支持工具在临床常规中实施。然而,在肝病学的背景下,这需要进一步的大规模临床验证和监管部门的批准.在这里,我们总结了AI在肝病学中的最新技术,特别关注组织病理学和放射学数据。我们提出了进一步发展新的生物标志物在肝病学的路线图,并概述了需要克服的关键障碍。
    Clinical routine in hepatology involves the diagnosis and treatment of a wide spectrum of metabolic, infectious, autoimmune and neoplastic diseases. Clinicians integrate qualitative and quantitative information from multiple data sources to make a diagnosis, prognosticate the disease course, and recommend a treatment. In the last 5 years, advances in artificial intelligence (AI), particularly in deep learning, have made it possible to extract clinically relevant information from complex and diverse clinical datasets. In particular, histopathology and radiology image data contain diagnostic, prognostic and predictive information which AI can extract. Ultimately, such AI systems could be implemented in clinical routine as decision support tools. However, in the context of hepatology, this requires further large-scale clinical validation and regulatory approval. Herein, we summarise the state of the art in AI in hepatology with a particular focus on histopathology and radiology data. We present a roadmap for the further development of novel biomarkers in hepatology and outline critical obstacles which need to be overcome.
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  • 文章类型: Journal Article
    用于表面引导放射治疗(SGRT)的光学系统的热漂移增加了患者设置和监测的不确定性。这项工作描述了测量单个相机舱的漂移以及组合临床信号的漂移的方法。它提供了四种临床C-Rad催化剂+HD系统的结果。根据测得的临床漂移,提供了如何使用SGRT计算患者设置和患者位置监测中的相关不确定性的食谱。解释了减少漂移影响的策略。虽然结果特定于所调查的系统,方法是可转让的,临床食谱是普遍适用的。
    Thermal drift of optical systems employed for surface guided radiation therapy (SGRT) adds uncertainty to patient setup and monitoring. This work describes methods to measure the drift of individual camera pods as well as the drift of the combined clinical signal. It presents results for four clinical C-Rad Catalyst+ HD systems. Based on the measured clinical drift, recipes are provided on how to calculate relevant uncertainties in patient setup and patient position monitoring with SGRT. Strategies to reduce the impact of drift are explained. While the results are specific to the systems investigated, the methodology is transferable and the clinical recipes are universally applicable.
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  • 文章类型: Journal Article
    本研究旨在评估应用于临床目标体积的边缘的影响,要创建计划目标卷,在一项头颈部癌症多中心随机对照试验中开发的新型吞咽困难优化调强放疗技术的计划质量。符合协议的计划用于单个基准计划案例。较大的边缘与对有风险的相邻器官的较高剂量相关,特别是下咽收缩肌,但与一些改善的低剂量目标覆盖率相吻合。如果当地做法允许,建议使用3毫米的边距。
    This study aimed to assess the impact of the margin applied to the clinical target volume, to create the planning target volume, on plan quality of a novel dysphagia-optimised intensity modulated radiotherapy technique developed within a head and neck cancer multicentre randomised controlled trial. Protocol compliant plans were used for a single benchmark planning case. Larger margins were associated with higher doses to adjacent organs at risk, particularly the inferior pharyngeal constrictor muscle, but coincided with some improved low dose target coverage. A 3 mm margin is recommended for this technique if local practices allow.
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  • 文章类型: Journal Article
    研究纹理分析和机器学习在肝转移患者介入前锥形束计算机断层扫描(CBCT)图像上预测经动脉放射栓塞(TARE)治疗反应的潜力。
    在这项IRB批准的回顾性单中心研究中,36例患者共104例肝转移(男性占56%,平均年龄61.1±13岁)在TARE之前接受CBCT检查,并在治疗后6个月进行随访成像。根据RECIST版本1.1评估治疗反应,并将其分为疾病控制(部分反应/稳定的疾病)与疾病进展(进行性疾病)。目标病变分割后,使用pyRadiomics软件包提取了对应于七个不同特征类的104个影像组学特征。在降维之后,在定制人工神经网络(ANN)上执行机器学习分类。对先前未看到的测试数据集进行10倍交叉验证。
    来自TARE的平均施用累积活性为1.6Gbq(±0.5Gbq)。在平均5.9±0.8个月的随访中,82%的转移灶实现了疾病控制。降维后,104个(15%)纹理分析特征中的15个仍用于进一步分析。在以前看不见的一组肝转移瘤中,多层感知器ANN的灵敏度为94.2%,特异性为67.7%,受试者工作特征曲线下面积为0.85。
    我们的研究表明,基于纹理分析的机器学习可能具有使用肝转移患者的治疗前CBCT图像来预测对TARE的治疗反应的潜力。
    UNASSIGNED: To investigate the potential of texture analysis and machine learning to predict treatment response to transarterial radioembolization (TARE) on pre-interventional cone-beam computed tomography (CBCT) images in patients with liver metastases.
    UNASSIGNED: In this IRB-approved retrospective single-center study 36 patients with a total of 104 liver metastases (56 % male, mean age 61.1 ± 13 years) underwent CBCT prior to TARE and follow-up imaging 6 months after therapy. Treatment response was evaluated according to RECIST version 1.1 and dichotomized into disease control (partial response/stable disease) versus disease progression (progressive disease). After target lesion segmentation, 104 radiomics features corresponding to seven different feature classes were extracted with the pyRadiomics package. After dimension reduction machine learning classifications were performed on a custom artificial neural network (ANN). Ten-fold cross validation on a previously unseen test data set was performed.
    UNASSIGNED: The average administered cumulative activity from TARE was 1.6 Gbq (± 0.5 Gbq). At a mean follow-up of 5.9 ± 0.8 months disease control was achieved in 82 % of metastases. After dimension reduction, 15 of 104 (15 %) texture analysis features remained for further analysis. On a previously unseen set of liver metastases the Multilayer Perceptron ANN yielded a sensitivity of 94.2 %, specificity of 67.7 % and an area-under-the receiver operating characteristics curve of 0.85.
    UNASSIGNED: Our study indicates that texture analysis-based machine learning may has potential to predict treatment response to TARE using pre-treatment CBCT images of patients with liver metastases with high accuracy.
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  • 文章类型: Journal Article
    超声心动图成像对于心脏毒性癌症治疗期间的患者管理至关重要。左心室射血分数是用于识别左心室功能障碍的最常用参数。然而,它对检测心脏毒性治疗引起的心功能亚临床变化缺乏敏感性.全局纵向应变(GLS)是具有诊断和预后价值的最佳研究应变参数。多项研究表明,GLS的变化是心脏毒性的早期标志物。该文件可作为帮助临床医生获取和解释心脏肿瘤学菌株的入门指南。带有嵌入式视频的案例说明了获得GLS测量值的分步方法以及要避免的常见陷阱。该文件包括GLS在心脏肿瘤学中的适应症及其在指导肿瘤治疗中的作用的简要摘要。还讨论了如何在培训和质量保证的指导下在回声实验室中实施应变的实用方法。
    Echocardiographic imaging is crucial for patient management during cardiotoxic cancer therapy. Left ventricular ejection fraction is the most commonly used parameter for identifying left ventricular dysfunction. However, it lacks sensitivity to detect subclinical changes in cardiac function due to cardiotoxic treatment. Global longitudinal strain (GLS) is the best studied strain parameter with established diagnostic and prognostic value. Multiple studies have demonstrated changes in GLS as an early marker of cardiotoxicity. This document serves as a primer to help clinicians in the acquisition and interpretation of strain in cardio-oncology. Cases with embedded videos illustrate a step-by-step approach to obtaining GLS measurements and common pitfalls to avoid. The document includes a concise summary of the indications of GLS in cardio-oncology and its role in guiding oncological therapy. Practical approaches on how to implement strain in the echo laboratory with guidance on training and quality assurance are also discussed.
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