DDX27

DDX27
  • 文章类型: Journal Article
    真核基因组的普遍转录产生非编码RNA(ncRNA),调节信使RNA(mRNA)的稳定性和翻译。MicroRNAs(miRNA/miRs)代表一组充分研究的维持细胞稳态的ncRNAs。因此,miRNA表达的任何异常都会导致疾病,包括致癌作用.根据microRNA微阵列分析,与正常口腔组织相比,内含子miR-617在口腔鳞状细胞癌(OSCC)组织中显著下调。
    通过在OSCC细胞系上进行实验,建立了miR-617介导的DDX27调控,患者样本,和异种移植裸鼠模型。过表达质粒构建体,亚硫酸氢盐测序PCR,生物信息学分析,RT-qPCR,西方印迹,双荧光素酶报告分析,和基于细胞的测定用于描述miR-617在OSCC中的作用。
    本研究表明,miR-617在OSCC细胞中具有抗增殖作用,并且由于其独立启动子的超甲基化而在OSCC细胞中部分下调。Further,我们证明miR-617通过与DDX27基因启动子以剂量依赖性和序列特异性的方式相互作用来上调DDX27基因,并且发现这种相互作用在OSCC患者样本中具有生物学相关性。随后,我们显示miR-617调节细胞增殖,凋亡,和通过调节DDX27水平的OSCC细胞的锚定非依赖性生长。此外,我们的研究表明,miR-617通过调节DDX27水平,通过PI3K/AKT/MTOR途径发挥其作用.此外,裸鼠OSCC异种移植研究显示miR-617的抗肿瘤潜能。
    miR-617介导的DDX27上调是OSCC中的一种新机制,并强调了合成miR-617模拟物在癌症治疗中的治疗潜力。据我们所知,miR-617是通过与其启动子相互作用上调蛋白质编码基因表达的miRNA的第15个实例。
    UNASSIGNED: Pervasive transcription of the eukaryotic genome generates noncoding RNAs (ncRNAs), which regulate messenger RNA (mRNA) stability and translation. MicroRNAs (miRNAs/miRs) represent a group of well-studied ncRNAs that maintain cellular homeostasis. Thus, any aberration in miRNA expression can cause diseases, including carcinogenesis. According to microRNA microarray analyses, intronic miR-617 is significantly downregulated in oral squamous cell carcinoma (OSCC) tissues compared to normal oral tissues.
    UNASSIGNED: The miR-617-mediated regulation of DDX27 is established by performing experiments on OSCC cell lines, patient samples, and xenograft nude mice model. Overexpression plasmid constructs, bisulphite sequencing PCR, bioinformatics analyses, RT-qPCR, Western blotting, dual-luciferase reporter assay, and cell-based assays are utilized to delineate the role of miR-617 in OSCC.
    UNASSIGNED: The present study shows that miR-617 has an anti-proliferative role in OSCC cells and is partly downregulated in OSCC cells due to the hypermethylation of its independent promoter. Further, we demonstrate that miR-617 upregulates DDX27 gene by interacting with its promoter in a dose-dependent and sequence-specific manner, and this interaction is found to be biologically relevant in OSCC patient samples. Subsequently, we show that miR-617 regulates cell proliferation, apoptosis, and anchorage-independent growth of OSCC cells by modulating DDX27 levels. Besides, our study shows that miR-617 exerts its effects through the PI3K/AKT/MTOR pathway via regulating DDX27 levels. Furthermore, the OSCC xenograft study in nude mice shows the anti-tumorigenic potential of miR-617.
    UNASSIGNED: miR-617-mediated upregulation of DDX27 is a novel mechanism in OSCC and underscores the therapeutic potential of synthetic miR-617 mimics in cancer therapeutics. To the best of our knowledge, miR-617 is the 15th example of a miRNA that upregulates the expression of a protein-coding gene by interacting with its promoter.
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  • 文章类型: Journal Article
    DEAD-box解旋酶27(DDX27),DEAD-Box核酸解旋酶家族的一员,在口腔鳞状细胞癌(OSCC)中具有难以捉摸的作用。本研究旨在揭示DDX27在OSCC中的调控功能,并探索其下游靶点。
    方法:使用商业口腔鳞状细胞癌(OSCC)组织微阵列(TMA)。我们通过GEO数据库分析了OSCC中差异表达的基因。使用shRNA介导的慢病毒方法实现靶基因沉默。Coexpedia分析确定了与DDX27相关的共表达基因。此外,免疫共沉淀(Co-IP)实验证实了DDX27和CSE1L之间的蛋白质相互作用。采用异种移植肿瘤模型评估DDX27在OSCC肿瘤形成中的作用。
    结果:DDX27在OSCC中的表达升高与更高的病理分级相关。DDX27敲低导致细胞增殖减少,细胞凋亡增加,抑制细胞迁移,并诱导G2/M期细胞周期停滞,以及受损的肿瘤生长。Coexpedia分析确定了STAU1,NELFCD,和CSE1L作为最高共表达基因。靶向STAU1,NELFCD的慢病毒载体,和CSE1L表明沉默CSE1L显著损害细胞生长,将其指示为DDX27的下游目标。细胞拯救实验表明,增加DDX27水平改善细胞增殖,细胞凋亡减弱,和CSE1L耗竭阻断DDX27过表达诱导的细胞发育。
    结论:本研究强调DDX27是OSCC治疗的潜在治疗靶点,阐明其在OSCC发展中的关键作用。靶向DDX27或其下游效应器,CSE1L,为创新的OSCC疗法提供了希望。
    UNASSIGNED: DEAD-box helicase 27 (DDX27), a member of the DEAD-Box nucleic acid helicase family, holds an elusive role in oral squamous cell carcinoma (OSCC). This study aims to unravel the regulatory functions of DDX27 in OSCC and explore its downstream targets.
    METHODS: A commercial oral squamous cell carcinoma (OSCC) tissue microarray (TMA) was utilized. We analyzed differentially expressed genes in OSCC through the GEO database. Target gene silencing was achieved using the shRNA-mediated lentivirus method. Coexpedia analysis identified co-expressed genes associated with DDX27. Additionally, a Co-Immunoprecipitation (Co-IP) experiment confirmed the protein interaction between DDX27 and CSE1L. Xenograft tumor models were employed to evaluate DDX27\'s role in OSCC tumor formation.
    RESULTS: Elevated DDX27 expression in OSCC correlated with a higher pathological grade. DDX27 knockdown resulted in decreased cell proliferation, increased apoptosis, inhibited cell migration, and induced G2/M phase cell cycle arrest, as well as impaired tumor outgrowth. Coexpedia analysis identified STAU1, NELFCD, and CSE1L as top co-expressed genes. Lentiviral vectors targeting STAU1, NELFCD, and CSE1L revealed that silencing CSE1L significantly impaired cell growth, indicating it as a downstream target of DDX27. Cell rescue experiments demonstrated that increased DDX27 levels ameliorated cell proliferation, attenuated apoptosis, and CSE1L depletion blocked cell development induced by DDX27 overexpression.
    CONCLUSIONS: This study highlighted DDX27 as a potential therapeutic target for OSCC treatment, shedding light on its crucial role in OSCC development. Targeting DDX27 or its downstream effector, CSE1L, holds promise for innovative OSCC therapies.
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  • 文章类型: Journal Article
    背景:结直肠癌(CRC)是全球最常见的诊断癌症之一,发病率高,预后差。Circ_RNF13在CRC中上调;然而,circ_RNF13的生物学作用和下游信号仍未定义。
    方法:通过Sanger测序确定circ_RNF13的表征,qRT-PCR,亚细胞分级分离测定,和RNA鱼类。采用Westernblot分析和qRT-PCR检测CRC肿瘤样品和细胞中关键分子和干性标志物的表达。通过球体形成试验评估CRC细胞的干细胞样活性。流式细胞术,和免疫荧光(IF)。通过CCK-8测定监测细胞活力。通过集落形成和细胞凋亡测定来评估CRC细胞的化学敏感性。生物信息学分析,RIP测定,RNA下拉法,FISH/IF染色检测circ_RNF13与TRIM24的相关性。通过ChIP分析研究DDX27的转录调控,并通过Co-IP检测到TRIM24的翻译后调节。在异种移植模型中验证了体外发现。
    结果:circ_RNF13和DDX27在CRC肿瘤样品和细胞中升高。敲除circ_RNF13或DDX27抑制CRC细胞的干性并增加化学敏感性。机械上,circ_RNF13通过TRIM24介导的转录调控调控DDX27的表达,circ_RNF13通过抑制FBXW7介导的TRIM24降解来稳定TRIM24。体内研究表明,circ_RNF13的敲低损害了异种移植模型中CRC的干性并增强了其化学敏感性。
    结论:circ_RNF13通过TRIM24稳定介导的DDX27的转录调控,调节CRC的干性和化疗敏感性。
    BACKGROUND: Colorectal cancer (CRC) is one of the most commonly diagnosed cancers with high incidence and poor prognosis worldwide. Circ_RNF13 is upregulated in CRC; however, the biological roles and downstream signaling of circ_RNF13 remain undefined.
    METHODS: The characterization of circ_RNF13 was determined by Sanger sequencing, qRT-PCR, subcellular fractionation assay, and RNA FISH. Western blot analysis and qRT-PCR were employed to detect the expression of the key molecules and stemness markers in CRC tumor samples and cells. The stem-like activities of CRC cells were assessed by sphere formation assay, flow cytometry, and immunofluorescence (IF). Cell viability was monitored by CCK-8 assay. The chemosensitivity of CRC cells was assessed by colony formation and cell apoptosis assays. Bioinformatics analysis, RIP assay, RNA pull-down assay, and FISH/IF staining were used to detect the association between circ_RNF13 and TRIM24. The transcriptional regulation of DDX27 was investigated by ChIP assay, and the post-translational regulation of TRIM24 was detected by Co-IP. The in vitro findings were verified in a xenograft model.
    RESULTS: circ_RNF13 and DDX27 were elevated in CRC tumor samples and cells. Knockdown of circ_RNF13 or DDX27 inhibited stemness and increased chemosensitivity in CRC cells. Mechanistically, circ_RNF13 regulated DDX27 expression via TRIM24-mediated transcriptional regulation, and circ_RNF13 stabilized TRIM24 via suppressing FBXW7-mediated TRIM24 degradation. In vivo studies revealed that the knockdown of circ_RNF13 impaired stemness and enhanced the chemosensitivity of CRC in the xenograft model.
    CONCLUSIONS: circ_RNF13 regulated the stemness and chemosensitivity of CRC by transcriptional regulation of DDX27 mediated by TRIM24 stabilization.
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  • 文章类型: Journal Article
    DEAD-box解旋酶27(DDX27)先前被确定为癌变过程中的重要介质,虽然其在胃癌(GC)中的作用尚未完全阐明。这里,我们旨在探讨DDX27在GC中的作用机制和临床意义。分析公共数据集以确定DDX27表达谱。qRT-PCR,蛋白质印迹,和免疫组织化学分析用于研究GC细胞系和临床样品中的DDX27表达。在体外和体内探讨了DDX27在GC转移中的作用。质谱,RNA-seq,进行了选择性剪接分析,以证明DDX27介导的GC分子机制。我们发现DDX27在GC中高度表达,高DDX27水平提示预后不良。DDX27表达增高可促进GC转移,而DDX27敲低会损害GC侵袭性。机械上,DDX27下调后LLP表达显著改变,进一步的结果表明,LPP可能通过选择性剪接受到DDX27的调控。总之,我们的研究表明,DDX27通过前转移性DDX27/LPP/EMT调节轴促进GC恶性进展.
    DEAD-box helicase 27 (DDX27) was previously identified as an important mediator during carcinogenesis, while its role in gastric cancer (GC) is not yet fully elucidated. Here, we aimed to investigate the mechanism and clinical significance of DDX27 in GC. Public datasets were analyzed to determine DDX27 expression profiling. The qRT-PCR, Western blot, and immunohistochemistry analyses were employed to investigate the DDX27 expression in GC cell lines and clinical samples. The role of DDX27 in GC metastasis was explored in vitro and in vivo. Mass spectrometry, RNA-seq, and alternative splicing analysis were conducted to demonstrate the DDX27-mediated molecular mechanisms in GC. We discovered that DDX27 was highly expressed in GCs, and a high level of DDX27 indicated poor prognosis. An increased DDX27 expression could promote GC metastasis, while DDX27 knockdown impaired GC aggressiveness. Mechanically, the LLP expression was significantly altered after DDX27 downregulation, and further results indicated that LPP may be regulated by DDX27 via alternative splicing. In summary, our study indicated that DDX27 contributed to GC malignant progression via a prometastatic DDX27/LPP/EMT regulatory axis.
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  • 文章类型: Journal Article
    Introduction: DEAD-box helicase 27 (DDX27) belongs to DEAD-Box nucleic acid helicase family. The function of DDX27 in hepatocellular carcinoma (HCC) remain enigmatic. In light of this, we tried to investigate the regulatory role and underlying mechanism of DDX27 in HCC. Materials and methods: DDX27 expression levels were detected by qRT-PCR, Western blot and immunohistochemistry assays in HCC tissues and cells. Colony formation, CCK-8, growth curve, wound healing and transwell assays were conducted to investigate the effect of DDX27 on the proliferation and metastasis of HCC cells. RNA-sequencing was performed to detect the effect of DDX27 on downstream signaling pathway. The effect of DDX27 on HCC progression was evaluated using in vivo murine xenograft model. Results: we found an increased expression of DDX27 in HCC tissues with comparison to its para-tumor tissues. The high expression levels of DDX27 were associated with poor prognosis in HCC patients. DDX27 upregulation promoted cell metastasis. Mechanistic studies suggested that DDX27 overexpression induces the major vault protein (MVP) expression and enhances the phosphorylation levels of ERK1/2. Inhibition of ERK pathway impaired the cellular metastastic abilities induced by DDX27. The induction of DDX27 in HCC progression was further confirmed from tumors in mouse model. Conclusion: our results disclose a novel mechanism by which DDX27 enhances ERK signaling during HCC progression. DDX27 might be used in targeted therapy for HCC patients.
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  • 文章类型: Journal Article
    BACKGROUND: Cancer stem cells (CSCs) are responsible for all important characteristics of tumors. DEAD-box helicase 27 (DDX27) is a member of the DEAD-box RNA helicase family, and there have been only a few studies on DDX27 function in cancer cells. This study is aimed at exploring whether DDX27 has any relation to tumorigenesis of colorectal cancer (CRC) and elucidating the potential mechanism.
    METHODS: Data from Catalog Of Somatic Mutations In Cancer, Gene Expression Omnibus, and The Cancer Genome Atlas databases reveal that DDX27 is overexpressed in CRC tissues. qRT-PCR and Western blots were used to evaluate the expression level of DDX27 in 40 paired clinical CRC samples. DDX27 was knockdown in HT29 and HCT116 cell line with shRNA. Then CCK-8, colony formation assay and flow cytometry assay were performed to examine proliferative ability, cell cycle and sensitivity to 5-fluorouracil. Sphere-formation assay and in vivo subcutaneous tumor-formation assay were used to assess self-renewal in vitro and vivo as well as the tumor-initiating potential.
    RESULTS: DDX27 is upregulated in CRC tissues and downregulation of DDX27 inhibits proliferation of colorectal cancer cell and promotes sensitivity to 5-fluorouracil. Downregulation of DDX27 can downregulate the gene expression of known CSC markers in CRC cells, inhibit sphere-formation ability, and promote colonosphere differentiation. Downregulation of DDX27 in CSCs can decrease the tumor-initiating ability of CRC cells in vivo.
    CONCLUSIONS: DDX27 may play a tumorpromoter role of CRC by regulating the stem cell-like activity of CRC cells.
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    文章类型: Journal Article
    Previously, we have reported that gain at chromosome 20q13 is the most common genomic copy number aberration in gastric cancer (GC) (29/30 cases), and that among the genes located in this region, we have identified DDX27, whose expression level shows the highest correlation with genomic copy number, as a candidate therapeutic target for GC. Here, we analyzed the clinicopathological significance of DDX27 using immunohistochemistry and studied its functions using knockdown assays. We found that DDX27 was frequently upregulated in GC tissues (98 of 140 cases, 70%), and significantly associated with venous invasion and liver metastasis. Furthermore, multivariate analysis of GC patients showed that high expression of DDX27 was independently associated with poorer prognosis. In functional assays, knockdown of DDX27 reduced the ability of GC cells to form colonies both on conventional plates and soft agar, but had little effect on their invasiveness. We also found that knockdown of DDX27 reduced the viability of GC cells through inhibition of cell cycle progression independently of apoptosis. Interestingly, DDX27 depletion induced accumulation of TP53 in a TP53 wild-type cell line, AGS, but not in a TP53-deleted cell line, 44As3, although DDX27 knockdown commonly reduced the viability of both, indicating the TP53-dependent and independent cell cycle control of DDX27. Thus, our results suggest that expression of DDX27 contributes to colony formation by GC cells through cell cycle control and may be a potential therapeutic target for GC patients with chromosome gain at 20q13.
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