Computer-interpretable guidelines

计算机可解释指南
  • 文章类型: Journal Article
    背景:临床实践指南是旨在优化患者护理的系统开发声明。然而,指南建议的无间隙实施要求卫生保健人员不仅要了解建议并支持其内容,还要认识到适用的每种情况。不要错过应该应用建议的情况,计算机化的临床决策支持可以通过一个系统来提供,该系统允许自动监测个体患者对临床指南建议的遵守情况.
    目的:本研究旨在收集和分析一个系统的要求,该系统允许监测个体患者对循证临床指南建议的遵守情况,基于这些要求,设计和实施一个软件原型,该原型将指南建议与单个患者数据集成在一起,并演示原型在治疗建议中的实用性。
    方法:我们与有经验的重症监护临床医生进行了工作过程分析,以开发一个概念模型,说明如何在临床常规中支持指南依从性监测,并确定模型中的哪些步骤可以通过电子方式支持。然后,我们确定了软件系统的核心需求,以支持关键利益相关者(临床医生,指南开发人员,健康数据工程师,和软件开发人员)。根据这些要求,我们设计并实现了一个模块化的系统架构。为了证明它的效用,我们利用欧洲一家大型大学医院的临床数据,应用原型监测COVID-19治疗建议的依从性.
    结果:我们设计了一个系统,该系统将指南建议与实时临床数据集成在一起,以评估单个指南建议的依从性,并开发了功能原型。与临床工作人员进行的需求分析得出了一个流程图,描述了应如何监控对建议的遵守情况的工作过程。确定了四个核心要求:能够决定建议是否适用于特定患者,整合来自不同数据格式和数据结构的临床数据的能力,显示原始患者数据的能力,并使用基于资源的快速医疗保健互操作性格式来表示临床实践指南,以提供可互操作的,基于标准的指南推荐交换格式。
    结论:我们的系统在个体患者治疗和医院质量管理方面具有优势。然而,需要进一步的研究来衡量其对患者结局的影响,并评估其在不同临床环境中的资源有效性.我们指定了模块化软件体系结构,该体系结构允许来自不同领域的专家独立工作并专注于他们的专业领域。我们已经在开源许可下发布了我们系统的源代码,并邀请合作进一步开发该系统。
    Clinical practice guidelines are systematically developed statements intended to optimize patient care. However, a gapless implementation of guideline recommendations requires health care personnel not only to be aware of the recommendations and to support their content but also to recognize every situation in which they are applicable. To not miss situations in which recommendations should be applied, computerized clinical decision support can be provided through a system that allows an automated monitoring of adherence to clinical guideline recommendations in individual patients.
    This study aims to collect and analyze the requirements for a system that allows the monitoring of adherence to evidence-based clinical guideline recommendations in individual patients and, based on these requirements, to design and implement a software prototype that integrates guideline recommendations with individual patient data, and to demonstrate the prototype\'s utility in treatment recommendations.
    We performed a work process analysis with experienced intensive care clinicians to develop a conceptual model of how to support guideline adherence monitoring in clinical routine and identified which steps in the model could be supported electronically. We then identified the core requirements of a software system to support recommendation adherence monitoring in a consensus-based requirements analysis within the loosely structured focus group work of key stakeholders (clinicians, guideline developers, health data engineers, and software developers). On the basis of these requirements, we designed and implemented a modular system architecture. To demonstrate its utility, we applied the prototype to monitor adherence to a COVID-19 treatment recommendation using clinical data from a large European university hospital.
    We designed a system that integrates guideline recommendations with real-time clinical data to evaluate individual guideline recommendation adherence and developed a functional prototype. The needs analysis with clinical staff resulted in a flowchart describing the work process of how adherence to recommendations should be monitored. Four core requirements were identified: the ability to decide whether a recommendation is applicable and implemented for a specific patient, the ability to integrate clinical data from different data formats and data structures, the ability to display raw patient data, and the use of a Fast Healthcare Interoperability Resources-based format for the representation of clinical practice guidelines to provide an interoperable, standards-based guideline recommendation exchange format.
    Our system has advantages in terms of individual patient treatment and quality management in hospitals. However, further studies are needed to measure its impact on patient outcomes and evaluate its resource effectiveness in different clinical settings. We specified a modular software architecture that allows experts from different fields to work independently and focus on their area of expertise. We have released the source code of our system under an open-source license and invite for collaborative further development of the system.
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  • 文章类型: Review
    Clinical Practice Guidelines (CPGs) include recommendations aimed at optimising patient care, informed by a review of the available clinical evidence. To achieve their potential benefits, CPG should be readily available at the point of care. This can be done by translating CPG recommendations into one of the languages for Computer-Interpretable Guidelines (CIGs). This is a difficult task for which the collaboration of clinical and technical staff is crucial. However, in general CIG languages are not accessible to non-technical staff. We propose to support the modelling of CPG processes (and hence the authoring of CIGs) based on a transformation, from a preliminary specification in a more accessible language into an implementation in a CIG language. In this paper, we approach this transformation following the Model-Driven Development (MDD) paradigm, in which models and transformations are key elements for software development. To demonstrate the approach, we implemented and tested an algorithm for the transformation from the BPMN language for business processes to the PROforma CIG language. This implementation uses transformations defined in the ATLAS Transformation Language. Additionally, we conducted a small experiment to assess the hypothesis that a language such as BPMN can facilitate the modelling of CPG processes by clinical and technical staff.
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  • 文章类型: Journal Article
    背景:临床实践指南是基于现有最佳证据的声明,他们的目标是提高病人护理的质量。将临床实践指南集成到计算机系统中可以帮助医生减少医疗错误并帮助他们获得最佳实践。基于指南的临床决策支持系统在支持医生的决策方面发挥着重要作用。同时,系统错误是决策支持系统设计中最关键的问题,可以影响其性能和效率。一个完善的本体可以在这个问题上有所帮助。拟议的系统审查将具体说明方法,组件,规则的语言,当前基于本体驱动的基于指南的临床决策支持系统的评价方法。
    方法:这篇综述将通过搜索MEDLINE(通过Ovid)来识别文献,PubMed,EMBASE,科克伦图书馆,CINAHL,ScienceDirect,IEEEXplore,ACM数字图书馆。灰色文学,引用列表,并将检索所纳入研究的引用文章。纳入研究的质量将通过混合方法评估工具(MMAT-2018版)进行评估。至少有两名独立审稿人将进行筛选,质量评估,和数据提取。第三位审稿人将解决任何分歧。将根据系统类型和本体工程评估数据进行适当的数据分析。
    结论:该研究将为在基于指南的临床决策支持系统中应用本体提供证据。这项系统审查的结果将为决策支持系统设计人员和开发人员提供指导,技术人员,系统提供商,政策制定者,和利益相关者。本体构建者可以使用本综述中的信息为个性化医疗构建结构良好的本体。
    背景:PROSPEROCRD42018106501.
    Clinical practice guidelines are statements which are based on the best available evidence, and their goal is to improve the quality of patient care. Integrating clinical practice guidelines into computer systems can help physicians reduce medical errors and help them to have the best possible practice. Guideline-based clinical decision support systems play a significant role in supporting physicians in their decisions. Meantime, system errors are the most critical concerns in designing decision support systems that can affect their performance and efficacy. A well-developed ontology can be helpful in this matter. The proposed systematic review will specify the methods, components, language of rules, and evaluation methods of current ontology-driven guideline-based clinical decision support systems.
    This review will identify literature through searching MEDLINE (via Ovid), PubMed, EMBASE, Cochrane Library, CINAHL, ScienceDirect, IEEEXplore, and ACM Digital Library. Gray literature, reference lists, and citing articles of the included studies will be searched. The quality of the included studies will be assessed by the mixed methods appraisal tool (MMAT-version 2018). At least two independent reviewers will perform the screening, quality assessment, and data extraction. A third reviewer will resolve any disagreements. Proper data analysis will be performed based on the type of system and ontology engineering evaluation data.
    The study will provide evidence regarding applying ontologies in guideline-based clinical decision support systems. The findings of this systematic review will be a guide for decision support system designers and developers, technologists, system providers, policymakers, and stakeholders. Ontology builders can use the information in this review to build well-structured ontologies for personalized medicine.
    PROSPERO CRD42018106501.
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  • 文章类型: Journal Article
    背景:对临床决策支持系统(CDS)功能的不满被认为是CDSS开发的主要挑战。CDSS设计中的主要困难是将功能与期望的和实际的临床工作流程相匹配。计算机可解释指南(CIG)用于以可计算语言形式化临床实践指南(CPG)中的医学知识。然而,现有的CIG框架需要针对每个CIG语言的特定解释器,阻碍了实现和互操作性的简易性。
    目的:本文旨在描述一种不同的临床知识和数据表示方法。我们打算改变临床医生对CDSS的看法,使其具有足够的表达能力,同时为Web应用程序和移动应用程序保持较小的通信和软件足迹。这种方法最初旨在为WebCDSS和未来的移动应用程序创建一个可读和最小的语法,用于产前护理指南,通过将系统行为与临床工作流程对齐来改进人机交互和增强可用性。
    方法:我们为CDSS设计并实现了架构设计,,它使用模型-视图-控制器(MVC)架构和基于XML的MVC架构中的知识引擎。知识引擎设计还集成了CDSS中所需的匹配临床护理工作流程的要求。对于设计任务的此组件,我们在特定的目标临床环境中使用了用于产前护理的CPG的工作本体论分析.
    结果:与用于CDS的其他常用CIG相比,我们的XML方法可以用来利用XML的灵活格式来促进结构化数据的电子共享。更重要的是,我们可以利用它的灵活性,以无处不在的低级规范语言标准化CIG结构设计,普遍,计算效率高,可与网络技术集成,和人类可读的。
    结论:我们的知识表示框架结合了医学中CDS中使用的其他CIGs的基本要素,并被证明足以编码许多产前保健CPGs及其相关的临床工作流程。该框架似乎足够通用,可以与医学中的其他CPG一起使用。XML被证明是一种语言,足以以可计算的形式描述计划问题,并且具有足够的限制性和表达能力,可以在临床系统中实现。它也可以有效的移动应用程序,间歇性通信需要一个小的占地面积和一个自主的应用程序。这种方法可用于整合医学中更专业的CIGs的重叠功能。
    BACKGROUND: Displeasure with the functionality of clinical decision support systems (CDSSs) is considered the primary challenge in CDSS development. A major difficulty in CDSS design is matching the functionality to the desired and actual clinical workflow. Computer-interpretable guidelines (CIGs) are used to formalize medical knowledge in clinical practice guidelines (CPGs) in a computable language. However, existing CIG frameworks require a specific interpreter for each CIG language, hindering the ease of implementation and interoperability.
    OBJECTIVE: This paper aims to describe a different approach to the representation of clinical knowledge and data. We intended to change the clinician\'s perception of a CDSS with sufficient expressivity of the representation while maintaining a small communication and software footprint for both a web application and a mobile app. This approach was originally intended to create a readable and minimal syntax for a web CDSS and future mobile app for antenatal care guidelines with improved human-computer interaction and enhanced usability by aligning the system behavior with clinical workflow.
    METHODS: We designed and implemented an architecture design for our CDSS, which uses the model-view-controller (MVC) architecture and a knowledge engine in the MVC architecture based on XML. The knowledge engine design also integrated the requirement of matching clinical care workflow that was desired in the CDSS. For this component of the design task, we used a work ontology analysis of the CPGs for antenatal care in our particular target clinical settings.
    RESULTS: In comparison to other common CIGs used for CDSSs, our XML approach can be used to take advantage of the flexible format of XML to facilitate the electronic sharing of structured data. More importantly, we can take advantage of its flexibility to standardize CIG structure design in a low-level specification language that is ubiquitous, universal, computationally efficient, integrable with web technologies, and human readable.
    CONCLUSIONS: Our knowledge representation framework incorporates fundamental elements of other CIGs used in CDSSs in medicine and proved adequate to encode a number of antenatal health care CPGs and their associated clinical workflows. The framework appears general enough to be used with other CPGs in medicine. XML proved to be a language expressive enough to describe planning problems in a computable form and restrictive and expressive enough to implement in a clinical system. It can also be effective for mobile apps, where intermittent communication requires a small footprint and an autonomous app. This approach can be used to incorporate overlapping capabilities of more specialized CIGs in medicine.
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  • 文章类型: Journal Article
    Patients with chronic multimorbidity are becoming more common as life expectancy increases, making it necessary for physicians to develop complex management plans. We are looking at the patient management process as a goal-attainment problem. Hence, our aim is to develop a goal-oriented methodology for providing decision support for managing patients with multimorbidity continuously, as the patient\'s health state is progressing and new goals arise (e.g., treat ulcer, prevent osteoporosis). Our methodology allows us to detect and mitigate inconsistencies among guideline recommendations stemming from multiple clinical guidelines, while consulting medical ontologies and terminologies and relying on patient information standards. This methodology and its implementation as a decision-support system, called GoCom, starts with computer-interpretable clinical guidelines (CIGs) for single problems that are formalized using the PROforma CIG language. We previously published the architecture of the system as well as a CIG elicitation guide for enriching PROforma tasks with properties referring to vocabulary codes of goals and physiological effects of management plans. In this paper, we provide a formalization of the conceptual model of GoCom that generates, for each morbidity of the patient, a patient-specific goal tree that results from the PROforma engine\'s enactment of the CIG with the patient\'s data. We also present the \"Controller\" algorithm that drives the GoCom system. Given a new problem that a patient develops, the Controller detects inconsistencies among goals pertaining to different comorbid problems and consults the CIGs to generate alternative non-conflicted and goal-oriented management plans that address the multiple goals simultaneously. In this stage of our research, the inconsistencies that can be detected are of two types - starting vs. stopping medications that belong to the same medication class hierarchy, and detecting opposing physiological effect goals that are specified in concurrent CIGs (e.g., decreased blood pressure vs. increased blood pressure). However, the design of GoCom is modular and generic and allows the future introduction of additional interaction detection and mitigation strategies. Moreover, GoCom generates explanations of the alternative non-conflicted management plans, based on recommendations stemming from the clinical guidelines and reasoning patterns. GoCom\'s functionality was evaluated using three cases of multimorbidity interactions that were checked by our three clinicians. Usefulness was evaluated with two studies. The first evaluation was a pilot study with ten 6th year medical students and the second evaluation was done with 27 6th medical students and interns. The participants solved complex realistic cases of multimorbidity patients: with and without decision-support, two cases in the first evaluation and 6 cases in the second evaluation. Use of GoCom increased completeness of the patient management plans produced by the medical students from 0.44 to 0.71 (P-value of 0.0005) in the first evaluation, and from 0.31 to 0.78 (P-value < 0.0001) in the second evaluation. Correctness in the first evaluation was very high with (0.98) or without the system (0.91), with non-significant difference (P-value ≥ 0.17). In the second evaluation, use of GoCom increased correctness from 0.68 to 0.83 (P-value of 0.001). In addition, GoCom\'s explanation and visualization were perceived as useful by the vast majority of participants. While GoCom\'s detection of goal interactions is currently limited to detection of starting vs. stopping the same medication or medication subclasses and detecting conflicting physiological effects of concurrent medications, the evaluation demonstrated potential of the system for improving clinical decision-making for multimorbidity patients.
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  • 文章类型: Journal Article
    Maintenance of computer-interpretable guidelines is complicated by evolving medical knowledge and by the requirement to customize content to local practice settings. We developed a framework to support knowledge engineers in customization and maintenance of computer-interpretable guidelines specified in the PROforma formalism. In our layered approach, the computer-interpretable guidelines containing the original clinical guideline serves as the primary layer and local customizations form secondary layers that adhere to its schema while augmenting it. Java code unifies the layers into a single enactable computer-interpretable guidelines. We performed a pilot experiment to verify the effectiveness of a layered framework. In this first attempt, we evaluated the hypothesis that the layered computer-interpretable guidelines framework supports knowledge engineers in maintenance of customized computer-interpretable guidelines. Participants who used the layered framework completed an update process of the primary knowledge in less time and made fewer errors as compared to those using the single-layer framework.
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  • 文章类型: Journal Article
    临床建议的自动解释是一项艰巨的任务,当它涉及复杂的时间约束的处理时,更是如此。为了解决这个问题,本文提出了一种基于web的系统。其基础模型提供了临床实践指南中时间约束的全面表示。通过一个案例研究显示了该模型的表现力和范围,该案例研究以结肠癌的诊断和管理临床实践指南为特征。所提出的模型足以表示指南中的时间约束,特别是那些定义周期性事件并对患者状态评估施加时间限制的事件。该基于网络的工具充当医疗保健专业人员的医疗保健助手,结合集中注意力和提供针对患者的建议的作用。
    The automatic interpretation of clinical recommendations is a difficult task, even more so when it involves the processing of complex temporal constraints. In order to address this issue, a web-based system is presented herein. Its underlying model provides a comprehensive representation of temporal constraints in Clinical Practice Guidelines. The expressiveness and range of the model are shown through a case study featuring a Clinical Practice Guideline for the diagnosis and management of colon cancer. The proposed model was sufficient to represent the temporal constraints in the guideline, especially those that defined periodic events and placed temporal constraints on the assessment of patient states. The web-based tool acts as a health care assistant to health care professionals, combining the roles of focusing attention and providing patient-specific advice.
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  • 文章类型: Journal Article
    背景:在医疗保健组织中实施决策支持系统需要将临床领域知识与资源约束集成。计算机可解释指南(CIG)是解决临床问题的绝佳工具,而业务流程管理(BPM)语言和工作流(Wf)引擎则管理物流组织约束。
    目的:我们的目的是对成功实施患者护理路径所需的所有相关因素进行编排,尤其是当跨越连续的护理时,从急性到社区或家庭护理。
    方法:我们考虑了将CIG与组织工作流集成的三种策略:扩展CIG或BPM语言及其引擎,或者在它们之间创造相互作用。我们使用相互作用方法来实现由房颤领域的aCIG实现产生的一组用例。为了提供更具可扩展性和基于标准的解决方案,我们探讨了跨企业文档工作流集成配置文件的使用。
    结果:我们描述了五个用例的概念验证实现。我们利用MobiGuide项目的个人健康记录来实现ActivitiBPM引擎和PicardCIG引擎之间的松散耦合方法。通过轮询检测PHR的变化。IHE配置文件用于开发工作流文档,以协调心脏复律的跨企业执行。
    结论:CIG和BPM引擎之间的相互作用可以支持组织环境中护理流程的协调。
    BACKGROUND: Implementing a decision-support system within a healthcare organization requires integration of clinical domain knowledge with resource constraints. Computer-interpretable guidelines (CIG) are excellent instruments for addressing clinical aspects while business process management (BPM) languages and Workflow (Wf) engines manage the logistic organizational constraints.
    OBJECTIVE: Our objective is the orchestration of all the relevant factors needed for a successful execution of patient\'s care pathways, especially when spanning the continuum of care, from acute to community or home care.
    METHODS: We considered three strategies for integrating CIGs with organizational workflows: extending the CIG or BPM languages and their engines, or creating an interplay between them. We used the interplay approach to implement a set of use cases arising from a CIG implementation in the domain of Atrial Fibrillation. To provide a more scalable and standards-based solution, we explored the use of Cross-Enterprise Document Workflow Integration Profile.
    RESULTS: We describe our proof-of-concept implementation of five use cases. We utilized the Personal Health Record of the MobiGuide project to implement a loosely-coupled approach between the Activiti BPM engine and the Picard CIG engine. Changes in the PHR were detected by polling. IHE profiles were used to develop workflow documents that orchestrate cross-enterprise execution of cardioversion.
    CONCLUSIONS: Interplay between CIG and BPM engines can support orchestration of care flows within organizational settings.
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  • 文章类型: Journal Article
    Delivering patient-specific decision-support based on computer-interpretable guidelines (CIGs) requires mapping CIG clinical statements (data items, clinical recommendations) into patients\' data. This is most effectively done via intermediate data schemas, which enable querying the data according to the semantics of a shared standard intermediate schema. This study aims to evaluate the use of HL7 virtual medical record (vMR) and openEHR archetypes as intermediate schemas for capturing clinical statements from CIGs that are mappable to electronic health records (EHRs) containing patient data and patient-specific recommendations. Using qualitative research methods, we analyzed the encoding of ten representative clinical statements taken from two CIGs used in real decision-support systems into two health information models (openEHR archetypes and HL7 vMR instances) by four experienced informaticians. Discussion among the modelers about each case study example greatly increased our understanding of the capabilities of these standards, which we share in this educational paper. Differing in content and structure, the openEHR archetypes were found to contain a greater level of representational detail and structure while the vMR representations took fewer steps to complete. The use of openEHR in the encoding of CIG clinical statements could potentially facilitate applications other than decision-support, including intelligent data analysis and integration of additional properties of data items from existing EHRs. On the other hand, due to their smaller size and fewer details, the use of vMR potentially supports quicker mapping of EHR data into clinical statements.
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