Coamplification

共扩增
  • 文章类型: Journal Article
    背景:脂肪肉瘤是最常见的间充质恶性肿瘤之一。然而,治疗选择仍然非常有限,到目前为止,靶向治疗尚未建立.免疫疗法,这是其他肿瘤实体的突破,似乎对脂肪肉瘤没有疗效。使事情进一步复杂化,分类仍然是困难的,由于形态学的多样性和非特异性或缺乏在免疫组织化学标记,使用FISH或测序作为最佳选择的分子病理学。许多脂肪肉瘤携带MDM2基因扩增。与MDM2的基因座密切相关,存在HER3(ERBB3)基因,并且可以发生共扩增。由于HER/EGFR受体酪氨酸激酶及其抑制剂/抗体在广泛的肿瘤疾病和治疗中起作用,一些HER3抑制剂/抗体已经在临床研究中,我们假设在HER3共扩增的情况下,肿瘤可能具有进一步的潜在治疗靶点.
    方法:我们对56例存档病例进行了FISH分析(MDM2、DDIT3、HER3),随后进行了重新分类以确认脂肪肉瘤的诊断。
    结果:在56例病例中,有16例需要重新分类,在54个案例中,有20个,可以检测到HER3的簇扩增,与MDM2扩增显着相关。我们的研究表明,脂肪肉瘤的实体显示出特定的分子特征,导致现代,既定的方法论。此外,在57.1%的病例中,HER3被大量簇扩增,为靶向治疗提供了一个推定的治疗靶点。
    结论:我们的研究为进一步研究HER3基因作为脂肪肉瘤的假定治疗靶点奠定了基础。
    BACKGROUND: Liposarcomas are among the most common mesenchymal malignancies. However, the therapeutic options are still very limited and so far, targeted therapies had not yet been established. Immunotherapy, which has been a breakthrough in other oncological entities, seems to have no efficacy in liposarcoma. Complicating matters further, classification remains difficult due to the diversity of morphologies and nonspecific or absent markers in immunohistochemistry, leaving molecular pathology using FISH or sequencing as best options. Many liposarcomas harbor MDM2 gene amplifications. In close relation to the gene locus of MDM2, HER3 (ERBB3) gene is present and co-amplification could occur. Since the group of HER/EGFR receptor tyrosine kinases and its inhibitors/antibodies play a role in a broad spectrum of oncological diseases and treatments, and some HER3 inhibitors/antibodies are already under clinical investigation, we hypothesized that in case of HER3 co-amplifications a tumor might bear a further potential therapeutic target.
    METHODS: We performed FISH analysis (MDM2, DDIT3, HER3) in 56 archived cases and subsequently performed reclassification to confirm the diagnosis of liposarcoma.
    RESULTS: Next to 16 out of 56 cases needed to be re-classified, in 20 out of 54 cases, a cluster-amplification of HER3 could be detected, significantly correlating with MDM2 amplification. Our study shows that the entity of liposarcomas show specific molecular characteristics leading to reclassify archived cases by modern, established methodologies. Additionally, in 57.1% of these cases, HER3 was cluster-amplified profusely, presenting a putative therapeutic target for targeted therapy.
    CONCLUSIONS: Our study serves as the initial basis for further investigation of the HER3 gene as a putative therapeutic target in liposarcoma.
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  • 文章类型: Journal Article
    这项研究的目的是破译CCAAT/增强子结合蛋白δ(CEBPD)增强糖酵解的潜在机制,以及CEBPD和MYC共扩增在尿路上皮癌(UC)中的生物学意义。
    进行体外分析以检查改变的CEBPD或MYC表达对UC细胞的影响。在异种移植诱导的糖尿病严重联合免疫缺陷/米色小鼠中研究了高糖环境中CEBPD过表达对肿瘤生长的体内影响。数据挖掘用于交叉验证CEBPD和MYC拷贝数与转录表达之间的关联。定量逆转录聚合酶链反应,免疫组织化学,显色原位杂交,对635例UC患者样本和异种移植样本进行了靶向microRNA的原位杂交。使用国家健康保险研究数据库验证UC患者与糖尿病相关的生存率。
    CEBPD和MYC共扩增(29.6%)发生频率很高,MYC表达促进染色体不稳定,促进CEBPD拷贝数的增加和表达。CEBPD通过上调SLC2A1和HK2促进葡萄糖摄取和乳酸产生,导致线粒体裂变,增加细胞外酸化速率和降低耗氧率对燃料电池生长的影响。CEBPD通过多种调节途径上调HK2表达,包括MYC稳定,FBXW7转录激活抑制和MYC非依赖性转录抑制hsa-miR-429。临床和异种移植实验证实了CEBPD与葡萄糖代谢失调有关的生长优势以及这些基因表达之间的显着相关性。
    我们证实CEBPD通过激活AKT信号并启动从线粒体氧化磷酸化到糖酵解的代谢重编程来满足葡萄糖成瘾,在UC中具有致癌作用。这些新颖的CEBPD和MYC为中心的多层正反馈回路增强了癌症的生长,可以补充治疗方法。
    The aim of this study is to decipher the underlying mechanisms of CCAAT/enhancer-binding protein delta (CEBPD)-enhanced glycolysis as well as the biological significance of CEBPD and MYC coamplification in urothelial carcinoma (UC).
    In vitro analyses were conducted to examine the effects of altered CEBPD or MYC expression on UC cells. The in vivo effects of CEBPD overexpression in a high-glucose environment on tumour growth were investigated in xenografted induced diabetic severe combined immunodeficiency/beige mice. Data mining was used to cross-validate the associations between CEBPD and MYC copy number and transcriptional expression, quantitative reverse transcription-polymerase chain reaction, immunohistochemistry, chromogenic in situ hybridization, and in situ hybridization targeting microRNA were performed on 635 UC patient samples and xenograft samples. UC patient survival in relation to diabetes was validated by using the National Health Insurance Research Database.
    CEBPD and MYC coamplification (29.6%) occurred at a high frequency, MYC expression promoted chromosomal instability, facilitating CEBPD copy number gain and expression. CEBPD promoted glucose uptake and lactate production by upregulating SLC2A1 and HK2, leading to mitochondrial fission, increased extracellular acidification rate and decreased oxygen consumption rate to fuel cell growth. CEBPD upregulated HK2 expression through multiple regulation pathways including MYC stabilization, suppression of FBXW7 transactivation and MYC-independent transcriptional suppression of hsa-miR-429. Clinical and xenografted experiments confirmed the growth advantage of CEBPD in relation to glucose metabolic dysregulation and the significant correlations between the expression of these genes.
    We confirmed that CEBPD has an oncogenic role in UC by activating AKT signalling and initiating metabolic reprogramming from mitochondrial oxidative phosphorylation to glycolysis to satisfy glucose addiction. These novel CEBPD- and MYC-centric multilayered positive feedback loops enhance cancer growth that could complement theranostic approaches.
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  • 文章类型: Case Reports
    BACKGROUND: Molecular segmentation of breast cancer allows identification of small groups of patients who present high sensitivity to targeted agents. A patient, with chemo- and trastuzumab-resistant HER2-overexpressing breast cancer, who presented concomitant acute promyelocytic leukemia, showed a response in her breast lesions to retinoic acid, arsenic, and aracytin. We therefore investigated whether RARA gene amplification could be associated with sensitivity to retinoic acid derivatives in breast cancers.
    METHODS: Array comparative genomic hybridization and gene expression arrays were used to characterize RARA amplifications and expression in 103 breast cancer samples. In vitro activity of ATRA was characterized in T47D, SKBR3, and BT474 cell lines.
    RESULTS: Retinoic acid receptor alpha was gained or amplified in 27% of HER2-positive and 13% of HER2-negative breast cancer samples. Retinoic acid receptor alpha can be coamplified with HER2. Retinoic acid receptor alpha copy number changes could be correlated with messenger RNA expression. All-trans-retinoic acid reduced cell viability of RARA-amplified, but not RARA-normal, cell lines through apoptosis. Gene expression arrays showed that ATRA-induced apoptosis in RARA-amplified cell lines was related to an increase in CASP1 and IRF1.
    CONCLUSIONS: The results of this study suggest that breast cancers exhibiting RARA amplifications could be sensitive to retinoic acid. A phase II trial will evaluate this hypothesis in the clinical setting.
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