Blind source separation

盲源分离
  • 文章类型: Journal Article
    面向网络的研究在许多科学领域越来越受欢迎。在神经科学研究中,基于成像的网络连接措施已成为理解大脑组织的关键,可能作为个体神经指纹。分析连通性矩阵存在重大挑战,包括大脑网络的高维,观察到的连通性背后的未知潜在来源,和大量的大脑连接导致虚假的发现。在本文中,我们提出了一种新颖的具有低秩结构和均匀稀疏性(LOCUS)的盲源分离方法,作为一种完全数据驱动的网络度量分解方法。与现有的忽略脑网络拓扑的连通性矩阵向量化方法相比,LOCUS使用低秩结构为连通性矩阵实现更有效和准确的源分离。我们提出了一种新颖的基于角度的均匀稀疏性正则化,该方法比现有的低秩张量方法的稀疏性控制具有更好的性能。我们提出了一种高效的迭代节点旋转算法,该算法利用目标函数的块多凸性来解决非凸优化问题以学习LOCUS。我们通过广泛的仿真研究来说明LOCUS的优势。LOCUS在费城神经发育队列神经成像研究中的应用揭示了使用现有方法未发现的生物学上有洞察力的连接特征。
    Network-oriented research has been increasingly popular in many scientific areas. In neuroscience research, imaging-based network connectivity measures have become the key for understanding brain organizations, potentially serving as individual neural fingerprints. There are major challenges in analyzing connectivity matrices, including the high dimensionality of brain networks, unknown latent sources underlying the observed connectivity, and the large number of brain connections leading to spurious findings. In this paper we propose a novel blind source separation method with low-rank structure and uniform sparsity (LOCUS) as a fully data-driven decomposition method for network measures. Compared with the existing method that vectorizes connectivity matrices ignoring brain network topology, LOCUS achieves more efficient and accurate source separation for connectivity matrices using low-rank structure. We propose a novel angle-based uniform sparsity regularization that demonstrates better performance than the existing sparsity controls for low-rank tensor methods. We propose a highly efficient iterative node-rotation algorithm that exploits the block multiconvexity of the objective function to solve the nonconvex optimization problem for learning LOCUS. We illustrate the advantage of LOCUS through extensive simulation studies. Application of LOCUS to Philadelphia Neurodevelopmental Cohort neuroimaging study reveals biologically insightful connectivity traits which are not found using the existing method.
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  • 文章类型: Journal Article
    背景:使用非侵入性技术进行胎儿心脏健康监测对于评估整个妊娠期的胎儿健康状况至关重要。该过程需要清洁且可解释的胎儿心电图(fECG)信号。
    方法:所提出的工作是一种新颖的框架,用于从怀孕母亲的腹部ECG(aECG)记录中引出fECG信号。全面的方法包括对原始ECG信号进行预处理,盲源分离技术(BSS),分解技术,如经验模式分解(EMD),及其变体,如集合经验模式分解(EEMD),具有加性噪声的完整集合经验模式分解(CEEMDAN)。稳健集成员仿射投影(RSMAP)算法被部署用于增强所获得的fECG信号。
    结果:结果表明,所引发的fECG信号的显着改善,最大信噪比(SNR)为31.72dB,相关系数=0.899,最大心率(MHR)在108-142bpm范围内获得腹部ECG信号的所有记录。统计检验给出的p值为0.21,接受零假设。来自PhysioNet的腹部和直接胎儿心电图数据库(ABDFECGDB)已用于此分析。
    结论:所提出的框架证明了一种用于从腹部记录中激发和增强fECG信号的鲁棒有效方法。
    BACKGROUND: The utilization of non-invasive techniques for fetal cardiac health surveillance is pivotal in evaluating fetal well-being throughout the gestational period. This process requires clean and interpretable fetal Electrocardiogram (fECG) signals.
    METHODS: The proposed work is the novel framework for the elicitation of fECG signals from abdominal ECG (aECG) recordings of the pregnant mother. The comprehensive approach encompasses pre-processing of the raw ECG signal, Blind Source Separation techniques (BSS), Decomposition techniques like Empirical Mode Decomposition (EMD), and its variants like Ensemble Empirical Mode Decomposition (EEMD), and Complete Ensemble Empirical Mode Decomposition with Additive Noise (CEEMDAN). The Robust Set Membership Affine Projection (RSMAP) Algorithm is deployed for the enhancement of the obtained fECG signal.
    RESULTS: The results show significant improvements in the elicited fECG signal with a maximum Signal Noise Ratio (SNR) of 31.72 dB and correlation coefficient = 0.899, Maximum Heart Rate(MHR) obtained in the range of 108-142 bpm for all the records of abdominal ECG signals. The statistical test gave a p-value of 0.21 accepting the null hypothesis. The Abdominal and Direct Fetal Electrocardiogram Database (ABDFECGDB) from PhysioNet has been used for this analysis.
    CONCLUSIONS: The proposed framework demonstrates a robust and effective method for the elicitation and enhancement of fECG signals from the abdominal recordings.
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  • 文章类型: Journal Article
    简介:表面肌电图(sEMG)信号已广泛用于人体上肢力估计和运动意图识别。然而,当记录来自靠近心脏的肌肉的sEMG信号时,由心脏跳动产生的心电图(ECG)伪影是降低EMG信号质量的主要因素。被ECG伪影污染的sEMG信号很难被正确理解。本文的目的是通过一种新颖的方法有效地从sEMG信号中去除ECG伪影。方法:本文,肱二头肌的sEMG和ECG信号,肱肌,分别采集人体上肢的肱三头肌。首先,采用改进的多层小波变换算法对原始sEMG信号进行预处理,去除原始信号中的背景噪声和工频干扰。然后,基于盲源分离分析的理论,构造了一种改进的Fast-ICA算法来分离去噪信号。最后,使用ECG鉴别算法来发现和消除sEMG信号中的ECG信号。该方法包括以下步骤:1)采集原始sEMG和ECG信号;2)解耦原始sEMG信号;3)基于Fast-ICA的信号分量分离;4)ECG伪影识别与消除。结果与讨论:实验结果表明,我们的方法对从污染的EMG信号中去除ECG伪影具有良好的效果。它可以进一步提高肌电信号的质量,对于提高力估计和运动意图识别任务的准确性具有重要意义。与其他最先进的方法相比,我们的方法也可以为其他生物信号提供指导意义。
    Introduction: Surface electromyogram (sEMG) signals have been widely used in human upper limb force estimation and motion intention recognition. However, the electrocardiogram(ECG) artifact generated by the beating of the heart is a major factor that reduces the quality of the EMG signal when recording the sEMG signal from the muscle close to the heart. sEMG signals contaminated by ECG artifacts are difficult to be understood correctly. The objective of this paper is to effectively remove ECG artifacts from sEMG signals by a novel method. Methods: In this paper, sEMG and ECG signals of the biceps brachii, brachialis, and triceps muscle of the human upper limb will be collected respectively. Firstly, an improved multi-layer wavelet transform algorithm is used to preprocess the raw sEMG signal to remove the background noise and power frequency interference in the raw signal. Then, based on the theory of blind source separation analysis, an improved Fast-ICA algorithm was constructed to separate the denoising signals. Finally, an ECG discrimination algorithm was used to find and eliminate ECG signals in sEMG signals. This method consists of the following steps: 1) Acquisition of raw sEMG and ECG signals; 2) Decoupling the raw sEMG signal; 3) Fast-ICA-based signal component separation; 4) ECG artifact recognition and elimination. Results and discussion: The experimental results show that our method has a good effect on removing ECG artifacts from contaminated EMG signals. It can further improve the quality of EMG signals, which is of great significance for improving the accuracy of force estimation and motion intention recognition tasks. Compared with other state-of-the-art methods, our method can also provide the guiding significance for other biological signals.
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  • 文章类型: Journal Article
    本文提出了一种从孕妇腹部和胸部分析和提取心电图(ECG)信号的创新方法,主要目标是分离胎儿心电图(fECG)和母体心电图(mECG)信号。为了解决与fECG的低振幅相关的困难,信号采集过程中的各种噪声源,以及R波的重叠,我们开发了一种利用盲源分离技术提取心电信号的新方法。该方法基于独立分量分析算法,从腹部和胸部数据中检测并准确提取fECG和mECG信号。为了验证我们的方法,我们使用真实可靠的数据库进行了实验,以评估fECG提取算法。此外,为了展示实时适用性,我们在与测量血氧饱和度(SpO2)和体温的电子模块链接的嵌入式卡中实现了我们的方法,以及将数据传输到Web服务器。这使我们能够在移动应用程序中显示与胎儿及其母亲相关的所有信息,以帮助医生诊断胎儿的状况。我们的结果证明了我们的方法在困难条件下分离fECG和mECG信号以及计算不同心率(fBPM和mBPM)的有效性。这为改善怀孕期间的胎儿监测和孕产妇保健提供了有希望的前景。
    This article presents an innovative approach to analyzing and extracting electrocardiogram (ECG) signals from the abdomen and thorax of pregnant women, with the primary goal of isolating fetal ECG (fECG) and maternal ECG (mECG) signals. To resolve the difficulties related to the low amplitude of the fECG, various noise sources during signal acquisition, and the overlapping of R waves, we developed a new method for extracting ECG signals using blind source separation techniques. This method is based on independent component analysis algorithms to detect and accurately extract fECG and mECG signals from abdomen and thorax data. To validate our approach, we carried out experiments using a real and reliable database for the evaluation of fECG extraction algorithms. Moreover, to demonstrate real-time applicability, we implemented our method in an embedded card linked to electronic modules that measure blood oxygen saturation (SpO2) and body temperature, as well as the transmission of data to a web server. This enables us to present all information related to the fetus and its mother in a mobile application to assist doctors in diagnosing the fetus\'s condition. Our results demonstrate the effectiveness of our approach in isolating fECG and mECG signals under difficult conditions and also calculating different heart rates (fBPM and mBPM), which offers promising prospects for improving fetal monitoring and maternal healthcare during pregnancy.
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  • 文章类型: Journal Article
    Objective.用于独立分量分析(ICA)的扩展信息max算法可以分离亚高斯和超高斯信号,但由于使用随机梯度优化而收敛缓慢。在本文中,提出了一种改进的扩展infomax算法,该算法收敛速度更快。方法。通过用ICA解混合矩阵的基于完全乘法正交组的更新方案代替扩展信息的自然梯度学习规则来实现加速收敛,导致正交扩展信息max算法(OgExtInf)。将OgExtInf的计算性能与原始扩展信息和两种快速ICA算法进行了比较:流行的FastICA和Picard,属于拟牛顿方法家族的预条件有限内存Broyden-Fletcher-Goldfarb-Shanno(L-BFGS)算法。主要结果。OgExtInf的收敛速度比原始扩展的infomax快得多。对于小型脑电图(EEG)数据段,例如在在线脑电图处理中使用,OgExtInf也比FastICA和Picard更快。意义。OgExtInf可能对快速可靠的ICA有用,例如在癫痫发作和癫痫发作检测或脑机接口的在线系统中。
    Objective.The extended infomax algorithm for independent component analysis (ICA) can separate sub- and super-Gaussian signals but converges slowly as it uses stochastic gradient optimization. In this paper, an improved extended infomax algorithm is presented that converges much faster.Approach.Accelerated convergence is achieved by replacing the natural gradient learning rule of extended infomax by a fully-multiplicative orthogonal-group based update scheme of the ICA unmixing matrix, leading to an orthogonal extended infomax algorithm (OgExtInf). The computational performance of OgExtInf was compared with original extended infomax and with two fast ICA algorithms: the popular FastICA and Picard, a preconditioned limited-memory Broyden-Fletcher-Goldfarb-Shanno (L-BFGS) algorithm belonging to the family of quasi-Newton methods.Main results.OgExtInf converges much faster than original extended infomax. For small-size electroencephalogram (EEG) data segments, as used for example in online EEG processing, OgExtInf is also faster than FastICA and Picard.Significance.OgExtInf may be useful for fast and reliable ICA, e.g. in online systems for epileptic spike and seizure detection or brain-computer interfaces.
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  • 文章类型: Journal Article
    事件相关电位(ERP)的顶叶P300波与许多实验室任务中的各种心理操作有关。这项研究旨在将ERP的P3波分解为子成分,并将它们与行为参数联系起来,例如刺激-反应(S-R)链接和GO/NOGO反应的强度。EEG(31个通道),引用链接的耳朵,从172名健康成年人(107名女性)中记录,他们参加了两个提示GO/NOGO任务,S-R链接的强度是通过指令操纵的。在活动条件下观察到P300波,以响应提示,GO/NOGO刺激,在被动条件下,当不需要手动响应。利用电流源密度变换和盲源分离方法的组合,我们把P300波分解成两个不同的分量,据称起源于顶叶小叶的不同部分。顶叶中线分量的幅度(电流源在Pz附近)紧密地反映了主动的S-R链路的强度,reactive,被动条件。在动作选择抑制操作中,外侧顶叶分量的幅度(电流源在P3和P4附近)类似于基底神经节输出核的推拉活动。这些发现提供了对行动选择过程和S-R链接再激活的神经机制的见解。
    The parietal P300 wave of event-related potentials (ERPs) has been associated with various psychological operations in numerous laboratory tasks. This study aims to decompose the P3 wave of ERPs into subcomponents and link them with behavioral parameters, such as the strength of stimulus-response (S-R) links and GO/NOGO responses. EEGs (31 channels), referenced to linked ears, were recorded from 172 healthy adults (107 women) who participated in two cued GO/NOGO tasks, where the strength of S-R links was manipulated through instructions. P300 waves were observed in active conditions in response to cues, GO/NOGO stimuli, and in passive conditions when no manual response was required. Utilizing a combination of current source density transformation and blind source separation methods, we decomposed the P300 wave into two distinct components, purportedly originating from different parts of the parietal lobules. The amplitude of the parietal midline component (with current sources around Pz) closely mirrored the strength of the S-R link across proactive, reactive, and passive conditions. The amplitude of the lateral parietal component (with current sources around P3 and P4) resembled the push-pull activity of the output nuclei of the basal ganglia in action selection-inhibition operations. These findings provide insights into the neural mechanisms underlying action selection processes and the reactivation of S-R links.
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  • 文章类型: Journal Article
    利用表面肌电图(sEMG)进行控制,有必要对肌肉的神经驱动力进行实时估计,这涉及到EMG信号的实时分解。在本文中,我们提出了一种双向门递归单元(Bi-GRU)网络,并注意对高密度sEMG信号进行在线分解。该模型可以根据sEMG信号的不同部分的重要性,利用注意机制给予不同程度的注意。梯度卷积核补偿(gCKC)算法的输出作为训练标签,将模拟和实验的sEMG数据分为120个样本点的窗口进行模型训练,sEMG信号的采样率为2048Hz。我们测试了不同的注意力机制,并找出了可以带来模型中F1得分最高的机制。模拟的sEMG信号由Fuglevand方法合成(J.神经生理学。,1993).对于10个电机单元(MU)的分解,在模拟数据上训练的网络获得了0.974的平均F1分数(范围从0.96到0.98),并且在实验数据上训练的网络获得了0.876的平均F1分数(范围从0.82到0.97)。每个窗口的平均分解时间为28ms(范围为25.6ms至30.5ms),落在人类机电延迟的下限内。实验结果表明,采用Bi-GRU-Attention网络对电机单元进行实时分解是可行的。与gCKC算法相比,这被认为是医学领域的黄金标准,该模型牺牲了少量的精度,但通过消除计算互相关系矩阵和执行迭代计算的需要,显著提高了计算速度。
    To utilize surface electromyographics (sEMG) for control purposes, it is necessary to perform real-time estimation of the neural drive to the muscles, which involves real-time decomposition of the EMG signals. In this paper, we propose a Bidirectional Gate Recurrent Unit (Bi-GRU) network with attention to perform online decomposition of high-density sEMG signals. The model can give different levels of attention to different parts of the sEMG signal according to their importance using the attention mechanism. The output of gradient convolutional kernel compensation (gCKC) algorithm was used as the training label, and simulated and experimental sEMG data were divided into windows with 120 sample points for model training, the sampling rate of sEMG signal is 2048 Hz. We test different attention mechanisms and find out the ones that could bring the highest F1-score of the model. The simulated sEMG signal is synthesized from Fuglevand method (J. Neurophysiol., 1993). For the decomposition of 10 Motor Units (MUs), the network trained on simulated data achieved an average F1-score of 0.974 (range from 0.96 to 0.98), and the network trained on experimental data achieved an average F1-score of 0.876 (range from 0.82 to 0.97). The average decomposition time for each window was 28 ms (range from 25.6  ms to 30.5 ms), which falls within the lower bound of the human electromechanical delay. The experimental results show the feasibility of using Bi-GRU-Attention network for the real-time decomposition of Motor Units. Compared to the gCKC algorithm, which is considered the gold standard in the medical field, this model sacrifices a small amount of accuracy but significantly improves computational speed by eliminating the need for calculating the cross-correlation matrix and performing iterative computations.
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  • 文章类型: Journal Article
    头皮脑电图(EEG)的分析和解释对于跟踪和分析大脑活动至关重要。采集到的头皮脑电信号,然而,虚弱,经常被各种文物污染。基于深度学习的模型提供与传统技术相当的性能。然而,目前应用于头皮脑电降噪的深度学习网络规模大,存在过拟合问题。
    这里,我们提出了一种名为DPAE的双路径自编码器建模框架,用于头皮脑电信号去噪,并证明了该模型在多层感知器(MLP)上的优越性,卷积神经网络(CNN)和递归神经网络(RNN),分别。我们在基准头皮脑电图伪影数据集上验证了去噪性能。
    实验结果表明,我们的模型架构不仅显着减少了计算量,而且在相对均方根误差(RRMSE)度量方面优于现有的深度学习去噪算法,在时域和频域。
    DPAE架构不需要噪声分布的先验知识,也不受网络层结构的限制,这是一个面向盲源分离的通用网络模型。
    UNASSIGNED: Scalp electroencephalogram (EEG) analysis and interpretation are crucial for tracking and analyzing brain activity. The collected scalp EEG signals, however, are weak and frequently tainted with various sorts of artifacts. The models based on deep learning provide comparable performance with that of traditional techniques. However, current deep learning networks applied to scalp EEG noise reduction are large in scale and suffer from overfitting.
    UNASSIGNED: Here, we propose a dual-pathway autoencoder modeling framework named DPAE for scalp EEG signal denoising and demonstrate the superiority of the model on multi-layer perceptron (MLP), convolutional neural network (CNN) and recurrent neural network (RNN), respectively. We validate the denoising performance on benchmark scalp EEG artifact datasets.
    UNASSIGNED: The experimental results show that our model architecture not only significantly reduces the computational effort but also outperforms existing deep learning denoising algorithms in root relative mean square error (RRMSE)metrics, both in the time and frequency domains.
    UNASSIGNED: The DPAE architecture does not require a priori knowledge of the noise distribution nor is it limited by the network layer structure, which is a general network model oriented toward blind source separation.
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  • 文章类型: Journal Article
    目的:对癫痫发作和癫痫发作检测或脑-计算机接口的脑电图(EEG)分析可能会因存在伪影而受到严重阻碍。这项研究的目的是描述和评估一种快速自动算法,用于持续校正连续脑电图记录中的伪影,可以离线和在线应用。
    方法:持续校正伪影的自动算法基于快速盲源分离。它使用滑动窗口技术,在空间中具有重叠的时期和特征,时域和频域来检测和校正眼睛,心脏,肌肉和电力线工件。
    结果:该方法在对具有2035个标记伪影的公开连续EEG数据的独立评估研究中得到了验证。验证证实88%的伪影可以成功去除(眼部:81%,心脏:84%,肌肉:98%,电力线:100%)。在伪影减少率和计算时间方面,它都优于最先进的算法。
    结论:快速持续的伪影校正成功地去除了相当比例的伪影,同时保留大部分脑电图信号。
    结论:所提出的算法可能对正在进行的伪影校正有用,例如,用于癫痫发作和癫痫发作检测或脑机接口的在线系统。
    Analysis of the electroencephalogram (EEG) for epileptic spike and seizure detection or brain-computer interfaces can be severely hampered by the presence of artifacts. The aim of this study is to describe and evaluate a fast automatic algorithm for ongoing correction of artifacts in continuous EEG recordings, which can be applied offline and online.
    The automatic algorithm for ongoing correction of artifacts is based on fast blind source separation. It uses a sliding window technique with overlapping epochs and features in the spatial, temporal and frequency domain to detect and correct ocular, cardiac, muscle and powerline artifacts.
    The approach was validated in an independent evaluation study on publicly available continuous EEG data with 2035 marked artifacts. Validation confirmed that 88% of the artifacts could be removed successfully (ocular: 81%, cardiac: 84%, muscle: 98%, powerline: 100%). It outperformed state-of-the-art algorithms both in terms of artifact reduction rates and computation time.
    Fast ongoing artifact correction successfully removed a good proportion of artifacts, while preserving most of the EEG signals.
    The presented algorithm may be useful for ongoing correction of artifacts, e.g., in online systems for epileptic spike and seizure detection or brain-computer interfaces.
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  • 文章类型: Journal Article
    已观察到机械振动刺激(MVS)的有益效果,这主要归因于强直振动反射(TVR)。据报道,TVR在局部施加的振动期间会引起同步的电机单元激活。在称为功能力刺激(FFS)的新型振动系统中也观察到类似的效果。然而,由于在先前的分析中使用了全局肌电图(EMG)特征,因此对TVR在FFS中的表现表示怀疑。我们的研究旨在通过分析从高密度表面肌电图解码的运动单元尖峰序列,研究FFS对人类肱二头肌运动单元放电模式的影响。
    18名健康受试者自愿参加了不同幅度和频率的FFS训练。从肱二头肌记录了128个通道表面EMG,然后在运动伪影去除后进行解码。提取放电时间,并计算不同运动单位尖峰序列之间的相干性,以量化同步激活。
    在所有FFS试验中观察到振动周期和/或其整数倍内的显着同步,随着FFS振幅的增加而增加。我们的结果揭示了FFS涉及的基本生理机制,为将FFS分析和引入临床康复计划提供理论基础。
    UNASSIGNED: Beneficial effects have been observed for mechanical vibration stimulation (MVS), which are mainly attributed to tonic vibration reflex (TVR). TVR is reported to elicit synchronized motor unit activation during locally applied vibration. Similar effects are also observed in a novel vibration system referred to as functional force stimulation (FFS). However, the manifestation of TVR in FFS is doubted due to the use of global electromyography (EMG) features in previous analysis. Our study aims to investigate the effects of FFS on motor unit discharge patterns of the human biceps brachii by analyzing the motor unit spike trains decoded from the high-density surface EMG.
    UNASSIGNED: Eighteen healthy subjects volunteered in FFS training with different amplitudes and frequencies. One hundred and twenty-eight channel surface EMG was recorded from the biceps brachii and then decoded after motion-artifact removal. The discharge timings were extracted and the coherence between different motor unit spike trains was calculated to quantify synchronized activation.
    UNASSIGNED: Significant synchronization within the vibration cycle and/or its integer multiples is observed for all FFS trials, which increases with increased FFS amplitude. Our results reveal the basic physiological mechanism involved in FFS, providing a theoretical foundation for analyzing and introducing FFS into clinical rehabilitation programs.
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