Bipartite

二分
  • 文章类型: Journal Article
    许多细菌使用假氨基酸(Pse)或其他唾液酸样供体糖在丝氨酸或苏氨酸残基上糖基化鞭毛蛋白。通过保守的Maf型鞭毛蛋白糖基转移酶(fGT)成功重建Pse依赖性唾液酸化可能需要(a)缺失组分。这里,我们表征了革兰氏阴性细菌ShewanellaoneidensisMR-1中的两个Maf旁系同源物,并在异源宿主中重建了Pse依赖性糖基化。值得注意的是,我们发现了每个Maf的不同受体决定因素和靶标特异性。而Maf-1使用其C末端四肽重复(TPR)结构域赋予鞭毛蛋白受体和O-糖基化特异性,Maf-2需要新鉴定的保守特异性因子,糖基化因子Maf(GlfM),与鞭毛蛋白形成三元复合物。在革兰氏阴性和革兰氏阳性细菌中,GlfM直向同源物与Maf-2共同编码,并且在其四螺旋束中需要不变的天冬氨酸才能与Maf-2一起发挥作用。因此,融合的fGT进化是三方系统和双向系统中不同的鞭毛蛋白结合模式的基础,因此,受体丝氨酸残基与Pse的不同O-糖基化偏好。
    Many bacteria glycosylate flagellin on serine or threonine residues using pseudaminic acid (Pse) or other sialic acid-like donor sugars. Successful reconstitution of Pse-dependent sialylation by the conserved Maf-type flagellin glycosyltransferase (fGT) may require (a) missing component(s). Here, we characterize both Maf paralogs in the Gram-negative bacterium Shewanella oneidensis MR-1 and reconstitute Pse-dependent glycosylation in heterologous hosts. Remarkably, we uncovered distinct acceptor determinants and target specificities for each Maf. Whereas Maf-1 uses its C-terminal tetratricopeptide repeat (TPR) domain to confer flagellin acceptor and O-glycosylation specificity, Maf-2 requires the newly identified conserved specificity factor, glycosylation factor for Maf (GlfM), to form a ternary complex with flagellin. GlfM orthologs are co-encoded with Maf-2 in Gram-negative and Gram-positive bacteria and require an invariant aspartate in their four-helix bundle to function with Maf-2. Thus, convergent fGT evolution underlies distinct flagellin-binding modes in tripartite versus bipartite systems and, consequently, distinct O-glycosylation preferences of acceptor serine residues with Pse.
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  • 文章类型: Journal Article
    我们考虑基于底层二部图的随机几何超图模型。节点和超边缘在一个域中均匀采样,和一个节点被分配给那些位于一定半径内的超边缘。从建模的角度来看,我们解释了该模型如何捕获真实数据集中出现的高阶连接。我们的主要贡献是研究模型的连通性。在节点和超边缘的数量共同增长的渐近极限中,我们给出了一个保证连通性的半径条件。
    We consider a random geometric hypergraph model based on an underlying bipartite graph. Nodes and hyperedges are sampled uniformly in a domain, and a node is assigned to those hyperedges that lie within a certain radius. From a modelling perspective, we explain how the model captures higher-order connections that arise in real data sets. Our main contribution is to study the connectivity properties of the model. In an asymptotic limit where the number of nodes and hyperedges grow in tandem, we give a condition on the radius that guarantees connectivity.
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  • 文章类型: Journal Article
    叮咬蝇(双翅目)传播病原体,这些病原体在人类以及家畜和野生动物中引起许多重要疾病。将这些昆虫与宿主联系起来的摄食相互作用网络,以及它们在地理上如何变化,以及如何响应人类的土地使用,目前文献记录很少,但与理解跨物种疾病传播有关。我们从文献中编译了一个双翅目与宿主相互作用的数据库,以研究关键的相互作用网络指标在纬度上和人类土地利用上的变化。相互作用均匀度和H2'(网络特异性程度的度量)随纬度变化不明显。与接近自然的栖息地相比,互作均匀度在农业生境中显著较低,其中网络由相对较少的物种对主导,但是没有证据表明网络中人类及其驯养动物的存在导致了网络结构的系统性变化。我们讨论了这些结果的流行病学相关性以及对预测和减轻未来溢出事件的影响。
    Biting flies (Diptera) transmit pathogens that cause many important diseases in humans as well as domestic and wild animals. The networks of feeding interactions linking these insects to their hosts, and how they vary geographically and in response to human land-use, are currently poorly documented but are relevant to understanding cross-species disease transmission. We compiled a database of biting Diptera-host interactions from the literature to investigate how key interaction network metrics vary latitudinally and with human land-use. Interaction evenness and H2\' (a measure of the degree of network specificity) did not vary significantly with latitude. Compared to near-natural habitats, interaction evenness was significantly lower in agricultural habitats, where networks were dominated by relatively few species pairs, but there was no evidence that the presence of humans and their domesticated animals within networks led to systematic shifts in network structure. We discuss the epidemiological relevance of these results and the implications for predicting and mitigating future spill-over events.
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  • 文章类型: Journal Article
    Multipartite bacteria have one chromosome and one or more chromid. Chromids are believed to have properties that enhance genomic flexibility, making them a favored integration site for new genes. However, the mechanism by which chromosomes and chromids jointly contribute to this flexibility is not clear. To shed light on this, we analyzed the openness of chromosomes and chromids of the two bacteria, Vibrio and Pseudoalteromonas, both which belong to the Enterobacterales order of Gammaproteobacteria, and compared the genomic openness with that of monopartite genomes in the same order. We applied pangenome analysis, codon usage analysis and the HGTector software to detect horizontally transferred genes. Our findings suggest that the chromids of Vibrio and Pseudoalteromonas originated from two separate plasmid acquisition events. Bipartite genomes were found to be more open compared to monopartite. We found that the shell and cloud pangene categories drive the openness of bipartite genomes in Vibrio and Pseudoalteromonas. Based on this and our two recent studies, we propose a hypothesis that explains how chromids and the chromosome terminus region contribute to the genomic plasticity of bipartite genomes.
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  • 文章类型: Journal Article
    Cajanusscarabaeoides的黄色花叶病(L.)Thouars(CsYMD)在绿豆中的46%的C.scarabaeoides植物中观察到,来自恰蒂斯加尔邦22个地区的urdbean和鸽子豌豆田,印度,2017-2019年。症状的特征是在疾病的晚期阶段,绿叶上呈黄色马赛克,叶子呈黄色变色。严重感染的植物显示出节间长度缩短和叶片大小减小。CsYMD可通过粉虱(烟粉虱)传播给健康的C.scarabaeoides和Cajanuscajan。因此感染的植物在接种后的16和22天内在其叶片上出现典型的黄色马赛克症状,分别,提示了一种戊型病毒的病因.分子分析显示,该初生病毒具有由DNA-A(2729个核苷酸)和DNA-B(2630个核苷酸)组成的双向基因组。序列和系统发育分析表明,DNA-A成分的核苷酸序列与Rhyncha黄花叶病毒(RhYMV)(NC_038885)的DNA-A具有最高的同一性,为81.1%,其次是绿豆黄花叶病毒(MN602427)(75.3%)。DNA-B与RhYMV(NC_038886)的DNA-B的同一性最高,为74.0%。根据ICTV指南,该分离物与所报道的任何一种斑马病毒的DNA-A具有<91%的核苷酸同一性,因此,它被提议作为一种新的贝壳病毒物种,暂定名为Cajanusscarabaeoides黄色花叶病毒(CsYMV)。用CsYMV的DNA-A和DNA-B克隆进行农业接种后,接种(DAI)后8-10天,所有本氏烟草植物都出现了叶片卷曲症状和浅黄症状,虽然约60%的C.scarabaeoides植物出现了与18DAI田间观察到的类似的黄色马赛克症状,从而实现了科赫的假设。从这些农业感染的C.scarabaeoides植物中,CsYMV可被烟粉虱传播到健康的赤霉病菌植物中。除了这些主机,CsYMV还感染了绿豆和木豆,并引起了症状。
    Yellow mosaic disease of Cajanus scarabaeoides (L.) Thouars (CsYMD) was observed in up to 46% of C. scarabaeoides plants in the mungbean, urdbean, and pigeon pea fields from 22 districts of Chhattisgarh State, India, during 2017 to 2019. The symptoms were characterized by yellow mosaic on green leaves and yellow discoloration of leaves in advanced stages of the disease. Severely infected plants showed shortened internodal length and reduced leaf size. CsYMD was transmissible to healthy C. scarabaeoides and C. cajan by whitefly (Bemisia tabaci). The infected plants developed typical yellow mosaic symptoms on their leaves within 16 and 22 days of inoculation, respectively, suggesting a begomovirus etiology. Molecular analysis revealed that this begomovirus has a bipartite genome composed of DNA-A (2,729 nucleotides) and DNA-B (2,630 nucleotides). Sequence and phylogenetic analyses revealed that the nucleotide sequence of the DNA-A component had the highest identity of 81.1% with DNA-A of Rhynchosia yellow mosaic virus (RhYMV; NC_038885), followed by mungbean yellow mosaic virus (MN602427; 75.3%). DNA-B had the highest identity of 74.0% with DNA-B of RhYMV (NC_038886). As per ICTV guidelines, this isolate had <91% nucleotide identity with DNA-A of any of the begomoviruses reported; so, it is proposed as a new begomovirus species, tentatively named C. scarabaeoides yellow mosaic virus (CsYMV). After agroinoculation with DNA-A and DNA-B clones of CsYMV, all Nicotiana benthamiana plants developed leaf curl symptoms along with light yellowing symptoms 8 to 10 days after inoculation (DAI), while ∼60% of the C. scarabaeoides plants developed yellow mosaic symptoms similar to those observed in the field 18 DAI, thus fulfilling Koch\'s postulates. From these agro-infected C. scarabaeoides plants, CsYMV was transmissible to healthy C. scarabaeoides plants by B. tabaci. Apart from these hosts, CsYMV also infected and caused symptoms in mungbean and pigeon pea.
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  • 文章类型: Journal Article
    目的探讨滑车发育不良(TD)和髌骨类型与双侧髌骨(BP)的关系。材料与方法回顾性分析了在我院进行的5,081例膝关节MRI。有膝关节手术史的患者,以前或最近的创伤,和风湿病受累被排除在研究之外.对49例髌骨患者进行MRI检查。排除了三名患者:两名患者有三方变异,一个有多个骨发育不良的发现。总的来说,46例BP患者被纳入研究。BP被分类为I型,II,和III。根据二分片段和邻近髌骨内是否存在水肿,将患者分为有症状和无症状组。根据髌骨类型检查患者,滑车发育不良,结节-滑车沟(TT-TG)差,沟角,和沟深度。结果46例患者(男28例,女18例),平均年龄33±9.5岁,范围:18-54)。三十八段(82.6%)为III型,八段(17.4%)为II型。没有I型BP。17人(36.9%)有症状,29例(63.1%)无症状。II型中的7个(87.5%)和III型中的10个(26.3%)二分片段有症状。在有症状的患者中,滑车发育不良的频率和程度(分别为p=0.007和p=0.041)更高。症状组滑车沟角较高(p=0.007),滑车深度较低(p=0.006)。在TT-TG差异方面没有发现统计学上的显著差异(p=0.247)。III型和IV型髌骨在有症状组中更常见。结论目前的研究表明,髌股不稳定和髌骨类型与症状性BP有关。滑车发育不良患者,II型BP,和不成比例的髌骨小关节可能显著增加症状性BP的风险。
    Purpose The aim of this study is to investigate the relationship of trochlear dysplasia (TD) and patella type with bipartite patella (BP). Materials and methods A total of 5,081 knee MRIs taken in our institution were reviewed retrospectively. Patients with a history of knee surgery, previous or recent trauma, and rheumatologic involvement were excluded from the study. The MRIs of 49 patients with bipartite/multipartite patella were detected. Three patients were excluded: two patients had a tripartite variant, and one had multiple osseous dysplastic findings. Overall, 46 patients with BP were included in the study. BPs were classified as type I, II, and III. Patients were divided into symptomatic and asymptomatic groups according to the presence of edema within the bipartite fragment and adjacent patella. Patients were examined in terms of patella type, trochlear dysplasia, tuberosity-trochlear groove (TT-TG) difference, sulcus angle, and sulcus depth. Results There were 46 patients with BP (28 males and 18 females) (mean age: 33±9.5 years, range: 18-54). Thirty-eight bipartite fragments (82.6%) were type III and eight (17.4%) were type II. There was no type I BP. Seventeen (36.9%) were symptomatic, and 29 (63.1%) were asymptomatic. Seven of the type II (87.5%) and 10 of the type III (26.3%) bipartite fragments were symptomatic. The frequency and degree of trochlear dysplasia (p=0.007 and p=0.041, respectively) were found to be higher in symptomatic patients. The trochlear sulcus angle was higher (p=0.007) and the trochlear depth was lower (p=0.006) in the symptomatic group. No statistically significant difference was found (p=0.247) in terms of TT-TG difference. Type III and type IV patella were more common in the symptomatic group. Conclusion The current study shows that patellofemoral instability and patella type are associated with symptomatic BP. Patients with trochlear dysplasia, type II BP, and disproportionate patellar facet may have a significantly increased risk of symptomatic BP.
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  • 文章类型: Journal Article
    COVID-19大流行给所有社会群体的心理健康带来了新的挑战和关注,使心理健康变得越来越必要和重要。然而,人们只关注大学生的心理健康,教师的心理健康没有受到社会的广泛关注。高校教师是教师群体的中坚力量,大学生的心理健康不仅影响着教学质量和科研水平,而且对大学生的心理健康和人格发展起着重要的作用。
    在COVID-19大流行期间,网络教学是高校教师面临的重大挑战,尤其是英语老师。为此,本文提出了一种基于心理测验问卷及其结构特征的二分图卷积网络(BGCN)模型,用于识别心理健康危机。
    实验结果表明,所提出的BGCN模型在准确性上优于神经网络算法和其他机器学习算法,精度,F1,并可以很好地用于COVID-19时代英语教师的心理健康管理。
    UNASSIGNED: The COVID-19 pandemic has brought new challenges and attention to the mental health of all social groups, making mental health increasingly necessary and important. However, people only focus on the mental health of undergraduates, and the mental health of teachers has not received much attention from society. College teachers are the backbone of the teachers\' group, and their mental health not only affects the teaching quality and research level but also plays an important role in the mental health and personality development of undergraduates.
    UNASSIGNED: During the COVID-19 pandemic, online teaching is a major challenge for college teachers, especially English teachers. To this end, this article proposes a bipartite graph convolutional network (BGCN) model based on the psychological test questionnaire and its structural characteristics for the recognition of the mental health crisis.
    UNASSIGNED: Experimental results show that the proposed BGCN model is superior to neural network algorithms and other machine learning algorithms in accuracy, precision, F1, and recall and can be well used for the mental health management of English teachers in the era of COVID-19.
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  • 文章类型: Journal Article
    在动物和有袋哺乳动物中,胚胎植入和妊娠的部位是子宫。哺乳动物物种之间的子宫形态不同。例如,实验室小鼠有一个带有两个子宫角和一个子宫颈的两半子宫,而人类有一个单腔和单子宫颈的单纯形子宫。子宫的前体组织,输卵管,上阴道是苗勒管上皮及其邻近的间充质。在胚胎发生过程中,通过中线苗勒管融合的物种特异性差异,建立了物种之间的形态差异,增长,和差异化。在人类中,苗勒管发育的改变可导致子宫形态的变化,这与流产和不孕症的风险增加相关。在这里,我们回顾了调节苗勒管发育的发育遗传因素,子宫形态发生,和人类子宫变异。
    In eutherian and marsupial mammals, the site of embryo implantation and gestation is the uterus. Uterine morphologies vary between mammalian species. For example, laboratory mice have a bipartite uterus with two uterine horns and a single cervix, whereas humans have a simplex uterus with a single chamber and single cervix. The precursor tissue of the uterus, oviducts, and upper vagina is the Müllerian duct epithelium and its adjacent mesenchyme. Morphological variation between species is established during embryogenesis by species-specific differences in Müllerian duct fusion at the midline, growth, and differentiation. In humans, alterations in Müllerian duct development can lead to variations in uterine morphology that correlate with increased risks of miscarriage and infertility. Here we review the developmental genetic factors that regulate Müllerian duct development, uterine morphogenesis, and human uterine variation.
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  • 文章类型: Journal Article
    Bipartite negotiations are an effort to resolve disputes that the parties must take in advance, as mandated in Article 3 of Law Number 2 of 2004. Suppose there is an agreement in bipartite negotiations. In that case, these agreements are written into a collective contract that is then registered with an industrial relations court to obtain a registration certificate. However, collective agreements that have been agreed upon and registered and have executorial legal force are still being sued by one of the court parties. The purpose of this study is to obtain an overview and analyze the concept of procedural law regarding the implementation of collective agreements with legal certainty in terminating employment in Indonesia. This research is legal research using a statutory approach, a conceptual approach, and a case approach-the collection of material through the literature study method, with primary and secondary legal materials. Furthermore, the traditional fabric is studied and analyzed by the approaches used in this study to answer legal issues in this study. In this article, the author offers 2 (two) procedural law concepts regarding the implementation of collective agreements. First, a lawsuit for disputes that have been resolved through a cooperative agreement may not be accepted by the court, and the judge does not need to process the case further. Still, a file research process is sufficient to explore the main problem of the parties, if the problem is related to one of the parties breaking the promise by referring to the recorded evidence issued by the same court, the Panel of Judges is sufficient to hold a deliberation and only determine with a single judge that the case has been resolved and choose the order for execution. The second concept is that the lawsuit is still being processed. Still, it is only continued until the interim decision stage if, at the initial examination stage, it is known that the dispute has been resolved through a collective agreement. This is far more effective, efficient and fair, and provides legal certainty for the parties.
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  • 文章类型: Case Reports
    Bilateral bipartite lunate is a very rare congenital anomaly of the lunate. A 36-year-old military European male was referred to our service diagnosed with a lunate fracture. Symptoms began 3 months before our encounter, after falling on his outstretched left hand. The patient was misdiagnosed with a lunate fracture, therefore treated with a cast and then transitioned to a removable splint over 2 months in total; When the patient presented to our facility, on physical examination, he referred pain over the dorso-ulnar side of the wrist, especially the ulnar snuff. Tenderness to palpation over the fovea and positive triangular fibrocartilage complex axial compression test was encountered. Bilateral wrist X-rays were taken, and a diagnosis of bilateral bipartite lunate was made by our team. The patient was treated for ulnar-sided wrist pain with steroid injection and physical rehabilitation. A literature review on bipartite lunate was conducted, and cases share three basic common features: unilateral involvement, incidentally diagnosed after a traumatic event, and absence of positive clinical findings related to the bipartition.
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