Bio-assay

生物分析
  • 文章类型: Journal Article
    提出了一种新颖且高灵敏度的比色DNA传感器,用于测定阿托摩尔水平的miRNA-155,该传感器将铜纳米颗粒(CuNPs)的过氧化物酶样活性与杂交链反应(HCR)相结合。CuNPs的利用提供了与双链DNA的强相互作用等优势,优秀的分子识别,模拟催化活性。在这里,将捕获探针DNA(P1)固定在羧化磁珠(MB)上,允许放大固定由于3D表面。随后,当P2被引入修饰的P1/MB时,靶微小RNA-155的存在导致夹心结构(P2/微小RNA-155/P1/MBs)的形成。然后通过添加H1和H2来触发HCR反应以产生超级夹心(H1/H2)n。在此之后,Cu2+离子被吸引到(H1/H2)n的带负电荷的磷酸基,并被抗坏血酸还原,导致CuNPs的形成,嵌入(H1/H2)n的凹槽中。CuNPs的过氧化物酶样活性催化3,3',5,5'-四甲基联苯胺(TMB),导致在630nm处测量的明显的蓝色。在最优条件下,比色生物传感器对80至500aM的microRNA-155浓度表现出线性响应,检测限为22aM,并歧视其他microRNA。它也成功地应用于测定加标人血清中的microRNA-155水平。
    A novel and highly sensitive colorimetric DNA sensor for determination of miRNA-155 at attomolar levelsis presented that combines the peroxidase-like activity of copper nanoparticles (CuNPs) with the hybridization chain reaction (HCR) . The utilization of CuNPs offers advantages such as strong interaction with double-stranded DNA, excellent molecular recognition, and mimic catalytic activity. Herein, a capture probe DNA (P1) was immobilized on carboxylated magnetic beads (MBs), allowing for amplified immobilization due to the 3D surface. Subsequently, the presence of the target microRNA-155 led to the formation of a sandwich structure (P2/microRNA-155/P1/MBs) when P2 was introduced to the modified P1/MBs. The HCR reaction was then triggered by adding H1 and H2 to create a super sandwich (H1/H2)n. Following this, Cu2+ ions were attracted to the negatively charged phosphate groups of the (H1/H2)n and reduced by ascorbic acid, resulting in the formation of CuNPs, which were embedded into the grooves of the (H1/H2)n. The peroxidase-like activity of CuNPs catalyzed the oxidation reaction of 3,3\',5,5\'-Tetramethylbenzidine (TMB), resulting in a distinct blue color measured at 630 nm. Under optimal conditions, the colorimetric biosensor exhibited a linear response to microRNA-155 concentrations ranging from 80 to 500 aM, with a detection limit of 22 aM, and discriminate against other microRNAs. It was also successfully applied to the determination of microRNA-155 levels in spiked human serum.
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  • 文章类型: Journal Article
    The Mu opioid receptor (MOR) has been the subject of intense research over the past decades, especially in the field of analgesic therapeutics. It is the primary target for both clinical and recreational opioids. Recently, camelid-derived nanobodies have received significant attention due to their applicability in stabilizing the crystal structure of activated MOR, via specific recognition of and binding to the active receptor conformation. In the present study, we developed and applied a novel bio-assay to monitor MOR activation, utilizing intracellular expression of one such nanobody, Nb39. The principle of functional complementation of a split nanoluciferase was used to assess recruitment of Nb39 to MOR, following activation by a set of five synthetic opioids. The obtained pharmacological parameters-negative logarithm of EC50 (pEC50, as a measure of potency) and maximal response provoked by a ligand (Emax, as a measure of efficacy; relative to hydromorphone)-were compared with those obtained using a G protein recruitment assay, in which a mini-Gi protein (engineered GTPase domain of Gαi subunit) is recruited to activated MOR. Similar EC50 but distinct Emax values were obtained with both bio-assays, with lower Emax values for the Nb-based bio-assay. Both bio-assays may assist to gain better insight into activation of the MOR. Graphical abstract.
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  • 文章类型: Journal Article
    新精神活性物质(NPS)的前景在不断发展,随着新化合物不断进入非法药物市场。其中,阿片类NPS由于其高效能和患病率而构成威胁。而以前,芬太尼和芬太尼衍生物的使用是主要的关注点,立法已经做出了相应的反应,这可能是(ab)使用替代µ阿片受体(MOR)激动剂的驱动力。与芬太尼(类似物)相比,有关这些新型非芬太尼阿片类NPS的详细信息尚不清楚.我们调查了一组11个“替代品”的生物活性,新出现的MOR激动剂(2-甲基-AP-237,AP-237,溴,Brorphine,布托啡诺,异硝基苯,mitragynine,7-OH-mitragynine,MT-45,哌啶基硫代丁烯,和tianeptine)使用两个密切相关的体外MOR激活生物测定,监测G蛋白(mini-Gi),或β-arrestin2(βarr2)募集。获得了所有测试化合物的活性概况,效力值(EC50)范围为1.89nM(溴马多)至>3µM(AP-237和tianeptine)。Bromadol,Brorphine,异硝基苯,哌啶基硫代丁烯,tianeptine具有最高的疗效(Emax)值,超过参考化合物氢吗啡酮≥1.3倍(βarr2测定)和>2.6倍(mini-Gi测定)。关于两种不同的信号分子的募集的信息另外使得能够评估有偏倚的激动作用;所评估的阿片样物质中没有一个是显著有偏倚的。一起来看,这项研究首次系统地研究了MOR中出现的各种非芬太尼阿片类NPS的体外生物学活性。鉴于已知许多阿片类NPS(致命)中毒的危险,重要的是不断监测和表征新出现的化合物。
    The landscape of new psychoactive substances (NPS) is constantly evolving, with new compounds entering the illicit drug market at a continuous pace. Of these, opioid NPS form a threat given their high potency and prevalence. Whereas previously, the use of fentanyl and fentanyl derivatives was the main point of attention, legislations have reacted accordingly, which may have been a driving force towards the (ab)use of alternative µ-opioid receptor (MOR) agonists. In contrast to fentanyl (analogues), details on these novel non-fentanyl opioid NPS are scarce. We investigated the biological activity of a panel of 11 \'alternative\', newly emerging MOR agonists (2-methyl-AP-237, AP-237, bromadol, brorphine, butorphanol, isotonitazene, mitragynine, 7-OH-mitragynine, MT-45, piperidylthiambutene, and tianeptine) using two closely related in vitro MOR activation bio-assays, monitoring either G protein (mini-Gi), or β-arrestin2 (βarr2) recruitment. Activity profiles were obtained for all tested compounds, with values for potency (EC50) ranging from 1.89 nM (bromadol) to > 3 µM (AP-237 and tianeptine). Bromadol, brorphine, isotonitazene, piperidylthiambutene, and tianeptine had the highest efficacy (Emax) values, exceeding that of the reference compound hydromorphone ≥ 1.3-fold (βarr2 assay) and > 2.6-fold (mini-Gi assay). Information on the recruitment of two distinct signaling molecules additionally enabled evaluation of biased agonism; none of the evaluated opioids being significantly biased. Taken together, this study is the first to systematically investigate the in vitro biological activity of a diverse panel of emerging non-fentanyl opioid NPS at MOR. Given the known danger of (fatal) intoxications with many opioid NPS, it is important to continuously monitor and characterize newly emerging compounds.
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  • 文章类型: Journal Article
    芬太尼和吗啡是Mu阿片受体(MOR)的激动剂,它是GPCR家族的成员。它们的镇痛作用与不希望的副作用有关。在MOR下游的信令级别上,据推测,镇痛可能是通过G蛋白途径介导的,而阿片类药物的不良作用与β-抑制蛋白(βarr)途径有关。尽管是一个越来越争论的话题,对非法药物市场上出现的新型合成阿片类药物(NSO)(包括芬太尼类似物)的潜在“偏见”(即一种途径优先激活另一种途径)知之甚少。因此,我们开发并应用了一种小说,强大的生物测定平台研究21NSO的活性,评估这些MOR激动剂在多大程度上表现出偏倚的激动作用,并研究其与结构的潜在相关性。此外,我们评估了TRV130的功能选择性,TRV130是一种所谓的G蛋白偏向激动剂.我们在HEK293T细胞中应用了新建立的稳定生物测定法,基于分裂纳米电容酶的功能互补原理,通过募集mini-Gi蛋白(Gαi亚基的GTP酶结构域)或βarr2来评估MOR激活。在两种生物测定中,除两种外,所有测试的NSO均表现出MOR的浓度依赖性反应。开发的生物测定可以深入了解NSO的βarr2或G蛋白募集潜力,这最终可能有助于更好地理解为什么某些阿片类药物与更高的毒性相关。加上最近关于阿片类药物的偏见激动概念的相关性的讨论,我们没有观察到任何被评估化合物的显著偏差,包括TRV130。
    Fentanyl and morphine are agonists of the Mu opioid receptor (MOR), which is a member of the GPCR family. Their analgesic effects are associated with unwanted side effects. On a signaling level downstream from MOR, it has been hypothesized that analgesia may be mediated through the G protein pathway, whereas the undesirable effects of opioids have been linked to the β-arrestin (βarr) pathway. Despite being an increasingly debated subject, little is known about a potential \'bias\' (i.e. the preferential activation of one pathway over the other) of the novel synthetic opioids (NSO) - including fentanyl analogs - that have emerged on the illegal drug market. We have therefore developed and applied a novel, robust bio-assay platform to study the activity of 21 NSO, to evaluate to what extent these MOR agonists show biased agonism and to investigate the potential correlation with their structure. In addition, we evaluated the functional selectivity of TRV130, a purported G protein-biased agonist. We applied newly established stable bio-assays in HEK293T cells, based on the principle of functional complementation of a split nanoluciferase, to assess MOR activation via recruitment of a mini-Gi protein (GTPase domain of Gαi subunit) or βarr2. All but two of the tested NSO demonstrated a concentration-dependent response at MOR in both bio-assays. The developed bio-assays allow to gain insight into the βarr2 or G protein recruitment potential of NSO, which may eventually help to better understand why certain opioids are associated with higher toxicity. Adding to the recent discussion about the relevance of the biased agonism concept for opioids, we did not observe a significant bias for any of the evaluated compounds, including TRV130.
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  • 文章类型: Journal Article
    Acinetobacter baumannii is a non-motile, gram-negative member of the gamma proteobacteria. A specific and sensitive approach was established for the detection of Acintobacter baumannii via DNA based bio-assay. In this study, gold nano-star was synthesized and used for bio-conjugation with pDNA toward the detection of target sequences. Synthesized probe (5\' TTG TGA ACT ATT TAC GTC AGC ATG C3\') of Acinetobacter baumannii was found with excellent sensitivity. After the hybridization of pDNA with cDNA, target DNA (5\' GCA TGC TGA CGT AAA TAG TTC ACA A 3\') was easily measured. According to ultra-sensitivity of the engineered optical DNA-based bio-assay, it is potentially applied in the bacterial detection of the environmental and clinical specimens. Here, the selection of engineered biosensor in the presence of two mismatch sequences was investigated. The results indicated an acceptable choice for DNA-based assays. The low limit of quantification (LLOQ) of genosensor was obtained as 1 fM. The present study is a very important diagnostic examination to recognize Acinetobacter baumannii, which can be a best alternative to the traditional methods.
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  • 文章类型: Journal Article
    流感嗜血杆菌(H.流感)是革兰氏阴性球杆菌病原微生物。H.流感产生β-内酰胺酶,它还能够修饰其青霉素结合蛋白,所以它对青霉素家族的抗生素产生了抗药性。在这项工作中,利用基于DNA的生物测定法建立了一种新的敏感方法来监测H.流感.第一次,将流感嗜血杆菌的巯基化探针的特定序列(SH-5'-AATTTTCCAACTTTTTCACCTGCAT-3')固定在金(Au)电极的表面上。在甲苯胺蓝(TB)溶液中进行方波伏安法(SWV),用于DNA杂交和靶向流感嗜血杆菌的cDNA序列。场扫描电子显微镜(FE-SEM)用于电极形态的研究和颗粒尺寸的估计。在最优条件下,计划的策略可以检测到低至1ZM的目标DNA(5'-ATGCAGGTGAAAAAGTTGGAAAATT-3'),线性范围为1μM至1ZM。此外,工程基因分析选择性地区分互补序列与靶序列,双和三碱基错配序列。
    Haemophilus influenza (H. influenza) is a gram negative coccobacillus pathogenic microorganism. H. influenza produces beta-lactamases, and it is also able to modify its penicillin-binding proteins, so it has gained resistance to the penicillin family of antibiotics. In this work, a novel sensitive approach was established for the monitoring of H. influenza using DNA based bio-assay. For the first time, specific sequence of thiolated probe of Haemophilus influenza (SH-5\'-AAT TTT CCA ACT TTT TCA CCT GCA T-3\') was immobilized on the surface of gold (Au) electrode. Square wave voltammetry (SWV) was carried out in toluidine blue (TB) solution for DNA hybridization and targeting of cDNA sequence of Haemophilus influenza. Field scanning electron microscope (FE-SEM) was applied to investigation of the electrode morphology and estimate of particle size. In the optimal conditions, the planned strategy could detect target DNA (5\'-ATG CAG GTG AAA AAG TTG GAA AAT T-3\') down to 1 ZM with a linear range from 1 μM to 1 ZM. Moreover, engineered geno-assay selectively differentiates the complementary sequence from target sequences with one, double and three base mismatch sequences.
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  • 文章类型: Journal Article
    根据《欧洲药典》专论1038(纯病科),顺势疗法制剂是通过连续稀释和打击步骤产生的。稀释水平超过阿伏伽德罗的限制,然而,根据标准的科学知识,使特定的效果令人难以置信。因此,我们对根据本专著制作的制剂进行的重要实证研究感兴趣。在一项前体研究中,我们开发了一种基于指纹代谢组学分析的生物测定法,该分析是在顺势疗法制剂或对照中以盲法和随机分配的方式在体外发芽。前体研究的结果与金属锡30x制剂的作用与安慰剂相同的假设不一致。在本研究中,我们在仔细检查和优化实验程序后研究了这些效果的可重复性。在两个独立的实验室中以盲法和随机分配进行了十个独立的实验。此外,在两个实验室中进行了10个系统的负水控制实验,以严格评估实验装置的稳定性。再现了金属锡30x处理的效果。系统阴性对照实验没有产生假阳性结果,表明稳定的实验设置。因此,我们反复观察到的生物学效应与金属锡30x与安慰剂相同的假设相冲突。因此,我们希望讨论这些发现是否被视为科学异常,或者它们是否可能刺激进一步的研究,以阐明欧洲药典专论1038的应用是否可能导致具有特定作用的药物制剂。
    According to the European Pharmacopoeia monograph 1038 (Praeparationes homoeopathicae), homeopathic preparations are produced by successive dilution and succussion steps. Dilution levels beyond Avogadro\'s limit, however, render specific effects implausible according to standard scientific knowledge. Accordingly, we were interested in a critical empirical investigation of preparations produced according to this monograph. Within a precursor study we developed a bioassay based on a fingerprint metabolomic analysis of Lepidium sativum seeds germinated in vitro in either homeopathic preparations or controls in a blinded and randomized assignment. Results of the precursor study were not consistent with the hypothesis that the effects of a Stannum metallicum 30x preparation are identical to placebo. In the present study we investigated the reproducibility of these effects after scrutinizing and optimizing experimental procedures. Ten independent experiments were performed in a blinded and randomized assignment in two independent laboratories. Additionally, 10 systematic negative water control experiments were performed in both laboratories to critically assess the stability of the experimental set-up. The effects of the Stannum metallicum 30x treatment were reproduced. The systematic negative control experiments did not yield false-positive results, indicating a stable experimental set-up. We thus repeatedly observed biological effects conflicting with the assumption that Stannum metallicum 30x is identical to placebo. We therefore wish to discuss whether these findings are to be considered a scientific anomaly or whether they might stimulate further investigations to clarify whether application of the European Pharmacopoeia monograph 1038 may result in pharmaceutical preparations with specific effects.
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  • 文章类型: Journal Article
    今天,社区相关疾病的抗药性或多重抗药性现象的出现是世界上一个主要问题。在这些背景下,慢性传染病,麻风病,由一种叫做麻风分枝杆菌或麻风分枝杆菌的缓慢生长的细菌所支撑,是导致严重毁容性皮肤溃疡和手臂神经损伤的主要原因,腿,和身体周围的皮肤区域。甚至,每年有超过20万例新麻风病例与复发麻风病例一起统计。尽管如此,长期使用高剂量的多药治疗(MDT)被认为是可治愈的疾病.高剂量联合用药的长期作用可能会导致不良反应,从而显着影响患者的依从性。特别是感染者多重耐药性的爆发。为了克服这些不足或防止与阻力相关的问题,研究人员正在努力参与临床使用的抗麻风药物或相关化合物的结构修饰,以进行结构-抗分枝杆菌活性关系研究。这篇综述文章描述了几个研究小组报道的不同抗麻风化合物的详细合成和生物测定。
    Today, the emergence of the phenomenon of drug or multidrug-resistance for community-associated diseases represents a major concern in the world. In these contexts, the chronic infectious disease, leprosy, grounded by a slow-growing bacterium called Mycobacterium leprae or Mycobacterium lepromatosis is a leadingcause of severe disfiguring skin sores and nerve damage in the arms, legs, and skin areas around the body. Even, over 200,000 new leprosy cases are being accounted every year along with the relapsed leprosy cases. Nonetheless, this has been considered a curable disease with a higher dose of multidrug therapy (MDT) for a long period of time. The prolonged action of a high dose of combination drugs administration may cause an adverse reaction that can significantly affect patient compliance, particularly the outbreak of multidrug-resistance in the infected person. To overcome these shortfalls or prevent the resistance-associated problems, researchers are diligently involved in the structural modifications of the clinically used anti-leprosy drugs or the allied compounds for the structure-antimycobacterial activity relationship study. This review article described the detailed synthesis and biological assays of different anti-leprosy compounds reported by several research groups.
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  • 文章类型: Journal Article
    吲哚和吲哚为基础的合成大麻素受体激动剂(SCRAs),具有缬氨酸或叔亮氨酸取代基,通常被滥用的新精神活性物质(NPS)。这些SCRAs的主要代谢途径是末端酰胺或甲酯官能团的水解。虽然这些水解产物已经在一些“法律高点”被检测为主要成分,“这些代谢物通常特征不佳。这里,我们报告了对15种SCRA的7种常见水解代谢物的活性的系统研究,这些代谢物具有基于L-缬氨酸或L-叔亮氨酸的支架,并与它们的母体化合物进行了直接比较。基于活性的大麻素受体1(CB1)生物测定用于稳定的HEK293T细胞系统中SCRA及其代谢物的活性分析。通过添加(推定的)SCRA,可以激发β-arrestin2募集到活化的CB1(每个融合到分裂的纳米荧光素酶的一部分)。通过96孔板读数器监测功能互补的荧光素酶的发光。5F-AB-PINACA的主要水解代谢产物,亚行-CHMICA,ADB-CHMINACA,ADB-FUBICA,它们的甲酯和乙酯衍生物在高达1μM的浓度下没有可检测到的CB1活化。另一方面,5F-ADB-PINACA的代谢物,AB-CHMINACA,ADB-FUBINACA确实保持了活性,尽管与母体化合物相比显著降低(EC50值>100nM)。基于活性的SCRAs及其代谢物在CB1的表征不仅可以更好地了解SCRAs及其代谢物在中毒中的复杂相互作用,但也可以允许应用存在于生物流体中的“活性等价物”的概念,或者,或者,在没收的材料中。
    Indole- and indazole-based synthetic cannabinoid receptor agonists (SCRAs), featuring valine or tert-leucine substituents, are commonly abused new psychoactive substances (NPS). A major metabolic pathway for these SCRAs is hydrolysis of the terminal amide or methylester functionalities. Although these hydrolysis products were already detected as main ingredients in some \"legal highs,\" these metabolites are often poorly characterized. Here, we report a systematic investigation of the activity of 7 common hydrolysis metabolites of 15 SCRAs featuring scaffolds based on L-valine or L-tert-leucine in direct comparison to their parent compounds. An activity-based cannabinoid receptor 1 (CB1 ) bio-assay was used for activity profiling of SCRAs and their metabolites in a stable HEK293T cell system. The recruitment of β-arrestin2 to the activated CB1 (each fused to one part of a split Nanoluciferase) was provoked by adding the (putative) SCRAs. Luminescence of the functionally complemented luciferase was monitored by a 96-well plate-reader. The major hydrolysis metabolites of 5F-AB-PINACA, ADB-CHMICA, ADB-CHMINACA, ADB-FUBICA, and their methyl- and ethylester derivatives showed no detectable CB1 activation at concentrations up to 1 μM. On the other hand, metabolites of 5F-ADB-PINACA, AB-CHMINACA, and ADB-FUBINACA did retain activity, although significantly reduced as compared to the parent compounds (EC50 values >100 nM). Activity-based characterization of SCRAs and their metabolites at CB1 may not only allow a better insight into the complex interplay between SCRAs and their metabolites in intoxications, but may also allow application of the concept of \"activity equivalents\" present in biological fluids or, alternatively, in confiscated materials.
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  • 文章类型: Journal Article
    使用铜纳米颗粒(NPs)在2丙醇中的金属胶体,采用化学液相沉积法制备镍和钴。通过透射电子显微镜(TEM)表征所得胶态分散体。胶体负载在壳聚糖中。然后,使用大肠杆菌和金黄色葡萄球菌进行微生物学测定,以确定用壳聚糖捕获或螯合的纳米颗粒(NP)的杀菌剂/抑菌活性。最后,金属胶体Cu的毒性,测试Ni和Co。在三种不同的动物物种中进行生物测定。首先在地球上加热(Eiseniafoetida)以评估壳聚糖在乳酸(1%和0.5%)中的毒性和生物相容性。其次,在鱼类(虹鳟鱼)中进行生物测定,评估了NPs在体内的肝毒性。最后,在体重为100g的Sprange-Dawley大鼠中进行了生物测定,腹腔注射不同的壳聚糖金属胶体溶液。然后,确定了铜的最小和最大浓度,镍和钴。使用壳聚糖的目的是作为一些磁性NP的载体,这种毒性将允许获得具有潜在应用的新型聚合物材料作为磁体未来的药物载体。
    Metal colloids in 2 propanol using nanoparticles (NPs) of copper, nickel and cobalt were prepared by Chemical Liquid Deposition (CLD) method. The resulting colloidal dispersions were characterized by Transmission Electron Microscopy (TEM). The colloids were supported in chitosan. Then, microbiological assays were performed using E. coli and S. aureus in order to determine the bactericide/bacteriostatic activity of nanoparticles (NPs) trapped or chelated with chitosan. Finally, the toxicity of the metal colloids Cu, Ni and Co was tested. Bio-assays were conducted in three different animal species. First of all on earth warms (Eisenia foetida) to evaluate the toxicity and the biocompatibility of chitosan in lactic acid (1% and 0.5%). Secondly bio-assay done in fishes (rainbow trout), the liver toxicity of NPs in vivo was evaluated. Finally, a bio-assay was conducted in Sprange-Dawley rats of 100g weight, which were injected intraperitoneally with different solutions of chitosan metal colloids. Then, the minimum and maximum concentration were determined for copper, nickel and cobalt. The purpose of the use of chitosan was acting as a carrier for some magnetic NPs, which toxicity would allow to obtain new polymeric materials with potential applications as magnet future drugs carrier.
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